RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM31 (Homo sapiens)

Ensembl gene IDs: ENSG00000137397, ENSG00000224168, ENSG00000226402, ENSG00000233573

Ensembl transcript IDs: ENST00000357569.5, ENST00000376734.4, ENST00000422484.1, ENST00000433864.2, ENST00000445679.2, ENST00000449412.2, ENST00000453266.2, ENST00000455349.2, ENST00000460146.1, ENST00000460861.1, ENST00000461197.1, ENST00000461978.1, ENST00000462071.5, ENST00000468297.1, ENST00000468315.1, ENST00000469791.5, ENST00000470813.5, ENST00000471539.5, ENST00000471695.1, ENST00000473446.1, ENST00000474549.5, ENST00000474867.1, ENST00000474960.5, ENST00000475301.5, ENST00000475332.5, ENST00000475526.5, ENST00000476390.1, ENST00000476528.5, ENST00000477579.5, ENST00000477855.1, ENST00000480808.1, ENST00000481056.5, ENST00000482298.1, ENST00000482344.5, ENST00000482615.5, ENST00000482869.5, ENST00000482981.5, ENST00000483556.1, ENST00000484570.5, ENST00000484583.1, ENST00000485342.1, ENST00000485826.1, ENST00000485864.5, ENST00000486092.5, ENST00000486654.5, ENST00000486990.1, ENST00000488184.5, ENST00000489367.5, ENST00000489466.1, ENST00000492111.5, ENST00000492151.5, ENST00000492228.5, ENST00000492282.1, ENST00000493404.1, ENST00000493823.1, ENST00000493942.5, ENST00000494522.1, ENST00000496472.1, ENST00000497819.5

Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTGGTGCCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTG +
Preference number: 1 (lower is better)
Translates to: TGAFGKQLLKECGDC*RDFLFPLGGTTAKV
Trigger: CACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGGCACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 90 bp CCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAG +
Preference number: 1 (lower is better)
Translates to: PILHSFDPIPLSQEP*SVSATHSAPLYAPK
Trigger: CTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 90 bp TTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTaGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTTTTGCTCAA +
Preference number: 1 (lower is better)
Translates to: FPLGGTTAKVIRSQA*GGWLEIVSSPPFAQ
Trigger: TTGAGCAAAAGGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSARGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: WECKEEREWSGSWGLMDCRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: WECKEEREWSGSWGLMDCQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: WECKEEREWSGSWGLMDCECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: WECKEEREWSGSWGLMDCLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: WECKEEREWSGSWGLMDCKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 2 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CAA 90 bp AGTTTATTAAAGTTAGAAGTGTCTCCATCCACCCCCTACAGAGGCTaGCGTGGTGGTTCCAGTCTGCTAAATATTTCAGAATGGGGACCT +
Preference number: 2 (lower is better)
Translates to: SLLKLEVSPSTPYRG*RGGSSLLNISEWGP
Trigger: AGGTCCCCATTCTGAAATATTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCTAACTTTAATAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 72 bp GGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTaGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCT +
Preference number: 3 (lower is better)
Translates to: GGTTAKVIRSQA*GGWLEIVSSPP
Trigger: AGGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 3 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSASGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 72 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGACCCAGGCTGGCGTTGC +
Preference number: 3 (lower is better)
Translates to: WECKEEREWSGS*GLMDCDPGWRC
Trigger: GCAACGCCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR GCA 72 bp GCCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTTCCACTAGGCGGCACC +
Preference number: 3 (lower is better)
Translates to: AFGKQLLKECGD*CRDFLFPLGGT
Trigger: GGTGCCGCCTAGTGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR GCA 72 bp TTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCACTAGGCGGCACCACA +
Preference number: 3 (lower is better)
Translates to: FGKQLLKECGDC*RDFLFPLGGTT
Trigger: TGTGGTGCCGCCTAGTGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 72 bp CACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCACTCAGCGCCACTCTAT +
Preference number: 3 (lower is better)
Translates to: HSFDPIPLSQEP*SVSATHSAPLY
Trigger: ATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
3UTR CCA 72 bp AGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATATTTCAGAATGGGGACC +
Preference number: 3 (lower is better)
Translates to: SVSIHPLQRLAW*FQSAKYFRMGT
Trigger: GGTCCCCATTCTGAAATATTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCCCCCTACAGAGGCTTaGGTGGTGGTTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWPPTEA*VVVPVC
Trigger: GCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWSLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGACTGCCCACTGGCCATaGCAGAACAACAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVTAHWP*QNNRAV
Trigger: AACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGT...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGACTGCCCACTGGCCATaGCAGAACAACAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWTAHWP*QNNRAV
Trigger: AACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGT...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGGGTTTGATGGACTGTaGCCCAGGCTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIGFDGL*PRLALL
Trigger: GAGCAACGCCAGCCTGGGTCACAGTCCATCAAACCC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSARAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAQPLTQ*RMELLG
Trigger: TCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSQPLTQ*RMELLG
Trigger: TCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCCCCCTACAGAGGCTTaGGTGGTGGTTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIPPTEA*VVVPVC
Trigger: GCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCCCCCTACAGAGGCTTaGGTGGTGGTTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSPPTEA*VVVPVC
Trigger: GCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGCCCGAAACAGGGAGTaGGATGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIARNRE*DGAEEW
Trigger: CCACTCTTCAGCCCCATCCCACTCCCTGTTTCGGGC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGCCCGAAACAGGGAGTaGGATGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSARNRE*DGAEEW
Trigger: CCACTCTTCAGCCCCATCCCACTCCCTGTTTCGGGC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSSLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGTTCTACCTGGTCCGTaGAGACATCGACCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWVLPGP*RHRPCV
Trigger: TACACAGGGTCGATGTCTTCACGGACCAGGTAGAAC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGGGTTTGATGGACTGTaGCCCAGGCTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRGFDGL*PRLALL
Trigger: GAGCAACGCCAGCCTGGGTCACAGTCCATCAAACCC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRRAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCTGGGTGGCATGTTCTaGTTGGTCTTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVLGGMF*LVFRES
Trigger: TGATTCCCTGAAGACCAAGCAGAACATGCCACCCAG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRQPLTQ*RMELLG
Trigger: TCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGCCCGAAACAGGGAGTaGGATGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRARNRE*DGAEEW
Trigger: CCACTCTTCAGCCCCATCCCACTCCCTGTTTCGGGC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVGQETY*KSDFPS
Trigger: GCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRSLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVLQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTACTGCCCACTGGCCATaGCAGAACAACAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEITAHWP*QNNRAV
Trigger: AACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTACTGCCCACTGGCCATaGCAGAACAACAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSATAHWP*QNNRAV
Trigger: AACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVDVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGGGTTTGATGGACTGTaGCCCAGGCTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHGFDGL*PRLALL
Trigger: GAGCAACGCCAGCCTGGGTCACAGTCCATCAAACCC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVRAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCRAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFRAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCTGGGTGGCATGTTCTaGTTGGTCTTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWLGGMF*LVFRES
Trigger: TGATTCCCTGAAGACCAAGCAGAACATGCCACCCAG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSQPLTQ*RMELLG
Trigger: TCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCCCCCTACAGAGGCTTaGGTGGTGGTTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVPPTEA*VVVPVC
Trigger: GCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGCCCGAAACAGGGAGTaGGATGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVARNRE*DGAEEW
Trigger: CCACTCTTCAGCCCCATCCCACTCCCTGTTTCGGGC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGCCCGAAACAGGGAGTaGGATGGGGCTGAAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFARNRE*DGAEEW
Trigger: CCACTCTTCAGCCCCATCCCACTCCCTGTTTCGGGC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLSLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVSLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCAAGCGTGGGGCGGGTaGCTGGAGATTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCQAWGG*LEIVSS
Trigger: GGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWDVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTTCTACCTGGTCCGTaGAGACATCGACCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIVLPGP*RHRPCV
Trigger: TACACAGGGTCGATGTCTTCACGGACCAGGTAGAAC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGTTCTACCTGGTCCGTaGAGACATCGACCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSVLPGP*RHRPCV
Trigger: TACACAGGGTCGATGTCTTCACGGACCAGGTAGAAC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSACTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSCTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVSLFTN*PLAMTE
Trigger: TTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACT...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWPVYTL*LHLYCL
Trigger: GAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIRVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSARVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSALSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCGTGGGGCGGGTGGCTaGAGATTGTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSRGAGG*RLSLPL
Trigger: GAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTACTGCCCACTGGCCATaGCAGAACAACAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCTAHWP*QNNRAV
Trigger: AACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGT...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCTTCTTCGATCAAGCTaGCATTATGGGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVLLRSS*HYGICG
Trigger: ACCACAAATCCCATAATGTCAGCTTGATCGAAGAAG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSADILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGATTTCACTCCTGGCTaGACTGGTGCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSADFTPG*TGAFGK
Trigger: TTTACCGAAGGCACCAGTTCAGCCAGGAGTGAAATC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGGTTTGATGGACTGTaGCCCAGGCTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSGFDGL*PRLALL
Trigger: GAGCAACGCCAGCCTGGGTCACAGTCCATCAAACCC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGGGTTTGATGGACTGTaGCCCAGGCTGGCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAGFDGL*PRLALL
Trigger: GAGCAACGCCAGCCTGGGTCACAGTCCATCAAACCC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCGGGCTCATGGGGTTTaGTGGACTGTGACCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSRAHGV*WTVTQA
Trigger: AGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCGACTGTAGGAAGCTGTaGCAAGTCTGTAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSDCRKL*QVCRSP
Trigger: GGGGCTCCTACAGACTTGGCACAGCTTCCTACAGTC...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACTGTAGGAAGCTGTaGCAAGTCTGTAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCDCRKL*QVCRSP
Trigger: GGGGCTCCTACAGACTTGGCACAGCTTCCTACAGTC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGACTGTAGGAAGCTGTaGCAAGTCTGTAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVDCRKL*QVCRSP
Trigger: GGGGCTCCTACAGACTTGGCACAGCTTCCTACAGTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWSLFTN*PLAMTE
Trigger: TTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACT...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGCAGATCACTTCCTCTTaGAGTTTGTTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVQITSS*SLFTNC
Trigger: GCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTG...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTCTGTGAGGATCCTTTaGTTCTCATGTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWSVRIL*FSCSTW
Trigger: CCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCTGGGTGGCATGTTCTaGTTGGTCTTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEILGGMF*LVFRES
Trigger: TGATTCCCTGAAGACCAAGCAGAACATGCCACCCAG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSQPLTQ*RMELLG
Trigger: TCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCCCCCTACAGAGGCTTaGGTGGTGGTTCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSPPTEA*VVVPVC
Trigger: GCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAGQETY*KSDFPS
Trigger: GCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSGQETY*KSDFPS
Trigger: GCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQASLSAA*SSSDSA
Trigger: TGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSLQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEILQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIDVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSADVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGTTCTACCTGGTCCGTaGAGACATCGACCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFVLPGP*RHRPCV
Trigger: TACACAGGGTCGATGTCTTCACGGACCAGGTAGAAC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHCTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSCTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCCTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGAACAGGGGTTGGGTTaGGAAACTGAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAEQGLG*ETETLH
Trigger: GTGAAGAGTTTCAGTTTCTCAACCCAACCCCTGTTC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGGGCTGAAGAGTGGTaGTTTGGTGGCCCCGATGTA +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSGAEEW*FGGPDV
Trigger: TACATCGGGGCCACCAAATCACCACTCTTCAGCCCC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTTTCCCTTGCTGATATaGGGGGTTGGGAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLFPLLI*GVGREG
Trigger: CCCTTCTCTCCCAACCCCTCATATCAGCAAGGGAAA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGCAGATCACTTCCTCTTaGAGTTTGTTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWQITSS*SLFTNC
Trigger: GCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTG...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGTCTCCTTCTCCTTTTaGTGCAAGACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAVSFSF*CKTWIC
Trigger: GCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGAC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAPVYTL*LHLYCL
Trigger: GAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCAGCTGCTTAAAGAGTaGGGGGACTGCTGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAQLLKE*GDCCRD
Trigger: GTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFRVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHRVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVRVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVLSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWCRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGATTTCACTCCTGGCTaGACTGGTGCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFDFTPG*TGAFGK
Trigger: TTTACCGAAGGCACCAGTTCAGCCAGGAGTGAAATC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGATTTCACTCCTGGCTaGACTGGTGCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVDFTPG*TGAFGK
Trigger: TTTACCGAAGGCACCAGTTCAGCCAGGAGTGAAATC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGATTTCACTCCTGGCTaGACTGGTGCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLDFTPG*TGAFGK
Trigger: TTTACCGAAGGCACCAGTTCAGCCAGGAGTGAAATC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCGATTTCACTCCTGGCTaGACTGGTGCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSDFTPG*TGAFGK
Trigger: TTTACCGAAGGCACCAGTTCAGCCAGGAGTGAAATC...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGTGGATACTGTTTCTTaGTACCTCTTGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVVDTVS*YLLRTN
Trigger: ATTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCAC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEISLFTN*PLAMTE
Trigger: TTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSASLFTN*PLAMTE
Trigger: TTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSARVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSRVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIRVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEISFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSASFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCTGGAACATCTCCTGGTaGCTCGGGCATGTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSWNISW*LGHVAS
Trigger: AGAGGCTACATGCCCGAGGCACCAGGAGATGTTCCA...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSASFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEISFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSSFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRPVYTL*LHLYCL
Trigger: GAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTGGGTGGCATGTTCTaGTTGGTCTTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLLGGMF*LVFRES
Trigger: TGATTCCCTGAAGACCAAGCAGAACATGCCACCCAG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCTGGGTGGCATGTTCTaGTTGGTCTTCAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVLGGMF*LVFRES
Trigger: TGATTCCCTGAAGACCAAGCAGAACATGCCACCCAG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSECGDC*RDFLFP
Trigger: TGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGAGGCTTGTAGAGCTTaGATTTTCTCCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAEACRA*IFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCAGCAGCTGCCTGGGTaGCATGTTCTGCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAQQLPG*HVLLGL
Trigger: AAGACCAAGCAGAACATGCCACCCAGGCAGCTGCTG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCGQETY*KSDFPS
Trigger: GCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVGQETY*KSDFPS
Trigger: GCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCCGTGTTCTCTGAGCTaGCTTAGCTTGAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSPCSLS*LSLKEP
Trigger: AGGTTCCTTCAAGCTAAGCCAGCTCAGAGAACACGG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGAGTGGTCGGGCTCATaGGGTTTGATGGACTGTGAC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAEWSGS*GLMDCD
Trigger: GTCACAGTCCATCAAACCCCATGAGCCCGACCACTC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGAAGGAAGAGCGAGAGTaGTCGGGCTCATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAKEERE*SGSWGL
Trigger: CAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFLQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLLQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTCTACAGAGGCTTGCGTaGTGGTTCCAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCLQRLA*WFQSAK
Trigger: TTTAGCAGACTGGAACCACCACGCAAGCCTCTGTAG...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLDVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGATGTTTCCCCAATCTaGGTGATGCATTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHDVSPI*VMHLRQ
Trigger: CTGCCTCAAATGCATCACTCAGATTGGGGAAACATC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCTTCTTCGATCAAGCTaGCATTATGGGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSLLRSS*HYGICG
Trigger: ACCACAAATCCCATAATGTCAGCTTGATCGAAGAAG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCTGCACAAGACGACTTTaGTATCCTCCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSCTRRL*YPPAAA
Trigger: GGCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCA...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGAACAGGGGTTGGGTTaGGAAACTGAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHEQGLG*ETETLH
Trigger: GTGAAGAGTTTCAGTTTCTCAACCCAACCCCTGTTC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGAACAGGGGTTGGGTTaGGAAACTGAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVEQGLG*ETETLH
Trigger: GTGAAGAGTTTCAGTTTCTCAACCCAACCCCTGTTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGTGGATACTGTTTCTTaGTACCTCTTGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWVDTVS*YLLRTN
Trigger: ATTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCAC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGTCTCCTTCTCCTTTTaGTGCAAGACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLVSFSF*CKTWIC
Trigger: GCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGAC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGTCTCCTTCTCCTTTTaGTGCAAGACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCVSFSF*CKTWIC
Trigger: GCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGAC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLPVYTL*LHLYCL
Trigger: GAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHPVYTL*LHLYCL
Trigger: GAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGAGGCTTGTAGAGCTTaGATTTTCTCCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGREACRA*IFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCAGAGTGGTGATTTGGTaGCCCCGATGTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSRVVIW*PRCSSA
Trigger: GGCAGAACTACATCGGGGCCACCAAATCACCACTCT...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCTAAGTCAAGAACCGTaGTCGGTCTCAGCCACTCAC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQALSQEP*SVSATH
Trigger: GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGAGAGAAGGGGGACGTaGGAATGTAAGGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAERRGT*ECKEER
Trigger: TCGCTCTTCCTTACATTCCCACGTCCCCCTTCTCTC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFQRLAW*FQSAKY
Trigger: ATATTTAGCAGACTGGAACCACCACGCAAGCCTCTG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLQRLAW*FQSAKY
Trigger: ATATTTAGCAGACTGGAACCACCACGCAAGCCTCTG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVQRLAW*FQSAKY
Trigger: ATATTTAGCAGACTGGAACCACCACGCAAGCCTCTG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACCAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHQRLAW*FQSAKY
Trigger: ATATTTAGCAGACTGGAACCACCACGCAAGCCTCTG...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSACRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGG +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSDILEK*LSQQTR
Trigger: CCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFRVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLRVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFSFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCSFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSSFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSSFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHSFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTCCTTCTCCTTTTGCTaGAAGACTTGGATCTGCTCT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCSFSFC*KTWICS
Trigger: AGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTCTGTGAGGATCCTTTaGTTCTCATGTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLSVRIL*FSCSTW
Trigger: CCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTGTGAGGATCCTTTaGTTCTCATGTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHSVRIL*FSCSTW
Trigger: CCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTCTGTGAGGATCCTTTaGTTCTCATGTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSSVRIL*FSCSTW
Trigger: CCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSKECGD*CRDFLF
Trigger: AAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTT...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCCTTCGGTAAACAGCTaGTTAAAGAGTGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAPSVNS*LKSAGT
Trigger: AGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGAGGCTTGTAGAGCTTaGATTTTCTCCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLEACRA*IFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGAGGCTTGTAGAGCTTaGATTTTCTCCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVEACRA*IFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTATCAAGCTGACATTATaGGATTTGTGGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAIKLTL*DLWSLD
Trigger: ATCCAAGGACCACAAATCCCATAATGTCAGCTTGAT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCTTCTTCGATCAAGCTaGCATTATGGGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSLLRSS*HYGICG
Trigger: ACCACAAATCCCATAATGTCAGCTTGATCGAAGAAG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTCTTCTTCGATCAAGCTaGCATTATGGGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFLLRSS*HYGICG
Trigger: ACCACAAATCCCATAATGTCAGCTTGATCGAAGAAG...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGGAGTTCAAATTCTGTaGGGATCCTTTGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHGVQIL*GSFASH
Trigger: ATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGAACAGGGGTTGGGTTaGGAAACTGAAACTCTTCAC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAEQGLG*ETETLH
Trigger: GTGAAGAGTTTCAGTTTCTCAACCCAACCCCTGTTC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGATGGTGACAGGTTTCTaGAGAATGTCCAGGCAGATG +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAMVTGF*RMSRQM
Trigger: CATCTGCCTGGACATTCTGCAGAAACCTGTCACCAT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGTCTCCTTCTCCTTTTaGTGCAAGACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAVSFSF*CKTWIC
Trigger: GCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGAC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTCTCCTTCTCCTTTTaGTGCAAGACTTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSVSFSF*CKTWIC
Trigger: GCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGAC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGATCAAGCTGACATTATaGGATTTGTGGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRIKLTL*DLWSLD
Trigger: ATCCAAGGACCACAAATCCCATAATGTCAGCTTGAT...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGAGATCGTTCAACTGTaGCTCAGTGGAGGCAACATA +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSEIVQL*LSGGNI
Trigger: TATGTTGCCTCCACTGAGCCACAGTTGAACGATCTC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCAGAGGCTTGCGTGGTaGTTCCAGTCTGCTAAATAT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAQRLAW*FQSAKY
Trigger: ATATTTAGCAGACTGGAACCACCACGCAAGCCTCTG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHCRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSCRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFCRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTGCAGAGGGGACATTTaGAAAATCCACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCCRGDI*KIHMMF
Trigger: AAACATCATGTGGATTTTTCAAATGTCCCCTCTGCA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCT +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSSSSRT*CRSSNS
Trigger: AGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGA...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCATTAATTTCCCTTGCTaGTATGAGGGGTTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSINFPC*YEGLGE
Trigger: CTCTCCCAACCCCTCATATCAGCAAGGGAAATTAAT...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQASLFTN*PLAMTE
Trigger: TTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQARVEPD*VLPYGS
Trigger: ACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQASFLLD*TSEACR
Trigger: TCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTCTGTGAGGATCCTTTaGTTCTCATGTTCTACCTGG +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQASVRIL*FSCSTW
Trigger: CCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGAGGCTTGTAGAGCTTaGATTTTCTCCACCAGATTC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAEACRA*IFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCATCAAGCTGACATTATaGGATTTGTGGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLIKLTL*DLWSLD
Trigger: ATCCAAGGACCACAAATCCCATAATGTCAGCTTGAT...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCATCAAGCTGACATTATaGGATTTGTGGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVIKLTL*DLWSLD
Trigger: ATCCAAGGACCACAAATCCCATAATGTCAGCTTGAT...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCTTCTTCGATCAAGCTaGCATTATGGGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQALLRSS*HYGICG
Trigger: ACCACAAATCCCATAATGTCAGCTTGATCGAAGAAG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGTGGATACTGTTTCTTaGTACCTCTTGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHVDTVS*YLLRTN
Trigger: ATTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCAC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGTGGATACTGTTTCTTaGTACCTCTTGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFVDTVS*YLLRTN
Trigger: ATTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCAC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGTGGATACTGTTTCTTaGTACCTCTTGAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: WECKEEREWSGSWGLMDCVDTVS*YLLRTN
Trigger: ATTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCAC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGCAGATCACTTCCTCTTaGAGTTTGTTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAQITSS*SLFTNC
Trigger: GCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTG...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR GCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCAGATCACTTCCTCTTaGAGTTTGTTCACAAACTGC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSQITSS*SLFTNC
Trigger: GCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGATCAAGCTGACATTATaGGATTTGTGGTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAIKLTL*DLWSLD
Trigger: ATCCAAGGACCACAAATCCCATAATGTCAGCTTGAT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR TCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCTTTGAAAAATCCACATaGTGTTTCCCCAATCTGAGT +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSFEKST*CFPNLS
Trigger: ACTCAGATTGGGGAAACATCATGTGGATTTTTCAAA...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CCA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCCTAAATATTTCAGAATaGGGACCTCATTCTATCTAC +
Preference number: 4 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSLNISE*GPHSIY
Trigger: GTAGATAGAATGAGGTCCCCATTCTGAAATATTTAG...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTACCCCCTACAGAGGCTaGCGTGGTGGTTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEITPYRG*RGGSSL
Trigger: CAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGT...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCACCCCCTACAGAGGCTaGCGTGGTGGTTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSTPYRG*RGGSSL
Trigger: CAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGT...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGACCCCCTACAGAGGCTaGCGTGGTGGTTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRTPYRG*RGGSSL
Trigger: CAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGT...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCGTGGTCGGTCTCAGCCACTCACTCAGCGCCACTCTATGCTCCGAAGTCCGTGACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: PWSVSATHSAPLYAPKSVTSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...CACGGACTTCGGAGCATAGAGTGGCGCTGAGTGAGTGGCTGAGACCGACCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTCGGGCTCATGGGGTTaGATGGACTGTGACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVSGSWG*MDCDPG
Trigger: GCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWTSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWCLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSALHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSLHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS GCA 90 bp ACTGGTGCCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCATCAGCGCCACTCTATGCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: TGAFGKQLLKECGDC*RDFLFPSAPLYAPK
Trigger: CTTCGGAGCATAGAGTGGCGCTGATGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGGCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000482981.5
ENST00000486654.5
ENST00000489367.5
CDS-3UTR CAA 90 bp GAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACCCAGGCTGGGCAGATCACTTCCTCTaGCAGTTTGTTCACAAACTG +
Preference number: 5 (lower is better)
Translates to: EEREWSGSWGLMDCDPGWADHFL*QFVHKL
Trigger: CAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGC...CCAGCCTGGGTCACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEIFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRLHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGACCCCCTACAGAGGCTaGCGTGGTGGTTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQATPYRG*RGGSSL
Trigger: CAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS TCA 90 bp GACCAGAAATCTCATCATAAGAGGCCAGGAGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGGCCCGAAACAGGGAGTGGGATGGGG +
Preference number: 5 (lower is better)
Translates to: DQKSHHKRPGDILEK*LSQQTRPETGSGMG
Trigger: CCCCATCCCACTCCCTGTTTCGGGCCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCCTCTTATGATGAGATTTCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS GCA 90 bp GGCCATGACAGAACAACAGGGCTGTTTCAAGACTGTAGGAAGCTGTaGCAAGTCTGTAGGAGCCCCGGAGTCCACTGTGGATACTGTTTC +
Preference number: 5 (lower is better)
Translates to: GHDRTTGLFQDCRKL*QVCRSPGVHCGYCF
Trigger: GAAACAGTATCCACAGTGGACTCCGGGGCTCCTACAGACTTGGCACAGCTTCCTACAGTCTTGAAACAGCCCTGTTGTTCTGTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSTSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSATSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSACLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSCLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVLHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLLHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCTGCACAAGACGACTTaGATATCCTCCAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSLHKTT*ISSSSC
Trigger: GCAGCTGCTGGAGGATATCAAAGTCGTCTTGTGCAG...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS CCA 90 bp CGCTCCTTGACCAGAAATCTCATCATAAGAGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGCAGACGAGGCCCGAAACAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RSLTRNLIIRGQETY*KSDFPSRRGPKQGV
Trigger: CACTCCCTGTTTCGGGCCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCCTCTTATGATGAGATTTCTGGTCAAGGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS-3UTR CAA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS GCA 90 bp AACATCTCCTGGTGCCTCGGGCATGTAGCCTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGAGCTTGGATTTTCTCCACCAGATTC +
Preference number: 5 (lower is better)
Translates to: NISWCLGHVASFLLD*TSEACRAWIFSTRF
Trigger: GAATCTGGTGGAGAAAATCCAAGCTCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTACATGCCCGAGGCACCAGGAGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVTSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSTSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSAFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAVASFL*DCTSEA
Trigger: AGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTAC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHCLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCCLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS CCA 90 bp CCAGGAGCTTTGGCAGAGATGTTTCTGCTTCCAGAGATCGTGGGATaGAGTTTTTCTTACCGTGAAGACATCGACCCTGTGTACACCTTG +
Preference number: 5 (lower is better)
Translates to: PGALAEMFLLPEIVG*SFSYREDIDPVYTL
Trigger: CAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCATCCCACGATCTCTGGAAGCAGAAACATCTCTGCCAAAGCTCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS-3UTR CAA 90 bp AGAAGTGTCTCCATCCACCCCCTACAGAGGCTTGCGTGGTGGTTCCAGTCTGCTTGTGGATACTGTTTCTaGCTACCTCTTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: RSVSIHPLQRLAWWFQSACGYCF*LPLENK
Trigger: TTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCACA...AGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGACACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCTGTGGATACTGTTTCTaGCTACCTCTTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSCGYCF*LPLENK
Trigger: TTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCACA...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGCAGATCACTTCCTCTaGCAGTTTGTTCACAAACTG +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVADHFL*QFVHKL
Trigger: CAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGC...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGCAGATCACTTCCTCTaGCAGTTTGTTCACAAACTG +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLADHFL*QFVHKL
Trigger: CAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTTTGCAGAGGGGACATTaGAAAAATCCACATGATGTT +
Preference number: 5 (lower is better)
Translates to: GTTAKVIRSQAWGGWLEILQRGH*KNPHDV
Trigger: AACATCATGTGGATTTTTCAAATGTCCCCTCTGCAA...AATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAFRNSE*NLIAFF
Trigger: GAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCGACTTGGATCTGCTCTaGAATCTGCCCCTGATAATT +
Preference number: 5 (lower is better)
Translates to: SPLLRPNSTKSRTVVGLSDLDLL*NLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTC...GCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHFCEDP*LLMFYL
Trigger: CAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFFCEDP*LLMFYL
Trigger: CAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCFCEDP*LLMFYL
Trigger: CAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVFCEDP*LLMFYL
Trigger: CAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS GCA 90 bp ATGTTCTACCTGGTCCGTGAAGACATCGACCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTGCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: MFYLVREDIDPVYTL*LHLYCLLLLLLQDL
Trigger: CAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAGGTAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000462071.5
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000481056.5
ENST00000482869.5
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS CCA 90 bp GGATTCCAGGAGCTTTGGCAGAGATGTTTCTGCTTCCAGAGATCGTaGGATGGAGTTTTTCTTACCGTGAAGACATCGACCCTGTGTACA +
Preference number: 5 (lower is better)
Translates to: GFQELWQRCFCFQRS*DGVFLTVKTSTLCT
Trigger: TGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCATCCCACGATCTCTGGAAGCAGAAACATCTCTGCCAAAGCTCCTGGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS-3UTR CAA 90 bp AGTGATAAGAAGTCAAGCGTGGGGCGGGTGGCTGGAGATTGTCTCTTCCCCTCCGTTTCTTGCTACCTCTaGAGAACAAATGGATACTTT +
Preference number: 5 (lower is better)
Translates to: SDKKSSVGRVAGDCLFPSVSCYL*RTNGYF
Trigger: AAAGTATCCATTTGTTCTCAAGAGGTAGCAAGAAAC...GGAGGGGAAGAGACAATCTCCAGCCACCCGCCCCACGCTTGACTTCTTATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357569.5
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGACTTCCTCTTGCAGTTaGTTCACAAACTGCCCACTG +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQATSSCS*FTNCPL
Trigger: CAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGT...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGGGGCGGTTGCAGAGGGGACATTaGAAAAATCCACATGATGTT +
Preference number: 5 (lower is better)
Translates to: FSTRRHHSQSDKKSSVGRLQRGH*KNPHDV
Trigger: AACATCATGTGGATTTTTCAAATGTCCCCTCTGCAA...CCGCCCCACGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: SFDPIPLSQEPWSVSATHFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...GTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSCLLLL*LQDLDL
Trigger: CAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACA...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS TCA 90 bp GATGTTTCTGCTTCCAGAGATCGTGGGATGGAGTTTTTCTTACCGTaGAGACATCGACCCTGTGTACACCTTGTGCCTTCACTTGTACTG +
Preference number: 5 (lower is better)
Translates to: DVSASRDRGMEFFLP*RHRPCVHLVPSLVL
Trigger: CAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCATCCCACGATCTCTGGAAGCAGAAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS GCA 90 bp GGTCAGTGTAATAGGGGATTCCAGGAGCTTTGGCAGAGATGTTTCTaGTTCCAGAGATCGTGGGATGGAGTTTTTCTTACCGTGAAGACA +
Preference number: 5 (lower is better)
Translates to: GQCNRGFQELWQRCF*FQRSWDGVFLTVKT
Trigger: TGTCTTCACGGTAAGAAAAACTCCATCCCACGATCTCTGGAAGCAGAAACATCTCTGCCAAAGCTCCTGGAATCCCCTATTACACTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS-3UTR CAA 90 bp CCCTCCCATTCTCCACTCCTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCTGTGGATACTGTTTCTaGCTACCTCTTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: PSHSPLLRPNSTKSRTVVCGYCF*LPLENK
Trigger: TTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCACA...GACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAGGAGTGGAGAATGGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGGCAGATCACTTCCTCTaGCAGTTTGTTCACAAACTG +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAADHFL*QFVHKL
Trigger: CAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGC...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTTTGCAGAGGGGACATTaGAAAAATCCACATGATGTT +
Preference number: 5 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFLQRGH*KNPHDV
Trigger: AACATCATGTGGATTTTTCAAATGTCCCCTCTGCAA...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCTTGCAGAGGGGACATTaGAAAAATCCACATGATGTT +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLLQRGH*KNPHDV
Trigger: AACATCATGTGGATTTTTCAAATGTCCCCTCTGCAA...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAFCEDP*LLMFYL
Trigger: CAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS GCA 90 bp TGGAGTTTTTCTTACCGTGAAGACATCGACCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTGCAAGACTTG +
Preference number: 5 (lower is better)
Translates to: WSFSYREDIDPVYTL*LHLYCLLLLLLQDL
Trigger: CAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS-3UTR CAA 90 bp CCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTGCAGGGACTTCCTTTGTTTCTTGCTACCTCTaGAGAACAAATGGATACTTT +
Preference number: 5 (lower is better)
Translates to: PSVNSCLKSAGTAAGTSFVSCYL*RTNGYF
Trigger: AAAGTATCCATTTGTTCTCAAGAGGTAGCAAGAAAC...AAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357569.5
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp CTTCGACCCAATTCCACTAAGTCAAGAACCGTGGTCGGTCTCAGCCACTCACTCGTTTCTTGCTACCTCTaGAGAACAAATGGATACTTT +
Preference number: 5 (lower is better)
Translates to: LRPNSTKSRTVVGLSHSLVSCYL*RTNGYF
Trigger: AAAGTATCCATTTGTTCTCAAGAGGTAGCAAGAAAC...GAGTGAGTGGCTGAGACCGACCACGGTTCTTGACTTAGTGGAATTGGGTCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357569.5
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp TGGGAATGTAAGGAAGAGCGAGAGTGGTCGGGCTCATGGGGTTTGATGGACTGTGTTTCTTGCTACCTCTaGAGAACAAATGGATACTTT +
Preference number: 5 (lower is better)
Translates to: WECKEEREWSGSWGLMDCVSCYL*RTNGYF
Trigger: AAAGTATCCATTTGTTCTCAAGAGGTAGCAAGAAAC...ACAGTCCATCAAACCCCATGAGCCCGACCACTCTCGCTCTTCCTTACATTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357569.5
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAA +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQAFLTEV*QRGHLK
Trigger: TTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTGTGGATACTGTTTCTaGCTACCTCTTGAGAACAAA +
Preference number: 5 (lower is better)
Translates to: DFLFPLGGTTAKVIRSQACGYCF*LPLENK
Trigger: TTTGTTCTCAAGAGGTAGCAAGAAACAGTATCCACA...CGCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS-3UTR CAA 90 bp GGACTTCCTTTTTCCACTAGGCGGCACCACAGCCAAAGTGATAAGAAGTCAAGCGTTTCTTGCTACCTCTaGAGAACAAATGGATACTTT +
Preference number: 5 (lower is better)
Translates to: GLPFSTRRHHSQSDKKSSVSCYL*RTNGYF
Trigger: AAAGTATCCATTTGTTCTCAAGAGGTAGCAAGAAAC...GCTTGACTTCTTATCACTTTGGCTGTGGTGCCGCCTAGTGGAAAAAGGAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357569.5
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
CDS GCA 90 bp TTGAGCAAAGAACTCACTATCACACAGCAAGGCACTAATTTGAAATaGCTGGGAGAAGTAGAAGCTGCATTTGACTCTCATATTCTTATT +
Preference number: 5 (lower is better)
Translates to: LSKELTITQQGTNLK*LGEVEAAFDSHILI
Trigger: AATAAGAATATGAGAGTCAAATGCAGCTTCTACTTCTCCCAGGCATTTCAAATTAGTGCCTTGCTGTGTGATAGTGAGTTCTTTGCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000476390.1
ENST00000482298.1
ENST00000482981.5
ENST00000484583.1
ENST00000486654.5
ENST00000489367.5
ENST00000492282.1
ENST00000493823.1
ENST00000494522.1
ENST00000496472.1
CDS CCA 72 bp CAGCGCGGGTTTTCCGTGCCCCACCTTGTCTGCCGGTaGAGACTGAGCAGTCAGCCCGCTGTAATAGCGAGG +
Preference number: 6 (lower is better)
Translates to: QRGFSVPHLVCR*RLSSQPAVIAR
Trigger: CCTCGCTATTACAGCGGGCTGACTGCTCAGTCTCCACCGGCAGACAAGGTGGGGCACGGAAAACCCGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS CCA 72 bp GCCCGGATCGCTGTCAGCCACTCACTCAGTGCCGCATaGAGCTCCTCGGACAGCGCAACGTCAAATGTCTTC +
Preference number: 6 (lower is better)
Translates to: ARIAVSHSLSAA*SSSDSATSNVF
Trigger: GAAGACATTTGACGTTGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTGACAGCGATCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS GCA 72 bp AAACCAAGCCCGGATCGCTGTCAGCCACTCACTCAGTaGCGCATGGAGCTCCTCGGACAGCGCAACGTCAAA +
Preference number: 6 (lower is better)
Translates to: KPSPDRCQPLTQ*RMELLGQRNVK
Trigger: TTTGACGTTGCGCTGTCCGAGGAGCTCCATGCGGCACTGAGTGAGTGGCTGACAGCGATCCGGGCTTGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS GCA 72 bp GCCTTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTaGTGCAGGGACTTCCTTTTTCCATCAGCGCCACTC +
Preference number: 6 (lower is better)
Translates to: AFGKQLLKECGD*CRDFLFPSAPL
Trigger: GAGTGGCGCTGATGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000482981.5
ENST00000486654.5
ENST00000489367.5
CDS GCA 72 bp AGAACAACAGGGCTGTTTCAAGACTGTAGGAAGCTGTaGCAAGTCTGTAGGAGCCCCGGAGTCCACTGTGGA +
Preference number: 6 (lower is better)
Translates to: RTTGLFQDCRKL*QVCRSPGVHCG
Trigger: TCCACAGTGGACTCCGGGGCTCCTACAGACTTGGCACAGCTTCCTACAGTCTTGAAACAGCCCTGTTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS GCA 72 bp TGGTGCCTCGGGCATGTAGCCTCTTTCCTTTTGGACTaGACCTCAGAGGCTTGTAGAGCTTGGATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: WCLGHVASFLLD*TSEACRAWIFS
Trigger: GGAGAAAATCCAAGCTCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTACATGCCCGAGGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS CAA 72 bp ATCTCCTGGTGCCTCGGGCATGTAGCCTCTTTCCTTTaGGACTGCACCTCAGAGGCTTGTAGAGCTTGGATT +
Preference number: 6 (lower is better)
Translates to: ISWCLGHVASFL*DCTSEACRAWI
Trigger: AATCCAAGCTCTACAAGCCTCTGAGGTGCAGTCCAAAAGGAAAGAGGCTACATGCCCGAGGCACCAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS CAA 90 bp CTGGTCCGTGAAGACATCGACCCTGTGTACACCTTGTGCCTTCACTaGTACTGTCTCCTTCTCCTTTTGCTGCAAGACTTGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: LVREDIDPVYTLCLH*YCLLLLLLQDLDLL
Trigger: GAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000462071.5
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000481056.5
ENST00000482869.5
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS CAA 90 bp CCTGTGTACACCTTGTGCCTTCACTTGTACTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTGCTCTTGAATCTGCCCCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: PVYTLCLHLYCLLLL*LQDLDLLLNLPLRL
Trigger: GAGCCTCAGGGGCAGATTCAAGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000462071.5
ENST00000481056.5
ENST00000482869.5
ENST00000485864.5
ENST00000492111.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS TCA 72 bp TCTCATCATAAGAGGCCAGGAGACATACTGGAAAAGTaGCTTTCCCAGCAGACGAGGCCCGAAACAGGGAGT +
Preference number: 6 (lower is better)
Translates to: SHHKRPGDILEK*LSQQTRPETGS
Trigger: ACTCCCTGTTTCGGGCCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCCTCTTATGATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS GCA 72 bp GGGCAGATCACTTCCTCTTGCAGTTTGTTCACAAACTaGCCACTGGCCATGACAGAACAACAGGGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: GQITSSCSLFTN*PLAMTEQQGCF
Trigger: GAAACAGCCCTGTTGTTCTGTCATGGCCAGTGGGCAGTTTGTGAACAAACTGCAAGAGGAAGTGATCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS GCA 72 bp CTCCACCAGATTCCGCAACAGCGAGTTGAACCTGATTaGGTTCTTCCTTACGGAAGTTTTGCAGAGGGGACA +
Preference number: 6 (lower is better)
Translates to: LHQIPQQRVEPD*VLPYGSFAEGT
Trigger: TGTCCCCTCTGCAAAACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAATCTGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS GCA 72 bp CTGGTCCGTGAAGACATCGACCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: LVREDIDPVYTL*LHLYCLLLLLL
Trigger: CAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000462071.5
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000481056.5
ENST00000482869.5
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS GCA 72 bp TTCGGTAAACAGCTGCTTAAAGAGTGCGGGGACTGCTaGAGGGACTTCCTTTTTCCATCAGCGCCACTCTAT +
Preference number: 6 (lower is better)
Translates to: FGKQLLKECGDC*RDFLFPSAPLY
Trigger: ATAGAGTGGCGCTGATGGAAAAAGGAAGTCCCTGCAGCAGTCCCCGCACTCTTTAAGCAGCTGTTTACCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000482981.5
ENST00000486654.5
ENST00000489367.5
CDS CAA 90 bp CTCATGTTCTACCTGGTCCGTGAAGACATCGACCCTGTGTACACCTaGTGCCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: LMFYLVREDIDPVYT*CLHLYCLLLLLLQD
Trigger: GTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGACCAGGTAGAACATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000462071.5
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000481056.5
ENST00000482869.5
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS CAA 90 bp GAATCTGCCCCTGAGGCTCAGAGAGGTAAAGTGATTCCTTGCAGGTaGTACAGTAAACTCACAAGACTGGGCTTGAGCCCAAACCTTCTG +
Preference number: 6 (lower is better)
Translates to: ESAPEAQRGKVIPCR*YSKLTRLGLSPNLL
Trigger: CAGAAGGTTTGGGCTCAAGCCCAGTCTTGTGAGTTTACTGTACAACCTGCAAGGAATCACTTTACCTCTCTGAGCCTCAGGGGCAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000462071.5
ENST00000481056.5
ENST00000482869.5
ENST00000485864.5
ENST00000492111.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS TCA 72 bp GCTTCCAGAGATCGTGGGATGGAGTTTTTCTTACCGTaGAGACATCGACCCTGTGTACACCTTGTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: ASRDRGMEFFLP*RHRPCVHLVPS
Trigger: TGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCATCCCACGATCTCTGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS GCA 72 bp TCTGCCCCTGAGGCTCAGAGAGGTAAAGTGATTCCTTaGAGGTTGTACAGTAAACTCACAAGACTGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SAPEAQRGKVIP*RLYSKLTRLGL
Trigger: CAAGCCCAGTCTTGTGAGTTTACTGTACAACCTGCAAGGAATCACTTTACCTCTCTGAGCCTCAGGGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000462071.5
ENST00000481056.5
ENST00000482869.5
ENST00000485864.5
ENST00000492111.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS CAA 90 bp TCTTACCGTGAAGACATCGACCCTGTGTACACCTTGTGCCTTCACTaGTACTGTCTCCTTCTCCTTTTGCTGCAAGACTTGGATCTGCTC +
Preference number: 6 (lower is better)
Translates to: SYREDIDPVYTLCLH*YCLLLLLLQDLDLL
Trigger: GAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS GCA 72 bp TCTTACCGTGAAGACATCGACCCTGTGTACACCTTGTaGCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: SYREDIDPVYTL*LHLYCLLLLLL
Trigger: CAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS CCA 72 bp ACCAGAAATCTCATCATAAGAGGCCAGGAGACATACTaGAAAAGTGACTTTCCCAGCAGACGAGGCCCGAAA +
Preference number: 6 (lower is better)
Translates to: TRNLIIRGQETY*KSDFPSRRGPK
Trigger: TTTCGGGCCTCGTCTGCTGGGAAAGTCACTTTTCCAGTATGTCTCCTGGCCTCTTATGATGAGATTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000470813.5
ENST00000471539.5
ENST00000471695.1
ENST00000474549.5
ENST00000474960.5
ENST00000475301.5
ENST00000475332.5
ENST00000475526.5
ENST00000476528.5
ENST00000477579.5
ENST00000482344.5
ENST00000482615.5
ENST00000482981.5
ENST00000484570.5
ENST00000486092.5
ENST00000486654.5
ENST00000488184.5
ENST00000489367.5
CDS CAA 72 bp ACCTTGTGCCTTCACTTGTACTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTGCTCTTGAATCTGCCC +
Preference number: 6 (lower is better)
Translates to: TLCLHLYCLLLL*LQDLDLLLNLP
Trigger: GGGCAGATTCAAGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 31 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000460861.1
ENST00000462071.5
ENST00000468297.1
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000477855.1
ENST00000481056.5
ENST00000482869.5
ENST00000484570.5
ENST00000485342.1
ENST00000485826.1
ENST00000485864.5
ENST00000486092.5
ENST00000486990.1
ENST00000488184.5
ENST00000489466.1
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493404.1
ENST00000493942.5
ENST00000497819.5
CDS CAA 90 bp GGATGGAGTTTTTCTTACCGTGAAGACATCGACCCTGTGTACACCTaGTGCCTTCACTTGTACTGTCTCCTTCTCCTTTTGCTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: GWSFSYREDIDPVYT*CLHLYCLLLLLLQD
Trigger: GTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGGGTCGATGTCTTCACGGTAAGAAAAACTCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS CAA 90 bp CCTGTGTACACCTTGTGCCTTCACTTGTACTGTCTCCTTCTCCTTTaGCTGCAAGACTTGGATCTGCTCTTGAATCTGCCCCTGATAATT +
Preference number: 6 (lower is better)
Translates to: PVYTLCLHLYCLLLL*LQDLDLLLNLPLII
Trigger: AATTATCAGGGGCAGATTCAAGAGCAGATCCAAGTCTTGCAGCAAAAGGAGAAGGAGACAGTACAAGTGAAGGCACAAGGTGTACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000460861.1
ENST00000468297.1
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000477855.1
ENST00000484570.5
ENST00000485342.1
ENST00000485826.1
ENST00000486092.5
ENST00000486990.1
ENST00000488184.5
ENST00000489466.1
ENST00000492151.5
ENST00000493404.1
CDS GCA 72 bp AATAGGGGATTCCAGGAGCTTTGGCAGAGATGTTTCTaGTTCCAGAGATCGTGGGATGGAGTTTTTCTTACC +
Preference number: 6 (lower is better)
Translates to: NRGFQELWQRCF*FQRSWDGVFLT
Trigger: GGTAAGAAAAACTCCATCCCACGATCTCTGGAAGCAGAAACATCTCTGCCAAAGCTCCTGGAATCCCCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000460861.1
ENST00000468297.1
ENST00000477855.1
ENST00000485342.1
ENST00000485826.1
ENST00000486990.1
ENST00000489466.1
ENST00000493404.1
CDS CAA 72 bp GCTTGGATTTTCTCCACCAGATTCCGCAACAGCGAGTaGAACCTGATTGCGTTCTTCCTTACGGAAGTTTTG +
Preference number: 6 (lower is better)
Translates to: AWIFSTRFRNSE*NLIAFFLTEVL
Trigger: CAAAACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTCGCTGTTGCGGAATCTGGTGGAGAAAATCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
ENST00000476528.5
ENST00000477579.5
ENST00000484570.5
ENST00000486092.5
ENST00000488184.5
ENST00000492151.5
CDS TCA 72 bp CGTGATAGCAGGAAATTCTTCTCCTCCTCTAGGACTTaGTGCAGGAGTTCAAATTCTGTGAGGATCCTTTGC +
Preference number: 6 (lower is better)
Translates to: RDSRKFFSSSRT*CRSSNSVRILC
Trigger: GCAAAGGATCCTCACAGAATTTGAACTCCTGCATCAAGTCCTAGAGGAGGAGAAGAATTTCCTGCTATCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 31 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000460146.1
ENST00000461197.1
ENST00000461978.1
ENST00000462071.5
ENST00000468315.1
ENST00000469791.5
ENST00000473446.1
ENST00000474867.1
ENST00000476528.5
ENST00000477579.5
ENST00000480808.1
ENST00000481056.5
ENST00000482869.5
ENST00000483556.1
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS TCA 72 bp AAAGAATGGGATGAAATGGTGAGAGTCCAGAGGGGTTaGGCAAAGAACTCACTATCACACAGCAAGGCACTA +
Preference number: 6 (lower is better)
Translates to: KEWDEMVRVQRG*AKNSLSHSKAL
Trigger: TAGTGCCTTGCTGTGTGATAGTGAGTTCTTTGCTCAACCCCTCTGGACTCTCACCATTTCATCCCATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000476390.1
ENST00000482298.1
ENST00000482981.5
ENST00000484583.1
ENST00000486654.5
ENST00000489367.5
ENST00000492282.1
ENST00000493823.1
ENST00000494522.1
ENST00000496472.1
CDS CAA 72 bp GACTTGATGCAGGAGTTCAAATTCTGTGAGGATCCTTaGCTTCTCATGTTCTACCTGGTCCGTGAAGACATC +
Preference number: 6 (lower is better)
Translates to: DLMQEFKFCEDP*LLMFYLVREDI
Trigger: GATGTCTTCACGGACCAGGTAGAACATGAGAAGCAAAGGATCCTCACAGAATTTGAACTCCTGCATCAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 31 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000460146.1
ENST00000461197.1
ENST00000461978.1
ENST00000462071.5
ENST00000468315.1
ENST00000469791.5
ENST00000473446.1
ENST00000474867.1
ENST00000476528.5
ENST00000477579.5
ENST00000480808.1
ENST00000481056.5
ENST00000482869.5
ENST00000483556.1
ENST00000484570.5
ENST00000485864.5
ENST00000486092.5
ENST00000488184.5
ENST00000492111.5
ENST00000492151.5
ENST00000492228.5
ENST00000493942.5
ENST00000497819.5
CDS GCA 72 bp GAACTCACTATCACACAGCAAGGCACTAATTTGAAATaGCTGGGAGAAGTAGAAGCTGCATTTGACTCTCAT +
Preference number: 6 (lower is better)
Translates to: ELTITQQGTNLK*LGEVEAAFDSH
Trigger: ATGAGAGTCAAATGCAGCTTCTACTTCTCCCAGGCATTTCAAATTAGTGCCTTGCTGTGTGATAGTGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000470813.5
ENST00000471695.1
ENST00000474960.5
ENST00000475526.5
ENST00000476390.1
ENST00000482298.1
ENST00000482981.5
ENST00000484583.1
ENST00000486654.5
ENST00000489367.5
ENST00000492282.1
ENST00000493823.1
ENST00000494522.1
ENST00000496472.1
CDS CAA 72 bp GAGTTGAACCTGATTGCGTTCTTCCTTACGGAAGTTTaGCAGAGGGGACATTTGAAAAATCCACATGATGTT +
Preference number: 6 (lower is better)
Translates to: ELNLIAFFLTEV*QRGHLKNPHDV
Trigger: AACATCATGTGGATTTTTCAAATGTCCCCTCTGCAAAACTTCCGTAAGGAAGAACGCAATCAGGTTCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000357569.5
ENST00000376734.4
ENST00000422484.1
ENST00000433864.2
ENST00000445679.2
ENST00000449412.2
ENST00000453266.2
ENST00000455349.2
ENST00000469791.5
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