RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM32 (Homo sapiens)

Ensembl gene IDs: ENSG00000119401

Ensembl transcript IDs: ENST00000373983.2, ENST00000411410.1, ENST00000450136.2

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGGTCAATCCATTCTGTCACATCTGCAATTCTCAATCCAAGATaGCACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTT +
Preference number: 1 (lower is better)
Translates to: LGSIHSVTSAILNPR*HRSSRREVLLPKGL
Trigger: AAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAATTGCAGATGTGACAGAATGGATTGACCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 90 bp AGTCATCAATACCAACCAACTAGGGTCAATCCATTCTGTCACATCTaGAATTCTCAATCCAAGATGGCACAGATCCTCCAGGCGAGAGGT +
Preference number: 1 (lower is better)
Translates to: SHQYQPTRVNPFCHI*NSQSKMAQILQARG
Trigger: ACCTCTCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAATTGCAGATGTGACAGAATGGATTGACCCTAGTTGGTTGGTATTGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 90 bp TGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGAAGTaGCTAATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCT +
Preference number: 1 (lower is better)
Translates to: WHKGLKWLSLLKPWK*LIANQTSANTIVCP
Trigger: AGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 90 bp AGTAATGAACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: SNEHENVSTSPLCWP*PMLYNSLDTGQKRE
Trigger: CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTTCATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 90 bp CAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTaGAAGTGCCTAATTGCTAATCAAACTTCAGCTAACACCATCGTG +
Preference number: 1 (lower is better)
Translates to: QTWHKGLKWLSLLKP*KCLIANQTSANTIV
Trigger: CACGATGGTGTTAGCTGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 90 bp TGTTTTAGTAATGAACATGAAAATGTGTCCACCTCTCCACTTTGTTaGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: CFSNEHENVSTSPLC*PWPMLYNSLDTGQK
Trigger: CTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTTCATTACTAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR TCA 90 bp TACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGCACTAAATaGATGACTTTCATACTGGTAAAGACGATCAGACTGAGACATAAT +
Preference number: 1 (lower is better)
Translates to: YCFLKGLCIPFGSTK*MTFILVKTIRLRHN
Trigger: ATTATGTCTCAGTCTGATCGTCTTTACCAGTATGAAAGTCATTCATTTAGTGCTACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR TCA 90 bp ATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGTAGTATaGAAAATGATGAGCCCTAGAGACTATCCAAATTTGCTGACTATA +
Preference number: 1 (lower is better)
Translates to: MLYNSLDTGQKREVV*KMMSPRDYPNLLTI
Trigger: TATAGTCAGCAAATTTGGATAGTCTCTAGGGCTCATCATTTTTCATACTACCTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 90 bp TTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATaGTTTGGCATAATTCCAACCCATATATGCTTCTTTAAAAGGCAA +
Preference number: 1 (lower is better)
Translates to: FADYISICLLIPSFL*FGIIPTHICFFKRQ
Trigger: TTGCCTTTTAAAGAAGCATATATGGGTTGGAATTATGCCAAAGCATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTAGCTCTAAATTTAGGTaGGAAGCGGGGAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFSSKFR*EAGRGT
Trigger: TGTCCCCCTCCCCGCTTCCCACCTAAATTTAGAGCT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGTGGAGCAGATCCCACTaGAGCATGCACAGTGAATCC +
Preference number: 2 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQWSRSH*SMHSES
Trigger: GGATTCACTGTGCATGCTTCAGTGGGATCTGCTCCA...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR GCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCCAGGCGAGAGGTACTaGTTCCTAAAGGGCTTGTGT +
Preference number: 2 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQPGERY*FLKGLC
Trigger: ACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCTGAAGCATGCACAGTaGATCCAATCAGAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQLKHAQ*IQSEFK
Trigger: CTTGAACTCTGATTGGATTCACTGTGCATGCTTCAG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCACAAAGGGCTAAAGTaGCTCTCTCTACTAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQHKGLK*LSLLKP
Trigger: AGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGGGCAAATTTCAAACATaGCACAAAGGGCTAAAGTGG +
Preference number: 2 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQGKFQT*HKGLKW
Trigger: CCACTTTAGCCCTTTGTGCCATGTTTGAAATTTGCC...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATGTAGGAAGGAAACAATaGATCAAGGGCATCAAAGCC +
Preference number: 2 (lower is better)
Translates to: SKAVALWLAISPAPRVRYVGRKQ*IKGIKA
Trigger: GGCTTTGATGCCCTTGATCCATTGTTTCCTTCCTAC...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATAAAAGATGGAGCTTCTaGAGTTCTAGAACTACCCAG +
Preference number: 2 (lower is better)
Translates to: SKAVALWLAISPAPRVRYKRWSF*SSRTTQ
Trigger: CTGGGTAGTTCTAGAACTTCAGAAGCTCCATCTTTT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATGGAGCAGATCCCACTaGAGCATGCACAGTGAATCC +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSWSRSH*SMHSES
Trigger: GGATTCACTGTGCATGCTTCAGTGGGATCTGCTCCA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATGTCTTAAATGTCACTaGAAGGTGGAGCAGATCCCA +
Preference number: 2 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTCLKCH*KVEQIP
Trigger: TGGGATCTGCTCCACCTTTCAGTGACATTTAAGACA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAGATCCCACTGAAGCATaGACAGTGAATCCAATCAGA +
Preference number: 2 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTDPTEA*TVNPIR
Trigger: TCTGATTGGATTCACTGTGCATGCTTCAGTGGGATC...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAATCAGGACATAGGCTaGGTCTATTCTGCATGTGCC +
Preference number: 2 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFNQDIG*VYSACA
Trigger: GGCACATGCAGAATAGACTCAGCCTATGTCCTGATT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATAATAGTGCTTTTGGCTaGATTTTGACCTGGGTAGAT +
Preference number: 2 (lower is better)
Translates to: SKAVALWLAISPAPRVRYNSAFG*ILTWVD
Trigger: ATCTACCCAGGTCAAAATTCAGCCAAAAGCACTATT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR GCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCTAAAGCCTTGGAAGTaGCTAATTGCTAATCAAACT +
Preference number: 2 (lower is better)
Translates to: CWPWPMLYNSLDTGQKRELKPWK*LIANQT
Trigger: AGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAAATCAGGACATAGGCTaGGTCTATTCTGCATGTGCC +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSNQDIG*VYSACA
Trigger: GGCACATGCAGAATAGACTCAGCCTATGTCCTGATT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGATCCCACTGAAGCATaGACAGTGAATCCAATCAGA +
Preference number: 2 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKDPTEA*TVNPIR
Trigger: TCTGATTGGATTCACTGTGCATGCTTCAGTGGGATC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGAAGGGAAGTTGGCTTaGGAGCAGAAGAAACTGATA +
Preference number: 2 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKEGKLA*EQKKLI
Trigger: TATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATTCTCTACTAAAGCCTTaGAAGTGCCTAATTGCTAAT +
Preference number: 2 (lower is better)
Translates to: SKAVALWLAISPAPRVRYSLLKP*KCLIAN
Trigger: ATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGA...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAATTCTCAATCCAAGATaGCACAGATCCTCCAGGCGA +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSILNPR*HRSSRR
Trigger: TCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAAT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCC +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSPLCWP*PMLYNS
Trigger: GGAATTGTACAACATAGGCCAGGGCCAACAAAGTGG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAAAAAGATGGAGCTTCTaGAGTTCTAGAACTACCCAG +
Preference number: 2 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKKRWSF*SSRTTQ
Trigger: CTGGGTAGTTCTAGAACTTCAGAAGCTCCATCTTTT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAAAGCAATTTCCAGGCTaGAGTCATCAATACCAACCA +
Preference number: 2 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKKQFPG*SHQYQP
Trigger: TGGTTGGTATTGATGACTTCAGCCTGGAAATTGCTT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGAAGGGAAGTTGGCTTaGGAGCAGAAGAAACTGATA +
Preference number: 2 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSEGKLA*EQKKLI
Trigger: TATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAAGCTCTAAATTTAGGTaGGAAGCGGGGAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPSSKFR*EAGRGT
Trigger: TGTCCCCCTCCCCGCTTCCCACCTAAATTTAGAGCT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATCTCTACTAAAGCCTTaGAAGTGCCTAATTGCTAAT +
Preference number: 2 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTSLLKP*KCLIAN
Trigger: ATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACACAAAGGGCTAAAGTaGCTCTCTCTACTAAAGCCT +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSHKGLK*LSLLKP
Trigger: AGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAGTAGGAAGGAAACAATaGATCAAGGGCATCAAAGCC +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSVGRKQ*IKGIKA
Trigger: GGCTTTGATGCCCTTGATCCATTGTTTCCTTCCTAC...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAATCGTGTGTCCTATTTaGGCAGTGCATCTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKIVCPI*AVHLLK
Trigger: CTTTAAAAGATGCACTGCCCAAATAGGACACACGAT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACAGCTTCCTATGCTTTaGCATAATTCCAACCCATAT +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSQLPML*HNSNPY
Trigger: ATATGGGTTGGAATTATGCCAAAGCATAGGAAGCTG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCC +
Preference number: 2 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPPLCWP*PMLYNS
Trigger: GGAATTGTACAACATAGGCCAGGGCCAACAAAGTGG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAAAGCAATTTCCAGGCTaGAGTCATCAATACCAACCA +
Preference number: 2 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPKQFPG*SHQYQP
Trigger: TGGTTGGTATTGATGACTTCAGCCTGGAAATTGCTT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR GCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAATATCAGCATTTGTTTaGTTATTCCCAGCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSISAFV*LFPASY
Trigger: ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATAT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAAAGAGAGAGGTAGTATaGAAAATGATGAGCCCTAGA +
Preference number: 2 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPKREVV*KMMSPR
Trigger: TCTAGGGCTCATCATTTTTCATACTACCTCTCTCTT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACCAAATAGTATGTACTaGCTTGAGGAAAACACAGAA +
Preference number: 2 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPPNSMY*LEENTE
Trigger: TTCTGTGTTTTCCTCAAGTCAGTACATACTATTTGG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 72 bp ATCCAAGATGGCACAGATCCTCCAGGCGAGAGGTACTaGTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGC +
Preference number: 3 (lower is better)
Translates to: IQDGTDPPGERY*FLKGLCIPFGS
Trigger: GCTACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGTGCCATCTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGGGAAGGGAAGTTGGCTaGGGAGCAGAAGAAACTGAT +
Preference number: 3 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQGREVG*GAEETD
Trigger: ATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTCC...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 72 bp CATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCCTTAGACACAGGCCAG +
Preference number: 3 (lower is better)
Translates to: HENVSTSPLCWP*PMLYNSLDTGQ
Trigger: CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGTCCACCTCTCCACTTaGTTGGCCCTGGCCTATGTT +
Preference number: 3 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKVHLST*LALAYV
Trigger: AACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGAC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGGAAGGGAAGTTGGCTaGGGAGCAGAAGAAACTGAT +
Preference number: 3 (lower is better)
Translates to: QISNMAQRAKVALSTKALGREVG*GAEETD
Trigger: ATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTCC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCGTCCACCTCTCCACTTaGTTGGCCCTGGCCTATGTT +
Preference number: 3 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVVHLST*LALAYV
Trigger: AACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGAC...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATGCTTCCTAAAGGGCTaGTGTATCCCCTTTGGTAGC +
Preference number: 3 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSCFLKG*CIPFGS
Trigger: GCTACCAAAGGGGATACACAAGCCCTTTAGGAAGCA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 72 bp GGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGAAGTaGCTAATTGCTAATCAAACTTCAGCTAACACCATC +
Preference number: 3 (lower is better)
Translates to: GLKWLSLLKPWK*LIANQTSANTI
Trigger: GATGGTGTTAGCTGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTTTAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACAGTTGCTCTTTGGCTaGCCATCAGCCCTGCACCTA +
Preference number: 3 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPQLLFG*PSALHL
Trigger: TAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 72 bp CACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTaGAAGTGCCTAATTGCTAATCAAACTTCAGCTAAC +
Preference number: 3 (lower is better)
Translates to: HKGLKWLSLLKP*KCLIANQTSAN
Trigger: GTTAGCTGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CCA 72 bp AATGAACATGAAAATGTGTCCACCTCTCCACTTTGTTaGCCCTGGCCTATGTTGTACAATTCCTTAGACACA +
Preference number: 3 (lower is better)
Translates to: NEHENVSTSPLC*PWPMLYNSLDT
Trigger: TGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACATCGTGTGTCCTATTaGGGCAGTGCATCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKHRVSY*GSASFK
Trigger: TTTAAAAGATGCACTGCCCAAATAGGACACACGATG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCATCGTGTGTCCTATTaGGGCAGTGCATCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: IMLREYDVLNVTERWSRSHRVSY*GSASFK
Trigger: TTTAAAAGATGCACTGCCCAAATAGGACACACGATG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR TCA 72 bp AATTCCTTAGACACAGGCCAGAAGAGAGAGGTAGTATaGAAAATGATGAGCCCTAGAGACTATCCAAATTTG +
Preference number: 3 (lower is better)
Translates to: NSLDTGQKREVV*KMMSPRDYPNL
Trigger: CAAATTTGGATAGTCTCTAGGGCTCATCATTTTTCATACTACCTCTCTCTTCTGGCCTGTGTCTAAGGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATATATCAGCATTTGTTaGCTTATTCCCAGCTTCCTA +
Preference number: 3 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSYISIC*LIPSFL
Trigger: TAGGAAGCTGGGAATAAGCAAACAAATGCTGATATA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAATCAAAGTAAGGCAGTaGCTCTTTGGCTTGCCATCA +
Preference number: 3 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPIKVRQ*LFGLPS
Trigger: TGATGGCAAGCCAAAGAGCAACTGCCTTACTTTGAT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR GCA 72 bp TATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATaGTTTGGCATAATTCCAACCCATATATGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: YISICLLIPSFL*FGIIPTHICFF
Trigger: AAAGAAGCATATATGGGTTGGAATTATGCCAAAGCATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCTCAGCTGGCTCCTGTaGCAGGCCACGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKRELSWLL*QATQWP
Trigger: TGGCCACTGCGTGGCCTGTCACAGGAGCCAGCTGAG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTAGGAGGCTGATGGTCTaGCTCCCGGCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFRRLMV*LPAGLT
Trigger: TGTGAGCCCTGCCGGGAGGCAGACCATCAGCCTCCT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGACACCTTCCAAGGCTaGCTTCCGCCGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFDTFQG*LPPLQL
Trigger: GAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCCGCTGTTTAGCAGGTaGGGCCCTAGGGCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREPLFSR*GPRAGN
Trigger: GTTGCCAGCCCTAGGGCCTCACCTGCTAAACAGCGG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCGAGCCAGCTCATCCTaGACCCTGCGCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKRERASSS*TLRSSC
Trigger: GCATGAGGAGCGCAGGGTCCAGGATGAGCTGGCTCG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTAGGCAGCAGACGCTGTaGCCTCCATGGCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFRQQTL*PPWPRN
Trigger: ATTCCTGGGCCATGGAGGCCACAGCGTCTGCTGCCT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATAGGAGGCTGATGGTCTaGCTCCCGGCAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYRRLMV*LPAGLT
Trigger: TGTGAGCCCTGCCGGGAGGCAGACCATCAGCCTCCT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTACGCCGCTCCTCAGCTaGTTCTTTGACAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGTPLLS*FFDREC
Trigger: ACACTCCCTGTCAAAGAAGCAGCTGAGGAGCGGCGT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATGCTGCCTTCCGCCGCTaGAGCTCCCCCATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYAAFRR*SSPISS
Trigger: GGAACTTATGGGGGAGCTGCAGCGGCGGAAGGCAGC...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTACCCTGCGCTCCTCATaGCCATACTCCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGTLRSS*PYSWRT
Trigger: AGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTACGCTGTGGCCTCCATaGCCCAGGAATCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFTLWPP*PRNLPR
Trigger: ACGTGGAAGATTCCTGGGCCATGGAGGCCACAGCGT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAGGCAGCAGACGCTGTaGCCTCCATGGCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQRQQTL*PPWPRN
Trigger: ATTCCTGGGCCATGGAGGCCACAGCGTCTGCTGCCT...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGCAGTGGCCAGGAGGCTaGTGGTCTGCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALQWPGG*WSASRQ
Trigger: CTGCCGGGAGGCAGACCATCAGCCTCCTGGCCACTG...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGCAGTTCATTGCCACTaGGAGAGGAGTGAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFAVHCH*ERSEVG
Trigger: CCCAACCTCACTCCTCTCTCAGTGGCAATGAACTGC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTCAGATGGCAAGGCTGTaGTACCCCATGGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGQMARL*YPMVCS
Trigger: TGAGCAAACCATGGGGTATCACAGCCTTGCCATCTG...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACAGCTCCGGCAGAATTaGCGGGGCAGACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKQLRQN*RGRRRP
Trigger: TGGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGCACAAAGCTATCAATaGCACTGGGGCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREAQSYQ*HWGCGG
Trigger: TCCGCCGCAGCCCCAGTGGCATTGATAGCTTTGTGC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCCACCCTCCAGGTGGTaGTCATTCTGCCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQPPSRW*SFCRFS
Trigger: GGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGGACTCCATGCAGATaGGGCATTCTAGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGRTPCR*GILALP
Trigger: GGGAAGTGCTAGAATGCCCCATCTGCATGGAGTCCT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTAAGCCACCCTCCAGGTaGTGCTCATTCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFKPPSR*CSFCRF
Trigger: GAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCCTCAGCATCACAGGTaGCAAATTTGGGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREPQHHR*QIWAAQ
Trigger: CTGTGCGGCCCAAATTTGTCACCTGTGATGCTGAGG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGTGCTACATCTGCCTaGTTGATCTTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGSATSA*LILARK
Trigger: CTTCCTGGCCAAGATCAAGCAGGCAGATGTAGCACT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATCTGGCGACCCAGCTaGCCATCAGGGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTIWRPS*PSGPTE
Trigger: CTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGAT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCACAGTGCAGAAGCTTaGGACGCAGCTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREHSAEA*DAAALL
Trigger: CAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGAAAGAGGCACTGCTaGATATTGGAGGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGRKRHC*ILEAAS
Trigger: TGAGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAAGATTGAACATTCCTaGAGTGCTGCCTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGKIEHS*SAAFGP
Trigger: GGGGCCAAAGGCAGCACTCCAGGAATGTTCAATCTT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATGCAGCTGCTCTTCTGTaGAGGACTCCATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYAAALL*RTPCRW
Trigger: CCATCTGCATGGAGTCCTTCACAGAAGAGCAGCTGC...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGACAGCGGACACCATTaGTGCTACTGGCCAATAGCT +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREDSGHH*CYWPIA
Trigger: AGCTATTGGCCAGTAGCATCAATGGTGTCCGCTGTC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCAGTGGCCAGGAGGCTaGTGGTCTGCCTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSQWPGG*WSASRQ
Trigger: CTGCCGGGAGGCAGACCATCAGCCTCCTGGCCACTG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGCTTTATACCTTGCCTaGAGGTCCTTGGAGACACCT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFALYLA*RSLETP
Trigger: AGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACCACATCTTGCAGGGTaGGCTCCCGAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKPHLAG*APEASW
Trigger: CCAGCTTGCCTCGGGAGCTCACCCTGCAAGATGTGG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATGGAGGGGGCCAACATaGCCTACCTTAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTWRGPT*PTLRSS
Trigger: GGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGGCCTAAGCCCTGGGTaGAGTAGACGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALGLSPG*SRRCPQ
Trigger: CTGAGGGCACCGTCTACTTCACCCAGGGCTTAGGCC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGTACTGTCAGCCACGATaGGATCACCACGAGCATCCA +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQYCQPR*DHHEHP
Trigger: TGGATGCTCGTGGTGATCTCATCGTGGCTGACAGTA...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAATCAGGACATAGGCTaGGTCTATTCTGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGNQDIG*VYSACA
Trigger: GGCACATGCAGAATAGACTCAGCCTATGTCCTGATT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGAGCATCCACACACATaGCAGCAATGCAGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFEHPHT*QQCSGN
Trigger: ATTTCCGCTGCATTGCTGGCATGTGTGTGGATGCTC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGCGAGCCAGCTCATCCTaGACCCTGCGCTCCTCATGC +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALRASSS*TLRSSC
Trigger: GCATGAGGAGCGCAGGGTCCAGGATGAGCTGGCTCG...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAACGCTGTGGCCTCCATaGCCCAGGAATCTTCCACGT +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTTLWPP*PRNLPR
Trigger: ACGTGGAAGATTCCTGGGCCATGGAGGCCACAGCGT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGTTCTCCGAGAAGAAGTaGCTAATCTGGCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREFSEKK*LIWRPS
Trigger: GCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAA...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CAA 72 bp GTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTaGTACAATTCCTTAGACACAGGCCAGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSTSPLCWPWPM*YNSLDTGQKRE
Trigger: CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCCATTGCTCTTCCTTTaGAGGGTATTGCTAGCACAG +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFPLLFL*RVLLAQ
Trigger: CTGTGCTAGCAATACCCTTCAAAGGAAGAGCAATGG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACACAGCCAAAGAGCCTGTaGAGAACTTCCGAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTQPKSL*RTSESE
Trigger: CTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTG...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCTACATCTGCCTGCTTaGTCTTGGCCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQLHLPA*SWPGSS
Trigger: ACTACTTCCTGGCCAAGATCAAGCAGGCAGATGTAG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATGGCCCCCATCTTCTTaGGAAAGAGGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTWPPSS*ERGTAG
Trigger: TCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCAGCTGGCTCCTGTaGCAGGCCACGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVLSWLL*QATQWP
Trigger: TGGCCACTGCGTGGCCTGTCACAGGAGCCAGCTGAG...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGATAGGCAGCTGTATTTaGCCACCCCTGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQIGSCI*PPLILD
Trigger: ATCGAGGATCAGGGGTGGTCAAATACAGCTGCCTAT...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGGCCTAAGCCCTGGGTaGAGTAGACGGTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSGLSPG*SRRCPQ
Trigger: CTGAGGGCACCGTCTACTTCACCCAGGGCTTAGGCC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTCTGAAGCATGCACAGTaGATCCAATCAGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGLKHAQ*IQSEFK
Trigger: CTTGAACTCTGATTGGATTCACTGTGCATGCTTCAG...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGCTGCCTTCCGCCGCTaGAGCTCCCCCATAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSAAFRR*SSPISS
Trigger: GGAACTTATGGGGGAGCTGCAGCGGCGGAAGGCAGC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAGTGCTACATCTGCCTaGTTGATCTTGGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQSATSA*LILARK
Trigger: CTTCCTGGCCAAGATCAAGCAGGCAGATGTAGCACT...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAGGAGCTCCACATCTTaGAGGGTGAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFRSSTS*RVSSRG
Trigger: GCCTCGGGAGCTCACCCTGCAAGATGTGGAGCTCCT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGTTGAGAAAGAGGCACTaGTGGATATTGGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQLRKRH*WILEAA
Trigger: GGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAA...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATCCAAGACCAGCAGCTaGCCCTTAGGAGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTSKTSS*PLGVRA
Trigger: AGCCCTAACTCCTAAGGGGCAGCTGCTGGTCTTGGA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATCCAGGCGAGAGGTACTaGTTCCTAAAGGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYPGERY*FLKGLC
Trigger: ACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGG...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAAGCTATCAATGCCACTaGGGCTGCGGCGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTSYQCH*GCGGFP
Trigger: AGGAAATCCGCCGCAGCCCCAGTGGCATTGATAGCT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTGTAGGAAGGAAACAATaGATCAAGGGCATCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGVGRKQ*IKGIKA
Trigger: GGCTTTGATGCCCTTGATCCATTGTTTCCTTCCTAC...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTATTCTCAATCCAAGATaGCACAGATCCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFILNPR*HRSSRR
Trigger: TCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAAT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGTGGAGGGGGCCAACATaGCCTACCTTAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALWRGPT*PTLRSS
Trigger: GGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCA...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAGCTGTAGATCTTaGTGCAATGATCCCAACAGT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFGSCRS*CNDPNS
Trigger: ACTGTTGGGATCATTGCATCAAGATCTACAGCTACC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGGTAAAAGATGGAGCTTCTaGAGTTCTAGAACTACCCAG +
Preference number: 4 (lower is better)
Translates to: DPPGERYCFLKGLCIPFGKRWSF*SSRTTQ
Trigger: CTGGGTAGTTCTAGAACTTCAGAAGCTCCATCTTTT...ACCAAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACATGGAGCAGATCCCACTaGAGCATGCACAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTWSRSH*SMHSES
Trigger: GGATTCACTGTGCATGCTTCAGTGGGATCTGCTCCA...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATCAGCTCCGGCAGAATTaGCGGGGCAGACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYQLRQN*RGRRRP
Trigger: TGGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTG...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAACATTCCTGGAGTGCTaGCTTTGGCCCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTTFLEC*LWPPSS
Trigger: AGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATAGGTGGTGCTCATTCTaGCGATTCTCCAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYRWCSF*RFSRLR
Trigger: CCTCAATCTGGAGAATCGGCAGAATGAGCACCACCT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCCACCCTCCAGGTGGTaGTCATTCTGCCGATTCTCC +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHPPSRW*SFCRFS
Trigger: GGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGG...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCACACATGCCAGCAATaGAGCGGAAATCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREHTCQQ*SGNPHS
Trigger: AGAATGAGGATTTCCGCTGCATTGCTGGCATGTGTG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTGGCACTGGCGGCAGATaGTATGGCCACAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFGTGGR*YGHSAE
Trigger: TTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCC...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATAGCTTCTCCAGGCACTaGCGGCAGATGGTATGGCCA +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHSFSRH*RQMVWP
Trigger: TGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATTACAAACTGGCCAGATaGCAAGGCTGTGATACCCCA +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYYKLAR*QGCDTP
Trigger: TGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTA...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAAAGAAGTGGCTAATCTaGCGACCCAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTKKWLI*RPSCPS
Trigger: TGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGCAGCTGCTCTTCTGTaGAGGACTCCATGCAGATGG +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKAAALL*RTPCRW
Trigger: CCATCTGCATGGAGTCCTTCACAGAAGAGCAGCTGC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGTGTCTTAAATGTCACTaGAAGGTGGAGCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQCLKCH*KVEQIP
Trigger: TGGGATCTGCTCCACCTTTCAGTGACATTTAAGACA...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAATGGTATGGCCACAGTaGAGAAGCTTGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKMVWPQ*RSLGRS
Trigger: GCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCAT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAACGCCGCTCCTCAGCTaGTTCTTTGACAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKTPLLS*FFDREC
Trigger: ACACTCCCTGTCAAAGAAGCAGCTGAGGAGCGGCGT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAGGAGCTCCACATCTTaGAGGGTGAGCTCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVRSSTS*RVSSRG
Trigger: GCCTCGGGAGCTCACCCTGCAAGATGTGGAGCTCCT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCTGGATATTGGAGGCTaGCTCAGGACCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFLDIGG*LRTPLF
Trigger: AAACAGCGGGGTCCTGAGGCAGCCTCCAATATCCAG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGCACAAAGCTATCAATaGCACTGGGGCTGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSAQSYQ*HWGCGG
Trigger: TCCGCCGCAGCCCCAGTGGCATTGATAGCTTTGTGC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAAGGTGGTGCTCATTCTaGCGATTCTCCAGATTGAGG +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTRWCSF*RFSRLR
Trigger: CCTCAATCTGGAGAATCGGCAGAATGAGCACCACCT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCATCTGGCGACCCAGCTaGCCATCAGGGCCTACAGAG +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSIWRPS*PSGPTE
Trigger: CTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGAT...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTATTCCCAGCTTCCTATaGTTTGGCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFIPSFL*FGIIPT
Trigger: GGTTGGAATTATGCCAAAGCATAGGAAGCTGGGAAT...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCACAGTGCAGAAGCTTaGGACGCAGCTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHHSAEA*DAAALL
Trigger: CAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTG...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGGCACTGGCGGCAGATaGTATGGCCACAGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSGTGGR*YGHSAE
Trigger: TTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCGGCACTGCTGGATATTaGAGGCTGCCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSGTAGY*RLPQDP
Trigger: GGGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCC...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGGCTGTGATACCCCATaGTTTGCTCAGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALGCDTP*FAQLAP
Trigger: AGGAGCCAGCTGAGCAAACCATGGGGTATCACAGCC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATGGCCTACAGAGCCAATaGAAAAGCCACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHGLQSQ*KSHPPG
Trigger: ACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCC...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGAAGGGAAGTTGGCTTaGGAGCAGAAGAAACTGATA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREEGKLA*EQKKLI
Trigger: TATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGGTAGGAAGGAAACAATaGATCAAGGGCATCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQVGRKQ*IKGIKA
Trigger: GGCTTTGATGCCCTTGATCCATTGTTTCCTTCCTAC...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGGTGACTCTAAACCTTaGGGGATGATTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREGDSKP*GMILYT
Trigger: TGTGTACAGAATCATCCCCCAAGGTTTAGAGTCACC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGACAGCGGACACCATTaGTGCTACTGGCCAATAGCT +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALDSGHH*CYWPIA
Trigger: AGCTATTGGCCAGTAGCATCAATGGTGTCCGCTGTC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATCCACATCTTGCAGGGTaGGCTCCCGAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYPHLAG*APEASW
Trigger: CCAGCTTGCCTCGGGAGCTCACCCTGCAAGATGTGG...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACAGATGGCAAGGCTGTaGTACCCCATGGTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKQMARL*YPMVCS
Trigger: TGAGCAAACCATGGGGTATCACAGCCTTGCCATCTG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGAAGCAATTTCCAGGCTaGAGTCATCAATACCAACCA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREKQFPG*SHQYQP
Trigger: TGGTTGGTATTGATGACTTCAGCCTGGAAATTGCTT...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATACAGCACAGTATTCATaGCCTAGAGGGTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYTAQYS*PRGSNS
Trigger: GGAATTTGACCCTCTAGGGCATGAATACTGTGCTGT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAAGCTTGGGACGCAGCTaGTCTTCTGTGAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSSLGRS*SSVKDS
Trigger: GGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAATGGTATGGCCACAGTaGAGAAGCTTGGGACGCAGC +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSMVWPQ*RSLGRS
Trigger: GCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCAT...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATGACACCTTCCAAGGCTaGCTTCCGCCGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYDTFQG*LPPLQL
Trigger: GAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTC...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCGCTCATCCTGGACCCTaGGCTCCTCATGCCCATACT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVAHPGP*APHAHT
Trigger: AGTATGGGCATGAGGAGCGCAGGGTCCAGGATGAGC...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACAGCGAGACACAGCCTaGACCTCTGCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKQRDTA*TSAMLS
Trigger: GCTTAACATTGCAGAGGTGCAGGCTGTGTCTCGCTG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGCAGCGAGACACAGCCTaGACCTCTGCAATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALQRDTA*TSAMLS
Trigger: GCTTAACATTGCAGAGGTGCAGGCTGTGTCTCGCTG...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCACTGGATATTGGAGGCTaGCTCAGGACCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSLDIGG*LRTPLF
Trigger: AAACAGCGGGGTCCTGAGGCAGCCTCCAATATCCAG...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTACATTCCTGGAGTGCTaGCTTTGGCCCCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFTFLEC*LWPPSS
Trigger: AGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAAGGACTCCATGCAGATaGGGCATTCTAGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKRTPCR*GILALP
Trigger: GGGAAGTGCTAGAATGCCCCATCTGCATGGAGTCCT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTTTGCCTGAAGGTCCTTaGAGACACCTTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFLPEGP*RHLPRL
Trigger: CAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAA...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGCTACCACTTGACTATTaGACTTCTCAACTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CWPWPMLYNSLDTGQKRELPLDY*TSQLQP
Trigger: TGGCTGAAGTTGAGAAGTCCAATAGTCAAGTGGTAG...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCGCTGGCAGTGAGCTCTaGCTCCTCCTCATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVAGSEL*LLLISC
Trigger: ACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCAGC...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGGCTGTGATACCCCATaGTTTGCTCAGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSGCDTP*FAQLAP
Trigger: AGGAGCCAGCTGAGCAAACCATGGGGTATCACAGCC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGGCCTACAGAGCCAATaGAAAAGCCACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSGLQSQ*KSHPPG
Trigger: ACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGATTTCTCATCCCCTATaGGGTGGAATATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQISHPL*GGISSQ
Trigger: CTGAGAAGATATTCCACCCCATAGGGGATGAGAAAT...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAGCTCTAAATTTAGGTaGGAAGCGGGGAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFSSKFR*EAGRGT
Trigger: TGTCCCCCTCCCCGCTTCCCACCTAAATTTAGAGCT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACACCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCC +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTPLCWP*PMLYNS
Trigger: GGAATTGTACAACATAGGCCAGGGCCAACAAAGTGG...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAAGGCAGTTGCTCTTTaGCTTGCCATCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFKAVAL*LAISPA
Trigger: TGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAGCATCCAGGTTCAGGTaGGAAGCTGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPASRFR*EAAAAA
Trigger: GGCTGCAGCAGCAGCTTCTCACCTGAACCTGGATGC...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAGCCCAGCTGTATCAATaGTCTTTAGCACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTAQLYQ*SLALSD
Trigger: ATCTGACAGTGCTAAAGATCATTGATACAGCTGGGC...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATGCTTTATACCTTGCCTaGAGGTCCTTGGAGACACCT +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHALYLA*RSLETP
Trigger: AGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGC...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCTGGCCCCCATCTTCTTaGGAAAGAGGCACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSWPPSS*ERGTAG
Trigger: TCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCA...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATACTGTCAGCCACGATaGGATCACCACGAGCATCCA +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSYCQPR*DHHEHP
Trigger: TGGATGCTCGTGGTGATCTCATCGTGGCTGACAGTA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCCAAATAGTATGTACTaGCTTGAGGAAAACACAGAA +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFPNSMY*LEENTE
Trigger: TTCTGTGTTTTCCTCAAGTCAGTACATACTATTTGG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCTTTGGCAGCTATTATaGTACAATCCAAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFLWQLL*YNPKKH
Trigger: GTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAGTTCAGGTGAGAAGCTaGTGCTGCAGCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSVQVRS*CCSHCS
Trigger: AGAGCAATGGCTGCAGCAGCAGCTTCTCACCTGAAC...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCAGCTTGGGACGCAGCTaGTCTTCTGTGAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSSLGRS*SSVKDS
Trigger: GGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCT...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTCCAAGACCAGCAGCTaGCCCTTAGGAGTTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVSKTSS*PLGVRA
Trigger: AGCCCTAACTCCTAAGGGGCAGCTGCTGGTCTTGGA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCTAAAGCCTTGGAAGTaGCTAATTGCTAATCAAACT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFLKPWK*LIANQT
Trigger: AGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACCAGGCGAGAGGTACTaGTTCCTAAAGGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSPGERY*FLKGLC
Trigger: ACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTGGCGGCAGATGGTATaGCCACAGTGCAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVWRQMV*PQCRSL
Trigger: CAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATAGATTGTCTGTCAGCTaGGTCAAGCTGGTTATGCGG +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHRLSVS*VKLVMR
Trigger: CCGCATAACCAGCTTGACCCAGCTGACAGACAATCT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAAAGATTGAACATTCCTaGAGTGCTGCCTTTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKKIEHS*SAAFGP
Trigger: GGGGCCAAAGGCAGCACTCCAGGAATGTTCAATCTT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATTCGGTTACTACAAACTaGCCAGATGGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHSVTTN*PDGKAV
Trigger: CACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGA...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAAAGAAGTGGCTAATCTaGCGACCCAGCTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSKKWLI*RPSCPS
Trigger: TGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATTCTCCGAGAAGAAGTaGCTAATCTGGCGACCCAGC +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSFSEKK*LIWRPS
Trigger: GCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTTCTCTACTAAAGCCTTaGAAGTGCCTAATTGCTAAT +
Preference number: 4 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFSLLKP*KCLIAN
Trigger: ATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGA...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATACCTCTCCACTTTGTTaGCCCTGGCCTATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHTSPLC*PWPMLY
Trigger: GTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAGCACAGCTCAGAACTaGACAGCACAGTATTCATGC +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFSTAQN*TAQYSC
Trigger: GCATGAATACTGTGCTGTTCAGTTCTGAGCTGTGCT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACTACATCTGCCTGCTTaGTCTTGGCCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSLHLPA*SWPGSS
Trigger: ACTACTTCCTGGCCAAGATCAAGCAGGCAGATGTAG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGTATTTGACCACCCCTaGTCCTCGATCAACTGTGAA +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKVFDHP*SSINCE
Trigger: TTCACAGTTGATCGAGGATCAGGGGTGGTCAAATAC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCATGAACACCAGAGATaGAGAAACAGTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQHEHQR*RNSSQL
Trigger: TAATTGAGAACTGTTTCTTCATCTCTGGTGTTCATG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATCTAAACCTTGGGGGATaGTTCTGTACACATGTATTT +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYLNLGG*FCTHVF
Trigger: AAATACATGTGTACAGAATCATCCCCCAAGGTTTAG...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACACAGCCTGCACCTCTaGAATGTTAAGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKHSLHL*NVKQVT
Trigger: AGTTACCTGCTTAACATTGCAGAGGTGCAGGCTGTG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCCAGCTTCCTATaGTTTGGCATAATTCCAACC +
Preference number: 4 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTIPSFL*FGIIPT
Trigger: GGTTGGAATTATGCCAAAGCATAGGAAGCTGGGAAT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATAGCTTCTCCAGGCACTaGCGGCAGATGGTATGGCCA +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYSFSRH*RQMVWP
Trigger: TGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAAGATTGTCTGTCAGCTaGGTCAAGCTGGTTATGCGG +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSRLSVS*VKLVMR
Trigger: CCGCATAACCAGCTTGACCCAGCTGACAGACAATCT...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAGCTGGCAGTGAGCTCTaGCTCCTCCTCATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPAGSEL*LLLISC
Trigger: ACAGCTGATGAGGAGGAGCCAGAGCTCACTGCCAGC...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAAGAAAGAGGCACTGCTaGATATTGGAGGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSRKRHC*ILEAAS
Trigger: TGAGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAGCTCTAAATTTAGGTaGGAAGCGGGGAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVSSKFR*EAGRGT
Trigger: TGTCCCCCTCCCCGCTTCCCACCTAAATTTAGAGCT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATATCGTGTGTCCTATTTaGGCAGTGCATCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYIVCPI*AVHLLK
Trigger: CTTTAAAAGATGCACTGCCCAAATAGGACACACGAT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATATTCTCAATCCAAGATaGCACAGATCCTCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHILNPR*HRSSRR
Trigger: TCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAAT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATCAGCTTCCTATGCTTTaGCATAATTCCAACCCATAT +
Preference number: 4 (lower is better)
Translates to: SKAVALWLAISPAPRVRYQLPML*HNSNPY
Trigger: ATATGGGTTGGAATTATGCCAAAGCATAGGAAGCTG...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACCACTTTGTTGGCCCTaGCCTATGTTGTACAATTCC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKPLCWP*PMLYNS
Trigger: GGAATTGTACAACATAGGCCAGGGCCAACAAAGTGG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAAGGCAGTTGCTCTTTaGCTTGCCATCAGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVKAVAL*LAISPA
Trigger: TGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACCATTGCTCTTCCTTTaGAGGGTATTGCTAGCACAG +
Preference number: 4 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSPLLFL*RVLLAQ
Trigger: CTGTGCTAGCAATACCCTTCAAAGGAAGAGCAATGG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGCCCAGCTGTATCAATaGTCTTTAGCACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALAQLYQ*SLALSD
Trigger: ATCTGACAGTGCTAAAGATCATTGATACAGCTGGGC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATCAGCCAAAGAGCCTGTaGAGAACTTCCGAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYQPKSL*RTSESE
Trigger: CTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTG...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATGCTCCTCTACCACTTaGCTATTGGACTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKCSSTT*LLDFST
Trigger: AGTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTGGTAGCTGTAGATCTTaGTGCAATGATCCCAACAGT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFGSCRS*CNDPNS
Trigger: ACTGTTGGGATCATTGCATCAAGATCTACAGCTACC...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATTGTCTTAAATGTCACTaGAAGGTGGAGCAGATCCCA +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHCLKCH*KVEQIP
Trigger: TGGGATCTGCTCCACCTTTCAGTGACATTTAAGACA...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGACAGCACAGTATTCATaGCCTAGAGGGTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALTAQYS*PRGSNS
Trigger: GGAATTTGACCCTCTAGGGCATGAATACTGTGCTGT...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAAACTGCTTTATACCTTaGCTGAAGGTCCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKNCFIP*LKVLGD
Trigger: GTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAACCCTGCGCTCCTCATaGCCATACTCCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPTLRSS*PYSWRT
Trigger: AGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCACACACATGCCAGCAATaGAGCGGAAATCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSHTCQQ*SGNPHS
Trigger: AGAATGAGGATTTCCGCTGCATTGCTGGCATGTGTG...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTAATGGAGAATTTCCTTaGGACTACTGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFNGEFP*DYCQPR
Trigger: TCGTGGCTGACAGTAGTCGCAAGGAAATTCTCCATT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTGATCCCACTGAAGCATaGACAGTGAATCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFDPTEA*TVNPIR
Trigger: TCTGATTGGATTCACTGTGCATGCTTCAGTGGGATC...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCACGTAGAGACTGACTaGAAGATTGAACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFHVETD*KIEHSW
Trigger: CCAGGAATGTTCAATCTTCCAGTCAGTCTCTACGTG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATAGCTATCAATGCCACTaGGGCTGCGGCGGATTTCCT +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYSYQCH*GCGGFP
Trigger: AGGAAATCCGCCGCAGCCCCAGTGGCATTGATAGCT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTCGGTTACTACAAACTaGCCAGATGGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVSVTTN*PDGKAV
Trigger: CACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATAAGCCACCCTCCAGGTaGTGCTCATTCTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYKPPSR*CSFCRF
Trigger: GAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATCATCCCCTATGGGGTaGAATATCTTCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKSSPMG*NIFSDG
Trigger: ACCATCTGAGAAGATATTCCACCCCATAGGGGATGA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCACAAAGGGCTAAAGTaGCTCTCTCTACTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFHKGLK*LSLLKP
Trigger: AGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCACCTCTCCACTTTGTTaGCCCTGGCCTATGTTGTAC +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSTSPLC*PWPMLY
Trigger: GTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGT...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATGATAAGGAAGCAAAATaGCATAGCGCAGGTTATCCC +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHDKEAK*HSAGYP
Trigger: GGGATAACCTGCGCTATGCCATTTTGCTTCCTTATC...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGGGTGACTCTAAACCTTaGGGGATGATTCTGTACACA +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALGDSKP*GMILYT
Trigger: TGTGTACAGAATCATCCCCCAAGGTTTAGAGTCACC...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
3UTR CAA 72 bp AGTTTAGCAAATTTTGTTTACATCAAAGTAAGGCAGTaGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAG +
Preference number: 4 (lower is better)
Translates to: SLANFVYIKVRQ*LFGLPSALHLE
Trigger: CTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACTTTGATGTAAACAAAATTTGCTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAACCAAGGTATATACCTTaGGGGAGTTATCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKPRYIP*GSYHSC
Trigger: ACAGCTATGATAACTCCCTCAAGGTATATACCTTGG...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAATCAGGACATAGGCTaGGTCTATTCTGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVNQDIG*VYSACA
Trigger: GGCACATGCAGAATAGACTCAGCCTATGTCCTGATT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATATACTCCTGGAGAACTaGTTTATACCTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: IANQTSANTIVCPIWAVHILLEN*FIPCLK
Trigger: CTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTAT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTATACTCCTGGAGAACTaGTTTATACCTTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFILLEN*FIPCLK
Trigger: CTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTAT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCACAGCCTGCACCTCTaGAATGTTAAGCAGGTAACT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVHSLHL*NVKQVT
Trigger: AGTTACCTGCTTAACATTGCAGAGGTGCAGGCTGTG...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACAATGCCACTGGGGCTaGGGCGGATTTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPQCHWG*GGFPSK
Trigger: TTTTGAAGGAAATCCGCCGCAGCCCCAGTGGCATTG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATCAATGCCACTGGGGCTaGGGCGGATTTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYQCHWG*GGFPSK
Trigger: TTTTGAAGGAAATCCGCCGCAGCCCCAGTGGCATTG...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGATCCCACTGAAGCATaGACAGTGAATCCAATCAGA +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSDPTEA*TVNPIR
Trigger: TCTGATTGGATTCACTGTGCATGCTTCAGTGGGATC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCATTGCCTGAAGGTCCTTaGAGACACCTTCCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPLPEGP*RHLPRL
Trigger: CAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAA...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGTCATGCCCATACTCCTaGAGAACTGCTTTATACCTT +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALSCPYS*RTALYL
Trigger: AAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGA...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAACACCAATCAGCCCCTaGCAGTTCATTGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPTPISP*QFIATE
Trigger: CTCAGTGGCAATGAACTGCCAGGGGCTGATTGGTGT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATACACCAATCAGCCCCTaGCAGTTCATTGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYTPISP*QFIATE
Trigger: CTCAGTGGCAATGAACTGCCAGGGGCTGATTGGTGT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCCACCCTTAGGAAAATaGAGAATTTCCTTGCGACTA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFPPLGK*RISLRL
Trigger: TAGTCGCAAGGAAATTCTCCATTTTCCTAAGGGTGG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAGATAAGGAAGCAAAATaGCATAGCGCAGGTTATCCC +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSDKEAK*HSAGYP
Trigger: GGGATAACCTGCGCTATGCCATTTTGCTTCCTTATC...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTGCTCCTCTACCACTTaGCTATTGGACTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVCSSTT*LLDFST
Trigger: AGTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAATAGGCAGCTGTATTTaGCCACCCCTGATCCTCGAT +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPIGSCI*PPLILD
Trigger: ATCGAGGATCAGGGGTGGTCAAATACAGCTGCCTAT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCAAAAAGATGGAGCTTCTaGAGTTCTAGAACTACCCAG +
Preference number: 4 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSKRWSF*SSRTTQ
Trigger: CTGGGTAGTTCTAGAACTTCAGAAGCTCCATCTTTT...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCTAAACCTTGGGGGATaGTTCTGTACACATGTATTT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFLNLGG*FCTHVF
Trigger: AAATACATGTGTACAGAATCATCCCCCAAGGTTTAG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATGAGCATCCACACACATaGCAGCAATGCAGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYEHPHT*QQCSGN
Trigger: ATTTCCGCTGCATTGCTGGCATGTGTGTGGATGCTC...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAATGGAGAATTTCCTTaGGACTACTGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVNGEFP*DYCQPR
Trigger: TCGTGGCTGACAGTAGTCGCAAGGAAATTCTCCATT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCATACAAACTGGCCAGATaGCAAGGCTGTGATACCCCA +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPYKLAR*QGCDTP
Trigger: TGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTA...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCTCATCCCCTATGGGGTaGAATATCTTCTCAGATGGT +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSSSPMG*NIFSDG
Trigger: ACCATCTGAGAAGATATTCCACCCCATAGGGGATGA...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCGAAGGGAAGTTGGCTTaGGAGCAGAAGAAACTGATA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVEGKLA*EQKKLI
Trigger: TATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTC...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGATCGTGTGTCCTATTTaGGCAGTGCATCTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: QISNMAQRAKVALSTKALIVCPI*AVHLLK
Trigger: CTTTAAAAGATGCACTGCCCAAATAGGACACACGAT...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCACAAAGGGCTAAAGTaGCTCTCTCTACTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVHKGLK*LSLLKP
Trigger: AGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTG...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAAGCACAGCTCAGAACTaGACAGCACAGTATTCATGC +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPSTAQN*TAQYSC
Trigger: GCATGAATACTGTGCTGTTCAGTTCTGAGCTGTGCT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCCAAGGTATATACCTTaGGGGAGTTATCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSPRYIP*GSYHSC
Trigger: ACAGCTATGATAACTCCCTCAAGGTATATACCTTGG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCCAAATAGTATGTACTaGCTTGAGGAAAACACAGAA +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFPNSMY*LEENTE
Trigger: TTCTGTGTTTTCCTCAAGTCAGTACATACTATTTGG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATTGCTGCTGCAGCCATTaGTCTTCCTTTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYCCCSH*SSFEGY
Trigger: ATACCCTTCAAAGGAAGAGCAATGGCTGCAGCAGCA...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCATGCTGCTGCAGCCATTaGTCTTCCTTTGAAGGGTAT +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPCCCSH*SSFEGY
Trigger: ATACCCTTCAAAGGAAGAGCAATGGCTGCAGCAGCA...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCTAAAGCCTTGGAAGTaGCTAATTGCTAATCAAACT +
Preference number: 4 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFLKPWK*LIANQT
Trigger: AGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTCATGCCCATACTCCTaGAGAACTGCTTTATACCTT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVSCPYS*RTALYL
Trigger: AAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCTACCACTTGACTATTaGACTTCTCAACTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSLPLDY*TSQLQP
Trigger: TGGCTGAAGTTGAGAAGTCCAATAGTCAAGTGGTAG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCCACCCTTAGGAAAATaGAGAATTTCCTTGCGACTA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVPPLGK*RISLRL
Trigger: TAGTCGCAAGGAAATTCTCCATTTTCCTAAGGGTGG...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCATTTCTCATCCCCTATaGGGTGGAATATCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSISHPL*GGISSQ
Trigger: CTGAGAAGATATTCCACCCCATAGGGGATGAGAAAT...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCGGCAAATTTCAAACATaGCACAAAGGGCTAAAGTGG +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSGKFQT*HKGLKW
Trigger: CCACTTTAGCCCTTTGTGCCATGTTTGAAATTTGCC...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACTGAAGCATGCACAGTaGATCCAATCAGAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPLKHAQ*IQSEFK
Trigger: CTTGAACTCTGATTGGATTCACTGTGCATGCTTCAG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCAAGAGAGAGGTAGTATaGAAAATGATGAGCCCTAGA +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSKREVV*KMMSPR
Trigger: TCTAGGGCTCATCATTTTTCATACTACCTCTCTCTT...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAATAGTGCTTTTGGCTaGATTTTGACCTGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVNSAFG*ILTWVD
Trigger: ATCTACCCAGGTCAAAATTCAGCCAAAAGCACTATT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATAACTGCTTTATACCTTaGCTGAAGGTCCTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: YPNLLTISAFVCLFPASYNCFIP*LKVLGD
Trigger: GTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR GCA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAATATCAGCATTTGTTTaGTTATTCCCAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKISAFV*LFPASY
Trigger: ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATAT...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCAGCTTCCTATGCTTTaGCATAATTCCAACCCATAT +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSQLPML*HNSNPY
Trigger: ATATGGGTTGGAATTATGCCAAAGCATAGGAAGCTG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCATGAACACCAGAGATaGAGAAACAGTTCTCAATTA +
Preference number: 4 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVHEHQR*RNSSQL
Trigger: TAATTGAGAACTGTTTCTTCATCTCTGGTGTTCATG...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCTTTGGCAGCTATTATaGTACAATCCAAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: IMLREYDVLNVTERWSRSLWQLL*YNPKKH
Trigger: GTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR TCA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAAATAGTGCTTTTGGCTaGATTTTGACCTGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPNSAFG*ILTWVD
Trigger: ATCTACCCAGGTCAAAATTCAGCCAAAAGCACTATT...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp TCCCGGCAGGGCTCACATAACACCAAACCACAGCTCCGGCAGAATTaGCGGGGCAGACGCCGCCCACAGGACCGACACATGAGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: SRQGSHNTKPQLRQN*RGRRRPQDRHMSSP
Trigger: GGGGCTGCTCATGTGTCGGTCCTGTGGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTGTGGTTTGGTGTTATGTGAGCCCTGCCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CCA 90 bp GCCCATACTCCTGGAGAACTGCTTTATACCTTGCCTGAAGGTCCTTaGAGACACCTTCCAAGGCTGCCTTCCGCCGCTGCAGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: AHTPGELLYTLPEGP*RHLPRLPSAAAAPP
Trigger: TGGGGGAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp TGGTATGGCCACAGTGCAGAAGCTTGGGACGCAGCTGCTCTTCTGTaGAGGACTCCATGCAGATGGGGCATTCTAGCACTTCCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: WYGHSAEAWDAAALL*RTPCRWGILALPGG
Trigger: CCCTCCGGGAAGTGCTAGAATGCCCCATCTGCATGGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 90 bp TCCTCAGCTGCTTCTTTGACAGGGAGTGTACAGTGGCCAGGAGGCTaGTGGTCTGCCTCCCGGCAGGGCTCACATAACACCAAACCACAG +
Preference number: 5 (lower is better)
Translates to: SSAASLTGSVQWPGG*WSASRQGSHNTKPQ
Trigger: CTGTGGTTTGGTGTTATGTGAGCCCTGCCGGGAGGCAGACCATCAGCCTCCTGGCCACTGTACACTCCCTGTCAAAGAAGCAGCTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 90 bp TTAACTTCTCTCCAAAGTCCCGACGCCGCTCCTCAGCTGCTTCTTTaGCAGGGAGTGTACAGTGGCCAGGAGGCTGATGGTCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LTSLQSPDAAPQLLL*QGVYSGQEADGLPP
Trigger: GGGAGGCAGACCATCAGCCTCCTGGCCACTGTACACTCCCTGTCAAAGAAGCAGCTGAGGAGCGGCGTCGGGACTTTGGAGAGAAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 90 bp CGCTCCTCATGCCCATACTCCTGGAGAACTGCTTTATACCTTGCCTaGAGGTCCTTGGAGACACCTTCCAAGGCTGCCTTCCGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RSSCPYSWRTALYLA*RSLETPSKAAFRRC
Trigger: GCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp GCCAATAGCTTCTCCAGGCACTGGCGGCAGATGGTATGGCCACAGTaGAGAAGCTTGGGACGCAGCTGCTCTTCTGTGAAGGACTCCATG +
Preference number: 5 (lower is better)
Translates to: ANSFSRHWRQMVWPQ*RSLGRSCSSVKDSM
Trigger: CATGGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCTATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS GCA 90 bp TGCTTTATACCTTGCCTGAAGGTCCTTGGAGACACCTTCCAAGGCTaGCTTCCGCCGCTGCAGCTCCCCCATAAGTTCCCGCAGACGAGT +
Preference number: 5 (lower is better)
Translates to: CFIPCLKVLGDTFQG*LPPLQLPHKFPQTS
Trigger: ACTCGTCTGCGGGAACTTATGGGGGAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp CCTGCGCTCCTCATGCCCATACTCCTGGAGAACTGCTTTATACCTTaGCTGAAGGTCCTTGGAGACACCTTCCAAGGCTGCCTTCCGCCG +
Preference number: 5 (lower is better)
Translates to: PALLMPILLENCFIP*LKVLGDTFQGCLPP
Trigger: CGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp CCTGGAGTGCTGCCTTTGGCCCCCATCTTCTTGAGAAAGAGGCACTaGTGGATATTGGAGGCTGCCTCAGGACCCCGCTGTTTAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PGVLPLAPIFLRKRH*WILEAASGPRCLAG
Trigger: ACCTGCTAAACAGCGGGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp CCATCAGGGCCTACAGAGCCAATGGAAAAGCCACCCTCCAGGTGGTaGTCATTCTGCCGATTCTCCAGATTGAGGCCTAAGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PSGPTEPMEKPPSRW*SFCRFSRLRPKPWV
Trigger: CACCCAGGGCTTAGGCCTCAATCTGGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp TGCCCATCAGGGCCTACAGAGCCAATGGAAAAGCCACCCTCCAGGTaGTGCTCATTCTGCCGATTCTCCAGATTGAGGCCTAAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: CPSGPTEPMEKPPSR*CSFCRFSRLRPKPW
Trigger: CCAGGGCTTAGGCCTCAATCTGGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCCCTGATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp GATGGCAAGGCTGTGATACCCCATGGTTTGCTCAGCTGGCTCCTGTaGCAGGCCACGCAGTGGCCATCCAAGGTATATACCTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: DGKAVIPHGLLSWLL*QATQWPSKVYTLRE
Trigger: CTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCCAGCTGAGCAAACCATGGGGTATCACAGCCTTGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp CACCTTCCACATCGGTTACTACAAACTGGCCAGATGGCAAGGCTGTaGTACCCCATGGTTTGCTCAGCTGGCTCCTGTGACAGGCCACGC +
Preference number: 5 (lower is better)
Translates to: HLPHRLLQTGQMARL*YPMVCSAGSCDRPR
Trigger: GCGTGGCCTGTCACAGGAGCCAGCTGAGCAAACCATGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp TGGCGGCAGATGGTATGGCCACAGTGCAGAAGCTTGGGACGCAGCTaGTCTTCTGTGAAGGACTCCATGCAGATGGGGCATTCTAGCACT +
Preference number: 5 (lower is better)
Translates to: WRQMVWPQCRSLGRS*SSVKDSMQMGHSST
Trigger: AGTGCTAGAATGCCCCATCTGCATGGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CCA 90 bp ATGCTACTGGCCAATAGCTTCTCCAGGCACTGGCGGCAGATGGTATaGCCACAGTGCAGAAGCTTGGGACGCAGCTGCTCTTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: MLLANSFSRHWRQMV*PQCRSLGRSCSSVK
Trigger: CTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCTATTGGCCAGTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CCA 90 bp GCCAAAGAGCCTGTGAAGAACTTCCGAGAGCGAGCCAGCTCATCCTaGACCCTGCGCTCCTCATGCCCATACTCCTGGAGAACTGCTTTA +
Preference number: 5 (lower is better)
Translates to: AKEPVKNFRERASSS*TLRSSCPYSWRTAL
Trigger: TAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGTCCAGGATGAGCTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp CACATGCCAGCAATGCAGCGGAAATCCTCATTCTCCGAGAAGAAGTaGCTAATCTGGCGACCCAGCTGCCCATCAGGGCCTACAGAGCCA +
Preference number: 5 (lower is better)
Translates to: HMPAMQRKSSFSEKK*LIWRPSCPSGPTEP
Trigger: TGGCTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAATGAGGATTTCCGCTGCATTGCTGGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp CCTCCTCATCAGCTGTCTCCTCCAGTAGTGCTACATCTGCCTGCTTaGTCTTGGCCAGGAAGTAGTCACAGCGAGACACAGCCTGCACCT +
Preference number: 5 (lower is better)
Translates to: PPHQLSPPVVLHLPA*SWPGSSHSETQPAP
Trigger: AGGTGCAGGCTGTGTCTCGCTGTGACTACTTCCTGGCCAAGATCAAGCAGGCAGATGTAGCACTACTGGAGGAGACAGCTGATGAGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp GTCCGGGGCTTCTTAACAGCTTGTCCAATTTGGAGGGGGCCAACATaGCCTACCTTAAGGAGCTCCACATCTTGCAGGGTGAGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: VRGFLTACPIWRGPT*PTLRSSTSCRVSSR
Trigger: TCGGGAGCTCACCCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGACAAGCTGTTAAGAAGCCCCGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp GGCTCCTGTGACAGGCCACGCAGTGGCCATCCAAGGTATATACCTTaGGGGAGTTATCATAGCTGTCAGTCACACCAATCAGCCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GSCDRPRSGHPRYIP*GSYHSCQSHQSAPG
Trigger: GCCAGGGGCTGATTGGTGTGACTGACAGCTATGATAACTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp CTCATCCTGGACCCTGCGCTCCTCATGCCCATACTCCTGGAGAACTaGTTTATACCTTGCCTGAAGGTCCTTGGAGACACCTTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LILDPALLMPILLEN*FIPCLKVLGDTFQG
Trigger: GCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGTCCAGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 90 bp AAATCCTCATTCTCCGAGAAGAAGTGGCTAATCTGGCGACCCAGCTaGCCATCAGGGCCTACAGAGCCAATGGAAAAGCCACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KSSFSEKKWLIWRPS*PSGPTEPMEKPPSR
Trigger: CCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAATGAGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp GCAATGCAGCGGAAATCCTCATTCTCCGAGAAGAAGTGGCTAATCTaGCGACCCAGCTGCCCATCAGGGCCTACAGAGCCAATGGAAAAG +
Preference number: 5 (lower is better)
Translates to: AMQRKSSFSEKKWLI*RPSCPSGPTEPMEK
Trigger: CTTTTCCATTGGCTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAATGAGGATTTCCGCTGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATACAGCTCCGGCAGAATaGCCGGGGCAGACGCCGCCC +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHTAPAE*PGQTPP
Trigger: GGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTGT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTACAGCTCCGGCAGAATaGCCGGGGCAGACGCCGCCC +
Preference number: 5 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFTAPAE*PGQTPP
Trigger: GGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTGT...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 90 bp CTACCACTTGACTATTGGACTTCTCAACTTCAGCCAAAGAGCCTGTaGAGAACTTCCGAGAGCGAGCCAGCTCATCCTGGACCCTGCGCT +
Preference number: 5 (lower is better)
Translates to: LPLDYWTSQLQPKSL*RTSESEPAHPGPCA
Trigger: AGCGCAGGGTCCAGGATGAGCTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTGAAGTTGAGAAGTCCAATAGTCAAGTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp CCAAAGCTTTCCACCTTCCACATCGGTTACTACAAACTGGCCAGATaGCAAGGCTGTGATACCCCATGGTTTGCTCAGCTGGCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: PKLSTFHIGYYKLAR*QGCDTPWFAQLAPV
Trigger: CACAGGAGCCAGCTGAGCAAACCATGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTGGAAAGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGTGCCGATTCTCCAGATaGAGGCCTAAGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQCRFSR*RPKPWV
Trigger: CACCCAGGGCTTAGGCCTCAATCTGGAGAATCGGCA...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCAGTTGCTCTTTGGCTaGCCATCAGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFQLLFG*PSALHL
Trigger: TAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTGTTATGCGGGTAATCTaGCTGCAAAAGGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFVMRVI*LQKGQR
Trigger: CCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAAC...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAAGGCACTGCTGGATATaGGAGGCTGCCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTRHCWI*EAASGP
Trigger: GGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCCT...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGCAGTTGCTCTTTGGCTaGCCATCAGCCCTGCACCTA +
Preference number: 5 (lower is better)
Translates to: SPLCWPWPMLYNSLDTGQQLLFG*PSALHL
Trigger: TAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTG...CTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACAAAGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp ACCTTGACTGGTCACGTAGAGACTGACTGGAAGATTGAACATTCCTaGAGTGCTGCCTTTGGCCCCCATCTTCTTGAGAAAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: TLTGHVETDWKIEHS*SAAFGPHLLEKEAL
Trigger: CAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGTTCAATCTTCCAGTCAGTCTCTACGTGACCAGTCAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp GTGAAACACCAAAGCTTTCCACCTTCCACATCGGTTACTACAAACTaGCCAGATGGCAAGGCTGTGATACCCCATGGTTTGCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VKHQSFPPSTSVTTN*PDGKAVIPHGLLSW
Trigger: CCAGCTGAGCAAACCATGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTGGAAAGCTTTGGTGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTCTGCTCCTCTACCACTaGACTATTGGACTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFLLLYH*TIGLLN
Trigger: GTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCAG...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATAGGCACTGCTGGATATaGGAGGCTGCCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHRHCWI*EAASGP
Trigger: GGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCCT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGGAAGGGAAGTTGGCTaGGGAGCAGAAGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREGREVG*GAEETD
Trigger: ATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTCC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AACATGAAAATGTGTCCACCTCTCCACTTTGTTGGCCCTGGCCTATGTTGTACAGTCCACCTCTCCACTTaGTTGGCCCTGGCCTATGTT +
Preference number: 5 (lower is better)
Translates to: NMKMCPPLHFVGPGLCCTVHLST*LALAYV
Trigger: AACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGAC...TGTACAACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGACACATTTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGCCATTGCTCTTCCTTaGAAGGGTATTGCTAGCACA +
Preference number: 5 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREAIALP*KGIAST
Trigger: TGTGCTAGCAATACCCTTCAAAGGAAGAGCAATGGC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGCCACAGTGCAGAAGCTaGGGACGCAGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: QISNMAQRAKVALSTKALPQCRS*GRSCSS
Trigger: AGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGG...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGAACTGCTTTATACCTaGCCTGAAGGTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREELLYT*PEGPWR
Trigger: TCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGCCTGGAGTGCTGCCTTaGGCCCCCATCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: QISNMAQRAKVALSTKALPGVLP*APIFLR
Trigger: TCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGG...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCCTGGAGTGCTGCCTTaGGCCCCCATCTTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHPGVLP*APIFLR
Trigger: TCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGG...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGGCTCAGAATAGGGTATaGGTGACTCTAAACCTTGGG +
Preference number: 5 (lower is better)
Translates to: CWPWPMLYNSLDTGQKREAQNRV*VTLNLG
Trigger: CCCAAGGTTTAGAGTCACCAATACCCTATTCTGAGC...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 90 bp CCAGCTGTATCAATGATCTTTAGCACTGTCAGATTGTCTGTCAGCTaGGTCAAGCTGGTTATGCGGGTAATCTTGCTGCAAAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: PAVSMIFSTVRLSVS*VKLVMRVILLQKGQ
Trigger: CTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCTTGACCCAGCTGACAGACAATCTGACAGTGCTAAAGATCATTGATACAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACCACAGTGCAGAAGCTaGGGACGCAGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSPQCRS*GRSCSS
Trigger: AGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGGACAGCGGACACCATaGATGCTACTGGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKGQRTP*MLLANS
Trigger: GCTATTGGCCAGTAGCATCAATGGTGTCCGCTGTCC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCATGCCGATTCTCCAGATaGAGGCCTAAGCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSCRFSR*RPKPWV
Trigger: CACCCAGGGCTTAGGCCTCAATCTGGAGAATCGGCA...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATTGGCCCTGGCCTATGTaGTACAATTCCTTAGACACA +
Preference number: 5 (lower is better)
Translates to: SKAVALWLAISPAPRVRYWPWPM*YNSLDT
Trigger: TGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCA...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATGTCCACCTCTCCACTTaGTTGGCCCTGGCCTATGTT +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHVHLST*LALAYV
Trigger: AACATAGGCCAGGGCCAACAAAGTGGAGAGGTGGAC...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAAGTTATGCGGGTAATCTaGCTGCAAAAGGGACAGCGG +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKVMRVI*LQKGQR
Trigger: CCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAAC...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATAACAGCTTGTCCAATTaGGAGGGGGCCAACATGACC +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHNSLSN*EGANMT
Trigger: GGTCATGTTGGCCCCCTCCAAATTGGACAAGCTGTT...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATTGCTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCATAGGCAGCTGTATTaGACCACCCCTGATCCTCGA +
Preference number: 5 (lower is better)
Translates to: IANQTSANTIVCPIWAVHHRQLY*TTPDPR
Trigger: TCGAGGATCAGGGGTGGTCAAATACAGCTGCCTATG...ATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AGTAAGGCAGTTGCTCTTTGGCTTGCCATCAGCCCTGCACCTAGAGTAAGATATATCAAAGTAAGGCAGTaGCTCTTTGGCTTGCCATCA +
Preference number: 5 (lower is better)
Translates to: SKAVALWLAISPAPRVRYIKVRQ*LFGLPS
Trigger: TGATGGCAAGCCAAAGAGCAACTGCCTTACTTTGAT...ATATCTTACTCTAGGTGCAGGGCTGATGGCAAGCCAAAGAGCAACTGCCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCAAACAGCTTGTCCAATTaGGAGGGGGCCAACATGACC +
Preference number: 5 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSNSLSN*EGANMT
Trigger: GGTCATGTTGGCCCCCTCCAAATTGGACAAGCTGTT...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCTTGGCCCCCATCTTCTaGAGAAAGAGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: IMLREYDVLNVTERWSRSLAPIF*RKRHCW
Trigger: CCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAA...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TGTTGGCCCTGGCCTATGTTGTACAATTCCTTAGACACAGGCCAGAAGAGAGAGTCCTTCAAAAAGCCTTaGCGGGTAAAGACTTGTATA +
Preference number: 5 (lower is better)
Translates to: CWPWPMLYNSLDTGQKRESFKKP*RVKTCI
Trigger: TATACAAGTCTTTACCCGCAAAGGCTTTTTGAAGGA...CTCTCTCTTCTGGCCTGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCCTCTCACATAGGCAGCTGTATTaGACCACCCCTGATCCTCGA +
Preference number: 5 (lower is better)
Translates to: IYYLVNTKPSGTSSQVLSHRQLY*TTPDPR
Trigger: TCGAGGATCAGGGGTGGTCAAATACAGCTGCCTATG...TGAGAGGACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATCACAGGTGACAAATTaGGGCCGCACAGCACTACAT +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKSQVTN*GRTALH
Trigger: ATGTAGTGCTGTGCGGCCCAAATTTGTCACCTGTGA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTTGCTTCCTAAAGGGCTaGTGTATCCCCTTTGGTAGC +
Preference number: 5 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFCFLKG*CIPFGS
Trigger: GCTACCAAAGGGGATACACAAGCCCTTTAGGAAGCA...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ACAGATCCTCCAGGCGAGAGGTACTGCTTCCTAAAGGGCTTGTGTATCCCCTTTTATATCAGCATTTGTTaGCTTATTCCCAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: TDPPGERYCFLKGLCIPFYISIC*LIPSFL
Trigger: TAGGAAGCTGGGAATAAGCAAACAAATGCTGATATA...AAAGGGGATACACAAGCCCTTTAGGAAGCAGTACCTCTCGCCTGGAGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTGCCATTGCTCTTCCTTaGAAGGGTATTGCTAGCACA +
Preference number: 5 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFAIALP*KGIAST
Trigger: TGTGCTAGCAATACCCTTCAAAGGAAGAGCAATGGC...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATTTAGCACTGTCAGATaGTCTGTCAGCTGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKFSTVR*SVSWVK
Trigger: CTTGACCCAGCTGACAGACAATCTGACAGTGCTAAA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATGGCCCTGGCCTATGTaGTACAATTCCTTAGACACA +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKWPWPM*YNSLDT
Trigger: TGTGTCTAAGGAATTGTACAACATAGGCCAGGGCCA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AAGTGGCTCTCTCTACTAAAGCCTTGGAAGTGCCTAATTGCTAATCAAACTTCATTTAGCACTGTCAGATaGTCTGTCAGCTGGGTCAAG +
Preference number: 5 (lower is better)
Translates to: KWLSLLKPWKCLIANQTSFSTVR*SVSWVK
Trigger: CTTGACCCAGCTGACAGACAATCTGACAGTGCTAAA...TGAAGTTTGATTAGCAATTAGGCACTTCCAAGGCTTTAGTAGAGAGAGCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATTTGGCCCCCATCTTCTaGAGAAAGAGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: YPNLLTISAFVCLFPASYLAPIF*RKRHCW
Trigger: CCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAA...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCGAACTGCTTTATACCTaGCCTGAAGGTCCTTGGAGA +
Preference number: 5 (lower is better)
Translates to: IMLREYDVLNVTERWSRSELLYT*PEGPWR
Trigger: TCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTC...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CAAATTTCAAACATGGCACAAAGGGCTAAAGTGGCTCTCTCTACTAAAGCCTTGTTTGCGGGTAAAGACTaGTATACGATAGTTACCACG +
Preference number: 5 (lower is better)
Translates to: QISNMAQRAKVALSTKALFAGKD*YTIVTT
Trigger: CGTGGTAACTATCGTATACAAGTCTTTACCCGCAAA...CAAGGCTTTAGTAGAGAGAGCCACTTTAGCCCTTTGTGCCATGTTTGAAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCAAATGGAGAATTTCCTaGCGACTACTGTCAGCCACG +
Preference number: 5 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVKWRIS*RLLSAT
Trigger: CGTGGCTGACAGTAGTCGCAAGGAAATTCTCCATTT...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp CTAATCAAACTTCAGCTAACACCATCGTGTGTCCTATTTGGGCAGTGCATCTTTCATCGTGTGTCCTATTaGGGCAGTGCATCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LIKLQLTPSCVLFGQCIFHRVSY*GSASFK
Trigger: TTTAAAAGATGCACTGCCCAAATAGGACACACGATG...AAAGATGCACTGCCCAAATAGGACACACGATGGTGTTAGCTGAAGTTTGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCAGGAAGGGAAGTTGGCTaGGGAGCAGAAGAAACTGAT +
Preference number: 5 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPGREVG*GAEETD
Trigger: ATCAGTTTCTTCTGCTCCCAAGCCAACTTCCCTTCC...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCATGCTTCCTAAAGGGCTaGTGTATCCCCTTTGGTAGC +
Preference number: 5 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPCFLKG*CIPFGS
Trigger: GCTACCAAAGGGGATACACAAGCCCTTTAGGAAGCA...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCACTGCTCCTCTACCACTaGACTATTGGACTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPLLLYH*TIGLLN
Trigger: GTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCAG...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp AGTAAGATATATTACTTAGTAAACACCAAACCCTCAGGAACCTCATCACAGGTCTTTGCGGGTAAAGACTaGTATACGATAGTTACCACG +
Preference number: 5 (lower is better)
Translates to: SKIYYLVNTKPSGTSSQVFAGKD*YTIVTT
Trigger: CGTGGTAACTATCGTATACAAGTCTTTACCCGCAAA...GACCTGTGATGAGGTTCCTGAGGGTTTGGTGTTTACTAAGTAATATATCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATAAATGGAGAATTTCCTaGCGACTACTGTCAGCCACG +
Preference number: 5 (lower is better)
Translates to: YPNLLTISAFVCLFPASYKWRIS*RLLSAT
Trigger: CGTGGCTGACAGTAGTCGCAAGGAAATTCTCCATTT...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp GAGATAAGGAAGCAAAATGGCATAGCGCAGGTTATCCCTCTTATCATCTCCAAATATATCAGCATTTGTTaGCTTATTCCCAGCTTCCTA +
Preference number: 5 (lower is better)
Translates to: EIRKQNGIAQVIPLIISKYISIC*LIPSFL
Trigger: TAGGAAGCTGGGAATAAGCAAACAAATGCTGATATA...TTTGGAGATGATAAGAGGGATAACCTGCGCTATGCCATTTTGCTTCCTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp ATAATGTTACGGGAATATGATGTCTTAAATGTCACTGAAAGGTGGAGCAGATCCCTCTTTACCTATCCTTaGGCAGCTATTATGATACAA +
Preference number: 5 (lower is better)
Translates to: IMLREYDVLNVTERWSRSLFTYP*AAIMIQ
Trigger: TTGTATCATAATAGCTGCCAAAGGATAGGTAAAGAG...GGATCTGCTCCACCTTTCAGTGACATTTAAGACATCATATTCCCGTAACATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TTTACCTATCCTTTGGCAGCTATTATGATACAATCCAAAGAAACACTACTACCATCCTTCAAAAAGCCTTaGCGGGTAAAGACTTGTATA +
Preference number: 5 (lower is better)
Translates to: FTYPLAAIMIQSKETLLPSFKKP*RVKTCI
Trigger: TATACAAGTCTTTACCCGCAAAGGCTTTTTGAAGGA...TGGTAGTAGTGTTTCTTTGGATTGTATCATAATAGCTGCCAAAGGATAGGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS-3UTR CAA 90 bp TATCCAAATTTGCTGACTATATCAGCATTTGTTTGCTTATTCCCAGCTTCCTATCTCTTTACCTATCCTTaGGCAGCTATTATGATACAA +
Preference number: 5 (lower is better)
Translates to: YPNLLTISAFVCLFPASYLFTYP*AAIMIQ
Trigger: TTGTATCATAATAGCTGCCAAAGGATAGGTAAAGAG...ATAGGAAGCTGGGAATAAGCAAACAAATGCTGATATAGTCAGCAAATTTGGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp GGCTCACATAACACCAAACCACAGCTCCGGCAGAATTaGCGGGGCAGACGCCGCCCACAGGACCGACACATG +
Preference number: 6 (lower is better)
Translates to: GSHNTKPQLRQN*RGRRRPQDRHM
Trigger: CATGTGTCGGTCCTGTGGGCGGCGTCTGCCCCGGCAATTCTGCCGGAGCTGTGGTTTGGTGTTATGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS GCA 72 bp CCTTGCCTGAAGGTCCTTGGAGACACCTTCCAAGGCTaGCTTCCGCCGCTGCAGCTCCCCCATAAGTTCCCG +
Preference number: 6 (lower is better)
Translates to: PCLKVLGDTFQG*LPPLQLPHKFP
Trigger: CGGGAACTTATGGGGGAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp CTCAAACTTCCAAAAGCTCTTTCCCCATCACTCATCTaGCCGCCCGCGGCTCCGACGAGTCCACCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: LKLPKALSPSLI*PPAAPTSPPPA
Trigger: TGCCGGCGGTGGACTCGTCGGAGCCGCGGGCGGTCAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411410.1
CDS TCA 72 bp CTCCAAAGTCCCGACGCCGCTCCTCAGCTGCTTCTTTaGCAGGGAGTGTACAGTGGCCAGGAGGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: LQSPDAAPQLLL*QGVYSGQEADG
Trigger: ACCATCAGCCTCCTGGCCACTGTACACTCCCTGTCAAAGAAGCAGCTGAGGAGCGGCGTCGGGACTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS GCA 72 bp TCCTTGGAGACACCTTCCAAGGCTGCCTTCCGCCGCTaGAGCTCCCCCATAAGTTCCCGCAGACGAGTTAAC +
Preference number: 6 (lower is better)
Translates to: SLETPSKAAFRR*SSPISSRRRVN
Trigger: GTTAACTCGTCTGCGGGAACTTATGGGGGAGCTGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp GCCAATAGCTTCTCCAGGCACTGGCGGCAGATGGTATaGCCACAGTGCAGAAGCTTGGGACGCAGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: ANSFSRHWRQMV*PQCRSLGRSCS
Trigger: AGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCTATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CCA 72 bp CCTGTGAAGAACTTCCGAGAGCGAGCCAGCTCATCCTaGACCCTGCGCTCCTCATGCCCATACTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: PVKNFRERASSS*TLRSSCPYSWR
Trigger: TCTCCAGGAGTATGGGCATGAGGAGCGCAGGGTCCAGGATGAGCTGGCTCGCTCTCGGAAGTTCTTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp GGGGCCAACATGACCTACCTTAAGGAGCTCCACATCTaGCAGGGTGAGCTCCCGAGGCAAGCTGGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: GANMTYLKELHI*QGELPRQAGSE
Trigger: CTCACTGCCAGCTTGCCTCGGGAGCTCACCCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp TTCTCCAGGCACTGGCGGCAGATGGTATGGCCACAGTGCAGAAGCTaGGGACGCAGCTGCTCTTCTGTGAAGGACTCCATGCAGATGGGG +
Preference number: 6 (lower is better)
Translates to: FSRHWRQMVWPQCRS*GRSCSSVKDSMQMG
Trigger: CCCCATCTGCATGGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 90 bp CCCTGCGCTCCTCATGCCCATACTCCTGGAGAACTGCTTTATACCTaGCCTGAAGGTCCTTGGAGACACCTTCCAAGGCTGCCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: PCAPHAHTPGELLYT*PEGPWRHLPRLPSA
Trigger: GGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp AATTTGGAGGGGGCCAACATGACCTACCTTAAGGAGCTCCACATCTaGCAGGGTGAGCTCCCGAGGCAAGCTGGCAGTGAGCTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: NLEGANMTYLKELHI*QGELPRQAGSELWL
Trigger: GAGCCAGAGCTCACTGCCAGCTTGCCTCGGGAGCTCACCCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp TTCTCCAGGCACTGGCGGCAGATGGTATGGCCACAGTaGAGAAGCTTGGGACGCAGCTGCTCTTCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: FSRHWRQMVWPQ*RSLGRSCSSVK
Trigger: CTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS GCA 72 bp GAGCGAGCCAGCTCATCCTGGACCCTGCGCTCCTCATaGCCATACTCCTGGAGAACTGCTTTATACCTTGCC +
Preference number: 6 (lower is better)
Translates to: ERASSSWTLRSS*PYSWRTALYLA
Trigger: GGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGTCCAGGATGAGCTGGCTCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp CTGCCTTTGGCCCCCATCTTCTTGAGAAAGAGGCACTaGTGGATATTGGAGGCTGCCTCAGGACCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: LPLAPIFLRKRH*WILEAASGPRC
Trigger: ACAGCGGGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp TACTGGCCAATAGCTTCTCCAGGCACTGGCGGCAGATaGTATGGCCACAGTGCAGAAGCTTGGGACGCAGCT +
Preference number: 6 (lower is better)
Translates to: YWPIASPGTGGR*YGHSAEAWDAA
Trigger: AGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTGCCTGGAGAAGCTATTGGCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 72 bp CACTGGCGGCAGATGGTATGGCCACAGTGCAGAAGCTaGGGACGCAGCTGCTCTTCTGTGAAGGACTCCATG +
Preference number: 6 (lower is better)
Translates to: HWRQMVWPQCRS*GRSCSSVKDSM
Trigger: CATGGAGTCCTTCACAGAAGAGCAGCTGCGTCCCAAGCTTCTGCACTGTGGCCATACCATCTGCCGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 72 bp GCTGTGATACCCCATGGTTTGCTCAGCTGGCTCCTGTaGCAGGCCACGCAGTGGCCATCCAAGGTATATACC +
Preference number: 6 (lower is better)
Translates to: AVIPHGLLSWLL*QATQWPSKVYT
Trigger: GGTATATACCTTGGATGGCCACTGCGTGGCCTGTCACAGGAGCCAGCTGAGCAAACCATGGGGTATCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp CCAATGGAAAAGCCACCCTCCAGGTGGTGCTCATTCTaGCGATTCTCCAGATTGAGGCCTAAGCCCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PMEKPPSRWCSF*RFSRLRPKPWV
Trigger: CACCCAGGGCTTAGGCCTCAATCTGGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTTTTCCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp CCTGGAGAACTGCTTTATACCTTGCCTGAAGGTCCTTaGAGACACCTTCCAAGGCTGCCTTCCGCCGCTGCA +
Preference number: 6 (lower is better)
Translates to: PGELLYTLPEGP*RHLPRLPSAAA
Trigger: TGCAGCGGCGGAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp GGGCCTACAGAGCCAATGGAAAAGCCACCCTCCAGGTaGTGCTCATTCTGCCGATTCTCCAGATTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GPTEPMEKPPSR*CSFCRFSRLRP
Trigger: AGGCCTCAATCTGGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp CGGAAATCCTCATTCTCCGAGAAGAAGTGGCTAATCTaGCGACCCAGCTGCCCATCAGGGCCTACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: RKSSFSEKKWLI*RPSCPSGPTEP
Trigger: TGGCTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAATGAGGATTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp GCAATGCAGCGGAAATCCTCATTCTCCGAGAAGAAGTaGCTAATCTGGCGACCCAGCTGCCCATCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: AMQRKSSFSEKK*LIWRPSCPSGP
Trigger: AGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAATGAGGATTTCCGCTGCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp CACTTCCCGGAGGGCATCCAGGTTCAGGTGAGAAGCTaGTGCTGCAGCCATTGCTCTTCCTTTGAAGGGTAT +
Preference number: 6 (lower is better)
Translates to: HFPEGIQVQVRS*CCSHCSSFEGY
Trigger: ATACCCTTCAAAGGAAGAGCAATGGCTGCAGCAGCAGCTTCTCACCTGAACCTGGATGCCCTCCGGGAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS GCA 72 bp GACCCTGCGCTCCTCATGCCCATACTCCTGGAGAACTaGTTTATACCTTGCCTGAAGGTCCTTGGAGACACC +
Preference number: 6 (lower is better)
Translates to: DPALLMPILLEN*FIPCLKVLGDT
Trigger: GGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGGAGCGCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp TTCTCCGAGAAGAAGTGGCTAATCTGGCGACCCAGCTaGCCATCAGGGCCTACAGAGCCAATGGAAAAGCCA +
Preference number: 6 (lower is better)
Translates to: FSEKKWLIWRPS*PSGPTEPMEKP
Trigger: TGGCTTTTCCATTGGCTCTGTAGGCCCTGATGGGCAGCTGGGTCGCCAGATTAGCCACTTCTTCTCGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp CTGGTTATGCGGGTAATCTTGCTGCAAAAGGGACAGCGGACACCATaGATGCTACTGGCCAATAGCTTCTCCAGGCACTGGCGGCAGATG +
Preference number: 6 (lower is better)
Translates to: LVMRVILLQKGQRTP*MLLANSFSRHWRQM
Trigger: CATCTGCCGCCAGTGCCTGGAGAAGCTATTGGCCAGTAGCATCAATGGTGTCCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 90 bp GGAAGATTGAACATTCCTGGAGTGCTGCCTTTGGCCCCCATCTTCTaGAGAAAGAGGCACTGCTGGATATTGGAGGCTGCCTCAGGACCC +
Preference number: 6 (lower is better)
Translates to: GRLNIPGVLPLAPIF*RKRHCWILEAASGP
Trigger: GGGTCCTGAGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGTTCAATCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp ACATTCCTGGAGTGCTGCCTTTGGCCCCCATCTTCTTaGGAAAGAGGCACTGCTGGATATTGGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TFLECCLWPPSS*ERGTAGYWRLP
Trigger: AGGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp CCTACAGAGCCAATGGAAAAGCCACCCTCCAGGTGGTaGTCATTCTGCCGATTCTCCAGATTGAGGCCTAAG +
Preference number: 6 (lower is better)
Translates to: PTEPMEKPPSRW*SFCRFSRLRPK
Trigger: CTTAGGCCTCAATCTGGAGAATCGGCAGAATGAGCACCACCTGGAGGGTGGCTTTTCCATTGGCTCTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp CGGGTAATCTTGCTGCAAAAGGGACAGCGGACACCATaGATGCTACTGGCCAATAGCTTCTCCAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: RVILLQKGQRTP*MLLANSFSRHW
Trigger: CCAGTGCCTGGAGAAGCTATTGGCCAGTAGCATCAATGGTGTCCGCTGTCCCTTTTGCAGCAAGATTACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 72 bp AACATTCCTGGAGTGCTGCCTTTGGCCCCCATCTTCTaGAGAAAGAGGCACTGCTGGATATTGGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: NIPGVLPLAPIF*RKRHCWILEAA
Trigger: GGCAGCCTCCAATATCCAGCAGTGCCTCTTTCTCAAGAAGATGGGGGCCAAAGGCAGCACTCCAGGAATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp GGCCCAGGAATCTTCCACGTTAACTGTCCGGGGCTTCTTAACAGCTaGTCCAATTTGGAGGGGGCCAACATGACCTACCTTAAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: GPGIFHVNCPGLLNS*SNLEGANMTYLKEL
Trigger: GAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGACAAGCTGTTAAGAAGCCCCGGACAGTTAACGTGGAAGATTCCTGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp TGCCCATACTCCTGGAGAACTGCTTTATACCTTGCCTaGAGGTCCTTGGAGACACCTTCCAAGGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: CPYSWRTALYLA*RSLETPSKAAF
Trigger: GAAGGCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS GCA 72 bp CTCATGCCCATACTCCTGGAGAACTGCTTTATACCTTaGCTGAAGGTCCTTGGAGACACCTTCCAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: LMPILLENCFIP*LKVLGDTFQGC
Trigger: GCAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp TCCACCTTCCACATCGGTTACTACAAACTGGCCAGATaGCAAGGCTGTGATACCCCATGGTTTGCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: STFHIGYYKLAR*QGCDTPWFAQL
Trigger: CAGCTGAGCAAACCATGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp CCTCATGCCCATACTCCTGGAGAACTGCTTTATACCTaGCCTGAAGGTCCTTGGAGACACCTTCCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: PHAHTPGELLYT*PEGPWRHLPRL
Trigger: CAGCCTTGGAAGGTGTCTCCAAGGACCTTCAGGCAAGGTATAAAGCAGTTCTCCAGGAGTATGGGCATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp CCAATCAGCCCCTGGCAGTTCATTGCCACTGAGAGAGGAGTGAGGTaGGGTAGATCTGCCCCAAGGAAGCTTAGCACAAAGCTATCAATG +
Preference number: 6 (lower is better)
Translates to: PISPWQFIATERGVR*GRSAPRKLSTKLSM
Trigger: CATTGATAGCTTTGTGCTAAGCTTCCTTGGGGCAGATCTACCCAACCTCACTCCTCTCTCAGTGGCAATGAACTGCCAGGGGCTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp GTCAGATTGTCTGTCAGCTGGGTCAAGCTGGTTATGCGGGTAATCTaGCTGCAAAAGGGACAGCGGACACCATTGATGCTACTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: VRLSVSWVKLVMRVI*LQKGQRTPLMLLAN
Trigger: ATTGGCCAGTAGCATCAATGGTGTCCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCTTGACCCAGCTGACAGACAATCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 90 bp GCCTCGCTGAGCCCAGCTGTATCAATGATCTTTAGCACTGTCAGATaGTCTGTCAGCTGGGTCAAGCTGGTTATGCGGGTAATCTTGCTG +
Preference number: 6 (lower is better)
Translates to: ASLSPAVSMIFSTVR*SVSWVKLVMRVILL
Trigger: CAGCAAGATTACCCGCATAACCAGCTTGACCCAGCTGACAGACAATCTGACAGTGCTAAAGATCATTGATACAGCTGGGCTCAGCGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 72 bp GACTATTGGACTTCTCAACTTCAGCCAAAGAGCCTGTaGAGAACTTCCGAGAGCGAGCCAGCTCATCCTGGA +
Preference number: 6 (lower is better)
Translates to: DYWTSQLQPKSL*RTSESEPAHPG
Trigger: TCCAGGATGAGCTGGCTCGCTCTCGGAAGTTCTTCACAGGCTCTTTGGCTGAAGTTGAGAAGTCCAATAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp TCTGTCAGCTGGGTCAAGCTGGTTATGCGGGTAATCTaGCTGCAAAAGGGACAGCGGACACCATTGATGCTA +
Preference number: 6 (lower is better)
Translates to: SVSWVKLVMRVI*LQKGQRTPLML
Trigger: TAGCATCAATGGTGTCCGCTGTCCCTTTTGCAGCAAGATTACCCGCATAACCAGCTTGACCCAGCTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS TCA 72 bp TTCTTAACAGCTTGTCCAATTTGGAGGGGGCCAACATaGCCTACCTTAAGGAGCTCCACATCTTGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: FLTACPIWRGPT*PTLRSSTSCRV
Trigger: CACCCTGCAAGATGTGGAGCTCCTTAAGGTAGGTCATGTTGGCCCCCTCCAAATTGGACAAGCTGTTAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp GACAGGCCACGCAGTGGCCATCCAAGGTATATACCTTaGGGGAGTTATCATAGCTGTCAGTCACACCAATCA +
Preference number: 6 (lower is better)
Translates to: DRPRSGHPRYIP*GSYHSCQSHQS
Trigger: TGATTGGTGTGACTGACAGCTATGATAACTCCCTCAAGGTATATACCTTGGATGGCCACTGCGTGGCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp AATGGAGAATTTCCTTGCGACTACTGTCAGCCACGATaGGATCACCACGAGCATCCACACACATGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: NGEFPCDYCQPR*DHHEHPHTCQQ
Trigger: TTGCTGGCATGTGTGTGGATGCTCGTGGTGATCTCATCGTGGCTGACAGTAGTCGCAAGGAAATTCTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CCA 72 bp CAAAGCTTTCCACCTTCCACATCGGTTACTACAAACTaGCCAGATGGCAAGGCTGTGATACCCCATGGTTTG +
Preference number: 6 (lower is better)
Translates to: QSFPPSTSVTTN*PDGKAVIPHGL
Trigger: CAAACCATGGGGTATCACAGCCTTGCCATCTGGCCAGTTTGTAGTAACCGATGTGGAAGGTGGAAAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp AATTTGGGCCGCACAGCACTACATAGGCAGCTGTATTaGACCACCCCTGATCCTCGATCAACTGTGAAACAC +
Preference number: 6 (lower is better)
Translates to: NLGRTALHRQLY*TTPDPRSTVKH
Trigger: GTGTTTCACAGTTGATCGAGGATCAGGGGTGGTCAAATACAGCTGCCTATGTAGTGCTGTGCGGCCCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 90 bp CAGGTGACAAATTTGGGCCGCACAGCACTACATAGGCAGCTGTATTaGACCACCCCTGATCCTCGATCAACTGTGAAACACCAAAGCTTT +
Preference number: 6 (lower is better)
Translates to: QVTNLGRTALHRQLY*TTPDPRSTVKHQSF
Trigger: AAAGCTTTGGTGTTTCACAGTTGATCGAGGATCAGGGGTGGTCAAATACAGCTGCCTATGTAGTGCTGTGCGGCCCAAATTTGTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS CAA 72 bp AGCCCAGCTGTATCAATGATCTTTAGCACTGTCAGATaGTCTGTCAGCTGGGTCAAGCTGGTTATGCGGGTA +
Preference number: 6 (lower is better)
Translates to: SPAVSMIFSTVR*SVSWVKLVMRV
Trigger: TACCCGCATAACCAGCTTGACCCAGCTGACAGACAATCTGACAGTGCTAAAGATCATTGATACAGCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 90 bp CTGCACCTCTGCAATGTTAAGCAGGTAACTCTGCTCCTCTACCACTaGACTATTGGACTTCTCAACTTCAGCCAAAGAGCCTGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LHLCNVKQVTLLLYH*TIGLLNFSQRACEE
Trigger: TTCTTCACAGGCTCTTTGGCTGAAGTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTTAACATTGCAGAGGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2
CDS TCA 72 bp CTTCCTTTGAAGGGTATTGCTAGCACAGCTCAGAACTaGACAGCACAGTATTCATGCCCTAGAGGGTCAAAT +
Preference number: 6 (lower is better)
Translates to: LPLKGIASTAQN*TAQYSCPRGSN
Trigger: ATTTGACCCTCTAGGGCATGAATACTGTGCTGTTCAGTTCTGAGCTGTGCTAGCAATACCCTTCAAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373983.2
ENST00000411410.1
ENST00000450136.2
CDS CAA 72 bp TGCAATGTTAAGCAGGTAACTCTGCTCCTCTACCACTaGACTATTGGACTTCTCAACTTCAGCCAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: CNVKQVTLLLYH*TIGLLNFSQRA
Trigger: GGCTCTTTGGCTGAAGTTGAGAAGTCCAATAGTCAAGTGGTAGAGGAGCAGAGTTACCTGCTTAACATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373983.2
ENST00000450136.2