RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM46 (Homo sapiens)

Ensembl gene IDs: ENSG00000163462

Ensembl transcript IDs: ENST00000334634.9, ENST00000368382.5, ENST00000368383.7, ENST00000368385.8, ENST00000392451.6, ENST00000464760.5, ENST00000468878.1, ENST00000474430.5, ENST00000543729.5, ENST00000545012.5, ENST00000611379.1

Found 937 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGACAATAACAGCTGTTGCTCAGCACAGGCCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCCCAAC +
Preference number: 1 (lower is better)
Translates to: MTITAVAQHRPSRAH*RGTAAGTRGLAWPN
Trigger: GTTGGGCCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGGCCTGTGCTGAGCAACAGCTGTTATTGTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR GCA 90 bp CTTCCCCTCACCAGGAATGCCTGGACAGCGTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCT +
Preference number: 1 (lower is better)
Translates to: LPLTRNAWTASSPKA*LSQGCSSASTGQGA
Trigger: AGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR GCA 90 bp TGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGT +
Preference number: 1 (lower is better)
Translates to: CAGAHLHCIRRSRPC*SRGHAAHTQSPCRG
Trigger: ACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
3UTR CCA 90 bp GACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATaGTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTT +
Preference number: 1 (lower is better)
Translates to: DTDAWRDGVLIQSDR*LEGSRDGSLFYHPF
Trigger: AAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR TCA 90 bp AAGAAAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTaGCAGATGGTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCA +
Preference number: 1 (lower is better)
Translates to: KKGHRCLERWCVDPE*QMVGRKQRWLPLLS
Trigger: TGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR CAA 90 bp CTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTaGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGTCC +
Preference number: 2 (lower is better)
Translates to: LAEPTAGGRQRAPEA*PGPTQWEHPDSAGS
Trigger: GGACCCAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWTPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGCTCTCTCCATGGCTTaGGTAACATGCCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWALSMA*VTCQRQ
Trigger: CTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARAAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGTGGGGGTGGGGGCCTaGCTAACAAGCAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTVGVGA*LTSNGE
Trigger: CTCTCCATTGCTTGTTAGCCAGGCCCCCACCCCCAC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGTGGGGGTGGGGGCCTaGCTAACAAGCAATGGAGAG +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARAVGVGA*LTSNGE
Trigger: CTCTCCATTGCTTGTTAGCCAGGCCCCCACCCCCAC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR TCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARALANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGCTCTCTCCATGGCTTaGGTAACATGCCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTALSMA*VTCQRQ
Trigger: CTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKLTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKASSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 2 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGCAGAAGAGAGCCCCTaGGTCAAGAGAAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARAAEESP*VKRKLW
Trigger: CCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKLANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 2 (lower is better)
Translates to: PKAVVQHQQGRELGRARAMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCTCTCTCCATGGCTTaGGTAACATGCCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKALSMA*VTCQRQ
Trigger: CTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 2 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGAAGAGAGCCCCTaGGTCAAGAGAAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKAEESP*VKRKLW
Trigger: CCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGCTCTCTCCATGGCTTaGGTAACATGCCAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHALSMA*VTCQRQ
Trigger: CTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR TCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATACCCTAGCAAGTCTGTaGTCCACTTGCCACCCCTTC +
Preference number: 2 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHTLASL*STCHPF
Trigger: GAAGGGGTGGCAAGTGGAGCACAGACTTGCTAGGGT...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 2 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQPSRAH*RGTAAG
Trigger: GCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR CAA 90 bp ACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTaGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: TDAWRDGVLIQSDRW*EGSRDGSLFYHPFP
Trigger: GGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR CAA 90 bp GGAGTGTTAGGAAGAAAGGACACAGATGCTTGGAGAGATGGTGTGTaGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATGGCTCC +
Preference number: 2 (lower is better)
Translates to: GVLGRKDTDAWRDGV*IQSDRWLEGSRDGS
Trigger: GGAGCCATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTTTCTTCCTAACACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR TCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATCCACACGACATGCTCTaGAAATCAGTCCTCAAAAGC +
Preference number: 2 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDPHDML*KSVLKS
Trigger: GCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGG...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCATGGTAGGAGAGTTTaGGGGAGAAGCTGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQHGRRV*GRSCQG
Trigger: CCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 2 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLRVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGGAGACTTGGCACATaGGCATGGGTGTGGGACAGG +
Preference number: 3 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGRLGT*AWVWDR
Trigger: CCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR GCA 72 bp CCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTaGCTGGCCCAACCCAATGGGAACACCCAGACTCAG +
Preference number: 3 (lower is better)
Translates to: PLQGDGSGHQRP*LAQPNGNTQTQ
Trigger: CTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR CCA 72 bp TGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTaGCCCAACCCAATGGGAACACCCAGACTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: CRGTAAGTRGLA*PNPMGTPRLSW
Trigger: CCAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGSLHG*GNMPKA
Trigger: TGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR GCA 72 bp GCAGGGCCACATGGTAGGAGAGTTTGGGGGAGAAGCTaGCAGGGGGTAACAACCGGGTGCCAAGAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: AGPHGRRVWGRS*QGVTTGCQEVW
Trigger: CCAAACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATGTGGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR GCA 72 bp GCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCACATACACAGAGCCCG +
Preference number: 3 (lower is better)
Translates to: AHLHCIRRSRPC*SRGHAAHTQSP
Trigger: CGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
3UTR GCA 72 bp ACCAGGAATGCCTGGACAGCGTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGTTCAGCATCAACAGGG +
Preference number: 3 (lower is better)
Translates to: TRNAWTASSPKA*LSQGCSSASTG
Trigger: CCCTGTTGATGCTGAACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGACGCTGTCCAGGCATTCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR CCA 72 bp TGGGCAGAAGAGAGCCCCTGGGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGAAGGAGCAGGGCCACA +
Preference number: 3 (lower is better)
Translates to: WAEESPWVKRKL*EDRHGRRSRAT
Trigger: TGTGGCCCTGCTCCTTCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHGSLHG*GNMPKA
Trigger: TGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR TCA 72 bp GAAGAAAGGACACAGATGCTTGGAGAGATGGTGTGTTaGTCCAGAGTGACAGATGGTTGGAAGGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: EERTQMLGEMVC*SRVTDGWKEAE
Trigger: CTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
3UTR-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGAGACTTGGCACATaGGCATGGGTGTGGGACAGG +
Preference number: 3 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGRLGT*AWVWDR
Trigger: CCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR TCA 72 bp CCGCATCCGGCTAAGGGAAGAATTTTAAGATACGGGTaGAGGAGGTCTTGGAGAGCAAAGGTTTTATGGAGA +
Preference number: 3 (lower is better)
Translates to: PHPAKGRILRYG*RRSWRAKVLWR
Trigger: TCTCCATAAAACCTTTGCTCTCCAAGACCTCCTTCACCCGTATCTTAAAATTCTTCCCTTAGCCGGATGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAGCCCCCGCACCAGCTaGGACACCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSPRTS*DTSSLA
Trigger: GGCCAAGGAGGAGGTGTCGCAGCTGGTGCGGGGGCT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWQPLSA*APAAIE
Trigger: CTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGLVAAADTQHIHRARVGAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...CCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGTCGTACCTGGGGCTaGTCACATCGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGRTWG*SHRGHP
Trigger: AGGGTGCCCCCGATGTGATCAGCCCCAGGTACGACC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGACCCCAGGTCTGCATaGGGGGCCTGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWDPRSA*GAWKAQ
Trigger: CTGAGCCTTCCAGGCCCCTCATGCAGACCTGGGGTC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGCGACGCCTCCACTGTaGCATCCTCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWATPPL*HPRHRC
Trigger: ACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLCSRL*GHPSLS
Trigger: TGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGACTGGTGTGATCTTGTaGCCGCTGTGGGTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWTGVIL*PLWVRR
Trigger: GCGGCGCACCCACAGCGGGCACAAGATCACACCAGT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGGTGTGAGGAGGGCTaGGGGTTGAGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGCEEG*GLRCHC
Trigger: GCAGTGACACCTCAACCCCCAGCCCTCCTCACACCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWRPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGTCGTACCTGGGGCTaGTCACATCGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGRTWG*SHRGHP
Trigger: AGGGTGCCCCCGATGTGATCAGCCCCAGGTACGACC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGACCCCAGGTCTGCATaGGGGGCCTGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEDPRSA*GAWKAQ
Trigger: CTGAGCCTTCCAGGCCCCTCATGCAGACCTGGGGTC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCATATCCTCACCCTCTaGCATGGCCCTACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWHILTL*HGPTVP
Trigger: GGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWRAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTATCGAGGAAGAAGTaGAGGACAGGTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLSRKK*RTGAGG
Trigger: GCCCCCGGCACCTGTCCTGCACTTCTTCCTCGATAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGATGCCCAGGCGGGGTaGCAGGGGCACTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLDAQAG*QGHCAA
Trigger: GGCTGCACAGTGCCCCTGCCACCCCGCCTGGGCATC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGTGCCCACTGGCTCCTaGAGCTGTACTGCGCCACCC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEVPTGS*SCTAPP
Trigger: GGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCAC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGTGCCCGATCCCGGCTaGGGCTGCGAACCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VQVHIFTVFAVAGLVAAAVPDPG*GCEPRA
Trigger: AGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCAC...CGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGTGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGCGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: AGLVAAADTQHIHRARVGRASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...CCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: AGLVAAADTQHIHRARVGGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...CCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGGTTGAGGTGTCACTaGGCATGCTCCCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGLRCH*ACSRDQ
Trigger: CTGGTCCCGGGAGCATGCGCAGTGACACCTCAACCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCCTCACCCTCTGCCATaGCCCTACCGTGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTPHPLP*PYRARP
Trigger: CGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGAGGTGGGCTCGGAGCTaGGGTCCCCACCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERWARS*GPHHVL
Trigger: TAGGACATGGTGGGGACCCCAGCTCCGAGCCCACCT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HIFTVFAVAGLVAAADTQGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...CTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RCRGRVQVHIFTVFAVAGRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...GCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHETSTLR*QPVSSR
Trigger: CCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEDQVGG*VYGAGP
Trigger: TGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGACCAGAGGCCTTGCCTaGCCCAACCCAATGGGAACA +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWTRGLA*PNPMGT
Trigger: TGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTATGTCCCAAAGCACTaGTGCGGACCAGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWYVPKH*CGPVRP
Trigger: TGGACGCACTGGTCCGCATCAGTGCTTTGGGACATA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545012.5
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGTGCCCGATCCCGGCTaGGGCTGCGAACCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKVPDPG*GCEPRA
Trigger: AGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCAC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGTGCCCGATCCCGGCTaGGGCTGCGAACCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVVPDPG*GCEPRA
Trigger: AGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCAC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp ATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCTGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: IRRSRPCCSRGHAAHTQSCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...GCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTAGCCCCCGCACCAGCTaGGACACCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ADTQHIHRARVGVLKQGTSPRTS*DTSSLA
Trigger: GGCCAAGGAGGAGGTGTCGCAGCTGGTGCGGGGGCT...AGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTCCAGCAGGCTCCGGTaGTCCTGGATCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VPGACAGAHLHCIRRSRPSSRLR*SWIWAL
Trigger: CAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGA...AGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLVAAADTQHIHRARVGVRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...AACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHELLELY*ATPDEA
Trigger: TGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAPSRAH*RGTAAG
Trigger: GCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLRVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: AGLVAAADTQHIHRARVGLGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...CCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGGTCGTACCTGGGGCTaGTCACATCGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTGRTWG*SHRGHP
Trigger: AGGGTGCCCCCGATGTGATCAGCCCCAGGTACGACC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGTGCCCGATCCCGGCTaGGGCTGCGAACCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAVPDPG*GCEPRA
Trigger: AGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCAC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: VPGACAGAHLHCIRRSRPWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...AGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RTRSTYTEPVSGFSSRALAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...CAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWGVGMS*SSGSPL
Trigger: AAGAGGTGACCCACTACTGCAAGACATGCCAACGCC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTCCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ADTQHIHRARVGVLKQGTPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...AGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGAAGTGCAGGACAGGTaGCGGGGGCGTGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTEVQDR*RGRVQV
Trigger: CACCTGCACACGCCCCCGGCACCTGTCCTGCACTTC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQPSRAH*RGTAAG
Trigger: GCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTAGGTGGGCTCGGAGCTaGGGTCCCCACCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: GLVAAADTQHIHRARVGVRWARS*GPHHVL
Trigger: TAGGACATGGTGGGGACCCCAGCTCCGAGCCCACCT...AACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCCAGGCGGTCTGGCTTaGGGAGAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLPGGLA*GEFCGR
Trigger: TCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTCCAGGCGGTCTGGCTTaGGGAGAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: VPGACAGAHLHCIRRSRPPGGLA*GEFCGR
Trigger: TCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGG...AGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: PCCSRGHAAHTQSPCRGSPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...AGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: AADTQHIHRARVGVLKQGPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...GCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AGGTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RCRGRVQVHIFTVFAVAGGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...GCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTRVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp ATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: IFTVFAVAGLVAAADTQHILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...GTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRRPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp ACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACCCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: TVFAVAGLVAAADTQHIHPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...GTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGCGACGCCTCCACTGTaGCATCCTCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTATPPL*HPRHRC
Trigger: ACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGATGCCCAGGCGGGGTaGCAGGGGCACTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVDAQAG*QGHCAA
Trigger: GGCTGCACAGTGCCCCTGCCACCCCGCCTGGGCATC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGATGCCCAGGCGGGGTaGCAGGGGCACTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQDAQAG*QGHCAA
Trigger: GGCTGCACAGTGCCCCTGCCACCCCGCCTGGGCATC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGTGCCCACTGGCTCCTaGAGCTGTACTGCGCCACCC +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTVPTGS*SCTAPP
Trigger: GGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCAC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHELTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGACCAGAGGCCTTGCCTaGCCCAACCCAATGGGAACA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHETRGLA*PNPMGT
Trigger: TGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGACCCCAGGTCTGCATaGGGGGCCTGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARADPRSA*GAWKAQ
Trigger: CTGAGCCTTCCAGGCCCCTCATGCAGACCTGGGGTC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAGGAGGGCTGGGGGTTaGGGTGTCACTGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTRRAGG*GVTAHA
Trigger: AGCATGCGCAGTGACACCTCAACCCCCAGCCCTCCT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGACTGGTGTGATCTTGTaGCCGCTGTGGGTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VAAADTQHIHRARVGVLKTGVIL*PLWVRR
Trigger: GCGGCGCACCCACAGCGGGCACAAGATCACACCAGT...CTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCATCCAGCAGGCTCCGGTaGTCCTGGATCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARASSRLR*SWIWAL
Trigger: CAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGA...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHESCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRRAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKQPLSA*APAAIE
Trigger: CTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVQPLSA*APAAIE
Trigger: CTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACATAGTCCAGGCAGATaGCCAGGCGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAHSPGR*PGGVAG
Trigger: CCCTGCCACCCCGCCTGGGCATCTGCCTGGACTATG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKPSRAH*RGTAAG
Trigger: GCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACCTAGCAGAGCCCACTaGAGGGGGACGGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAPSRAH*RGTAAG
Trigger: GCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCTCACCCTCTGCCATaGCCCTACCGTGCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPHPLP*PYRARP
Trigger: CGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTGCCTGGCACACGTTGTaGGTACAGGGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: VPGACAGAHLHCIRRSRPAWHTL*VQGSTS
Trigger: ACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC...AGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLVAAADTQHIHRARVGVTLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...AACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp ACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TVFAVAGLVAAADTQHIHRVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...GTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWVCTVS*FPRMYV
Trigger: GACATACATCCTGGGAAACCAGGACACGGTACAGAC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGTCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLVAAADTQHIHRARVGSSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...CCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp ACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: TRSTYTEPVSGFSSRALVRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...CACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LVAAADTQHIHRARVGVLGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...GAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALCSRL*GHPSLS
Trigger: TGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHELANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGTGGGGGTGGGGGCCTaGCTAACAAGCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLVGVGA*LTSNGE
Trigger: CTCTCCATTGCTTGTTAGCCAGGCCCCCACCCCCAC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHESPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCGGGGGCCTCAGGCACTaGGGTGCTCCGGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ACAGAHLHCIRRSRPCCSGGLRH*GAPEQS
Trigger: ACTCTGCTCCGGAGCACCCCAGTGCCTGAGGCCCCC...GCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp AGGTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RCRGRVQVHIFTVFAVAGNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...GCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGCCCGACGCCCACCTTaGCCAAGTAGGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVARRPP*PSRRLG
Trigger: ACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGTCGTACCTGGGGCTaGTCACATCGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGRTWG*SHRGHP
Trigger: AGGGTGCCCCCGATGTGATCAGCCCCAGGTACGACC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGACCCCAGGTCTGCATaGGGGGCCTGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQDPRSA*GAWKAQ
Trigger: CTGAGCCTTCCAGGCCCCTCATGCAGACCTGGGGTC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGACCCCAGGTCTGCATaGGGGGCCTGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKDPRSA*GAWKAQ
Trigger: CTGAGCCTTCCAGGCCCCTCATGCAGACCTGGGGTC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGCTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: QPRTRSTYTEPVSGFSSRLVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...CCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCCAGCAGGCTCCGGTaGTCCTGGATCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSSRLR*SWIWAL
Trigger: CAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCCAGCAGGCTCCGGTaGTCCTGGATCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSSRLR*SWIWAL
Trigger: CAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGAAGTGCAGGACAGGTaGCGGGGGCGTGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVEVQDR*RGRVQV
Trigger: CACCTGCACACGCCCCCGGCACCTGTCCTGCACTTC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHQPLSA*APAAIE
Trigger: CTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGGCAGGGGCACTGTaGAGCCGGCTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKVAGAL*SRLWGH
Trigger: ATGGCCCCACAGCCGGCTGCACAGTGCCCCTGCCAC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGTGGCAGGGGCACTGTaGAGCCGGCTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAVAGAL*SRLWGH
Trigger: ATGGCCCCACAGCCGGCTGCACAGTGCCCCTGCCAC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAGTCCAGGCAGATaGCCAGGCGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKHSPGR*PGGVAG
Trigger: CCCTGCCACCCCGCCTGGGCATCTGCCTGGACTATG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGAGGACCCCAGGTCTaGATGAGGGGCCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGGPQV*MRGLEG
Trigger: GCCTTCCAGGCCCCTCATGCAGACCTGGGGTCCTCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGTCTCCATGTTCTTCATaGTGGTCTTGGTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWSPCSS*WSWSLS
Trigger: AGAGAGGGACCAAGACCAGCATGAAGAACATGGAGA...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392451.6
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGCCTGGCACACGTTGTaGGTACAGGGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTAWHTL*VQGSTS
Trigger: ACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGGTGGGCTCGGAGCTaGGGTCCCCACCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARARWARS*GPHHVL
Trigger: TAGGACATGGTGGGGACCCCAGCTCCGAGCCCACCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGCCAGGCGGTCTGGCTTaGGGAGAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWPGGLA*GEFCGR
Trigger: TCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGG...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: RTRSTYTEPVSGFSSRALSSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...CAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTSSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTTLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLTHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: RCRGRVQVHIFTVFAVAGTHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...GCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp ACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACTCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TVFAVAGLVAAADTQHIHSCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...GTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTCTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARLFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRLRCS*IWALRR
Trigger: CCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARARPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAQQGQP*NTPYCS
Trigger: CGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARADQVGG*VYGAGP
Trigger: TGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKLCSRL*GHPSLS
Trigger: TGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGCCATCCAGAGAGGTaGGCAGAAGAGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGHPER*AEESPW
Trigger: CCAGGGGCTCTCTTCTGCCCACCTCTCTGGATGGCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLTPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCCTGGCCCAACCCAATaGGAACACCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLPGPTQ*EHPDSA
Trigger: AGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGTCTTCATGCTGGTCTTaGTCCCTCTCTTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHESSCWS*SLSSQP
Trigger: TGGCTGCGAAGAGAGGGACCAAGACCAGCATGAAGA...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392451.6
CDS-3UTR TCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCCCGACGCCCACCTTaGCCAAGTAGGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKARRPP*PSRRLG
Trigger: ACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGCCCGACGCCCACCTTaGCCAAGTAGGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHARRPP*PSRRLG
Trigger: ACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGTCTTAACTCACACTaGTGCGGACCAGTGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGLNSH*CGPVRP
Trigger: TGGACGCACTGGTCCGCATCAGTGTGAGTTAAGACC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368382.5
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGGAGGGCTGGGGGTTaGGGTGTCACTGCGCATGCT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRRAGG*GVTAHA
Trigger: AGCATGCGCAGTGACACCTCAACCCCCAGCCCTCCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp CACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCATATCCTCACCCTCTaGCATGGCCCTACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: HIFTVFAVAGLVAAADTQHILTL*HGPTVP
Trigger: GGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATG...CTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHETDADQ*VHDGSE
Trigger: TTCACTTCCATCATGGACGCACTGGTCCGCATCAGT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACTGGTGTGATCTTGTaGCCGCTGTGGGTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTGVIL*PLWVRR
Trigger: GCGGCGCACCCACAGCGGGCACAAGATCACACCAGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGACTGGTGTGATCTTGTaGCCGCTGTGGGTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKTGVIL*PLWVRR
Trigger: GCGGCGCACCCACAGCGGGCACAAGATCACACCAGT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SRPCCSRGHAAHTQSPCRILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...CCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARARAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGCGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: HAAHTQSPCRGSQAGHWCEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...GCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGAAGTGCAGGACAGGTaGCGGGGGCGTGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAEVQDR*RGRVQV
Trigger: CACCTGCACACGCCCCCGGCACCTGTCCTGCACTTC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCATAGTCCAGGCAGATaGCCAGGCGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHHSPGR*PGGVAG
Trigger: CCCTGCCACCCCGCCTGGGCATCTGCCTGGACTATG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALLELY*ATPDEA
Trigger: TGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGCCCAGTGTTCCAGGTaGCCTCCCTCCCAATCAGCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQAQCSR*PPSQSA
Trigger: GGCTGATTGGGAGGGAGGGCACCTGGAACACTGGGC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAATCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGGTGTCACTGCGCATaGTCCCGGGACCAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRCHCA*SRDQPR
Trigger: TCGAGGCTGGTCCCGGGAGCATGCGCAGTGACACCT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGGTGTCACTGCGCATaGTCCCGGGACCAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRCHCA*SRDQPR
Trigger: TCGAGGCTGGTCCCGGGAGCATGCGCAGTGACACCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGGTGTGAGGAGGGCTaGGGGTTGAGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGCEEG*GLRCHC
Trigger: GCAGTGACACCTCAACCCCCAGCCCTCCTCACACCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCATCTCTTGACACACTaGGCACAGCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEHLLTH*AQQFLL
Trigger: GAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRPCCSRGHAAHTQSPCRTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...CCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGGCCTGGCACACGTTGTaGGTACAGGGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWAWHTL*VQGSTS
Trigger: ACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GAHLHCIRRSRPCCSRGHSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...GTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACAGGCGGGGGCTGCGGGTaGAAGGGGTGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTGGGCG*KGWRQE
Trigger: CTCCTGCCTCCACCCCTTCCACCCGCAGCCCCCGCC...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: AAADTQHIHRARVGVLKQGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARASSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGCCCGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RSTYTEPVSGFSSRALVPVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...GGGCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGCCGCTGCCAGCGGGTaGGGCCTGGCTGAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTAAASG*GLAEQA
Trigger: TGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQQQGQP*NTPYCS
Trigger: CGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKQQGQP*NTPYCS
Trigger: CGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVTSTLR*QPVSSR
Trigger: CCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTSTLR*QPVSSR
Trigger: CCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKDQVGG*VYGAGP
Trigger: TGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCGACGCCTCCACTGTaGCATCCTCGGCACCGCTGT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAATPPL*HPRHRC
Trigger: ACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKLCSRL*GHPSLS
Trigger: TGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGTGCCCACTGGCTCCTaGAGCTGTACTGCGCCACCC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHVPTGS*SCTAPP
Trigger: GGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCAC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCATGGTAGGAGAGTTTaGGGGAGAAGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTHGRRV*GRSCQG
Trigger: CCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCCTGGCCCAACCCAATaGGAACACCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTPGPTQ*EHPDSA
Trigger: AGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARCLYIS*HTGHSS
Trigger: ACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCA...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARANGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp GCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGCCCCCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AAHTQSPCRGSQAGHWCPHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...GGGGCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHPGSGR*DGPAAP
Trigger: AGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTGCGCCACCCCCGATaGAGCAAAAGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLRHPR*SKRQGT
Trigger: TGTGCCCTGCCTTTTGCTTCATCGGGGGTGGCGCAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACTGCGCCACCCCCGATaGAGCAAAAGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKLRHPR*SKRQGT
Trigger: TGTGCCCTGCCTTTTGCTTCATCGGGGGTGGCGCAG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACATATCCTCACCCTCTaGCATGGCCCTACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQHILTL*HGPTVP
Trigger: GGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: AVAGLVAAADTQHIHRARTDADQ*VHDGSE
Trigger: TTCACTTCCATCATGGACGCACTGGTCCGCATCAGT...ACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLMITWG*KAPRFL
Trigger: GAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCAT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKRASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCCCCTCACCAGGAATaGCTGGACAGCGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSPHQE*LDSVQP
Trigger: GGGCTGGACGCTGTCCAGGCATTCCTGGTGAGGGGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGTGTGAGGAGGGCTaGGGGTTGAGGTGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGCEEG*GLRCHC
Trigger: GCAGTGACACCTCAACCCCCAGCCCTCCTCACACCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334634.9
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGCCTGGCACACGTTGTaGGTACAGGGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQAWHTL*VQGSTS
Trigger: ACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCCTGGCACACGTTGTaGGTACAGGGCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAWHTL*VQGSTS
Trigger: ACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGGTGGGCTCGGAGCTaGGGTCCCCACCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARWARS*GPHHVL
Trigger: TAGGACATGGTGGGGACCCCAGCTCCGAGCCCACCT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACCAGGCGGTCTGGCTTaGGGAGAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAPGGLA*GEFCGR
Trigger: TCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCAGGCGGTCTGGCTTaGGGAGAGTTCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPGGLA*GEFCGR
Trigger: TCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARATHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp ATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACTGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: IFTVFAVAGLVAAADTQHWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...GTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAATCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKSCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKASCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALRTAR*SLLIAS
Trigger: GCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKQQGQP*NTPYCS
Trigger: CGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKATSTLR*QPVSSR
Trigger: CCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKADQVGG*VYGAGP
Trigger: TGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTSPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARATPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVLGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTRGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATGTGCCCGATCCCGGCTaGGGCTGCGAACCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDVPDPG*GCEPRA
Trigger: AGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCAC...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCATATCCTCACCCTCTaGCATGGCCCTACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHHILTL*HGPTVP
Trigger: GGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLMEVKV*ISSPSA
Trigger: GGCAGAGGGTGAGGATATGCAGACCTTCACTTCCAT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp CTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVAAADTQHIHRARVGVLMITWG*KAPRFL
Trigger: GAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCAT...GAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACATGTGCCCGCTGTGGGTaGGCCGCACCCGGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTCARCG*AAPGRV
Trigger: AACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACA...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp ACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TVFAVAGLVAAADTQHIHSCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...GTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTATCGAGGAAGAAGTaGAGGACAGGTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLSRKK*RTGAGG
Trigger: GCCCCCGGCACCTGTCCTGCACTTCTTCCTCGATAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTATCGAGGAAGAAGTaGAGGACAGGTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALSRKK*RTGAGG
Trigger: GCCCCCGGCACCTGTCCTGCACTTCTTCCTCGATAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAG +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTQPLSA*APAAIE
Trigger: CTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALLELY*ATPDEA
Trigger: TGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLLELY*ATPDEA
Trigger: TGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGGGTAACAACCGGGTaGCAAGAGGTTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGVTTG*QEVWGP
Trigger: TGGCCCCCAAACCTCTTGGCACCCGGTTGTTACCCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp GCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGAATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: AGAHLHCIRRSRPCCSRGITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...TCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKASSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKATLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHTLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAATGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARALFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGTCACCTCTTCCTTGTaGTCTGGGCACATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAVTSSL*SGHIRP
Trigger: GGGCCTTATGTGCCCAGACCACAAGGAAGAGGTGAC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGAGTCACCTCTTCCTTGTaGTCTGGGCACATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGAHLHCIRRSRPCCSRGVTSSL*SGHIRP
Trigger: GGGCCTTATGTGCCCAGACCACAAGGAAGAGGTGAC...TCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCATCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARASSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VQVHIFTVFAVAGLVAAASGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...CGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCATCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARASGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQLRTAR*SLLIAS
Trigger: GCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRLSAH*LLELYC
Trigger: GCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRLSAH*LLELYC
Trigger: GCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCATGGTAGGAGAGTTTaGGGGAGAAGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVHGRRV*GRSCQG
Trigger: CCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCGCAGAAGAGAGCCCCTaGGTCAAGAGAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTAEESP*VKRKLW
Trigger: CCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGC...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGTGGGGGTGGGGGCCTaGCTAACAAGCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHVGVGA*LTSNGE
Trigger: CTCTCCATTGCTTGTTAGCCAGGCCCCCACCCCCAC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQLTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKTPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACCTGGCCCAACCCAATaGGAACACCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQPGPTQ*EHPDSA
Trigger: AGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARARGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAAATGGCCTGAAGCAGTaGTGCCCGCTTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKNGLKQ*CPLLLQ
Trigger: CTGGAGGAGAAGCGGGCATCACTGCTTCAGGCCATT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGCCCGACGCCCACCTTaGCCAAGTAGGAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTARRPP*PSRRLG
Trigger: ACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAMITWG*KAPRFL
Trigger: GAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCAT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKLVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: VQVHIFTVFAVAGLVAAAGVGMS*SSGSPL
Trigger: AAGAGGTGACCCACTACTGCAAGACATGCCAACGCC...CGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACCACTCACCTCGGTGTaGCTCACGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTPLTSV*LTASSS
Trigger: GCTGGAGGAGGCCGTGAGGCACACCGAGGTGAGTGG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCCAGCAGGCTCCGGTaGTCCTGGATCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTSSRLR*SWIWAL
Trigger: CAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGA...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQSCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCGGTGCCGGGGGCGTGTaGAGGTGCACATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGGAGGV*RCTSSL
Trigger: CAGTGAAGATGTGCACCTGCACACGCCCCCGGCACC...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGTGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWWNTPY*SLVLAD
Trigger: ATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCA...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCATGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAWNTPY*SLVLAD
Trigger: ATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCA...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACAGAGCTGGAGATCATaGCCAGTGTTCCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKQSWRS*PVFQVP
Trigger: GGGCACCTGGAACACTGGGCATGATCTCCAGCTCTG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCCAGCCCCAAAGCCTaGCTGTCCCAAGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSSPKA*LSQGCS
Trigger: ACTACAGCCTTGGGACAGGCAGGCTTTGGGGCTGGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCATCTCTTGACACACTaGGCACAGCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VAAADTQHIHRARVGVLKHLLTH*AQQFLL
Trigger: GAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATG...CTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCAGGTGGGCTCGGAGCTaGGGTCCCCACCATGTCCTA +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGRWARS*GPHHVL
Trigger: TAGGACATGGTGGGGACCCCAGCTCCGAGCCCACCT...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAATGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVLFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGTCACCTCTTCCTTGTaGTCTGGGCACATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKVTSSL*SGHIRP
Trigger: GGGCCTTATGTGCCCAGACCACAAGGAAGAGGTGAC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALRTAR*SLLIAS
Trigger: GCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLRTAR*SLLIAS
Trigger: GCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGDQVGG*VYGAGP
Trigger: TGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTC...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCTCTTGCCCATGCCAATaGTTAGGAAAGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTSCPCQ*LGKRRV
Trigger: CACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGA...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKRLSAH*LLELYC
Trigger: GCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRLSAH*LLELYC
Trigger: GCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARLSAH*LLELYC
Trigger: GCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCATGGTAGGAGAGTTTaGGGGAGAAGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHHGRRV*GRSCQG
Trigger: CCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACATGGTAGGAGAGTTTaGGGGAGAAGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAHGRRV*GRSCQG
Trigger: CCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAACTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQLANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGCTCTCTCCATGGCTTaGGTAACATGCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAALSMA*VTCQRQ
Trigger: CTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTCACCAGGAATGCCTaGACAGCGTCCAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALTRNA*TASSPK
Trigger: TTTGGGGCTGGACGCTGTCCAGGCATTCCTGGTGAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKATPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAACACCCAGACTCAGCTaGGTCCCCAAGGGAGACTTG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKTPRLS*VPKGDL
Trigger: CAAGTCTCCCTTGGGGACCCAGCTGAGTCTGGGTGT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCCTGGCCCAACCCAATaGGAACACCCAGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHPGPTQ*EHPDSA
Trigger: AGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATACCAGAGGCCTTGCCTaGCCCAACCCAATGGGAACA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHTRGLA*PNPMGT
Trigger: TGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGAGGCAGAGATGTGCCTaGCATCACAGTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERQRCA*HHSLLF
Trigger: AAACAATAAACTGTGATGCCAGGCACATCTCTGCCT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKRGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATAAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FTVFAVAGLVAAADTQHIRGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...TATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HIFTVFAVAGLVAAADTQMEVKV*ISSPSA
Trigger: GGCAGAGGGTGAGGATATGCAGACCTTCACTTCCAT...CTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR GCA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWTDADQ*VHDGSE
Trigger: TTCACTTCCATCATGGACGCACTGGTCCGCATCAGT...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGVGMS*SSGSPL
Trigger: AAGAGGTGACCCACTACTGCAAGACATGCCAACGCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGAGCCCCCGCACCAGCTaGGACACCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLSPRTS*DTSSLA
Trigger: GGCCAAGGAGGAGGTGTCGCAGCTGGTGCGGGGGCT...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACGGGCCAGCCGCTCCTaGTGGCATTCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTRASRS*WHSSMA
Trigger: GGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKWNTPY*SLVLAD
Trigger: ATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCAGCTCCACATCACCTTaGCAGGCTGGGCACGGGAAC +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGSSTSP*QAGHGN
Trigger: GTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTSCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: CIRRSRPCCSRGHAAHTQVCTVS*FPRMYV
Trigger: GACATACATCCTGGGAAACCAGGACACGGTACAGAC...CTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAVCTVS*FPRMYV
Trigger: GACATACATCCTGGGAAACCAGGACACGGTACAGAC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAATCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKSSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDRCSWI*ALRRAS
Trigger: GCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCG...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACAGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTAGRNV*RASVAR
Trigger: CCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGC...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHRPTSS*QWRKEE
Trigger: CTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGT +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFPAGGA*LSRHIR
Trigger: ACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHQQGQP*NTPYCS
Trigger: CGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCAGAAGAGAGCCCCTaGGTCAAGAGAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKAEESP*VKRKLW
Trigger: CCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACTGGCTAACAAGCAATaGAGAGAACGGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKLANKQ*RERGPS
Trigger: GGATGGCCCCCGTTCTCTCCATTGCTTGTTAGCCAG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGAGACTTGGCACATTaGCATGGGTGTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGDLAH*HGCGTG
Trigger: ACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCCCCAAGGGAGACTTaGCACATTGGCATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSPRET*HIGMGV
Trigger: CACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
3UTR CAA 72 bp ACAGGACAGGGATGGAGAAGGGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCAGGTCATAGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: TGQGWRRGSLHG*GNMPKAGHRAD
Trigger: GTCTGCCCTATGACCTGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKCLYIS*HTGHSS
Trigger: ACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR TCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVCLYIS*HTGHSS
Trigger: ACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHRGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGCACCCGGCAGAGTTaGCATACCAGGCGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTRTRQS*HTRRWH
Trigger: ATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCG...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTGGTCTGACCTGGGGCTaGTCACATCGGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFGLTWG*SHRGHP
Trigger: AGGGTGCCCCCGATGTGATCAGCCCCAGGTCAGACC...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCCTTCCAGAGGGGTCTaGCCTGGGGCTGATCACATC +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHPSRGV*PGADHI
Trigger: GATGTGATCAGCCCCAGGTCAGACCCCTCTGGAAGG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQMEVKV*ISSPSA
Trigger: GGCAGAGGGTGAGGATATGCAGACCTTCACTTCCAT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTDADQ*VHDGSE
Trigger: TTCACTTCCATCATGGACGCACTGGTCCGCATCAGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTGCTGGGCCTTCTGGGTaGCCCAGGGGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFAGPSG*PRGGRA
Trigger: AGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGC...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAATCCTGTTGTGCAGCTaGTTGGCGGCTTGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKILLCS*LAACTK
Trigger: CTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGAT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATCGTAGCCGGCCTTGTTaGAGCCGCGGACACGCAGCA +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDRSRPC*SRGHAA
Trigger: TGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACG...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATGAAGTGCAGGACAGGTaGCGGGGGCGTGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDEVQDR*RGRVQV
Trigger: CACCTGCACACGCCCCCGGCACCTGTCCTGCACTTC...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACACTATCGAGGAAGAAGTaGAGGACAGGTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTLSRKK*RTGAGG
Trigger: GCCCCCGGCACCTGTCCTGCACTTCTTCCTCGATAG...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAWNTPY*SLVLAD
Trigger: ATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACATTGCCACCCCTTCTGTaGCCCTCACTCCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTLPPLL*PSLPPG
Trigger: TCCTGGTGGGAGTGAGGGGCACAGAAGGGGTGGCAA...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCATCTCTTGACACACTaGGCACAGCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVHLLTH*AQQFLL
Trigger: GAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHTLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCTGGGTGCCCCAGGGGTaGAAGAGCTTGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGWVPQG*KSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFRVGSC*AFWVPQ
Trigger: CTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKVCTVS*FPRMYV
Trigger: GACATACATCCTGGGAAACCAGGACACGGTACAGAC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCTTGCCCATGCCAATaGTTAGGAAAGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSCPCQ*LGKRRV
Trigger: CACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARAVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHCLYIS*HTGHSS
Trigger: ACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR TCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLIAHQT*AIQQAP
Trigger: CGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTAT...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAMEVKV*ISSPSA
Trigger: GGCAGAGGGTGAGGATATGCAGACCTTCACTTCCAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR GCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGG +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTLVVGA*TTGTGW
Trigger: CCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAG...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTTGGCGCGGCACTCTGTaGAGCCCTTGGTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFWRGTL*SPWWPL
Trigger: TAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCA...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATACTGGTGTGATCTTGTaGCCGCTGTGGGTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDTGVIL*PLWVRR
Trigger: GCGGCGCACCCACAGCGGGCACAAGATCACACCAGT...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGSCLAA*TKQGWS
Trigger: AGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCT...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTAT +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTEQAHP*AGTQRY
Trigger: ATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAATGGCTTGGGTAACATaGCAAAGGCAGGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAMAWVT*QRQVIG
Trigger: CCCTATGACCTGCCTTTGGCATGTTACCCAAGCCAT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGLFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGSGGLQ*LGQSCC
Trigger: ACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGA...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLGGRRS*QLAGMS
Trigger: AGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCC...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHLRTAR*SLLIAS
Trigger: GCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLTSTLR*QPVSSR
Trigger: CCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGT...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCTTGCCCATGCCAATaGTTAGGAAAGCGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSCPCQ*LGKRRV
Trigger: CACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACCCTGGAAACTTTCTTaGAGCTTGCTCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTPWKLS*SLLSSP
Trigger: CGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGG...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCAAAAGCCCTTTTGCTaGGCCCATGCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHQKPFC*AHASPG
Trigger: TCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCATATCCTCACCCTCTaGCATGGCCCTACCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFHILTL*HGPTVP
Trigger: GGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGMITWG*KAPRFL
Trigger: GAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCAT...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGCGGGCAATCCTGTTGTaGAGCTGCTTGGCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLRAILL*SCLAAC
Trigger: GCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCG...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATGGGGGCGTGTGCAGGTaGACATCTTCACTGTATTCG +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHGGVCR*TSSLYS
Trigger: CGAATACAGTGAAGATGTGCACCTGCACACGCCCCC...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATTCTCGGGCACAGGCCTaGCACACGTTGTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDSRAQA*HTLWVQ
Trigger: CTGTACCCACAACGTGTGCCAGGCCTGTGCCCGAGA...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCCCACACTCACACTCTaGCGGTACCGCTCCACCACA +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFPTLTL*RYRSTT
Trigger: TGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGTAGGCACTGAGCACTaGTGTGATCTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTVGTEH*CDLVPA
Trigger: AGCGGGCACAAGATCACACCAGTGCTCAGTGCCTAC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGTCAAGAGAAAACTGTaGGAAGACAGACACGGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHVKRKL*EDRHGR
Trigger: TCTCCCGTGTCTGTCTTCCCACAGTTTTCTCTTGAC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGGCAGAGATGTGCCTaGCATCACAGTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: PKAVVQHQQGRELGRARARQRCA*HHSLLF
Trigger: AAACAATAAACTGTGATGCCAGGCACATCTCTGCCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGT +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGCLYIS*HTGHSS
Trigger: ACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCA...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLLGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAAGGGGTGGAAGAGCTTaGAGCACTCATTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTRGGRA*STHCRR
Trigger: CCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCT...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCGGAGAGATGGTGTGTTaGTCCAGAGTGACAGATGGT +
Preference number: 4 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGGEMVC*SRVTDG
Trigger: ACCATCTGTCACTCTGGATCAACACACCATCTCTCC...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTGVGMS*SSGSPL
Trigger: AAGAGGTGACCCACTACTGCAAGACATGCCAACGCC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACATCGCCCAGGCTGCAGTaGAATGACACAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTSPRLQ*NDTILA
Trigger: AGCCAAGATTGTGTCATTGCACTGCAGCCTGGGCGA...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFTHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGGCAGAGATGTGCCTaGCATCACAGTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQRQRCA*HHSLLF
Trigger: AAACAATAAACTGTGATGCCAGGCACATCTCTGCCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGGCAGAGATGTGCCTaGCATCACAGTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVRQRCA*HHSLLF
Trigger: AAACAATAAACTGTGATGCCAGGCACATCTCTGCCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATGGGGTCACTCCATGTTaGTCAAGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHGVTPC*SSWSRT
Trigger: AGTTCGAGACCAGCTTGACCAACATGGAGTGACCCC...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACAGCAATGACACAATCTTaGCTCACCGCAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTAMTQS*LTATST
Trigger: GGTGGAGGTTGCGGTGAGCCAAGATTGTGTCATTGC...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTMEVKV*ISSPSA
Trigger: GGCAGAGGGTGAGGATATGCAGACCTTCACTTCCAT...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATACCCTAGCAAGTCTGTaGTCCACTTGCCACCCCTTC +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDTLASL*STCHPF
Trigger: GAAGGGGTGGCAAGTGGAGCACAGACTTGCTAGGGT...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGATCACCTTGGCAGGCTaGGCACGGGAACATGATCAC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLITLAG*AREHDH
Trigger: GTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTGTCACCTCTTCCTTGTaGTCTGGGCACATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFVTSSL*SGHIRP
Trigger: GGGCCTTATGTGCCCAGACCACAAGGAAGAGGTGAC...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTC +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHVCTVS*FPRMYV
Trigger: GACATACATCCTGGGAAACCAGGACACGGTACAGAC...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATTCCAGCTCACAGATCTaGGTCTGTACCGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDSSSQI*VCTVSW
Trigger: CCAGGACACGGTACAGACCCAGATCTGTGAGCTGGA...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAAGGCAGAGATGTGCCTaGCATCACAGTTTATTGTTT +
Preference number: 4 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKARQRCA*HHSLLF
Trigger: AAACAATAAACTGTGATGCCAGGCACATCTCTGCCT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGCATTCTTCAATGGCCTaGAGCAGTGATGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLHSSMA*SSDARF
Trigger: GAAGCGGGCATCACTGCTTCAGGCCATTGAAGAATG...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCCACACGACATGCTCTaGAAATCAGTCCTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHPHDML*KSVLKS
Trigger: GCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGAGCCCCCGCACCAGCTaGGACACCTCCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSPRTS*DTSSLA
Trigger: GGCCAAGGAGGAGGTGTCGCAGCTGGTGCGGGGGCT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQQAGHW*PSPPPA
Trigger: GGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTAACTTTCTTGAAGCTTaGTCTCCAGCCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFNFLEA*SPARRP
Trigger: TGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGTGGCAGGGGCACTGTaGAGCCGGCTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQVAGAL*SRLWGH
Trigger: ATGGCCCCACAGCCGGCTGCACAGTGCCCCTGCCAC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCCTGACCACACGACATaGTCTGAAAATCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHPDHTT*SENQSS
Trigger: TGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTG +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDTGQHQ*LLVHLL
Trigger: CAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGT...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGATCTTGTGCCCGCTGTaGGTGCGCCGCACCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQILCPL*VRRTRQ
Trigger: CTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGAT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGTGCCAAGAGGTTTaGGGGCCAGGGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGCQEV*GPGPRR
Trigger: CCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGAAGTGCAGGACAGGTaGCGGGGGCGTGTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQEVQDR*RGRVQV
Trigger: CACCTGCACACGCCCCCGGCACCTGTCCTGCACTTC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCATAGTCCAGGCAGATaGCCAGGCGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQHSPGR*PGGVAG
Trigger: CCCTGCCACCCCGCCTGGGCATCTGCCTGGACTATG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATCATCTCTTGACACACTaGGCACAGCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDHLLTH*AQQFLL
Trigger: GAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATG...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCCGGTCCAGGCGGTCTaGCTTGGGGAGAGTTCTGCG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQPVQAV*LGESSA
Trigger: CGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCA +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLCSRL*GHPSLS
Trigger: TGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACAATCCAGAGTGACAGATaGTTGGAAGGAAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTIQSDR*LEGSRD
Trigger: ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGAT...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR TCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTGCGCCACCCCCGATaGAGCAAAAGGCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLRHPR*SKRQGT
Trigger: TGTGCCCTGCCTTTTGCTTCATCGGGGGTGGCGCAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGTTTGAGAAGGAGTTTTaGTTTTGTCGCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLFEKEF*FCRPGC
Trigger: GCAGCCTGGGCGACAAAAGCAAAACTCCTTCTCAAA...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGTTGAGGTGTCACTaGGCATGCTCCCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGLRCH*ACSRDQ
Trigger: CTGGTCCCGGGAGCATGCGCAGTGACACCTCAACCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGGGCTTGCACAACTaGCACAGGATGGCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGGLHN*HRMAPP
Trigger: GGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSCWAF*VPQGWK
Trigger: CTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTATTTTAAGATACGGGTaGAGGAGGTCTTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLSLTTRHALKISPQKPFILRYG*RRSWRA
Trigger: TGCTCTCCAAGACCTCCTTCACCCGTATCTTAAAAT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTATCGAGGAAGAAGTaGAGGACAGGTGCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLSRKK*RTGAGG
Trigger: GCCCCCGGCACCTGTCCTGCACTTCTTCCTCGATAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLLELY*ATPDEA
Trigger: TGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQTLCSP*WPLVVG
Trigger: CCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGTGGGGGTGGGGGCCTaGCTAACAAGCAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQVGVGA*LTSNGE
Trigger: CTCTCCATTGCTTGTTAGCCAGGCCCCCACCCCCAC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLGTGT*SLGGAK
Trigger: CTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGACTCATTGCAGAAGGTaGCGCGGCACTCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQTHCRR*RGTLCS
Trigger: GCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGCACAGGACAGGGATaGAGAAGGGGCTCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGTGQG*RRGSLH
Trigger: ATGGAGAGAGCCCCTTCTCCATCCCTGTCCTGTGCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAAAGGTATGTTGGAAATaGAGTGTTAGGAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTKVCWK*SVRKKG
Trigger: TCCTTTCTTCCTAACACTCCATTTCCAACATACCTT...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGNMIT*GCKAPR
Trigger: GCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCTCTTCCTTGTGGTCTaGGCACATAAGGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLFLVV*AHKALG
Trigger: CCCAAGGGCCTTATGTGCCCAGACCACAAGGAAGAG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGTCACCTCTTCCTTGTaGTCTGGGCACATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQVTSSL*SGHIRP
Trigger: GGGCCTTATGTGCCCAGACCACAAGGAAGAGGTGAC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQMITWG*KAPRFL
Trigger: GAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCAT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQGVGMS*SSGSPL
Trigger: AAGAGGTGACCCACTACTGCAAGACATGCCAACGCC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQWNTPY*SLVLAD
Trigger: ATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGCAGAAGAGAGCCCCTaGGTCAAGAGAAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQAEESP*VKRKLW
Trigger: CCACAGTTTTCTCTTGACCCAGGGGCTCTCTTCTGC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR TCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGATAAATAAAGCAGGATaGCAGGGTCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQINKAG*QGPLPL
Trigger: GAGGGGAAGGGGACCCTGTCATCCTGCTTTATTTAT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR GCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQTDADQ*VHDGSE
Trigger: TTCACTTCCATCATGGACGCACTGGTCCGCATCAGT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
CDS-3UTR CCA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCATCTCTTGACACACTaGGCACAGCAGTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQHLLTH*AQQFLL
Trigger: GAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS GCA 90 bp TCCTCACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCCCCTGGGTaGCCGATCCCGGCTGCGGCTGCGAACCCCGGGCTTAATGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSPSAMALPCPPAPG*PIPAAAANPGLNAG
Trigger: TCCTGCATTAAGCCCGGGGTTCGCAGCCGCAGCCGGGATCGGGCACCCAGGGGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368385.8
ENST00000392451.6
ENST00000543729.5
ENST00000545012.5
CDS-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGGCCCTGCGTTTGAGCTaGCCCCCGACCCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWALRLS*PPTPAG
Trigger: TCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp GCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCCGCTGCCAGCGGGTGGGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: AHTQSPCRGSQAGHW*PSPPPAAASGWGLA
Trigger: AGCCAGGCCCCACCCGCTGGCAGCGGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp CCCTGGGTCACAGCCACGTCGCCCAGGACCACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGGTCAGCAGCCAGCAGCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PWVTATSPRTTSTLR*QPVSSRSAASSRGS
Trigger: GCTGCCCCTGCTGCTGGCTGCTGACCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGTGGTCCTGGGCGACGTGGCTGTGACCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHERVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp GAAGTGAAGGTCTGCATATCCTCACCCTCTGCCATGGCCCTACCGTaGCCGCCCGCCCCTGGGTGCCCGATCCCGGCTGCGGCTGCGAAC +
Preference number: 5 (lower is better)
Translates to: EVKVCISSPSAMALP*PPAPGCPIPAAAAN
Trigger: GTTCGCAGCCGCAGCCGGGATCGGGCACCCAGGGGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
CDS GCA 90 bp CCCGCCGCTGCCAGCGGGTGGGGCCTGGCTGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTATAGTGCCAGGCAGGTGGTGAATGGG +
Preference number: 5 (lower is better)
Translates to: PAAASGWGLAEQAHP*AGTQRYSARQVVNG
Trigger: CCCATTCACCACCTGCCTGGCACTATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp GCAGCCAGCAGCAGGGGCAGCCCTGGAACACTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGCCGCTCTCGGCTTGCGCCCCAGCGG +
Preference number: 5 (lower is better)
Translates to: AASSRGSPGTLRTAR*SLLIASRSRLAPQR
Trigger: CCGCTGGGGCGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTGCTGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CCAGGCGAGGTTGGCACTCCATCCTGCTCGCTCCATACGTCCTCCTaGCGCAGCTCCGGCCTGCGGCCACTCCAGCCTCCATTCCCCATC +
Preference number: 5 (lower is better)
Translates to: PGEVGTPSCSLHTSS*RSSGLRPLQPPFPI
Trigger: GATGGGGAATGGAGGCTGGAGTGGCCGCAGGCCGGAGCTGCGGCAGGAGGACGTATGGAGCGAGCAGGATGGAGTGCCAACCTCGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CCA 90 bp GCAGCCGGTCAGCAGCCGGTCAGCAGCCAGCAGCAGGGGCAGCCCTaGAACACTCCGTACTGCTCGCTGGTCCTTGCTGATAGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: AAGQQPVSSQQQGQP*NTPYCSLVLADSQP
Trigger: CGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTGCTGGCTGCTGACCGGCTGCTGACCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGAAGGCTCAGTCCAGCTaGGCGAAGCCCCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWKAQSS*AKPPMV
Trigger: CACCATTGGGGGCTTCGCCAAGCTGGACTGAGCCTT...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp AAGCTTGCTCTCCAGCCCGACGCCCACCTTGACCAAGTAGGAGGCTaGGTCTACGGCGCAGGCCCAGTAGCTGCGGCCCTGGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: KLALQPDAHLDQVGG*VYGAGPVAAALGHS
Trigger: GCTGTGACCCAGGGCCGCAGCTACTGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGCTGGAGAGCAAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEPHPAE*TYQALA
Trigger: TGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CCGTACTGCTCGCTGGTCCTTGCTGATAGCCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAGGAAGAAGTGCAGGACAGGTGCCGG +
Preference number: 5 (lower is better)
Translates to: PYCSLVLADSQPLSA*APAAIEEEVQDRCR
Trigger: CCGGCACCTGTCCTGCACTTCTTCCTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp CCCACCAGACCTGAGCCATCCAGCAGGCTCCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGCCGCTCCTGCTGGCATTCTTCAATG +
Preference number: 5 (lower is better)
Translates to: PTRPEPSSRLRCSWI*ALRRASRSCWHSSM
Trigger: CATTGAAGAATGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp CCATGCCAATGGTTAGGAAAGCGAAGGGTGGCGACGCCTCCACTGTaGCATCCTCGGCACCGCTGTCGTGCCCGCTGTCCGGGTCGTACC +
Preference number: 5 (lower is better)
Translates to: PCQWLGKRRVATPPL*HPRHRCRARCPGRT
Trigger: GGTACGACCCGGACAGCGGGCACGACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCTGTCAGCCCTGCGTTaGAGCTTGCCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLLSALR*SLPPTP
Trigger: TGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARARVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGGGAGACTTGGCACATaGGCATGGGTGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEGRLGT*AWVWDR
Trigger: CCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCGGGCACCAGAGGCCTaGCCTGGCCCAACCCAATGG +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTRAPEA*PGPTQW
Trigger: CCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS TCA 90 bp GACCTGAGCCATCCAGCAGGCTCCGGTGCTCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCTGCTGGCATTCTTCAATGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: DLSHPAGSGAPGSGR*DGPAAPAGILQWPE
Trigger: TTCAGGCCATTGAAGAATGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CGCGGCACTCTGTGCAGCCCTTGGTGGCCTCTAGTGGTGGGGGCTTaGACAACTGGCACAGGATGGCACCTCCCACACTCACACTCTGGC +
Preference number: 5 (lower is better)
Translates to: RGTLCSPWWPLVVGA*TTGTGWHLPHSHSG
Trigger: GCCAGAGTGTGAGTGTGGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTGCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp AGGCCCTTGGGTCGGAAGGAGAGGGTAGGCAGGGTGGGCTCATGCTaGGCCTTCTGGGTGCCCCAGGGGTGGAAGAGCTTGAAGCACTCA +
Preference number: 5 (lower is better)
Translates to: RPLGRKERVGRVGSC*AFWVPQGWKSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCTGCCTACCCTCTCCTTCCGACCCAAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTAGCAGAGCCCACTGCAGGGGGACGGCAGCGGGCACCAGAGGCCTTGCCTGGCTGCTTGTACATCTCTaGACACACTGGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: PSRAHCRGTAAGTRGLAWLLVHL*THWAQQ
Trigger: CTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAG...CCAGGCAAGGCCTCTGGTGCCCGCTGCCGTCCCCCTGCAGTGGGCTCTGCTAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHESLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLSTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GTGCCGGGGGCGTGTGCAGGTGCACATCTTCACTGTATTCGCCGTAGCCGGCCTGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: VPGACAGAHLHCIRRSRPARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...AGGCCGGCTACGGCGAATACAGTGAAGATGTGCACCTGCACACGCCCCCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGGACCCCAGCAGGATCTaGCCCATGCCAATGGTTAGG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEDPSRI*PMPMVR
Trigger: CCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTC...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGCCCTGCGTTTGAGCTaGCCCCCGACCCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARAALRLS*PPTPAG
Trigger: TCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCTGTCAGCCCTGCGTTaGAGCTTGCCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTLSALR*SLPPTP
Trigger: TGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp GCCCTGCGTTTGAGCTTGCCCCCGACCCCAGCAGGATCTTGCCCATaGCAATGGTTAGGAAAGCGAAGGGTGGCGACGCCTCCACTGTGG +
Preference number: 5 (lower is better)
Translates to: ALRLSLPPTPAGSCP*QWLGKRRVATPPLW
Trigger: CCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CGCAGACTGATGCGGACCAGTGCGTCCATGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RRLMRTSASMMEVKV*ISSPSAMALPCPPA
Trigger: GGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392451.6
CDS CCA 90 bp CCTTGGTGGCCTCTAGTGGTGGGGGCTTGCACAACTGGCACAGGATaGCACCTCCCACACTCACACTCTGGCGGTACCGCTCCACCACAC +
Preference number: 5 (lower is better)
Translates to: PWWPLVVGACTTGTG*HLPHSHSGGTAPPH
Trigger: GTGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp ACGTCCCACGTCGAGCTGGCAATGGCGGAAGGAGGAGCTGGCAGCTaGCCGGAATGTCTGGAGGGCTTCAGTGGCTCGGGCAATCCTGTT +
Preference number: 5 (lower is better)
Translates to: TSHVELAMAEGGAGS*PECLEGFSGSGNPV
Trigger: AACAGGATTGCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp TCATCTCACGTCCCACGTCGAGCTGGCAATGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCTGGAGGGCTTCAGTGGCTCGGGCAA +
Preference number: 5 (lower is better)
Translates to: SSHVPRRAGNGGRRS*QLAGMSGGLQWLGQ
Trigger: TTGCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACGTGAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp ACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TVFAVAGLVAAADTQHIHSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...GTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp ATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: IRRSRPCCSRGHAAHTQSHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...GCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGCCCCGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: AAHTQSPCRGSQAGHWCPGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...GGGGCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RTRSTYTEPVSGFSSRALPHPAE*TYQALA
Trigger: TGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGG...CAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGCCCTGCGTTTGAGCTaGCCCCCGACCCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQALRLS*PPTPAG
Trigger: TCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACTGTCAGCCCTGCGTTaGAGCTTGCCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARALSALR*SLPPTP
Trigger: TGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGAAGGCTCAGTCCAGCTaGGCGAAGCCCCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLKAQSS*AKPPMV
Trigger: CACCATTGGGGGCTTCGCCAAGCTGGACTGAGCCTT...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACGGGTGCCAAGAGGTTaGGGGGCCAGGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKRVPRG*GARAQE
Trigger: CTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCCG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CTGGTACTGATGCGGACCAGTGCGTCCATGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LVLMRTSASMMEVKV*ISSPSAMALPCPPA
Trigger: GGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368383.7
ENST00000368385.8
ENST00000474430.5
ENST00000543729.5
CDS GCA 90 bp CTGTCAGCCCTGCGTTTGAGCTTGCCCCCGACCCCAGCAGGATCTTaGCCATGCCAATGGTTAGGAAAGCGAAGGGTGGCGACGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSALRLSLPPTPAGS*PCQWLGKRRVATPP
Trigger: TGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp CTCACACTGATGCGGACCAGTGCGTCCATGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LTLMRTSASMMEVKV*ISSPSAMALPCPPA
Trigger: GGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368382.5
CDS CCA 90 bp GGCTTGCACAACTGGCACAGGATGGCACCTCCCACACTCACACTCTaGCGGTACCGCTCCACCACACGCTCCAGGGTCAGGTTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: GLHNWHRMAPPTLTL*RYRSTTRSRVRFRK
Trigger: TTTCCGGAACCTGACCCTGGAGCGTGTGGTGGAGCGGTACCGCCAGAGTGTGAGTGTGGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp AGCTGGCAATGGCGGAAGGAGGAGCTGGCAGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGGGCAATCCTGTTGTGCAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: SWQWRKEELAAGRNV*RASVARAILLCSCL
Trigger: CAAGCAGCTGCACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp AGCTCTGTCAGCAGCTTCATCTCACGTCCCACGTCGAGCTGGCAATaGCGGAAGGAGGAGCTGGCAGCTGGCCGGAATGTCTGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SSVSSFISRPTSSWQ*RKEELAAGRNVWRA
Trigger: AGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACGTGAGATGAAGCTGCTGACAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTGCAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: HAAHTQSPCRGSQAGHWCKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...GCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGCAGGGGTGGAAGAGCTaGAAGCACTCATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHEQGWKS*KHSLQK
Trigger: CTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTG...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARASTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTGCCAAGAGGTTTGGGGGCCAGGGCCCAGGAGGACCCCAGGTCTGCATGAGACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GCQEVWGPGPRRTPGLHETLETF*KLALQP
Trigger: GGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGT...CTCATGCAGACCTGGGGTCCTCCTGGGCCCTGGCCCCCAAACCTCTTGGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGCCCTGCGTTTGAGCTaGCCCCCGACCCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAALRLS*PPTPAG
Trigger: TCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCTGTCAGCCCTGCGTTaGAGCTTGCCCCCGACCCCA +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVLSALR*SLPPTP
Trigger: TGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACGGGCACCAGAGGCCTaGCCTGGCCCAACCCAATGG +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKRAPEA*PGPTQW
Trigger: CCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGAGGGCTGGGGGTaGAGGTGTCACTGCGCATGC +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQEEGWG*RCHCAC
Trigger: GCATGCGCAGTGACACCTCAACCCCCAGCCCTCCTC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS TCA 90 bp GCTCCCCAAGCTCCACATCACCTTGGCAGGCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAGCACCTCGCTTCCTCCCAGGGTATG +
Preference number: 5 (lower is better)
Translates to: APQAPHHLGRLGTGT*SLGGAKHLASSQGM
Trigger: CATACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTTGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS TCA 90 bp CCTGGAAACTTTCTTGAAGCTTGCTCTCCAGCCCGACGCCCACCTTaGCCAAGTAGGAGGCTGGGTCTACGGCGCAGGCCCAGTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PGNFLEACSPARRPP*PSRRLGLRRRPSSC
Trigger: GCAGCTACTGGGCCTGCGCCGTAGACCCAGCCTCCTACTTGGTCAAGGTGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp AAAGCACTGATGCGGACCAGTGCGTCCATGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: KALMRTSASMMEVKV*ISSPSAMALPCPPA
Trigger: GGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545012.5
CDS CCA 90 bp CGTTTGAGCTTGCCCCCGACCCCAGCAGGATCTTGCCCATGCCAATaGTTAGGAAAGCGAAGGGTGGCGACGCCTCCACTGTGGCATCCT +
Preference number: 5 (lower is better)
Translates to: RLSLPPTPAGSCPCQ*LGKRRVATPPLWHP
Trigger: AGGATGCCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAATCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: RTRSTYTEPVSGFSSRALSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...CAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp ATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: IRRSRPCCSRGHAAHTQSSLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...GCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVPHPAE*TYQALA
Trigger: TGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATAAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: FTVFAVAGLVAAADTQHISTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...TATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQSTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCACAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARAQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CACATCTTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: HIFTVFAVAGLVAAADTQQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...CTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAAGATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAGGAGGGCTGGGGGTaGAGGTGTCACTGCGCATGC +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKEEGWG*RCHCAC
Trigger: GCATGCGCAGTGACACCTCAACCCCCAGCCCTCCTC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000545012.5
CDS TCA 90 bp CTGGTCTGTTTCCTTAAGTACTTCCTGGGCATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCGGTGCTCCTGGATCTGGGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: LVCFLKYFLGIAHQT*AIQQAPVLLDLGAE
Trigger: CTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTATGCCCAGGAAGTACTTAAGGAAACAGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGCTGCTTGTACATCTCTaGACACACTGGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLLLVHL*THWAQQ
Trigger: CTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAG...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp TGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACACAGCGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: CIRRSRPCCSRGHAAHTQREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...CTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARASLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVTARWS*LIASRS
Trigger: AGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTARWS*LIASRS
Trigger: AGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGAAGGCTCAGTCCAGCTaGGCGAAGCCCCCAATGGTG +
Preference number: 5 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKKAQSS*AKPPMV
Trigger: CACCATTGGGGGCTTCGCCAAGCTGGACTGAGCCTT...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGGGAGACTTGGCACATaGGCATGGGTGTGGGACAGG +
Preference number: 5 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKGRLGT*AWVWDR
Trigger: CCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCC...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS GCA 90 bp ACATCACCTTGGCAGGCTGGGCACGGGAACATGATCACTTGGGGGTaGAAAGCACCTCGCTTCCTCCCAGGGTATGTCCCAAAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: TSPWQAGHGNMITWG*KAPRFLPGYVPKPD
Trigger: GTCAGGCTTTGGGACATACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CCA 90 bp TCGGGCACAGGCCTGGCACACGTTGTGGGTACAGGGCAGCACCAGTaGCTGCTTGTACATCTCTTGACACACTGGGCACAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: SGTGLAHVVGTGQHQ*LLVHLLTHWAQQFL
Trigger: AAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACCCACAACGTGTGCCAGGCCTGTGCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CCA 90 bp AGCTCCACATCACCTTGGCAGGCTGGGCACGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGCTTCCTCCCAGGGTATGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: SSTSPWQAGHGNMIT*GCKAPRFLPGYVPK
Trigger: CTTTGGGACATACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp AAGTTAAGCTCTGTCAGCAGCTTCATCTCACGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAGCTGGCAGCTGGCCGGAATGTCTGG +
Preference number: 5 (lower is better)
Translates to: KLSSVSSFISRPTSS*QWRKEELAAGRNVW
Trigger: CCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACGTGAGATGAAGCTGCTGACAGAGCTTAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCTGCTTGTACATCTCTaGACACACTGGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTLLVHL*THWAQQ
Trigger: CTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCTGCTTGTACATCTCTaGACACACTGGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: PCCSRGHAAHTQSPCRGSLLVHL*THWAQQ
Trigger: CTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAG...AGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp AAATCAGTCCTCAAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: KSVLKSPFAEPMRLLDTGSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...GCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTTGAGGACTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAATCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: AGSPRETWHIGMGVGQVKSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...CTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVSLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQSLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCTTGTTGCAGCCGCGGACACGCAGCACATACACAGAGCCCGTGTCGGGGTTCTCAGGGGTGGAAGAGCTaGAAGCACTCATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PCCSRGHAAHTQSPCRGSQGWKS*KHSLQK
Trigger: CTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTG...AGAACCCCGACACGGGCTCTGTGTATGTGCTGCGTGTCCGCGGCTGCAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp TGCAAGAGGGAGAAGAGGGACATAAGGGGCATGCGGCTGCGGGGTGTTGGGACCCAGGGGTGGAAGAGCTaGAAGCACTCATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CKREKRDIRGMRLRGVGTQGWKS*KHSLQK
Trigger: CTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTG...GGTCCCAACACCCCGCAGCCGCATGCCCCTTATGTCCCTCTTCTCCCTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGCACCAGAGGCCTTGCCTGGCCCAACCCAATGGGAACACCCAGACTCAGCTGTTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GHQRPCLAQPNGNTQTQLLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...CAGCTGAGTCTGGGTGTTCCCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKATARWS*LIASRS
Trigger: AGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGT...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKTARWS*LIASRS
Trigger: AGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGT...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTGACCCCAGCAGGATCTaGCCCATGCCAATGGTTAGG +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVDPSRI*PMPMVR
Trigger: CCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTC...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARAGSLHG*GNMPKA
Trigger: TGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCC...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKASSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHSLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTCTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVLLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATACTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: FTVFAVAGLVAAADTQHILLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...TATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp CCCAAGGCTGTAGTTCAGCATCAACAGGGCAGGGAGCTTGGCAGGGCAAGGGCAACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PKAVVQHQQGRELGRARATLETF*KLALQP
Trigger: GGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGT...TGCCCTTGCCCTGCCAAGCTCCCTGCCCTGTTGATGCTGAACTACAGCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGACCCCAGCAGGATCTaGCCCATGCCAATGGTTAGG +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKDPSRI*PMPMVR
Trigger: CCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATGACCCCAGCAGGATCTaGCCCATGCCAATGGTTAGG +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHDPSRI*PMPMVR
Trigger: CCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTC...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKALLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAACTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKLLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQTLETF*KLALQP
Trigger: GGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGT...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCAGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAGSLHG*GNMPKA
Trigger: TGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCC...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGGCTCTCTCCATGGCTaGGGTAACATGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKGSLHG*GNMPKA
Trigger: TGCCTTTGGCATGTTACCCAAGCCATGGAGAGAGCC...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AAAAGCCCTTTTGCTGAGCCCATGCGTCTCCTGGACACAGGCCTCCCAGCCTGGCGGGTGAAGGAGGTCTaGGAGAGCAAAGGTTTTATG +
Preference number: 5 (lower is better)
Translates to: KSPFAEPMRLLDTGLPAWRVKEV*ESKGFM
Trigger: CATAAAACCTTTGCTCTCCAAGACCTCCTTCACCCG...CCAGGCTGGGAGGCCTGTGTCCAGGAGACGCATGGGCTCAGCAAAAGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGCTGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAATTCTTCATGCTGGTCTaGGTCCCTCTCTTCGCAGCC +
Preference number: 5 (lower is better)
Translates to: SWVPKGDLAHWHGCGTGKFFMLV*VPLFAA
Trigger: GGCTGCGAAGAGAGGGACCAAGACCAGCATGAAGAA...TTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392451.6
CDS GCA 90 bp GCTTCAGTGGCTCGGGCAATCCTGTTGTGCAGCTGCTTGGCGGCTTaGACAAAGCAAGGCTGGTCTGTTTCCTTAAGTACTTCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ASVARAILLCSCLAA*TKQGWSVSLSTSWA
Trigger: TGCCCAGGAAGTACTTAAGGAAACAGACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGCCACTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp CTCACGGCCTCCTCCAGCTCACAGATCTGGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTCAGGCTCTTTGTCAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTASSSSQIWVCTVS*FPRMYVRLFVSLSL
Trigger: CAAGGACAAGCTGACAAAGAGCCTGACATACATCCTGGGAAACCAGGACACGGTACAGACCCAGATCTGTGAGCTGGAGGAGGCCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp GCCCGCTTCTCCTCCAGCTCACAGATCTGGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTCAGGCTCTTTGTCAGCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ARFSSSSQIWVCTVS*FPRMYVRLFVSLSL
Trigger: CAAGGACAAGCTGACAAAGAGCCTGACATACATCCTGGGAAACCAGGACACGGTACAGACCCAGATCTGTGAGCTGGAGGAGAAGCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392451.6
CDS CCA 90 bp CCATGTTCTTCATGCTGGTCTGCAGCTTTTCCAGAGCACCTGCCTTaGGCTGGTTCACAGACCTTCCCAGACCTCTGTCCCTTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PCSSCWSAAFPEHLP*AGSQTFPDLCPLLL
Trigger: GAGAAGCAAGGGACAGAGGTCTGGGAAGGTCTGTGAACCAGCCCAAGGCAGGTGCTCTGGAAAAGCTGCAGACCAGCATGAAGAACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS-3UTR CAA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TGGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCACAGGGGTGGAAGAGCTaGAAGCACTCATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: WVPKGDLAHWHGCGTGKAQGWKS*KHSLQK
Trigger: CTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTG...TGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACAGGGCACATAAGGCCCTaGGGTCGGAAGGAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: KEAEMAPSSIIPFPDHTTGHIRP*GRKERV
Trigger: TACCCTCTCCTTCCGACCCAAGGGCCTTATGTGCCC...TGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp CATGGTAGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAATTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: HGRRVWGRSCQGVTTGCQLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...TTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCTACCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AGGAGAGTTTGGGGGAGAAGCTGCCAGGGGGTAACAACCGGGTGCCAAGAGGTTTTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: RRVWGRSCQGVTTGCQEVLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...AACCTCTTGGCACCCGGTTGTTACCCCCTGGCAGCTTCTCCCCCAAACTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TTCACTGTATTCGCCGTAGCCGGCCTTGTTGCAGCCGCGGACACGCAGCACATATTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: FTVFAVAGLVAAADTQHILTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...TATGTGCTGCGTGTCCGCGGCTGCAACAAGGCCGGCTACGGCGAATACAGTGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543729.5
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHTLETF*KLALQP
Trigger: GGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGT...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS CCA 90 bp TTCTTCATGCTGGTCTGCAGCTTTTCCAGAGCACCTGCCTTGGGCTaGTTCACAGACCTTCCCAGACCTCTGTCCCTTGCTTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: FFMLVCSFSRAPALG*FTDLPRPLSLASLS
Trigger: GGAAAGAGAAGCAAGGGACAGAGGTCTGGGAAGGTCTGTGAACCAGCCCAAGGCAGGTGCTCTGGAAAAGCTGCAGACCAGCATGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CCA 90 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCTGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GTGQHQWLLVHLLTH*AQQFLLHVLHAGLQ
Trigger: CTGCAGACCAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CCA 90 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCTGGTCAACCC +
Preference number: 5 (lower is better)
Translates to: GTGQHQWLLVHLLTH*AQQFLLHVLHAGQP
Trigger: GGGTTGACCAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611379.1
CDS-3UTR CAA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHSLKHS*QKVARH
Trigger: GTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCT...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp GGGTCCCCAAGGGAGACTTGGCACATTGGCATGGGTGTGGGACAGGTAAAGCATTTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: GSPRETWHIGMGVGQVKHLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...ATGCTTTACCTGTCCCACACCCATGCCAATGTGCCAAGTCTCCCTTGGGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFPHPAE*TYQALA
Trigger: TGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFSTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTGCTCGGGCAATCCTGTaGTGCAGCTGCTTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFARAIL*CSCLAA
Trigger: AGCCGCCAAGCAGCTGCACAACAGGATTGCCCGAGC...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS CCA 90 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCTGGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: GTGQHQWLLVHLLTH*AQQFLLHVLHAGLG
Trigger: ACCAAGACCAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392451.6
ENST00000464760.5
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTCAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCTGTTGTGCAGCTGCTaGGCGGCTTGCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHLLCSC*AACTKQ
Trigger: TTGCTTTGTGCAAGCCGCCAAGCAGCTGCACAACAG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFTARWS*LIASRS
Trigger: AGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGT...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS CCA 90 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCTGGTACTGAT +
Preference number: 5 (lower is better)
Translates to: GTGQHQWLLVHLLTH*AQQFLLHVLHAGTD
Trigger: ATCAGTACCAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368383.7
ENST00000368385.8
ENST00000474430.5
ENST00000543729.5
CDS CCA 90 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCTGGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: GTGQHQWLLVHLLTH*AQQFLLHVLHAGLN
Trigger: GTTAAGACCAGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368382.5
CDS-3UTR CAA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATCTGCTTGTACATCTCTaGACACACTGGGCACAGCAG +
Preference number: 5 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHLLVHL*THWAQQ
Trigger: CTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAG...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACAGGGGTGGAAGAGCTaGAAGCACTCATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTQGWKS*KHSLQK
Trigger: CTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTG...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS GCA 90 bp TCCATGTTCTTCATGCTGGTCTTAACTCACACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAAGGTCTGCATATCCTCACCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SMFFMLVLTHTDADQ*VHDGSEGLHILTLC
Trigger: GCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTGTGAGTTAAGACCAGCATGAAGAACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368382.5
CDS-3UTR CAA 90 bp GTTGGAAGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACATTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: VGRKQRWLPLLSSLSLTTLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...TGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCTTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp AGGAAGCAGAGATGGCTCCCTCTTCTATCATCCCTTTCCCTGACCACACGACATTGGAGAGATGGTGTGTaGATCCAGAGTGACAGATGG +
Preference number: 5 (lower is better)
Translates to: RKQRWLPLLSSLSLTTRHWRDGV*IQSDRW
Trigger: CCATCTGTCACTCTGGATCAACACACCATCTCTCCA...ATGTCGTGTGGTCAGGGAAAGGGATGATAGAAGAGGGAGCCATCTCTGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TCCCTTTCCCTGACCACACGACATGCTCTGAAAATCAGTCCTCAAAAGCCCTTTTGGGGTCACTCCATGTaGGTCAAGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SLSLTTRHALKISPQKPFWGHSM*VKLVSN
Trigger: GTTCGAGACCAGCTTGACCAACATGGAGTGACCCCA...AAAGGGCTTTTGAGGACTGATTTTCAGAGCATGTCGTGTGGTCAGGGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp TGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGGAAGGAAGCAGAGATACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WRDGVLIQSDRWLEGSRDTLETF*KLALQP
Trigger: GGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGT...ATCTCTGCTTCCTTCCAACCATCTGTCACTCTGGATCAACACACCATCTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGGCCCTGCGTTTGAGCTaGCCCCCGACCCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQALRLS*PPTPAG
Trigger: TCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGC...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCGGGCACCAGAGGCCTaGCCTGGCCCAACCCAATGG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQRAPEA*PGPTQW
Trigger: CCATTGGGTTGGGCCAGGCAAGGCCTCTGGTGCCCG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSRRSG*GRVLRE
Trigger: CTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQHSVQP*VASSGG
Trigger: CCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQPHPAE*TYQALA
Trigger: TGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGAGCACTGGTGTGATCTaGTGCCCGCTGTGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSTGVI*CPLWVR
Trigger: GCGCACCCACAGCGGGCACAAGATCACACCAGTGCT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGAAGCTCCACATCACCTaGGCAGGCTGGGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQKLHIT*AGWARE
Trigger: TTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCAGCTGCTTGGCGGCTaGCACAAAGCAAGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQQLLGG*HKARLV
Trigger: GACCAGCCTTGCTTTGTGCAAGCCGCCAAGCAGCTG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp AAGGACACAGATGCTTGGAGAGATGGTGTGTTGATCCAGAGTGACAGATGGTTGAAAGGACACAGATGCTaGGAGAGATGGTGTGTTGAT +
Preference number: 5 (lower is better)
Translates to: KDTDAWRDGVLIQSDRWLKGHRC*ERWCVD
Trigger: ATCAACACACCATCTCTCCAAGCATCTGTGTCCTTT...CAACCATCTGTCACTCTGGATCAACACACCATCTCTCCAAGCATCTGTGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368383.7
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGCGGGAACATGATCACTaGGGGGTGCAAAGCACCTCG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQREHDH*GVQSTS
Trigger: CGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCG...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQSSGGG*HNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS-3UTR CAA 90 bp CATCACAGTTTATTGTTTATAAACCATGACAATAACAGCTGTTGCTCAGCACAGTTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: HHSLLFINHDNNSCCSAQLTYQA*ACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAA...CTGTGCTGAGCAACAGCTGTTATTGTCATGGTTTATAAACAATAAACTGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp ACCCTCTGCCATGGCCCTACCGTGCCCGCCCGCCCCTaGGTGCCCGATCCCGGCTGCGGCTGCGAACCCCGG +
Preference number: 6 (lower is better)
Translates to: TLCHGPTVPARP*VPDPGCGCEPR
Trigger: CCGGGGTTCGCAGCCGCAGCCGGGATCGGGCACCCAGGGGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334634.9
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
CDS GCA 72 bp CAGAGCCCGTGTCGGGGTTCTCAAGCAGGGCACTGGTaGCCCTCACCTCCTCCCGCCGCTGCCAGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: QSPCRGSQAGHW*PSPPPAAASGW
Trigger: CCACCCGCTGGCAGCGGCGGGAGGAGGTGAGGGGCACCAGTGCCCTGCTTGAGAACCCCGACACGGGCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CCTCACCTCCTCCCGCCGCTGCCAGCGGGTGGGGCCTaGCTGAGCAGGCACATCCGTGCGCCGGAACTCAAC +
Preference number: 6 (lower is better)
Translates to: PHLLPPLPAGGA*LSRHIRAPELN
Trigger: GTTGAGTTCCGGCGCACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGGCAGCGGCGGGAGGAGGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CCAGGCGGGGTGGCAGGGGCACTGTGCAGCCGGCTGTaGGGCCATCCCTCCCTGTCAGCCCTGCGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: PGGVAGALCSRL*GHPSLSALRLS
Trigger: GCTCAAACGCAGGGCTGACAGGGAGGGATGGCCCCACAGCCGGCTGCACAGTGCCCCTGCCACCCCGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CCTGAGCCATCCAGCAGGCTCCGGTGCTCCTGGATCTaGGCGCTGAGACGGGCCAGCCGCTCCTGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: PEPSSRLRCSWI*ALRRASRSCWH
Trigger: ATGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp ACCAGACCTGAGCCATCCAGCAGGCTCCGGTGCTCCTaGATCTGGGCGCTGAGACGGGCCAGCCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: TRPEPSSRLRCS*IWALRRASRSC
Trigger: GCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp GCCAGCGGGTGGGGCCTGGCTGAGCAGGCACATCCGTaGGCCGGAACTCAACGGTATAGTGCCAGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: ASGWGLAEQAHP*AGTQRYSARQV
Trigger: CACCTGCCTGGCACTATACCGTTGAGTTCCGGCGCACGGATGTGCCTGCTCAGCCAGGCCCCACCCGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp GACGCCTCCACTGTGGCATCCTCGGCACCGCTGTCGTaGCCGCTGTCCGGGTCGTACCTGGGGCTGATCACA +
Preference number: 6 (lower is better)
Translates to: DASTVASSAPLS*PLSGSYLGLIT
Trigger: TGTGATCAGCCCCAGGTACGACCCGGACAGCGGGCACGACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp GTTGGCACTCCATCCTGCTCGCTCCATACGTCCTCCTaGCGCAGCTCCGGCCTGCGGCCACTCCAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: VGTPSCSLHTSS*RSSGLRPLQPP
Trigger: TGGAGGCTGGAGTGGCCGCAGGCCGGAGCTGCGGCAGGAGGACGTATGGAGCGAGCAGGATGGAGTGCCAAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CCA 72 bp ACAGCCACGTCGCCCAGGACCACATCCACACTCAGGTaGCAGCCGGTCAGCAGCCGGTCAGCAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TATSPRTTSTLR*QPVSSRSAASS
Trigger: GCTGCTGGCTGCTGACCGGCTGCTGACCGGCTGCCACCTGAGTGTGGATGTGGTCCTGGGCGACGTGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp AAGCCTGACTTAAGCAGCCGGTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAGAGGCGGGGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: KPDLSSRSRRSG*GRVLRERRGLR
Trigger: CCGCAGCCCCCGCCTCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGGCTGCTTAAGTCAGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CAA 90 bp AGCAGCAGGGGCAGCCCTGGAACACTCCGTACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCTCGGCTTGCGCCCCAGCGGCTATCG +
Preference number: 6 (lower is better)
Translates to: SSRGSPGTLRTARWS*LIASRSRLAPQRLS
Trigger: CGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp GTCGAGCTGGCAATGGCGGAAGGAGGAGCTGGCAGCTaGCCGGAATGTCTGGAGGGCTTCAGTGGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: VELAMAEGGAGS*PECLEGFSGSG
Trigger: GCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp TGGTTAGGAAAGCGAAGGGTGGCGACGCCTCCACTGTaGCATCCTCGGCACCGCTGTCGTGCCCGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: WLGKRRVATPPL*HPRHRCRARCP
Trigger: CGGACAGCGGGCACGACAGCGGTGCCGAGGATGCCACAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp GGCAGCCCTGGAACACTCCGTACTGCTCGCTGGTCCTaGCTGATAGCCAGCCGCTCTCGGCTTGCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GSPGTLRTARWS*LIASRSRLAPQ
Trigger: CTGGGGCGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp TATGTCCCAAAGCCTGACTTAAGCAGCCGGTCCAGGCGGTCTGGCTaGGGGAGAGTTCTGCGGGAGAGGCGGGGGCTGCGGGTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: YVPKPDLSSRSRRSG*GRVLRERRGLRVEG
Trigger: CCCTTCCACCCGCAGCCCCCGCCTCTCCCGCAGAACTCTCCCCAAGCCAGACCGCCTGGACCGGCTGCTTAAGTCAGGCTTTGGGACATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS TCA 72 bp CATCCAGCAGGCTCCGGTGCTCCTGGATCTGGGCGCTaGGACGGGCCAGCCGCTCCTGCTGGCATTCTTCAA +
Preference number: 6 (lower is better)
Translates to: HPAGSGAPGSGR*DGPAAPAGILQ
Trigger: TTGAAGAATGCCAGCAGGAGCGGCTGGCCCGTCTCAGCGCCCAGATCCAGGAGCACCGGAGCCTGCTGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp AGCCAGCAGCAGGGGCAGCCCTGGAACACTCCGTACTaGTCGCTGGTCCTTGCTGATAGCCAGCCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SQQQGQPWNTPY*SLVLADSQPLS
Trigger: CGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCTGCTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp GTCCCACGTCGAGCTGGCAATGGCGGAAGGAGGAGCTaGCAGCTGGCCGGAATGTCTGGAGGGCTTCAGTGG +
Preference number: 6 (lower is better)
Translates to: VPRRAGNGGRRS*QLAGMSGGLQW
Trigger: CCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp AGCAGGGGCAGCCCTGGAACACTCCGTACTGCTCGCTaGTCCTTGCTGATAGCCAGCCGCTCTCGGCTTGCG +
Preference number: 6 (lower is better)
Translates to: SRGSPGTLRTAR*SLLIASRSRLA
Trigger: CGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGAGCAGTACGGAGTGTTCCAGGGCTGCCCCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp GCGCGGCACTCTGTGCAGCCCTTGGTGGCCTCTAGTGGTGGGGGCTaGCACAACTGGCACAGGATGGCACCTCCCACACTCACACTCTGG +
Preference number: 6 (lower is better)
Translates to: ARHSVQPLVASSGGG*HNWHRMAPPTLTLW
Trigger: CCAGAGTGTGAGTGTGGGAGGTGCCATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS TCA 72 bp CCACTGGCTCCTGGAGCTGTACTGCGCCACCCCCGATaGAGCAAAAGGCAGGGCACACAGGCCCTGAGCAGT +
Preference number: 6 (lower is better)
Translates to: PLAPGAVLRHPR*SKRQGTQALSS
Trigger: ACTGCTCAGGGCCTGTGTGCCCTGCCTTTTGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAGCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp CATGATGGAAGTGAAGGTCTGCATATCCTCACCCTCTaGCATGGCCCTACCGTGCCCGCCCGCCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: HDGSEGLHILTL*HGPTVPARPWV
Trigger: CACCCAGGGGCGGGCGGGCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
CDS GCA 72 bp TCGCTGGTCCTTGCTGATAGCCAGCCGCTCTCGGCTTaGGCCCCAGCGGCTATCGAGGAAGAAGTGCAGGAC +
Preference number: 6 (lower is better)
Translates to: SLVLADSQPLSA*APAAIEEEVQD
Trigger: GTCCTGCACTTCTTCCTCGATAGCCGCTGGGGCGCAAGCCGAGAGCGGCTGGCTATCAGCAAGGACCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CATTGCAGAAGGTGGCGCGGCACTCTGTGCAGCCCTTaGTGGCCTCTAGTGGTGGGGGCTTGCACAACTGGC +
Preference number: 6 (lower is better)
Translates to: HCRRWRGTLCSP*WPLVVGACTTG
Trigger: GCCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCACCTTCTGCAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp GAGAGGGTAGGCAGGGTGGGCTCATGCTGGGCCTTCTaGGTGCCCCAGGGGTGGAAGAGCTTGAAGCACTCA +
Preference number: 6 (lower is better)
Translates to: ERVGRVGSCWAF*VPQGWKSLKHS
Trigger: TGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCAGCATGAGCCCACCCTGCCTACCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp AGCTGGCAGCTGGCCGGAATGTCTGGAGGGCTTCAGTaGCTCGGGCAATCCTGTTGTGCAGCTGCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: SWQLAGMSGGLQ*LGQSCCAAAWR
Trigger: CCGCCAAGCAGCTGCACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp TGGCGGAAGGAGGAGCTGGCAGCTGGCCGGAATGTCTaGAGGGCTTCAGTGGCTCGGGCAATCCTGTTGTGC +
Preference number: 6 (lower is better)
Translates to: WRKEELAAGRNV*RASVARAILLC
Trigger: GCACAACAGGATTGCCCGAGCCACTGAAGCCCTCCAGACATTCCGGCCAGCTGCCAGCTCCTCCTTCCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp TCTGTCAGCAGCTTCATCTCACGTCCCACGTCGAGCTaGCAATGGCGGAAGGAGGAGCTGGCAGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SVSSFISRPTSS*QWRKEELAAGR
Trigger: CCGGCCAGCTGCCAGCTCCTCCTTCCGCCATTGCCAGCTCGACGTGGGACGTGAGATGAAGCTGCTGACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp TGGGCCTTCTGGGTGCCCCAGGGGTGGAAGAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCACTCTGTGCAGCCCTTGGTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: WAFWVPQGWKSLKHS*QKVARHSVQPLVAS
Trigger: AGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCAGAAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp CCTGTCAGCCCTGCGTTTGAGCTTGCCCCCGACCCCAGCAGGATCTaGCCCATGCCAATGGTTAGGAAAGCGAAGGGTGGCGACGCCTCC +
Preference number: 6 (lower is better)
Translates to: PVSPAFELAPDPSRI*PMPMVRKAKGGDAS
Trigger: GGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAGGGCTGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp CTTTCCCCGCTGCAGAGCGTGATTCCTCCCGATAGCCAGGCGAGGTaGGCACTCCATCCTGCTCGCTCCATACGTCCTCCTGCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: LSPLQSVIPPDSQAR*ALHPARSIRPPAAA
Trigger: AGCTGCGGCAGGAGGACGTATGGAGCGAGCAGGATGGAGTGCCAACCTCGCCTGGCTATCGGGAGGAATCACGCTCTGCAGCGGGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS GCA 72 bp CTCAGGCTTAGTGCCCACTGGCTCCTGGAGCTGTACTaGGCCACCCCCGATGAAGCAAAAGGCAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: LRLSAHWLLELY*ATPDEAKGRAH
Trigger: GTGTGCCCTGCCTTTTGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp TTGCCCCCGACCCCAGCAGGATCTTGCCCATGCCAATaGTTAGGAAAGCGAAGGGTGGCGACGCCTCCACTG +
Preference number: 6 (lower is better)
Translates to: LPPTPAGSCPCQ*LGKRRVATPPL
Trigger: CAGTGGAGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp TCATTGCAGAAGGTGGCGCGGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGGGGCTTGCACAACTGG +
Preference number: 6 (lower is better)
Translates to: SLQKVARHSVQP*VASSGGGLHNW
Trigger: CCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCACCTTCTGCAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp TGGGTGCCCCAGGGGTGGAAGAGCTTGAAGCACTCATaGCAGAAGGTGGCGCGGCACTCTGTGCAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: WVPQGWKSLKHS*QKVARHSVQPL
Trigger: CAAGGGCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGTGCTTCAAGCTCTTCCACCCCTGGGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp CTTGTGCCCGCTGTGGGTGCGCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCATGTCTTGCAGTAGTG +
Preference number: 6 (lower is better)
Translates to: LVPAVGAPHPAE*TYQALACLAVV
Trigger: CACTACTGCAAGACATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp TGGTGTGATCTTGTGCCCGCTGTGGGTGCGCCGCACCCGGCAGAGTaGACATACCAGGCGTTGGCATGTCTTGCAGTAGTGGGTCACCTC +
Preference number: 6 (lower is better)
Translates to: WCDLVPAVGAPHPAE*TYQALACLAVVGHL
Trigger: GAGGTGACCCACTACTGCAAGACATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGGCGCACCCACAGCGGGCACAAGATCACACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS TCA 72 bp GCTCCACATCACCTTGGCAGGCTGGGCACGGGAACATaGTCACTTGGGGGTGCAAAGCACCTCGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: APHHLGRLGTGT*SLGGAKHLASS
Trigger: GGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp TTGAGCTTGCCCCCGACCCCAGCAGGATCTTGCCCATaGCAATGGTTAGGAAAGCGAAGGGTGGCGACGCCT +
Preference number: 6 (lower is better)
Translates to: LSLPPTPAGSCP*QWLGKRRVATP
Trigger: AGGCGTCGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp CTGCGTTTGAGCTTGCCCCCGACCCCAGCAGGATCTTaGCCATGCCAATGGTTAGGAAAGCGAAGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: LRLSLPPTPAGS*PCQWLGKRRVA
Trigger: CGCCACCCTTCGCTTTCCTAACCATTGGCATGGGCAAGATCCTGCTGGGGTCGGGGGCAAGCTCAAACGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp CTGCAGAGCGTGATTCCTCCCGATAGCCAGGCGAGGTaGGCACTCCATCCTGCTCGCTCCATACGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LQSVIPPDSQAR*ALHPARSIRPP
Trigger: AGGAGGACGTATGGAGCGAGCAGGATGGAGTGCCAACCTCGCCTGGCTATCGGGAGGAATCACGCTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CAA 90 bp TTGAAGCACTCATTGCAGAAGGTGGCGCGGCACTCTGTGCAGCCCTaGGTGGCCTCTAGTGGTGGGGGCTTGCACAACTGGCACAGGATG +
Preference number: 6 (lower is better)
Translates to: LKHSLQKVARHSVQP*VASSGGGLHNWHRM
Trigger: CATCCTGTGCCAGTTGTGCAAGCCCCCACCACTAGAGGCCACCAAGGGCTGCACAGAGTGCCGCGCCACCTTCTGCAATGAGTGCTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp TCACCTTGGCAGGCTGGGCACGGGAACATGATCACTTaGGGGTGCAAAGCACCTCGCTTCCTCCCAGGGTAT +
Preference number: 6 (lower is better)
Translates to: SPWQAGHGNMIT*GCKAPRFLPGY
Trigger: ATACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CCCAATGGTGACTTTCCTCTCAGGCTTAGTGCCCACTaGCTCCTGGAGCTGTACTGCGCCACCCCCGATGAA +
Preference number: 6 (lower is better)
Translates to: PNGDFPLRLSAH*LLELYCATPDE
Trigger: TTCATCGGGGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCTGAGAGGAAAGTCACCATTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp ATCACCTTGGCAGGCTGGGCACGGGAACATGATCACTaGGGGGTGCAAAGCACCTCGCTTCCTCCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: ITLAGWAREHDH*GVQSTSLPPRV
Trigger: TACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp GGTGCGCCGCACCCGGCAGAGTTGACATACCAGGCGTaGGCATGTCTTGCAGTAGTGGGTCACCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: GAPHPAELTYQA*ACLAVVGHLFL
Trigger: AAGGAAGAGGTGACCCACTACTGCAAGACATGCCAACGCCTGGTATGTCAACTCTGCCGGGTGCGGCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp GTCGTACCTGGGGCTGATCACATCGGGGGCACCCTGGAAACTTTCTaGAAGCTTGCTCTCCAGCCCGACGCCCACCTTGACCAAGTAGGA +
Preference number: 6 (lower is better)
Translates to: VVPGADHIGGTLETF*KLALQPDAHLDQVG
Trigger: TCCTACTTGGTCAAGGTGGGCGTCGGGCTGGAGAGCAAGCTTCAAGAAAGTTTCCAGGGTGCCCCCGATGTGATCAGCCCCAGGTACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CAA 90 bp AAGCTCCACATCACCTTGGCAGGCTGGGCACGGGAACATGATCACTaGGGGGTGCAAAGCACCTCGCTTCCTCCCAGGGTATGTCCCAAA +
Preference number: 6 (lower is better)
Translates to: KLHITLAGWAREHDH*GVQSTSLPPRVCPK
Trigger: TTTGGGACATACCCTGGGAGGAAGCGAGGTGCTTTGCACCCCCAAGTGATCATGTTCCCGTGCCCAGCCTGCCAAGGTGATGTGGAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS TCA 72 bp TTCCTTAAGTACTTCCTGGGCATAGCCCACCAGACCTaGGCCATCCAGCAGGCTCCGGTGCTCCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: FLKYFLGIAHQT*AIQQAPVLLDL
Trigger: CAGATCCAGGAGCACCGGAGCCTGCTGGATGGCTCAGGTCTGGTGGGCTATGCCCAGGAAGTACTTAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS GCA 72 bp ATGCGGACCAGTGCGTCCATGATGGAAGTGAAGGTCTaGATATCCTCACCCTCTGCCATGGCCCTACCGTGC +
Preference number: 6 (lower is better)
Translates to: MRTSASMMEVKV*ISSPSAMALPC
Trigger: GCACGGTAGGGCCATGGCAGAGGGTGAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
CDS GCA 72 bp CCCGGCAGAGTTGACATACCAGGCGTTGGCATGTCTTaGAGTAGTGGGTCACCTCTTCCTTGTGGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: PGRVDIPGVGMS*SSGSPLPCGLG
Trigger: GCCCAGACCACAAGGAAGAGGTGACCCACTACTGCAAGACATGCCAACGCCTGGTATGTCAACTCTGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp GTGACTTTCCTCTCAGGCTTAGTGCCCACTGGCTCCTaGAGCTGTACTGCGCCACCCCCGATGAAGCAAAAG +
Preference number: 6 (lower is better)
Translates to: VTFLSGLVPTGS*SCTAPPPMKQK
Trigger: CTTTTGCTTCATCGGGGGTGGCGCAGTACAGCTCCAGGAGCCAGTGGGCACTAAGCCTGAGAGGAAAGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000392451.6
ENST00000468878.1
ENST00000545012.5
ENST00000611379.1
CDS CCA 72 bp CTGGTCTGCAGCTTTTCCAGAGCACCTGCCTTGGGCTaGTTCACAGACCTTCCCAGACCTCTGTCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LVCSFSRAPALG*FTDLPRPLSLA
Trigger: AGCAAGGGACAGAGGTCTGGGAAGGTCTGTGAACCAGCCCAAGGCAGGTGCTCTGGAAAAGCTGCAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CAA 72 bp TTCATGCTGGTCTGCAGCTTTTCCAGAGCACCTGCCTaGGGCTGGTTCACAGACCTTCCCAGACCTCTGTCC +
Preference number: 6 (lower is better)
Translates to: FMLVCSFSRAPA*GWFTDLPRPLS
Trigger: GGACAGAGGTCTGGGAAGGTCTGTGAACCAGCCCAAGGCAGGTGCTCTGGAAAAGCTGCAGACCAGCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS CAA 90 bp TCCATGTTCTTCATGCTGGTCTGCAGCTTTTCCAGAGCACCTGCCTaGGGCTGGTTCACAGACCTTCCCAGACCTCTGTCCCTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: SMFFMLVCSFSRAPA*GWFTDLPRPLSLAS
Trigger: AGAAGCAAGGGACAGAGGTCTGGGAAGGTCTGTGAACCAGCCCAAGGCAGGTGCTCTGGAAAAGCTGCAGACCAGCATGAAGAACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468878.1
CDS TCA 72 bp GTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTTaGCACACTGGGCACAGCAGTTCCTTCTCCATGTTC +
Preference number: 6 (lower is better)
Translates to: VQGSTSGCLYIS*HTGHSSSFSMF
Trigger: GAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CCA 72 bp TCCTCCAGCTCACAGATCTGGGTCTGTACCGTGTCCTaGTTTCCCAGGATGTATGTCAGGCTCTTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: SSSSQIWVCTVS*FPRMYVRLFVS
Trigger: GCTGACAAAGAGCCTGACATACATCCTGGGAAACCAGGACACGGTACAGACCCAGATCTGTGAGCTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000545012.5
ENST00000611379.1
CDS CAA 72 bp GGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTaGACACACTGGGCACAGCAGTTCCTTCTCCATGTT +
Preference number: 6 (lower is better)
Translates to: GTGQHQWLLVHL*THWAQQFLLHV
Trigger: AACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CAA 90 bp CACGTTGTGGGTACAGGGCAGCACCAGTGGCTGCTTGTACATCTCTaGACACACTGGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: HVVGTGQHQWLLVHL*THWAQQFLLHVLHA
Trigger: AGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTGCCCTGTACCCACAACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS CCA 72 bp CAGCACCAGTGGCTGCTTGTACATCTCTTGACACACTaGGCACAGCAGTTCCTTCTCCATGTTCTTCATGCT +
Preference number: 6 (lower is better)
Translates to: QHQWLLVHLLTH*AQQFLLHVLHA
Trigger: AGCATGAAGAACATGGAGAAGGAACTGCTGTGCCCAGTGTGTCAAGAGATGTACAAGCAGCCACTGGTGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334634.9
ENST00000368382.5
ENST00000368383.7
ENST00000368385.8
ENST00000392451.6
ENST00000464760.5
ENST00000468878.1
ENST00000474430.5
ENST00000543729.5
ENST00000611379.1
CDS GCA 72 bp TTCATGCTGGTCTTAACTCACACTGATGCGGACCAGTaGGTCCATGATGGAAGTGAAGGTCTGCATATCCTC +
Preference number: 6 (lower is better)
Translates to: FMLVLTHTDADQ*VHDGSEGLHIL
Trigger: GAGGATATGCAGACCTTCACTTCCATCATGGACGCACTGGTCCGCATCAGTGTGAGTTAAGACCAGCATGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368382.5