RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000146833

Ensembl transcript IDs: ENST00000349062.7, ENST00000354241.5, ENST00000355947.6, ENST00000447480.5, ENST00000496896.1

Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGTGCCCGTGAACTACGAGTTTTCTGGTGTGGCTGATAGGAACTaGCACTGTTCCTGGCCCTGTGTGAGCACCAGGAACCGTTCCCTC +
Preference number: 1 (lower is better)
Translates to: SVPVNYEFSGVADRN*HCSWPCVSTRNRSL
Trigger: GAGGGAACGGTTCCTGGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATCAGCCACACCAGAAAACTCGTAGTTCACGGGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CCA 90 bp ACAAAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATaGACCATCCAGGATAGAGACATGAAGGGCAGAAGAGGGCCCAGG +
Preference number: 1 (lower is better)
Translates to: TKGRYQTVPLGRPRR*TIQDRDMKGRRGPR
Trigger: CCTGGGCCCTCTTCTGCCCTTCATGTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR GCA 90 bp TTCTATGCCTTTGTCAAATTTCACAAAAGTGACTTAAGCCTATACTaGGGGATGTTCACACTACGTCCCTTTAGTGCAGTTACGGTACTT +
Preference number: 1 (lower is better)
Translates to: FYAFVKFHKSDLSLY*GMFTLRPFSAVTVL
Trigger: AAGTACCGTAACTGCACTAAAGGGACGTAGTGTGAACATCCCGCAGTATAGGCTTAAGTCACTTTTGTGAAATTTGACAAAGGCATAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR CCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCGGGAGACCCAGAAGATaGACCATCCAGGATAGAGAC +
Preference number: 2 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAGRPRR*TIQDRD
Trigger: GTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCCC...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR TCA 90 bp TTTTCTGGTGTGGCTGATAGGAACTGGCACTGTTCCTGGCCCTGTGTGAGCACCTTCACAGGCATGTGCTaGTCAGAACTCTGCCAAACA +
Preference number: 2 (lower is better)
Translates to: FSGVADRNWHCSWPCVSTFTGMC*SELCQT
Trigger: TGTTTGGCAGAGTTCTGATCAGCACATGCCTGTGAA...GGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATCAGCCACACCAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR-3UTR TCA 90 bp TCTAGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTGTTCCTGGCCCTGTGTaGGCACCAGGAACCGTTCCC +
Preference number: 2 (lower is better)
Translates to: SRALSWDAVKLVGKSLTPVPGPV*APGTVP
Trigger: GGGAACGGTTCCTGGTGCTCACACAGGGCCAGGAAC...AGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CAA 90 bp AAGATTTCCCAAAAGCGTCTTGGAAAATTTCCTGTCCCATCTCCATaGGCCAGACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACAC +
Preference number: 2 (lower is better)
Translates to: KISQKRLGKFPVPSP*ARPTSHGTASCEAH
Trigger: GTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGACGCTTTTGGGAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CAA 90 bp CTCCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTaGTTCTCCGTGAACTCCCAGGTCTATTCCTCAACTCAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: LRSRILPSTLRTLTT*FSVNSQVYSSTQQV
Trigger: GACTTGCTGAGTTGAGGAATAGACCTGGGAGTTCACGGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGCTGTCCCATCTCCATTaGCCAGACCCACCTCCCATG +
Preference number: 2 (lower is better)
Translates to: DKNWILIPTLPFTSWPILLSHLH*PDPPPM
Trigger: CATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAG...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR TCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTGGGACTGCCTCTTGTaGAGCACACAAAGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: DKNWILIPTLPFTSWPILWDCLL*STQRAD
Trigger: ATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CAA 90 bp TTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTaGGGTCTTGCTTTCATGATTTGTAAGGTGGGTGTGGAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSWDAVKLVGKSLTP*GLAFMICKVGVEQH
Trigger: GTGCTGCTCCACACCCACCTTACAAATCATGAAAGCAAGACCCAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATAGCACAGTTAATAGCTaGGGGCAGAGTTATGGTTGG +
Preference number: 2 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHSTVNS*GQSYGW
Trigger: CCAACCATAACTCTGCCCTCAGCTATTAACTGTGCT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR GCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGGACTTAAGCCTATACTaGGGGATGTTCACACTACGT +
Preference number: 2 (lower is better)
Translates to: DKNWILIPTLPFTSWPILDLSLY*GMFTLR
Trigger: ACGTAGTGTGAACATCCCGCAGTATAGGCTTAAGTC...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR CCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAAGGGAGACCCAGAAGATaGACCATCCAGGATAGAGAC +
Preference number: 2 (lower is better)
Translates to: LANTELVTLKSSVFSFVQGRPRR*TIQDRD
Trigger: GTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCCC...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATAGCAGAAGGGTAGACTaGGGAAAATATACACAGTAT +
Preference number: 2 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHSRRVD*GKYTQY
Trigger: ATACTGTGTATATTTTCCTCAGTCTACCCTTCTGCT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTTCCCAAAAGCGTCTTaGAAAATTTCCTGTCCCATC +
Preference number: 2 (lower is better)
Translates to: DKNWILIPTLPFTSWPILFPKAS*KISCPI
Trigger: GATGGGACAGGAAATTTTCCAAGACGCTTTTGGGAA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR CCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCAGTTCCAATATaGCTGCTAACATCCATATGT +
Preference number: 2 (lower is better)
Translates to: TAIYQLANTELVTLKSSVFSVPI*LLTSIC
Trigger: ACATATGGATGTTAGCAGCCATATTGGAACTGAGAA...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR-3UTR TCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAAAGAATAGGCAATGCCTaGCTGGATAGAAAAAGATTC +
Preference number: 2 (lower is better)
Translates to: LANTELVTLKSSVFSFVQRIGNA*LDRKRF
Trigger: GAATCTTTTTCTATCCAGTCAGGCATTGCCTATTCT...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CAA 90 bp TCCATGCTTATTCTAACATCTGTGTCAATTCTAGGTCAGTTTCAGTaGATTATTTTCCTCCATTATGGGTCACTGCTTTCCTATCTTTTT +
Preference number: 2 (lower is better)
Translates to: SMLILTSVSILGQFQ*IIFLHYGSLLSYLF
Trigger: AAAAAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACCTAGAATTGACACAGATGTTAGAATAAGCATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR TCA 72 bp GGAGACCCAGAAGATGGACCATCCAGGATAGAGACATaGAGGGCAGAAGAGGGCCCAGGGATGTGTGTCCCT +
Preference number: 3 (lower is better)
Translates to: GDPEDGPSRIET*RAEEGPGMCVP
Trigger: AGGGACACACATCCCTGGGCCCTCTTCTGCCCTTCATGTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR TCA 72 bp ATTGGCCAGACCCACCTCCCATGGGACTGCCTCTTGTaGAGCACACAAAGGGCAGATACCAAACGGTACCGT +
Preference number: 3 (lower is better)
Translates to: IGQTHLPWDCLL*STQRADTKRYR
Trigger: ACGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTCTGGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CCA 72 bp TCTCCCTGGCTCTACCTCAGTTACCTCAGCCTTACATaGTCTGGAAACTCCCTCAGGCAGAGGGTAGGGCAA +
Preference number: 3 (lower is better)
Translates to: SPWLYLSYLSLT*SGNSLRQRVGQ
Trigger: TTGCCCTACCCTCTGCCTGAGGGAGTTTCCAGACCATGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CCA 72 bp CTGGCTCTACCTCAGTTACCTCAGCCTTACATGGTCTaGAAACTCCCTCAGGCAGAGGGTAGGGCAATCATA +
Preference number: 3 (lower is better)
Translates to: LALPQLPQPYMV*KLPQAEGRAII
Trigger: TATGATTGCCCTACCCTCTGCCTGAGGGAGTTTCCAGACCATGTAAGGCTGAGGTAACTGAGGTAGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR-3UTR CAA 90 bp TTTTCTGGTGTGGCTGATAGGAACTGGCACTGTTCCTGGCCCTGTGTGAGCACCCTTCTATCTCCAGCCTaGAGTAGATTTTCACAGGCA +
Preference number: 3 (lower is better)
Translates to: FSGVADRNWHCSWPCVSTLLSPA*SRFSQA
Trigger: TGCCTGTGAAAATCTACTCAAGGCTGGAGATAGAAG...GGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATCAGCCACACCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CCA 72 bp ACTCCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTaGCTCTACCTCAGTTACCTCAGCCTTACATGGTCT +
Preference number: 3 (lower is better)
Translates to: TPRSIPQLSKSP*LYLSYLSLTWS
Trigger: AGACCATGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR TCA 72 bp AAACTCCCTCAGGCAGAGGGTAGGGCAATCATAGGCTaGCCTCATTTGTTTCACATTTCTCAGGAATCACCG +
Preference number: 3 (lower is better)
Translates to: KLPQAEGRAIIG*PHLFHISQESP
Trigger: CGGTGATTCCTGAGAAATGTGAAACAAATGAGGTCAGCCTATGATTGCCCTACCCTCTGCCTGAGGGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR TCA 72 bp CCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCGTaGACTCCCAGGTCTATTCCTCAACTCAGCAAGTCT +
Preference number: 3 (lower is better)
Translates to: PVLCELSLLCSP*TPRSIPQLSKS
Trigger: AGACTTGCTGAGTTGAGGAATAGACCTGGGAGTTCACGGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR GCA 72 bp CTCCATTATGGGTCACTGCTTTCCTATCTTTTTGCATaGATATTTGACTGGATGCCAGACATTGTGAATTTA +
Preference number: 3 (lower is better)
Translates to: LHYGSLLSYLFA*IFDWMPDIVNL
Trigger: TAAATTCACAATGTCTGGCATCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCAGTGACCCATAATGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR TCA 72 bp TGGGTCACTGCTTTCCTATCTTTTTGCATGCATATTTaGCTGGATGCCAGACATTGTGAATTTATATTGTTA +
Preference number: 3 (lower is better)
Translates to: WVTAFLSFCMHI*LDARHCEFILL
Trigger: TAACAATATAAATTCACAATGTCTGGCATCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCAGTGACCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CCA 72 bp TTTGTTTATTTCTACCAATTTTCTAGGGCTTTATCCTaGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACC +
Preference number: 3 (lower is better)
Translates to: FVYFYQFSRALS*DAVKLVGKSLT
Trigger: GGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCTAGAAAATTGGTAGAAATAAACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CCA 72 bp TCTAGGTCAGTTTCAGTTGATTATTTTCCTCCATTATaGGTCACTGCTTTCCTATCTTTTTGCATGCATATT +
Preference number: 3 (lower is better)
Translates to: SRSVSVDYFPPL*VTAFLSFCMHI
Trigger: AATATGCATGCAAAAAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCGAGAGGCCAGCAAGCTaGGAGCGGCCGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAERPAS*ERPRGG
Trigger: GCCTCCCCGCGGCCGCTCGCAGCTTGCTGGCCTCTC...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGGCGGGCGCCGATGGGTaGCGACATTCGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPAGADG*RHSGQG
Trigger: CCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGC...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGGGCGCCCAGTTGCGGTaGAGGCAGCCGCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPGAQLR*RQPRQK
Trigger: CTTCTGCCGCGGCTGCCTGCACCGCAACTGGGCGCC...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAAGACGGAGTCCGACGTaGGGCGCGGGAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGRRSPT*GAGEAS
Trigger: GCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCT...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGAGACGGAGTCCGACGTaGGGCGCGGGAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQRRSPT*GAGEAS
Trigger: GCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCT...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CTCCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCGCGGGCGCCGATGGGTaGCGACATTCGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRSRILPSTLRTLTTLFSAGADG*RHSGQG
Trigger: CCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGC...GGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GATAGGAACTGGCACTGTTCCTGGCCCTGTGTGAGCACCAGGAACCGTTCCCTCAGGCACACTGGCCGCTaGTCGTCCTCGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DRNWHCSWPCVSTRNRSLRHTGR*SSSQKS
Trigger: GCTCTTCTGCGAGGACGACCAGCGGCCAGTGTGCCT...GAGGGAACGGTTCCTGGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp CCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCGTAGACGGAGTCCGACGTaGGGCGCGGGAGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLQDTAQYFANSHYFVLRRRSPT*GAGEAS
Trigger: GCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCT...ACGGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp TACCTCAGTTACCTCAGCCTTACATGGTCTGGAAACTCCCTCAGGCAGAGGGTAGGCGCCCAGTTGCGGTaGAGGCAGCCGCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YLSYLSLTWSGNSLRQRVGAQLR*RQPRQK
Trigger: CTTCTGCCGCGGCTGCCTGCACCGCAACTGGGCGCC...TACCCTCTGCCTGAGGGAGTTTCCAGACCATGTAAGGCTGAGGTAACTGAGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCGGCCTCGTCGATGGGTaGCATGGCGTGAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAGLVDG*HGVSLV
Trigger: CACCAGACTCACGCCATGGCACCCATCGACGAGGCC...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTCGTCGATGGGTGCCATaGCGTGAGTCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVRRWVP*RESGAP
Trigger: AGGAGCACCAGACTCACGCCATGGCACCCATCGACG...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CAACTAGGAAGCTCCTCCATAGATGGCGAGGGTTCTCTCTGTGTCCGGCTCTCTTCCATGCTGCTTCCCTaGCGCGGAGACGGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: QLGSSSIDGEGSLCVRLSSMLLP*RGDGVR
Trigger: TCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGA...AGAGAGCCGGACACAGAGAGAACCCTCGCCATCTATGGAGGAGCTTCCTAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp CAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGTCCTCAGCTTCCATaGTGCTTCCCTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QKRAQGCVSLSWTTGKEFCPQLP*CFPAAE
Trigger: CTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACA...AAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAGCACACCAGGCACACTaGCCGCTGGTCGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGAHQAH*PLVVLA
Trigger: TGCGAGGACGACCAGCGGCCAGTGTGCCTGGTGTGC...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGCCTCAGCTTCCATGCTaGTTCCCTGCCGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQPQLPC*FPAAET
Trigger: CGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGG...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGGGCCTCGTCGATGGGTaGCATGGCGTGAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQGLVDG*HGVSLV
Trigger: CACCAGACTCACGCCATGGCACCCATCGACGAGGCC...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCGGCCTCGTCGATGGGTaGCATGGCGTGAGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLGLVDG*HGVSLV
Trigger: CACCAGACTCACGCCATGGCACCCATCGACGAGGCC...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCGAAAAGGTGTGCAGGTaGACTCCGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAEKVCR*TPSTAL
Trigger: CAGCGCTGTGGACGGAGTGCACCTGCACACCTTTTC...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAAGGCACACTGGCCGCTaGTCGTCCTCGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGRHTGR*SSSQKS
Trigger: GCTCTTCTGCGAGGACGACCAGCGGCCAGTGTGCCT...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp TCTGCCAAACAACTAGGAAGCTCCTCCATAGATGGCGAGGGTTCTCTCTGTGTCGCACACCAGGCACACTaGCCGCTGGTCGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SAKQLGSSSIDGEGSLCVAHQAH*PLVVLA
Trigger: TGCGAGGACGACCAGCGGCCAGTGTGCCTGGTGTGC...GACACAGAGAGAACCCTCGCCATCTATGGAGGAGCTTCCTAGTTGTTTGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCGAAGCAGCTCCAGGGTaGGAGCCTGGCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLEAAPG*EPGSSP
Trigger: GGGAGAAGAGCCAGGCTCCCACCCTGGAGCTGCTTC...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATGAGAGGCCAGCAAGCTaGGAGCGGCCGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHERPAS*ERPRGG
Trigger: GCCTCCCCGCGGCCGCTCGCAGCTTGCTGGCCTCTC...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp TCTAGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTGAGAGGCCAGCAAGCTaGGAGCGGCCGCGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRALSWDAVKLVGKSLTPERPAS*ERPRGG
Trigger: GCCTCCCCGCGGCCGCTCGCAGCTTGCTGGCCTCTC...AGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp CTCCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCCCTCAGCTTCCATGCTaGTTCCCTGCCGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: LRSRILPSTLRTLTTLFSPQLPC*FPAAET
Trigger: CGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGG...GGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGATCTTCTCAGTCAGCCTaGCCAGGGCCCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGSSQSA*PGPSWV
Trigger: GACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGA...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCCGTCGATGGGTGCCATaGCGTGAGTCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLRRWVP*RESGAP
Trigger: AGGAGCACCAGACTCACGCCATGGCACCCATCGACG...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGCGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQRRPRR*VPWRES
Trigger: AGACTCACGCCATGGCACCCATCGACGAGGCCTTCG...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CCTCAGCCTTACATGGTCTGGAAACTCCCTCAGGCAGAGGGTAGGGCAATCATACGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PQPYMVWKLPQAEGRAIIRRPRR*VPWRES
Trigger: AGACTCACGCCATGGCACCCATCGACGAGGCCTTCG...TATGATTGCCCTACCCTCTGCCTGAGGGAGTTTCCAGACCATGTAAGGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGCTGGCTCTTGCTGGGTaGGAGTTCCAGGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPLALAG*EFQGSL
Trigger: TAGGCTTCCCTGGAACTCCCACCCAGCAAGAGCCAG...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGTCAGGGGAGACCCAGAAGATaGACCATCCAGGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: GPRDVCPSAGLQGRSFGQGRPRR*TIQDRD
Trigger: GTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCCC...CTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTCCCCCACCTCTAAGATaGGCTTCTTCAATGAAGCGA +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVPPPLR*ASSMKR
Trigger: TCGCTTCATTGAAGAAGCTCATCTTAGAGGTGGGGG...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGGACTGCCTCTTGTaGAGCACACAAAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: QKRAQGCVSLSWTTGKEFWDCLL*STQRAD
Trigger: ATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCA...AAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp TCTGCCAAACAACTAGGAAGCTCCTCCATAGATGGCGAGGGTTCTCTCTGTGTCTGTCCTCAGCTTCCATaGTGCTTCCCTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAKQLGSSSIDGEGSLCVCPQLP*CFPAAE
Trigger: CTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACA...GACACAGAGAGAACCCTCGCCATCTATGGAGGAGCTTCCTAGTTGTTTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATGGCGCCCAGTTGCGGTaGAGGCAGCCGCGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHGAQLR*RQPRQK
Trigger: CTTCTGCCGCGGCTGCCTGCACCGCAACTGGGCGCC...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGGCGGGCGCCGATGGGTaGCGACATTCGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILAGADG*RHSGQG
Trigger: CCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGC...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp ACCTCATTTGTTTCACATTTCTCAGGAATCACCGTCCTTCACTGCCTGACGTCTCCCAGGCGCCGGCGCTaGGTCTTCTCAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSFVSHFSGITVLHCLTSPRRRR*VFSVSL
Trigger: CAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGG...AGACGTCAGGCAGTGAAGGACGGTGATTCCTGAGAAATGTGAAACAAATGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGGAAAAGGTGTGCAGGTaGACTCCGTCCACAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQEKVCR*TPSTAL
Trigger: CAGCGCTGTGGACGGAGTGCACCTGCACACCTTTTC...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTGAACAAGAAAAGGTGTaGAGGTGCACTCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVEQEKV*RCTPST
Trigger: TGTGGACGGAGTGCACCTGCACACCTTTTCTTGTTC...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp ATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCAGCCTTACATCCAGGGTGGGAGCCTaGCTCTTCTCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: IPQLSKSPWLYLSYLSLTSRVGA*LFSPTS
Trigger: AGAGGTGGGGGAGAAGAGCCAGGCTCCCACCCTGGA...TGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAAGAGCTGGCTCTTGCTaGGTGGGAGTTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGRAGSC*VGVPGK
Trigger: CTTCCCTGGAACTCCCACCCAGCAAGAGCCAGCTCT...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGAGAGCTGGCTCTTGCTaGGTGGGAGTTCCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQRAGSC*VGVPGK
Trigger: CTTCCCTGGAACTCCCACCCAGCAAGAGCCAGCTCT...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGCTGTCCCATCTCCATTaGCCAGACCCACCTCCCATG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQLSHLH*PDPPPM
Trigger: CATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAG...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAACAGGTCAACTCCTCCTaGATGTCCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQQVNSS*MSSASM
Trigger: CATGGAAGCTGAGGACATCCAGGAGGAGTTGACCTG...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GTGTTCTCAGTTCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTGCACACCAGGCACACTaGCCGCTGGTCGTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: VFSVPIWLLTSICLPRTSAHQAH*PLVVLA
Trigger: TGCGAGGACGACCAGCGGCCAGTGTGCCTGGTGTGC...AGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGAACTGAGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGTTGCAGCAACATGGATaGAGCTGGAGGCCATTACCC +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPLQQHG*SWRPLP
Trigger: GGGTAATGGCCTCCAGCTCCATCCATGTTGCTGCAA...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAATTGCAGCAACATGGATaGAGCTGGAGGCCATTACCC +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQLQQHG*SWRPLP
Trigger: GGGTAATGGCCTCCAGCTCCATCCATGTTGCTGCAA...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGTCAGGAAGTTGTGCAGCTTTaGAAACTCCGTGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: GPRDVCPSAGLQGRSFGQEVVQL*KLRADS
Trigger: AGAATCAGCACGGAGTTTTCAAAGCTGCACAACTTC...CTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGCCCCCACCTCTAAGATaGGCTTCTTCAATGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPPPPLR*ASSMKR
Trigger: TCGCTTCATTGAAGAAGCTCATCTTAGAGGTGGGGG...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGACTTCTTTTGGATTCTaGAGCAGCTCCAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPTSFGF*SSSRVG
Trigger: TCCCACCCTGGAGCTGCTTCAGAATCCAAAAGAAGT...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAAAGACGAGTTTGGGATaGGCTGTGTCTTCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQKTSLG*AVSSAR
Trigger: CCTAGCTGAAGACACAGCTCATCCCAAACTCGTCTT...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGCAGGTCAACTCCTCCTaGATGTCCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQQVNSS*MSSASM
Trigger: CATGGAAGCTGAGGACATCCAGGAGGAGTTGACCTG...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GTGTTCTCAGTTCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTAGGCACACTGGCCGCTaGTCGTCCTCGCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VFSVPIWLLTSICLPRTSRHTGR*SSSQKS
Trigger: GCTCTTCTGCGAGGACGACCAGCGGCCAGTGTGCCT...AGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGAACTGAGAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GATAGGAACTGGCACTGTTCCTGGCCCTGTGTGAGCACCAGGAACCGTTCCCTCGGTCAACACTTCTTTTaGATTCTGAAGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DRNWHCSWPCVSTRNRSLGQHFF*ILKQLQ
Trigger: CTGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACC...GAGGGAACGGTTCCTGGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGTCAGGGTCAACACTTCTTTTaGATTCTGAAGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPRDVCPSAGLQGRSFGQGQHFF*ILKQLQ
Trigger: CTGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACC...CTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGTATCTCCCTTCCTaGGAGAAGACGAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQTYLPS*EKTSLG
Trigger: TCCCAAACTCGTCTTCTCCCAGGAAGGGAGATACGT...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCCTCAGCAAGTCTCCCTaGCTCTACCTCAGTTACCTC +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLLSKSP*LYLSYL
Trigger: GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAG...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CAA 72 bp CAAAAGCGTCTTGGAAAATTTCCTGTCCCATCTCCATaGGCCAGACCCACCTCCCATGGGACTGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: QKRLGKFPVPSP*ARPTSHGTASC
Trigger: ACAAGAGGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGACGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGTCAGCATCCTGTAAATGCATaGCTTTCTTCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GPRDVCPSAGLQGRSFGQHPVNA*LSSSWP
Trigger: TGGCCAAGATGAAGAAAGTCATGCATTTACAGGATG...CTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAACTTCTTTTGGATTCTaGAGCAGCTCCAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGTSFGF*SSSRVG
Trigger: TCCCACCCTGGAGCTGCTTCAGAATCCAAAAGAAGT...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGCCAAGAACTGGCTaGTGCTGTATTTTTCACGTA +
Preference number: 4 (lower is better)
Translates to: QKRAQGCVSLSWTTGKEFWPRTG*CCIFHV
Trigger: TACGTGAAAAATACAGCATCAGCCAGTTCTTGGCCA...AAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACAAAAGCAGTCTTCTaGGGATTCCTCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQTKAVF*GFLHPA
Trigger: TGCTGGATGGAGGAATCCTCAGAAGACTGCTTTTGT...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGACAAAAGCAGTCTTCTaGGGATTCCTCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPTKAVF*GFLHPA
Trigger: TGCTGGATGGAGGAATCCTCAGAAGACTGCTTTTGT...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGAGCACAGTTAATAGCTaGGGGCAGAGTTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPSTVNS*GQSYGW
Trigger: CCAACCATAACTCTGCCCTCAGCTATTAACTGTGCT...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATTCCATGCTGCTTCCCTaGCGCGGAGACGGAGTCCGA +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHSMLLP*RGDGVR
Trigger: TCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGA...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCTCAACCAGGAAGTTGTaGAGCTTTGAAAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTASTRKL*SFENSV
Trigger: CACGGAGTTTTCAAAGCTGCACAACTTCCTGGTTGA...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTGACTTAAGCCTATACTaGGGGATGTTCACACTACGT +
Preference number: 4 (lower is better)
Translates to: QKRAQGCVSLSWTTGKEFDLSLY*GMFTLR
Trigger: ACGTAGTGTGAACATCCCGCAGTATAGGCTTAAGTC...AAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTGGTCAGTATCCTTCCACTGTGTaGCGTTCTTCACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: GPRDVCPSAGLQGRSFGQYPSTV*RSSLLH
Trigger: ATGTAGAAGTGAAGAACGCCACACAGTGGAAGGATA...CTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTATCCTTCCACTGTGTaGCGTTCTTCACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVYPSTV*RSSLLH
Trigger: ATGTAGAAGTGAAGAACGCCACACAGTGGAAGGATA...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATTCCAGGGTGGGAGCCTaGCTCTTCTCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHSRVGA*LFSPTS
Trigger: AGAGGTGGGGGAGAAGAGCCAGGCTCCCACCCTGGA...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATGAAGCAGCTCCAGGGTaGGAGCCTGGCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHEAAPG*EPGSSP
Trigger: GGGAGAAGAGCCAGGCTCCCACCCTGGAGCTGCTTC...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAGGGAGAAGACGAGTTTaGGATGAGCTGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGGRRRV*DELCLQ
Trigger: CTGAAGACACAGCTCATCCCAAACTCGTCTTCTCCC...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGGGGAGAAGACGAGTTTaGGATGAGCTGTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQGRRRV*DELCLQ
Trigger: CTGAAGACACAGCTCATCCCAAACTCGTCTTCTCCC...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTTCCCAAAAGCGTCTTaGAAAATTTCCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVFPKAS*KISCPI
Trigger: GATGGGACAGGAAATTTTCCAAGACGCTTTTGGGAA...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGTTGAAAACTCCGTGCTaGTTCTCATTCGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPLKTPC*FSFADS
Trigger: AGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAA...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGGAAGTTGTGCAGCTTTaGAAACTCCGTGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPEVVQL*KLRADS
Trigger: AGAATCAGCACGGAGTTTTCAAAGCTGCACAACTTC...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCGTCCCCCACCTCTAAGATaGGCTTCTTCAATGAAGCGA +
Preference number: 4 (lower is better)
Translates to: PLQDTAQYFANSHYFVLRPPPLR*ASSMKR
Trigger: TCGCTTCATTGAAGAAGCTCATCTTAGAGGTGGGGG...ACGGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTCCTGTGACATGTAATTaGTCTATAGAACAAACCTGC +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVPVTCN*SIEQTC
Trigger: GCAGGTTTGTTCTATAGATCAATTACATGTCACAGG...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp ATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCAGCCTTACAGCTACTCAGTGCCCGTaGACTACGAGTTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IPQLSKSPWLYLSYLSLTATQCP*TTSFLV
Trigger: CACCAGAAAACTCGTAGTTCACGGGCACTGAGTAGC...TGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GATAGGAACTGGCACTGTTCCTGGCCCTGTGTGAGCACCAGGAACCGTTCCCTCGGATGCCAGACATTGTaGATTTATATTGTTAGGTGC +
Preference number: 4 (lower is better)
Translates to: DRNWHCSWPCVSTRNRSLGCQTL*IYIVRC
Trigger: GCACCTAACAATATAAATTCACAATGTCTGGCATCC...GAGGGAACGGTTCCTGGTGCTCACACAGGGCCAGGAACAGTGCCAGTTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTCCTCAGCTTCCATGCTaGTTCCCTGCCGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVPQLPC*FPAAET
Trigger: CGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGG...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCTGGAATCAACCTAAATaGCCATCAACAGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAWNQPK*PSTVDW
Trigger: CCAGTCTACTGTTGATGGGCATTTAGGTTGATTCCA...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp TCTAGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTCTTCTCAGTCAGCCTaGCCAGGGCCCAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SRALSWDAVKLVGKSLTPSSQSA*PGPSWV
Trigger: GACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGA...AGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATCGTCGATGGGTGCCATaGCGTGAGTCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHRRWVP*RESGAP
Trigger: AGGAGCACCAGACTCACGCCATGGCACCCATCGACG...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATCGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHRRPRR*VPWRES
Trigger: AGACTCACGCCATGGCACCCATCGACGAGGCCTTCG...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CTGTGTCCGGCTCTCTCCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCATATCCTTCCACTGTGTaGCGTTCTTCACTTCTACAT +
Preference number: 4 (lower is better)
Translates to: LCPALSAPGYCPVLCELSYPSTV*RSSLLH
Trigger: ATGTAGAAGTGAAGAACGCCACACAGTGGAAGGATA...TGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGGAGAGAGCCGGACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp TCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTCTTTAAAAGCTGAAGCAGCTCCAGGGTaGGAGCCTGGCTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SNMAANIHMSSPHISLKAEAAPG*EPGSSP
Trigger: GGGAGAAGAGCCAGGCTCCCACCCTGGAGCTGCTTC...AGCTTTTAAAGAGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGCCTGGATCTCACTCCTaGTCAACACTTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPPGSHS*STLLLD
Trigger: ATCCAAAAGAAGTGTTGACCAGGAGTGAGATCCAGG...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GCAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTCATTTCCTTCATCAATaGTATCTGGCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: AEEGPGMCVPQLDYREGVHFLHQ*YLAHCL
Trigger: AAGACAGTGTGCCAGATACCATTGATGAAGGAAATG...AACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CAGAAGAGGGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTAGGTTTACAGCCACTTaGAATCGCTTTAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: QKRAQGCVSLSWTTGKEFRFTAT*NRFSIS
Trigger: GGAAATGCTAAAGCGATTCCAAGTGGCTGTAAACCT...AAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCCCTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCTTCCCAAAAGCGTCTTaGAAAATTTCCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAFPKAS*KISCPI
Trigger: GATGGGACAGGAAATTTTCCAAGACGCTTTTGGGAA...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp TCTGCCAAACAACTAGGAAGCTCCTCCATAGATGGCGAGGGTTCTCTCTGTGTCGCCACGAGATTACGCTaGGACTTAAGAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SAKQLGSSSIDGEGSLCVATRLR*DLRSFS
Trigger: GGAGAAACTTCTTAAGTCTCAGCGTAATCTCGTGGC...GACACAGAGAGAACCCTCGCCATCTATGGAGGAGCTTCCTAGTTGTTTGGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCTTGAAAACTCCGTGCTaGTTCTCATTCGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLLKTPC*FSFADS
Trigger: AGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAA...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGTGGCCAAGAACTGGCTaGTGCTGTATTTTTCACGTA +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQWPRTG*CCIFHV
Trigger: TACGTGAAAAATACAGCATCAGCCAGTTCTTGGCCA...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCAGCAGAAGGGTAGACTaGGGAAAATATACACAGTAT +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTASRRVD*GKYTQY
Trigger: ATACTGTGTATATTTTCCTCAGTCTACCCTTCTGCT...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CTCCGCTCCAGGATACTGCCCAGTACTTTGCGAACTCTCACTACTTTGTTCTCCTTCACAGGCATGTGCTaGTCAGAACTCTGCCAAACA +
Preference number: 4 (lower is better)
Translates to: LRSRILPSTLRTLTTLFSFTGMC*SELCQT
Trigger: TGTTTGGCAGAGTTCTGATCAGCACATGCCTGTGAA...GGAGAACAAAGTAGTGAGAGTTCGCAAAGTACTGGGCAGTATCCTGGAGCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTGTCCTCAGCTTCCATaGTGCTTCCCTGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVCPQLP*CFPAAE
Trigger: CTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACA...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAACCCAGGCGCCGGCGCTaGGTCTTCTCAGTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LANTELVTLKSSVFSFVQPRRRR*VFSVSL
Trigger: CAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGG...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCTCAACCAGGAAGTTGTaGAGCTTTGAAAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLSTRKL*SFENSV
Trigger: CACGGAGTTTTCAAAGCTGCACAACTTCCTGGTTGA...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGGACTTAAGCCTATACTaGGGGATGTTCACACTACGT +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQDLSLY*GMFTLR
Trigger: ACGTAGTGTGAACATCCCGCAGTATAGGCTTAAGTC...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp TGTTTCACATTTCTCAGGAATCACCGTCCTTCACTGCCTGACGTCTGGTGCTTTCAGGTCAACTCCTCCTaGATGTCCTCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: CFTFLRNHRPSLPDVWCFQVNSS*MSSASM
Trigger: CATGGAAGCTGAGGACATCCAGGAGGAGTTGACCTG...AAAGCACCAGACGTCAGGCAGTGAAGGACGGTGATTCCTGAGAAATGTGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp CCTCAGCCTTACATGGTCTGGAAACTCCCTCAGGCAGAGGGTAGGGCAATCATACCTGGATCTCACTCCTaGTCAACACTTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PQPYMVWKLPQAEGRAIIPGSHS*STLLLD
Trigger: ATCCAAAAGAAGTGTTGACCAGGAGTGAGATCCAGG...TATGATTGCCCTACCCTCTGCCTGAGGGAGTTTCCAGACCATGTAAGGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCTTCATCAATGGTATCTaGCACACTGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTAFINGI*HTVFTF
Trigger: AAAGGTGAAGACAGTGTGCCAGATACCATTGATGAA...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCCATCCTGTAAATGCATaGCTTTCTTCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLHPVNA*LSSSWP
Trigger: TGGCCAAGATGAAGAAAGTCATGCATTTACAGGATG...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGTCTTTGTTCAATCTCTaGAGAAACAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPSLFNL*RNRSSS
Trigger: AGAAGAGGACCTGTTTCTTCAGAGATTGAACAAAGA...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GACCCACCTCCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAACAAATTTCACAAAAGTaGCTTAAGCCTATACTGCGG +
Preference number: 4 (lower is better)
Translates to: DPPPMGLPLVKHTKGRYQQISQK*LKPILR
Trigger: CCGCAGTATAGGCTTAAGTCACTTTTGTGAAATTTG...TTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGGAGGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGCCTGTGACATGTAATTaGTCTATAGAACAAACCTGC +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPPVTCN*SIEQTC
Trigger: GCAGGTTTGTTCTATAGATCAATTACATGTCACAGG...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CTCCCTGGCTCTACCTCAGTTACCTCAGCCTTACATGGTCTGGAAACTCCCTCATTCTATCTCCAGCCTTaGGTAGATTTTCACAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPGSTSVTSALHGLETPSFYLQP*VDFHRH
Trigger: ATGCCTGTGAAAATCTACTCAAGGCTGGAGATAGAA...TGAGGGAGTTTCCAGACCATGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGAAGGTTTACAGCCACTTaGAATCGCTTTAGCATTTCC +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGRFTAT*NRFSIS
Trigger: GGAAATGCTAAAGCGATTCCAAGTGGCTGTAAACCT...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTCTGGCTCTTGCTGGGTaGGAGTTCCAGGGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVLALAG*EFQGSL
Trigger: TAGGCTTCCCTGGAACTCCCACCCAGCAAGAGCCAG...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTTGGTGGCTGATAGGAACTaGCACTGTTCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RALSWDAVKLVGKSLTPLVADRN*HCSWPC
Trigger: ACAGGGCCAGGAACAGTGCCAGTTCCTATCAGCCAC...CAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp ACCTCATTTGTTTCACATTTCTCAGGAATCACCGTCCTTCACTGCCTGACGTCTACTTCTTTTGGATTCTaGAGCAGCTCCAGGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSFVSHFSGITVLHCLTSTSFGF*SSSRVG
Trigger: TCCCACCCTGGAGCTGCTTCAGAATCCAAAAGAAGT...AGACGTCAGGCAGTGAAGGACGGTGATTCCTGAGAAATGTGAAACAAATGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATTGGGACTGCCTCTTGTaGAGCACACAAAGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHWDCLL*STQRAD
Trigger: ATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCA...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACAAATTTCACAAAAGTaGCTTAAGCCTATACTGCGG +
Preference number: 4 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGQISQK*LKPILR
Trigger: CCGCAGTATAGGCTTAAGTCACTTTTGTGAAATTTG...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CCCATGGGACTGCCTCTTGTGAAGCACACAAAGGGCAGATACCAAACGGTACCGTGTACAAATAGGATTTaGCTTTCCATCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: PMGLPLVKHTKGRYQTVPCTNRI*LSISLS
Trigger: ACTCAGTGAGATGGAAAGTCAAATCCTATTTGTACA...CGGTACCGTTTGGTATCTGCCCTTTGTGTGCTTCACAAGAGGCAGTCCCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp CTCCCTGGCTCTACCTCAGTTACCTCAGCCTTACATGGTCTGGAAACTCCCTCAATTAATCCCATCCAGTaGATTCTTCGCCTTAATCAC +
Preference number: 4 (lower is better)
Translates to: LPGSTSVTSALHGLETPSINPIQ*ILRLNH
Trigger: GTGATTAAGGCGAAGAATGCACTGGATGGGATTAAT...TGAGGGAGTTTCCAGACCATGTAAGGCTGAGGTAACTGAGGTAGAGCCAGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAATCCAGGGTGGGAGCCTaGCTCTTCTCCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LANTELVTLKSSVFSFVQSRVGA*LFSPTS
Trigger: AGAGGTGGGGGAGAAGAGCCAGGCTCCCACCCTGGA...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGACTGCCAGAGTAGATAAGAACTaGATTTTAATCCCAACACTG +
Preference number: 4 (lower is better)
Translates to: GKFPVPSPLARPTSHGTARVDKN*ILIPTL
Trigger: CAGTGTTGGGATTAAAATCCAGTTCTTATCTACTCT...GGCAGTCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGTCCTCCTGCTTAAAATaGTACAAGAGCAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQSSCLK*YKSSLI
Trigger: AATTAGGCTGCTCTTGTACCATTTTAAGCAGGAGGA...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS-3UTR GCA 90 bp CCCAGGTCTATTCCTCAACTCAGCAAGTCTCCCTGGCTCTACCTCAGTTACCTCTCCTATCTTTTTGCATaGATATTTGACTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: PRSIPQLSKSPWLYLSYLSYLFA*IFDWMP
Trigger: TGGCATCCAGTCAAATATGCATGCAAAAAGATAGGA...GAGGTAACTGAGGTAGAGCCAGGGAGACTTGCTGAGTTGAGGAATAGACCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATACGTATCTCCCTTCCTaGGAGAAGACGAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHTYLPS*EKTSLG
Trigger: TCCCAAACTCGTCTTCTCCCAGGAAGGGAGATACGT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp TCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTCTTTAAAAGCTGGGAGACCCAGAAGATaGACCATCCAGGATAGAGAC +
Preference number: 4 (lower is better)
Translates to: SNMAANIHMSSPHISLKAGRPRR*TIQDRD
Trigger: GTCTCTATCCTGGATGGTCCATCTTCTGGGTCTCCC...AGCTTTTAAAGAGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGTTCTCAGTTCCAATATaGCTGCTAACATCCATATGT +
Preference number: 4 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQFSVPI*LLTSIC
Trigger: ACATATGGATGTTAGCAGCCATATTGGAACTGAGAA...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CTGCTTTCCTATCTTTTTGCATGCATATTTGACTGGATGCCAGACATTGTGAATAACTGGCACTGTTCCTaGCCCTGTGTGAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LLSYLFACIFDWMPDIVNNWHCS*PCVSTR
Trigger: CCTGGTGCTCACACAGGGCCAGGAACAGTGCCAGTT...ATTCACAATGTCTGGCATCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATGCCACGAGATTACGCTaGGACTTAAGAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHATRLR*DLRSFS
Trigger: GGAGAAACTTCTTAAGTCTCAGCGTAATCTCGTGGC...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTAAGACGAGTTTGGGATaGGCTGTGTCTTCAGCTAGG +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVKTSLG*AVSSAR
Trigger: CCTAGCTGAAGACACAGCTCATCCCAAACTCGTCTT...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GTGTTCTCAGTTCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTAATAAATCGCCCAGATaGCCACATCTGGGGACATTT +
Preference number: 4 (lower is better)
Translates to: VFSVPIWLLTSICLPRTSNKSPR*PHLGTF
Trigger: AAATGTCCCCAGATGTGGGCATCTGGGCGATTTATT...AGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGAACTGAGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGGAACAAGAAAAGGTGTaGAGGTGCACTCCGTCCACA +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILEQEKV*RCTPST
Trigger: TGTGGACGGAGTGCACCTGCACACCTTTTCTTGTTC...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AGTTGTGATGAGAGTCATATGCAACAGCATATGAAGAGGCTAGCAAAAGATATTCTGTCCCATCTCCATTaGCCAGACCCACCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SCDESHMQQHMKRLAKDILSHLH*PDPPPM
Trigger: CATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAG...AATATCTTTTGCTAGCCTCTTCATATGCTGTTGCATATGACTCTCATCACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATTTGAAAACTCCGTGCTaGTTCTCATTCGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHLKTPC*FSFADS
Trigger: AGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAA...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATAATAAATCGCCCAGATaGCCACATCTGGGGACATTT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHNKSPR*PHLGTF
Trigger: AAATGTCCCCAGATGTGGGCATCTGGGCGATTTATT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATCCTGGATCTCACTCCTaGTCAACACTTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHPGSHS*STLLLD
Trigger: ATCCAAAAGAAGTGTTGACCAGGAGTGAGATCCAGG...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp TTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTTGGGTCTTGAAGTTGTGCAGCTTTaGAAACTCCGTGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LSWDAVKLVGKSLTPLGLEVVQL*KLRADS
Trigger: AGAATCAGCACGGAGTTTTCAAAGCTGCACAACTTC...AAGACCCAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATACACAGGGTAAGTGCTaGAATCTCTCTACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHTQGKC*NLSTKA
Trigger: TGCTTTTGTAGAGAGATTTCAGCACTTACCCTGTGT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTCAACCAGGAAGTTGTaGAGCTTTGAAAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILSTRKL*SFENSV
Trigger: CACGGAGTTTTCAAAGCTGCACAACTTCCTGGTTGA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CAA 72 bp GATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTaGGGTCTTGCTTTCATGATTTGTAAGGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: DAVKLVGKSLTP*GLAFMICKVGV
Trigger: CACACCCACCTTACAAATCATGAAAGCAAGACCCAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTCATCCTGTAAATGCATaGCTTTCTTCATCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVHPVNA*LSSSWP
Trigger: TGGCCAAGATGAAGAAAGTCATGCATTTACAGGATG...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp AGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTTGTCTTTGTTCAATCTCTaGAGAAACAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RALSWDAVKLVGKSLTPLSLFNL*RNRSSS
Trigger: AGAAGAGGACCTGTTTCTTCAGAGATTGAACAAAGA...CAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATGATGAGCTTCTTCAATaGAGCGATAGTTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHDELLQ*SDSLIE
Trigger: CTCAATCAAACTATCGCTTCATTGAAGAAGCTCATC...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp AGGGCTTTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTTGACCCCTTTGGATGAGCTTCTTCAATaGAGCGATAGTTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: RALSWDAVKLVGKSLTPLDELLQ*SDSLIE
Trigger: CTCAATCAAACTATCGCTTCATTGAAGAAGCTCATC...CAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAAAGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp GTGTTCTCAGTTCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTTCCTCGTTAAATCACTaGCTGAAAGTCTTTACTGAA +
Preference number: 4 (lower is better)
Translates to: VFSVPIWLLTSICLPRTSSSLNH*LKVFTE
Trigger: TTCAGTAAAGACTTTCAGGCAGTGATTTAACGAGGA...AGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGAACTGAGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp GAGCTGGAGGCCATTACCCTAAGCAAACCAACACATGAACAGAAAACCAAACATAGAAGTTTCTCCTCCTaGTTAAAATGGTACAAGAGC +
Preference number: 4 (lower is better)
Translates to: ELEAITLSKPTHEQKTKHRSFSS*LKWYKS
Trigger: GCTCTTGTACCATTTTAAGCAGGAGGAGAAACTTCT...ATGTTTGGTTTTCTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS-3UTR GCA 90 bp ACCTCATTTGTTTCACATTTCTCAGGAATCACCGTCCTTCACTGCCTGACGTCTTCCATTATGGGTCACTaGTTTCCTATCTTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TSFVSHFSGITVLHCLTSSIMGH*FPIFLH
Trigger: ATGCAAAAAGATAGGAAAGCAGTGACCCATAATGGA...AGACGTCAGGCAGTGAAGGACGGTGATTCCTGAGAAATGTGAAACAAATGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTTCCATTCATCCACGTaGATGTCAAAGTTACCTGTC +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILFHSST*MSKLPV
Trigger: GACAGGTAACTTTGACATCCACGTGGATGAATGGAA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS-3UTR TCA 90 bp TCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTCTTTAAAAGCTGATGAGCTTCTTCAATaGAGCGATAGTTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SNMAANIHMSSPHISLKADELLQ*SDSLIE
Trigger: CTCAATCAAACTATCGCTTCATTGAAGAAGCTCATC...AGCTTTTAAAGAGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp TCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTCTTTAAAAGCTAGAATAGGCAATGCCTaGCTGGATAGAAAAAGATTC +
Preference number: 4 (lower is better)
Translates to: SNMAANIHMSSPHISLKARIGNA*LDRKRF
Trigger: GAATCTTTTTCTATCCAGTCAGGCATTGCCTATTCT...AGCTTTTAAAGAGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAAAGCACAGTTAATAGCTaGGGGCAGAGTTATGGTTGG +
Preference number: 4 (lower is better)
Translates to: LANTELVTLKSSVFSFVQSTVNS*GQSYGW
Trigger: CCAACCATAACTCTGCCCTCAGCTATTAACTGTGCT...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTTCATCAATGGTATCTaGCACACTGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILFINGI*HTVFTF
Trigger: AAAGGTGAAGACAGTGTGCCAGATACCATTGATGAA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGCATTTCCTTCATCAATaGTATCTGGCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILHFLHQ*YLAHCL
Trigger: AAGACAGTGTGCCAGATACCATTGATGAAGGAAATG...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGTGTACAAATAGGATTTaGCTTTCCATCTCACTGAGT +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILCTNRI*LSISLS
Trigger: ACTCAGTGAGATGGAAAGTCAAATCCTATTTGTACA...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR GCA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTCCTCGTTAAATCACTaGCTGAAAGTCTTTACTGAA +
Preference number: 4 (lower is better)
Translates to: TAIYQLANTELVTLKSSVSSLNH*LKVFTE
Trigger: TTCAGTAAAGACTTTCAGGCAGTGATTTAACGAGGA...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp AGTTGTGATGAGAGTCATATGCAACAGCATATGAAGAGGCTAGCAAAAGATATTGGTCAACACTTCTTTTaGATTCTGAAGCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCDESHMQQHMKRLAKDIGQHFF*ILKQLQ
Trigger: CTGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACC...AATATCTTTTGCTAGCCTCTTCATATGCTGTTGCATATGACTCTCATCACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp TCCAATATGGCTGCTAACATCCATATGTCTTCCCCGCACATCTCTTTAAAAGCTTTCTCAGTTCCAATATaGCTGCTAACATCCATATGT +
Preference number: 4 (lower is better)
Translates to: SNMAANIHMSSPHISLKAFSVPI*LLTSIC
Trigger: ACATATGGATGTTAGCAGCCATATTGGAACTGAGAA...AGCTTTTAAAGAGATGTGCGGGGAAGACATATGGATGTTAGCAGCCATATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
3UTR CAA 72 bp TTATCCTGGGATGCAGTTAAGTTAGTTGGAAAGAGTTaGACCCCTTTGGGTCTTGCTTTCATGATTTGTAAG +
Preference number: 4 (lower is better)
Translates to: LSWDAVKLVGKS*TPLGLAFMICK
Trigger: CTTACAAATCATGAAAGCAAGACCCAAAGGGGTCAAACTCTTTCCAACTAACTTAACTGCATCCCAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR GCA 90 bp AGTTGTGATGAGAGTCATATGCAACAGCATATGAAGAGGCTAGCAAAAGATATTTGGAATCAACCTAAATaGCCATCAACAGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: SCDESHMQQHMKRLAKDIWNQPK*PSTVDW
Trigger: CCAGTCTACTGTTGATGGGCATTTAGGTTGATTCCA...AATATCTTTTGCTAGCCTCTTCATATGCTGTTGCATATGACTCTCATCACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGTCAGTTTCAGTTGATTATTTTCCTCCATTATGGGTCACTGCTTTCCTATCTTTTCATCAATGGTATCTaGCACACTGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GQFQLIIFLHYGSLLSYLFINGI*HTVFTF
Trigger: AAAGGTGAAGACAGTGTGCCAGATACCATTGATGAA...AAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp CTGCTTTCCTATCTTTTTGCATGCATATTTGACTGGATGCCAGACATTGTGAATCATTTCCTTCATCAATaGTATCTGGCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLSYLFACIFDWMPDIVNHFLHQ*YLAHCL
Trigger: AAGACAGTGTGCCAGATACCATTGATGAAGGAAATG...ATTCACAATGTCTGGCATCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CCA 90 bp GATAAGAACTGGATTTTAATCCCAACACTGCCATTTACCAGCTGGCCAATACTGAGAGTAGATAAGAACTaGATTTTAATCCCAACACTG +
Preference number: 4 (lower is better)
Translates to: DKNWILIPTLPFTSWPILRVDKN*ILIPTL
Trigger: CAGTGTTGGGATTAAAATCCAGTTCTTATCTACTCT...CAGTATTGGCCAGCTGGTAAATGGCAGTGTTGGGATTAAAATCCAGTTCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp GGTCAGTTTCAGTTGATTATTTTCCTCCATTATGGGTCACTGCTTTCCTATCTTTCTAGGGCTTTATCCTaGGATGCAGTTAAGTTAGTT +
Preference number: 4 (lower is better)
Translates to: GQFQLIIFLHYGSLLSYLSRALS*DAVKLV
Trigger: AACTAACTTAACTGCATCCCAGGATAAAGCCCTAGA...AAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR TCA 90 bp CTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTTCTCATTTGTACAATCTTTGTTCAATCTCTaGAGAAACAGGTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LANTELVTLKSSVFSFVQSLFNL*RNRSSS
Trigger: AGAAGAGGACCTGTTTCTTCAGAGATTGAACAAAGA...TTGTACAAATGAGAAAACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR TCA 90 bp AGTTGTGATGAGAGTCATATGCAACAGCATATGAAGAGGCTAGCAAAAGATATTAGCAGAAGGGTAGACTaGGGAAAATATACACAGTAT +
Preference number: 4 (lower is better)
Translates to: SCDESHMQQHMKRLAKDISRRVD*GKYTQY
Trigger: ATACTGTGTATATTTTCCTCAGTCTACCCTTCTGCT...AATATCTTTTGCTAGCCTCTTCATATGCTGTTGCATATGACTCTCATCACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CCA 90 bp CTGCTTTCCTATCTTTTTGCATGCATATTTGACTGGATGCCAGACATTGTGAATTATTTTCCTCCATTATaGGTCACTGCTTTCCTATCT +
Preference number: 4 (lower is better)
Translates to: LLSYLFACIFDWMPDIVNYFPPL*VTAFLS
Trigger: AGATAGGAAAGCAGTGACCCATAATGGAGGAAAATA...ATTCACAATGTCTGGCATCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354241.5
3UTR CAA 72 bp ATTCTAACATCTGTGTCAATTCTAGGTCAGTTTCAGTaGATTATTTTCCTCCATTATGGGTCACTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: ILTSVSILGQFQ*IIFLHYGSLLS
Trigger: GGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACCTAGAATTGACACAGATGTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS GCA 90 bp CTGGCCAGGGCCCAGTTGGGTCGCAGCGCGGCGGGCGCCGATGGGTaGCGACATTCGGGGCAGGGGAACGGGCCGCCGCCCGGCGCCCAG +
Preference number: 5 (lower is better)
Translates to: LARAQLGRSAAGADG*RHSGQGNGPPPGAQ
Trigger: CTGGGCGCCGGGCGGCGGCCCGTTCCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGCCGCGCTGCGACCCAACTGGGCCCTGGCCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 90 bp CAGCCTGGCCAGGGCCCAGTTGGGTCGCAGCGCGGCGGGCGCCGATaGGTGCCGACATTCGGGGCAGGGGAACGGGCCGCCGCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: QPGQGPVGSQRGGRR*VPTFGAGERAAARR
Trigger: GCGCCGGGCGGCGGCCCGTTCCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGCCGCGCTGCGACCCAACTGGGCCCTGGCCAGGCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 90 bp TGGCGGCCGCACAGGCCCGGGGGCACGGGGCCCAGGCGCCGGCGCTaGGTCTTCTCAGTCAGCCTGGCCAGGGCCCAGTTGGGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: WRPHRPGGTGPRRRR*VFSVSLARAQLGRS
Trigger: GCTGCGACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGGCCCCGTGCCCCCGGGCCTGTGCGGCCGCCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 90 bp GGGGCACGGGGCCCAGGCGCCGGCGCTGCGTCTTCTCAGTCAGCCTaGCCAGGGCCCAGTTGGGTCGCAGCGCGGCGGGCGCCGATGGGT +
Preference number: 5 (lower is better)
Translates to: GARGPGAGAASSQSA*PGPSWVAARRAPMG
Trigger: ACCCATCGGCGCCCGCCGCGCTGCGACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGGCCCCGTGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 90 bp CGCGGAGACGGAGTCCGACGTGAGGCGCGGGAGAGGCCAGCAAGCTaGGAGCGGCCGCGGGGAGGCCAGACGACTTCCGAACCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RGDGVRREARERPAS*ERPRGGQTTSEPPS
Trigger: TGACGGCGGTTCGGAAGTCGTCTGGCCTCCCCGCGGCCGCTCGCAGCTTGCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCTCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS TCA 90 bp CTCAGCTTCCATGCTGCTTCCCTGCCGCGGAGACGGAGTCCGACGTaGGGCGCGGGAGAGGCCAGCAAGCTGCGAGCGGCCGCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSFHAASLPRRRSPT*GAGEASKLRAAAGR
Trigger: CCTCCCCGCGGCCGCTCGCAGCTTGCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 90 bp CAGGTCAACTCCTCCTGGATGTCCTCAGCTTCCATGCTGCTTCCCTaGCGCGGAGACGGAGTCCGACGTGAGGCGCGGGAGAGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: QVNSSWMSSASMLLP*RGDGVRREARERPA
Trigger: TGCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACATCCAGGAGGAGTTGACCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 90 bp GGATGTCAAAGTTACCTGTCCGGTAGCTCTCGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCTGGTGCTCCTGGGACTCCCTGCACA +
Preference number: 5 (lower is better)
Translates to: GCQSYLSGSSRRPRR*VPWRESGAPGTPCT
Trigger: TGTGCAGGGAGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGACAGGTAACTTTGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS-3UTR CAA 90 bp AAGGGCAGATACCAAACGGTACCGTTAGGGAGACCCAGAAGATGGACCATCCAGGTGGAGAGCTGGCTCTaGCTGGGTGGGAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KGRYQTVPLGRPRRWTIQVESWL*LGGSSR
Trigger: CCTGGAACTCCCACCCAGCAAGAGCCAGCTCTCCAC...CTGGATGGTCCATCTTCTGGGTCTCCCTAACGGTACCGTTTGGTATCTGCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS TCA 90 bp TCAGTTAGTGAAGATGAGATCACCCCCACTCGTAACTGTCTCACCTaGAGCAGCTCCAGGGTGGGAGCCTGGCTCTTCTCCCCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SVSEDEITPTRNCLT*SSSRVGAWLFSPTS
Trigger: AGAGGTGGGGGAGAAGAGCCAGGCTCCCACCCTGGAGCTGCTTCAGGTGAGACAGTTACGAGTGGGGGTGATCTCATCTTCACTAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000496896.1
CDS TCA 90 bp GAGTCATCGAAGAGCCCCTCAAGGATGAAGTCTGCCAGAGAGGTCTaGTTCTTCTGCCACATTGTCCCCTTTCTCAATCCCTTGGAATCG +
Preference number: 5 (lower is better)
Translates to: ESSKSPSRMKSAREV*FFCHIVPFLNPLES
Trigger: CGATTCCAAGGGATTGAGAAAGGGGACAATGTGGCAGAAGAATCAGACCTCTCTGGCAGACTTCATCCTTGAGGGGCTCTTCGATGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447480.5
CDS GCA 90 bp AAGGTGGGTAAGGGAGTCATCGAAGAGCCCCTCAAGGATGAAGTCTaGCAGAGAGGTCTGATTCTTCTGCCACATTGTCCCCTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: KVGKGVIEEPLKDEV*QRGLILLPHCPLSQ
Trigger: TTGAGAAAGGGGACAATGTGGCAGAAGAATCAGACCTCTCTGGCAGACTTCATCCTTGAGGGGCTCTTCGATGACTCCCTTACCCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447480.5
CDS-3UTR CAA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTGTGGAGAGCTGGCTCTaGCTGGGTGGGAGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: TAIYQLANTELVTLKSSVVESWL*LGGSSR
Trigger: CCTGGAACTCCCACCCAGCAAGAGCCAGCTCTCCAC...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS-3UTR CAA 90 bp GTCTTGGAAAATTTCCTGTCCCATCTCCATTGGCCAGACCCACCTCCCATGGGATGGTCAACACTTCTTTaGGATTCTGAAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: VLENFLSHLHWPDPPPMGWSTLL*DSEAAP
Trigger: TGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACCA...TCCCATGGGAGGTGGGTCTGGCCAATGGAGATGGGACAGGAAATTTTCCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS CCA 90 bp ATGCTGTATTTTTCACGTATCTCCCTTCCTGGGAGAAGACGAGTTTaGGATGAGCTGTGTCTTCAGCTAGGTTTACAGCCACTTGGAATC +
Preference number: 5 (lower is better)
Translates to: MLYFSRISLPGRRRV*DELCLQLGLQPLGI
Trigger: GATTCCAAGTGGCTGTAAACCTAGCTGAAGACACAGCTCATCCCAAACTCGTCTTCTCCCAGGAAGGGAGATACGTGAAAAATACAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS TCA 90 bp CCTCTTCTTCAACCAGGAAGTTGTGCAGCTTTGAAAACTCCGTGCTaGTTCTCATTCGCTGACTCTTTATCTTATCCTTCCACTGTGTGG +
Preference number: 5 (lower is better)
Translates to: PLLQPGSCAALKTPC*FSFADSLSYPSTVW
Trigger: CCACACAGTGGAAGGATAAGATAAAGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAAAGCTGCACAACTTCCTGGTTGAAGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
ENST00000447480.5
ENST00000496896.1
CDS-3UTR CAA 90 bp ACTGCCATTTACCAGCTGGCCAATACTGAGCTAGTTACTCTAAAGAGTTCAGTTTGGTCAACACTTCTTTaGGATTCTGAAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: TAIYQLANTELVTLKSSVWSTLL*DSEAAP
Trigger: TGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACCA...AACTGAACTCTTTAGAGTAACTAGCTCAGTATTGGCCAGCTGGTAAATGGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS TCA 90 bp TCCTGTAAATGCATGACTTTCTTCATCTTGGCCACGAGATTACGCTaGGACTTAAGAAGTTTCTCCTCCTGCTTAAAATGGTACAAGAGC +
Preference number: 5 (lower is better)
Translates to: SCKCMTFFILATRLR*DLRSFSSCLKWYKS
Trigger: GCTCTTGTACCATTTTAAGCAGGAGGAGAAACTTCTTAAGTCTCAGCGTAATCTCGTGGCCAAGATGAAGAAAGTCATGCATTTACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS-3UTR CAA 90 bp GGTCAGTTTCAGTTGATTATTTTCCTCCATTATGGGTCACTGCTTTCCTATCTTTGGTCAACACTTCTTTaGGATTCTGAAGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GQFQLIIFLHYGSLLSYLWSTLL*DSEAAP
Trigger: TGGAGCTGCTTCAGAATCCAAAAGAAGTGTTGACCA...AAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CAA 90 bp GGTCAGTTTCAGTTGATTATTTTCCTCCATTATGGGTCACTGCTTTCCTATCTTCTTCTATCTCCAGCCTaGAGTAGATTTTCACAGGCA +
Preference number: 5 (lower is better)
Translates to: GQFQLIIFLHYGSLLSYLLLSPA*SRFSQA
Trigger: TGCCTGTGAAAATCTACTCAAGGCTGGAGATAGAAG...AAGATAGGAAAGCAGTGACCCATAATGGAGGAAAATAATCAACTGAAACTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS-3UTR CAA 90 bp AGGGCTAAATATTTTCTGCTAATGAGGCAAGATTTTCCTGAGTACGCTACTCAGTGCTTTCCTATCTTTTaGCATGCATATTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: RAKYFLLMRQDFPEYATQCFPIF*HAYLTG
Trigger: TCCAGTCAAATATGCATGCAAAAAGATAGGAAAGCA...CTGAGTAGCGTACTCAGGAAAATCTTGCCTCATTAGCAGAAAATATTTAGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354241.5
CDS CCA 72 bp CAGGGCCCAGTTGGGTCGCAGCGCGGCGGGCGCCGATaGGTGCCGACATTCGGGGCAGGGGAACGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: QGPVGSQRGGRR*VPTFGAGERAA
Trigger: GGCGGCCCGTTCCCCTGCCCCGAATGTCGGCACCCATCGGCGCCCGCCGCGCTGCGACCCAACTGGGCCCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 72 bp GGCCCAGGCGCCGGCGCTGCGTCTTCTCAGTCAGCCTaGCCAGGGCCCAGTTGGGTCGCAGCGCGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GPGAGAASSQSA*PGPSWVAARRA
Trigger: CGCCCGCCGCGCTGCGACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 72 bp CACAGGCCCGGGGGCACGGGGCCCAGGCGCCGGCGCTaGGTCTTCTCAGTCAGCCTGGCCAGGGCCCAGTTG +
Preference number: 6 (lower is better)
Translates to: HRPGGTGPRRRR*VFSVSLARAQL
Trigger: CAACTGGGCCCTGGCCAGGCTGACTGAGAAGACGCAGCGCCGGCGCCTGGGCCCCGTGCCCCCGGGCCTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 72 bp GCTGCGTCTTCTCAGTCAGCCTGGCCAGGGCCCAGTTaGGTCGCAGCGCGGCGGGCGCCGATGGGTGCCGAC +
Preference number: 6 (lower is better)
Translates to: AASSQSAWPGPS*VAARRAPMGAD
Trigger: GTCGGCACCCATCGGCGCCCGCCGCGCTGCGACCCAACTGGGCCCTGGCCAGGCTGACTGAGAAGACGCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS TCA 72 bp CATGCTGCTTCCCTGCCGCGGAGACGGAGTCCGACGTaGGGCGCGGGAGAGGCCAGCAAGCTGCGAGCGGCC +
Preference number: 6 (lower is better)
Translates to: HAASLPRRRSPT*GAGEASKLRAA
Trigger: GGCCGCTCGCAGCTTGCTGGCCTCTCCCGCGCCTCACGTCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 72 bp TCCTCCTGGATGTCCTCAGCTTCCATGCTGCTTCCCTaGCGCGGAGACGGAGTCCGACGTGAGGCGCGGGAG +
Preference number: 6 (lower is better)
Translates to: SSWMSSASMLLP*RGDGVRREARE
Trigger: CTCCCGCGCCTCACGTCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACATCCAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS CCA 72 bp CCCGGTAGCTCTCGAAGGCCTCGTCGATGGGTGCCATaGCGTGAGTCTGGTGCTCCTGGGACTCCCTGCACA +
Preference number: 6 (lower is better)
Translates to: PGSSRRPRRWVP*RESGAPGTPCT
Trigger: TGTGCAGGGAGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000447480.5
CDS GCA 72 bp ACCTGTCCGGTAGCTCTCGAAGGCCTCGTCGATGGGTaGCATGGCGTGAGTCTGGTGCTCCTGGGACTCCCT +
Preference number: 6 (lower is better)
Translates to: TCPVALEGLVDG*HGVSLVLLGLP
Trigger: AGGGAGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGACAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS CCA 72 bp TCCGGTAGCTCTCGAAGGCCTCGTCGATGGGTGCCATaGCGTGAGTCTGGTGCTCCTGGGACTCCCTGCACA +
Preference number: 6 (lower is better)
Translates to: SGSSRRPRRWVP*RESGAPGTPCT
Trigger: TGTGCAGGGAGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS GCA 72 bp AGGTCAACTCCTCCTGGATGTCCTCAGCTTCCATGCTaGTTCCCTGCCGCGGAGACGGAGTCCGACGTGAGG +
Preference number: 6 (lower is better)
Translates to: RSTPPGCPQLPC*FPAAETESDVR
Trigger: CCTCACGTCGGACTCCGTCTCCGCGGCAGGGAAGCAGCATGGAAGCTGAGGACATCCAGGAGGAGTTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
CDS GCA 72 bp TTTCTCCCGGTAGCTCTCGAAGGCCTCGTCGATGGGTaGCATGGCGTGAGTCTGGTGCTCCTGGGACTCCCT +
Preference number: 6 (lower is better)
Translates to: FLPVALEGLVDG*HGVSLVLLGLP
Trigger: AGGGAGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGGAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000447480.5
CDS CCA 72 bp GAAGTTTCTCCCGGTAGCTCTCGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCTGGTGCTCCTGGGACT +
Preference number: 6 (lower is better)
Translates to: EVSPGSSRRPRR*VPWRESGAPGT
Trigger: AGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGGAGAAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000447480.5
CDS CCA 72 bp AGTTACCTGTCCGGTAGCTCTCGAAGGCCTCGTCGATaGGTGCCATGGCGTGAGTCTGGTGCTCCTGGGACT +
Preference number: 6 (lower is better)
Translates to: SYLSGSSRRPRR*VPWRESGAPGT
Trigger: AGTCCCAGGAGCACCAGACTCACGCCATGGCACCCATCGACGAGGCCTTCGAGAGCTACCGGACAGGTAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS TCA 72 bp GAAGATGAGATCACCCCCACTCGTAACTGTCTCACCTaGAGCAGCTCCAGGGTGGGAGCCTGGCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: EDEITPTRNCLT*SSSRVGAWLFS
Trigger: GGAGAAGAGCCAGGCTCCCACCCTGGAGCTGCTTCAGGTGAGACAGTTACGAGTGGGGGTGATCTCATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496896.1
CDS CAA 90 bp GGCCCAGGGATGTGTGTCCCTCAGCTGGACTACAGGGAAGGAGTTTaGGTCAGGGGAAGAAAAGCCTCATTTCCTATCAGTCACTGGTGG +
Preference number: 6 (lower is better)
Translates to: GPGMCVPQLDYREGV*VRGRKASFPISHWW
Trigger: CCACCAGTGACTGATAGGAAATGAGGCTTTTCTTCCCCTGACCAAAACTCCTTCCCTGTAGTCCAGCTGAGGGACACACATCCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349062.7
ENST00000355947.6
CDS TCA 72 bp AAGAGCCCCTCAAGGATGAAGTCTGCCAGAGAGGTCTaGTTCTTCTGCCACATTGTCCCCTTTCTCAATCCC +
Preference number: 6 (lower is better)
Translates to: KSPSRMKSAREV*FFCHIVPFLNP
Trigger: GGGATTGAGAAAGGGGACAATGTGGCAGAAGAATCAGACCTCTCTGGCAGACTTCATCCTTGAGGGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447480.5
CDS TCA 72 bp GTGTGGCGTTCTTCACTTCTACATCCTGTAAATGCATaGCTTTCTTCATCTTGGCCACGAGATTACGCTGAG +
Preference number: 6 (lower is better)
Translates to: VWRSSLLHPVNA*LSSSWPRDYAE
Trigger: CTCAGCGTAATCTCGTGGCCAAGATGAAGAAAGTCATGCATTTACAGGATGTAGAAGTGAAGAACGCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
ENST00000447480.5
CDS TCA 72 bp TGCAGCTTTGAAAACTCCGTGCTGATTCTCATTCGCTaGCTCTTTATCTTATCCTTCCACTGTGTGGCGTTC +
Preference number: 6 (lower is better)
Translates to: CSFENSVLILIR*LFILSFHCVAF
Trigger: GAACGCCACACAGTGGAAGGATAAGATAAAGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAAAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
ENST00000447480.5
ENST00000496896.1
CDS TCA 72 bp CAACCAGGAAGTTGTGCAGCTTTGAAAACTCCGTGCTaGTTCTCATTCGCTGACTCTTTATCTTATCCTTCC +
Preference number: 6 (lower is better)
Translates to: QPGSCAALKTPC*FSFADSLSYPS
Trigger: GGAAGGATAAGATAAAGAGTCAGCGAATGAGAATCAGCACGGAGTTTTCAAAGCTGCACAACTTCCTGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
ENST00000447480.5
ENST00000496896.1
CDS TCA 72 bp TGCATGACTTTCTTCATCTTGGCCACGAGATTACGCTaGGACTTAAGAAGTTTCTCCTCCTGCTTAAAATGG +
Preference number: 6 (lower is better)
Translates to: CMTFFILATRLR*DLRSFSSCLKW
Trigger: CCATTTTAAGCAGGAGGAGAAACTTCTTAAGTCTCAGCGTAATCTCGTGGCCAAGATGAAGAAAGTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355947.6
CDS CCA 72 bp TGGAATCGCTTTAGCATTTCCTTCATCAATGGTATCTaGCACACTGTCTTCACCTTTACAGCTTCAAGAGAA +
Preference number: 6 (lower is better)
Translates to: WNRFSISFINGI*HTVFTFTASRE
Trigger: TTCTCTTGAAGCTGTAAAGGTGAAGACAGTGTGCCAGATACCATTGATGAAGGAAATGCTAAAGCGATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349062.7
ENST00000354241.5
ENST00000355947.6
ENST00000447480.5
CDS TCA 72 bp CTTATATGTGCTAAGTCTCAGATCCTAGATGAACTATaGGACTGTGTGAATCAACTTATCTCCTATGAGCTG +
Preference number: 6 (lower is better)
Translates to: LICAKSQILDEL*DCVNQLISYEL
Trigger: CAGCTCATAGGAGATAAGTTGATTCACACAGTCTCATAGTTCATCTAGGATCTGAGACTTAGCACATATAAG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496896.1