RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000110171

Ensembl transcript IDs: ENST00000345851.8, ENST00000359518.7, ENST00000525074.5, ENST00000526845.1, ENST00000527237.1, ENST00000528227.5, ENST00000528932.1, ENST00000529058.1, ENST00000529529.1, ENST00000530724.1, ENST00000532542.1, ENST00000533064.1, ENST00000533309.5, ENST00000536344.5, ENST00000639856.1

Found 811 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGAGGGCACCGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCCCAGCCAGACCCTCTTGTCCAATCA +
Preference number: 1 (lower is better)
Translates to: GRAPGAPMPTAHIQC*QVWPTSQPDPLVQS
Trigger: TGATTGGACAAGAGGGTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR GCA 90 bp AGAGGGAGGGCACCGGGTGCACCCATGCCCACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACCTCCCAGCCAGACCCTCTTGTCCAA +
Preference number: 1 (lower is better)
Translates to: RGRAPGAPMPTAHIQ*CQVWPTSQPDPLVQ
Trigger: TTGGACAAGAGGGTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR CCA 90 bp CCGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGT +
Preference number: 1 (lower is better)
Translates to: PGAPMPTAHIQCCQV*PTSQPDPLVQSPQC
Trigger: ACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR GCA 90 bp ACTGACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCAA +
Preference number: 1 (lower is better)
Translates to: TDRGGEVCKKGRVKL*THPWDHSPGSPSHQ
Trigger: TTGGTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR CCA 90 bp GGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCACCCAGTCACCAAAGCAAGAACCGA +
Preference number: 1 (lower is better)
Translates to: GEVCKKGRVKLCTHP*DHSPGSPSHQSKNR
Trigger: TCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAGGGAGGGCACCGGGTaGACCCATGCCCACAGCCCA +
Preference number: 2 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSREGTG*THAHSP
Trigger: TGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQAHIQC*QVWPTS
Trigger: GGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR CAA 90 bp ACATTCAGTGCTGCCAGGTCTGGCCCACCTCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TFSAARSGPPPSQTL*SNHPNVCPSTSQAG
Trigger: CCCTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSAHIQC*QVWPTS
Trigger: GGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGGGAGGGCACCGGGTaGACCCATGCCCACAGCCCA +
Preference number: 2 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRREGTG*THAHSP
Trigger: TGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 2 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 2 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCACCGGGTGCACCCATaGCCACAGCCCACATTCAGT +
Preference number: 2 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPHRVHP*PQPTFS
Trigger: ACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCACCGGGTGCACCCATaGCCACAGCCCACATTCAGT +
Preference number: 2 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWHRVHP*PQPTFS
Trigger: ACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 2 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCA +
Preference number: 2 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQLCTHP*DHSPGS
Trigger: TGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCACCGGGTGCACCCATaGCCACAGCCCACATTCAGT +
Preference number: 2 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHRVHP*PQPTFS
Trigger: ACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWAHIQC*QVWPTS
Trigger: GGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR GCA 72 bp GTGGGGGTAGGAGAGGGAGGGCACCGGGTGCACCCATaGCCACAGCCCACATTCAGTGCTGCCAGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: VGVGEGGHRVHP*PQPTFSAARSG
Trigger: GCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCTCTCCTACCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR GCA 72 bp GGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCACAGTCCAGGCTCACCC +
Preference number: 3 (lower is better)
Translates to: GGEVCKKGRVKL*THPWDHSPGSP
Trigger: GGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTC +
Preference number: 3 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPSQTL*SNHPNV
Trigger: GACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
3UTR CCA 72 bp TGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCACCCAGTCACCAAAGC +
Preference number: 3 (lower is better)
Translates to: CKKGRVKLCTHP*DHSPGSPSHQS
Trigger: GCTTTGGTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPAFWRT*LPGPPG
Trigger: CCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTCTGGCGCACATGGCTaGCGGGGCCGCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPSGAHG*RGRQGT
Trigger: AGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGTGGGGCGCTGCAGCTaGCCAGGTGAGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPVGRCS*PGERPR
Trigger: CCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCAC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCGGATCTCCGCCAGCTaGCTCCGGCTCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRISAS*LRLREG
Trigger: CCCTTCCCGGAGCCGGAGGCAGCTGGCGGAGATCCG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGGTCCTCCGGGTCGTaGGCCCCATCAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGSSGS*APSGAC
Trigger: GCAGGCACCTGATGGGGCCCACGACCCGGAGGACCC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGGGCCAGGGCCTCTaGCTTGCGCTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLGQGL*LALLQL
Trigger: CAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGGGCTGCCGCGCACTaGCTGTCCGTAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGAAAH*LSVEQH
Trigger: GTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTATCGTCCGGGGAAGGTaGCAGGTCCCCCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPIVRGR*QVPRTQ
Trigger: CTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGAT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGCCGCCAGGGGACTTaGCACGGCGCTTCACATCGT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGRQGT*HGASHR
Trigger: ACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGAAGGGCCCGCGGCGCTaGTACTGCTGCCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQKGPRR*YCCQRP
Trigger: CGGGCGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGTGCCATGCTCACGATaGTCCCCGGCGCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPVPCSR*SPARHS
Trigger: TGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCAC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACTACACTGAGGGGGTaGGGGTCCTCCGGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTTLRG*GSSGSW
Trigger: CCACGACCCGGAGGACCCCCACCCCCTCAGTGTAGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQAFWRT*LPGPPG
Trigger: CCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTACGCACTGCCTTCTaGCGCACATGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLRTAF*RTWLPG
Trigger: CCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCCTGCAGCTGCTGGCTaGTGCCCCCGACTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPPAAAG*CPRLRQ
Trigger: TTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGCCGATGTGTTCCTaGCCCTGGCGCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLPMCS*PWRSVS
Trigger: GGACACACTGCGCCAGGGTCAGGAACACATCGGCAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTCCTGTGGGGGCATTaGACTGCCCATTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLLWGH*TAHCPR
Trigger: GCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAAGGGCCCGCGGCGCTaGTACTGCTGCCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSKGPRR*YCCQRP
Trigger: CGGGCGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTAGTGCCGAGACGCCCTaGTCTGGGAGGATGGACGTC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPSAETP*SGRMDV
Trigger: GACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCCTGCTTGCGCTGCTaGAGTGCTTGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPACLRC*SACSRS
Trigger: GGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCTGGGCCTACGCACTaGCTTCTGGCGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPAGPTH*LLAHMA
Trigger: AGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGTGGGGCGCTGCAGCTaGCCAGGTGAGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQVGRCS*PGERPR
Trigger: CCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCAC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTCTCCTGCGGACGCTaGCTCCTTGGTGCTGCTAGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLSCGR*LLGAAR
Trigger: CCTAGCAGCACCAAGGAGGCAGCGTCCGCAGGAGAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCACACCAGCCTCTCCTaGGGACGCTGCCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPHTSLS*GRCLLG
Trigger: ACCAAGGAGGCAGCGTCCGCAGGAGAGGCTGGTGTG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCATGGCGCCCACAGATaGCTCCCGCCACTCACACCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPHGAHR*LPPLTP
Trigger: TGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGTGAGCGAGGCAGGCTaGCCCACTAGCGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQVSEAG*PTSAWR
Trigger: GCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCAC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSAFWRT*LPGPPG
Trigger: CCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGAAGGGCCCGCGGCGCTaGTACTGCTGCCAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWKGPRR*YCCQRP
Trigger: CGGGCGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCCCCATCAGGTGCCTaGTGCATTGCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPAPSGA*CIASMR
Trigger: CCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCCTCGAGCTGGCGCTaGAGGGCCGCCTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHASSWR*RAALCC
Trigger: GCAGCACAAGGCGGCCCTGCAGCGCCAGCTCGAGGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRACLR*CSACSR
Trigger: CCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCGGGCCGGTGATCTCTaGACGCAGCTCAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQRAGDL*TQLSAA
Trigger: GGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCAGCTCGCCTTCCGTaGGCGCTGTGTACACTAGCT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPAARLP*ALCTLA
Trigger: AGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCACGCGGAAGGGGCTaGCGCGCACTGGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHARGRG*RALAVR
Trigger: ACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGCACGCGGAAGGGGCTaGCGCGCACTGGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQARGRG*RALAVR
Trigger: ACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTCTGGCGCACATGGCTaGCGGGGCCGCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSGAHG*RGRQGT
Trigger: AGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCCATCCGAGGTCAGTaGCAGGCCCTGTGGACCATA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPAIRGQ*QALWTI
Trigger: TATGGTCCACAGGGCCTGGCACTGACCTCGGATGGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCACCGGGTGCACCCATaGCCACAGCCCACATTCAGT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPHRVHP*PQPTFS
Trigger: ACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGGGTCCTCCGGGTCGTaGGCCCCATCAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQGSSGS*APSGAC
Trigger: GCAGGCACCTGATGGGGCCCACGACCCGGAGGACCC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSWPTSA*RRPSPV
Trigger: CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRLCCT*SWAYAL
Trigger: CAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTGCCGTCCGGGCCGGTaGTCTCTGCACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHCRPGR*SLHAAQ
Trigger: CTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTGCCGTCCGGGCCGGTaGTCTCTGCACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSCRPGR*SLHAAQ
Trigger: CTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCTCCCTTGGGGCCCATaGGGCGGCCAGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQLPWGP*GGQLQS
Trigger: AGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGTGCCATGCTCACGATaGTCCCCGGCGCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQVPCSR*SPARHS
Trigger: TGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCAC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCTGGGCCAGGGCCTCTaGCTTGCGCTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHLGQGL*LALLQL
Trigger: CAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCAGCTCAGCGCTaGCTGTGCGCACCAACCGCC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSHAAQR*LCAPTA
Trigger: GGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCACGCAGCTCAGCGCTaGCTGTGCGCACCAACCGCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHHAAQR*LCAPTA
Trigger: GGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGGGCCGGTGATCTCTaGACGCAGCTCAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRAGDL*TQLSAA
Trigger: GGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCGGGCCGGTGATCTCTaGACGCAGCTCAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRAGDL*TQLSAA
Trigger: GGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTCTGGCGCACATGGCTaGCGGGGCCGCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKSGAHG*RGRQGT
Trigger: AGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLVVAV*YHDAAA
Trigger: AGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGTGGGGCGCTGCAGCTaGCCAGGTGAGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPVGRCS*PGERPR
Trigger: CCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCAC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGTGGGGCGCTGCAGCTaGCCAGGTGAGCGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKVGRCS*PGERPR
Trigger: CCGAGGACGCTCACCTGGGCAGCTGCAGCGCCCCAC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGAGCCTCTCCCTGGGGTaGAGCCTGCCCCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQSLSLG*SLPLQP
Trigger: AGGTTGGAGGGGCAGGCTGCACCCCAGGGAGAGGCT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCTGTCTGGGCCGCCTaGCTCCTGGAGGCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPVWAA*LLEAPF
Trigger: AAAGGGCGCCTCCAGGAGGCAGGCGGCCCAGACAGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGGGTCCTCCGGGTCGTaGGCCCCATCAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKGSSGS*APSGAC
Trigger: GCAGGCACCTGATGGGGCCCACGACCCGGAGGACCC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWWPTSA*RRPSPV
Trigger: CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCA...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPWPTSA*RRPSPV
Trigger: CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGTGAGCGAGGCAGGCTaGCCCACTAGCGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPVSEAG*PTSAWR
Trigger: GCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCAC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGTGAGCGAGGCAGGCTaGCCCACTAGCGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKVSEAG*PTSAWR
Trigger: GCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCAC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGTGAGCGAGGCAGGCTaGCCCACTAGCGCCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWVSEAG*PTSAWR
Trigger: GCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCAC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGGGGCTGCCGCGCACTaGCTGTCCGTAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQGAAAH*LSVEQH
Trigger: GTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTGGGGCCCTGCAAAGTaGCGGTCAGTGGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSWGPAK*RSVAPR
Trigger: CCGTGGGGCCACTGACCGCCACTTTGCAGGGCCCCA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCTCTGGGAGCCTGTCTaGGCCGCCTGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSLWEPV*AACLLE
Trigger: CTCCAGGAGGCAGGCGGCCCAGACAGGCTCCCAGAG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCCTCGAACGCTGCACTaGTCTGGGCCAGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQPRTLH*SGPGPL
Trigger: CAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGCCGCCAGGGGACTTaGCACGGCGCTTCACATCGT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGRQGT*HGASHR
Trigger: ACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCTCCCTTGGGGCCCATaGGGCGGCCAGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQLPWGP*GGQLQS
Trigger: AGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGQSSD*GHSEGP
Trigger: GGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGTGCCATGCTCACGATaGTCCCCGGCGCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSVPCSR*SPARHS
Trigger: TGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCAC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGCCTCGAGCTGGCGCTaGAGGGCCGCCTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRASSWR*RAALCC
Trigger: GCAGCACAAGGCGGCCCTGCAGCGCCAGCTCGAGGC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCTGGGCCAGGGCCTCTaGCTTGCGCTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWLGQGL*LALLQL
Trigger: CAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGGGCCAGGGCCTCTaGCTTGCGCTCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKLGQGL*LALLQL
Trigger: CAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCCTGCTTGCGCTGCTaGAGTGCTTGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQACLRC*SACSRS
Trigger: GGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGGCCTGTGCCGCCAATaGAGCCAGCCGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSGLCRQ*SQPLSH
Trigger: ATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCTCAGCGCTGCCTGTaGGCACCAACCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAQRCL*APTARP
Trigger: AGGACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCACGATGCGGCCGCTaGTGGCTGCGGACACACCTT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPRCGR*WLRTHL
Trigger: AAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCCACGATGCGGCCGCTaGTGGCTGCGGACACACCTT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQPRCGR*WLRTHL
Trigger: AAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGTCTGCTACCACGATaGGGCCGCTGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSCLLPR*GRCWLR
Trigger: CCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTGTCGAATACCTGGATaGGGCTGTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPCRIPG*GCCPSQ
Trigger: CTGACTGGGGCAACAGCCGCATCCAGGTATTCGACA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGAGGGAGGGCACCGGGTaGACCCATGCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWREGTG*THAHSP
Trigger: TGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCAACCATCTGTCCCTaGAGGTTTGCAGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPATICP*RFAAQD
Trigger: ATCCTGGGCTGCAAACCTGCAGGGACAGATGGTTGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGCAAGGAAGAACCTTaGGGCACTGGTACCGATCCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGKEEP*GTGTDP
Trigger: TGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCGAGACGCCCTGCTCTaGGAGGATGGACGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRDALL*EDGRLP
Trigger: CGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTACTACACTGAGGGGGTaGGGGTCCTCCGGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSTTLRG*GSSGSW
Trigger: CCACGACCCGGAGGACCCCCACCCCCTCAGTGTAGT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCAGGCCCTCTCCCGTaGCCACCGTTTCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSAGPLP*PPFRVQ
Trigger: CTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCTTGTGGTCCACCACTaGCACCGGAAGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSLVVHH*HRKARA
Trigger: GGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTATCGTCCGGGGAAGGTaGCAGGTCCCCCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPIVRGR*QVPRTQ
Trigger: CTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGAT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGATCGTCCGGGGAAGGTaGCAGGTCCCCCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWIVRGR*QVPRTQ
Trigger: CTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGAT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSAFWRT*LPGPPG
Trigger: CCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCTACGCACTGCCTTCTaGCGCACATGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQLRTAF*RTWLPG
Trigger: CCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTGGGGCCCTGCAAAGTaGCGGTCAGTGGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKWGPAK*RSVAPR
Trigger: CCGTGGGGCCACTGACCGCCACTTTGCAGGGCCCCA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGGCCCTGCAAAGTaGCGGTCAGTGGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPWGPAK*RSVAPR
Trigger: CCGTGGGGCCACTGACCGCCACTTTGCAGGGCCCCA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTTCACAGCCACAAAATaGGGCCCTGCAAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPFTATK*GPAKWR
Trigger: CCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCCATTGCCCTCGCCATaGGAGCCAAACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPPLPSP*EPNLKR
Trigger: CCTCTTCAAGTTTGGCTCCCATGGCGAGGGCAATGG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLCTHP*DHSPGS
Trigger: TGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCTGCAGCTGCTGGCTaGTGCCCCCGACTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPAAAG*CPRLRQ
Trigger: TTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGGTCTCCAGGTCGCTaGCCAGAGCCTGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSWSPGR*PEPACA
Trigger: AGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTGCCGTCCGGGCCGGTaGTCTCTGCACGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRCRPGR*SLHAAQ
Trigger: CTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGGCCGCCAGGGGACTTaGCACGGCGCTTCACATCGT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPGRQGT*HGASHR
Trigger: ACGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCCCCAAAACGGAACTTaGACTGGCCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPPQNGT*TGPHWR
Trigger: TCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCAGGGGAGAAGATGCTaGCCCAACGGTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPQGRRC*PNGCHS
Trigger: ACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCTCCCTTGGGGCCCATaGGGCGGCCAGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLPWGP*GGQLQS
Trigger: AGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCTCCCTTGGGGCCCATaGGGCGGCCAGCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWLPWGP*GGQLQS
Trigger: AGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCTCCTGTGGGGGCATTaGACTGCCCATTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSLLWGH*TAHCPR
Trigger: GCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCTGTCCTCCCTCTTTaGCATGGCGCCCACAGATGG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQAVLPL*HGAHRW
Trigger: CCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACCGATCCAGGCAGATaGTGCATACCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTDPGR*CIPGTA
Trigger: AGCAGTTCCTGGTATGCAGCATCTGCCTGGATCGGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCCCTCAGCAGCACTGTaGCATGCTCACGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQPSAAL*HAHDAP
Trigger: GGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGAGGGCCGCCTTGTGCTaGTCCACCACATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRAALC*STTSLS
Trigger: GCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTGCAGGGCCGCCTTGTaGTGCTCCACCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQCRAAL*CSTTSL
Trigger: GAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTGCAGGGCCGCCTTGTaGTGCTCCACCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSCRAAL*CSTTSL
Trigger: GAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGTCCTCGAACGCTaGACTGATCTGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSQVLER*TDLGQG
Trigger: GCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCAGGTCCTCGAACGCTaGACTGATCTGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSQVLER*TDLGQG
Trigger: GCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCCTGCTTGCGCTGCTaGAGTGCTTGCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHACLRC*SACSRS
Trigger: GGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCAAAGCTGCAGCTACTaGCGATGTGTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPQSCSY*RCVPDP
Trigger: AGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCCTGCTCTGCAAAGCTaGAGCTACTGCCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPPALQS*SYCRCV
Trigger: AACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGAGCCGCTCTCGCATGTaGTTGCGCACCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQSRSRM*LRTSNT
Trigger: GGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGGCCTGTGCCGCCAATaGAGCCAGCCGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWGLCRQ*SQPLSH
Trigger: ATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGGCCTGTGCCGCCAATaGAGCCAGCCGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKGLCRQ*SQPLSH
Trigger: ATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGGCCACCGTTTCGTGTaGAGTGGCGCTCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQGHRFV*SGARGE
Trigger: CTCACCACGAGCGCCACTGCACACGAAACGGTGGCC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGCTCAGCGCTGCCTGTaGGCACCAACCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRAQRCL*APTARP
Trigger: AGGACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCACGCAGCTCAGCGCTaGCTGTGCGCACCAACCGCC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHAAQR*LCAPTA
Trigger: GGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCGGGCCGGTGATCTCTaGACGCAGCTCAGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRAGDL*TQLSAA
Trigger: GGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGCTGGGCCTACGCACTaGCTTCTGGCGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSAGPTH*LLAHMA
Trigger: AGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGTTGTCCTTTCGTTTaGCGCCTGTGCTGTACATGG +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGCPFV*RLCCTW
Trigger: CCATGTACAGCACAGGCGGCAAACGAAAGGACAACC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTGTCTGCTACCACGATaGGGCCGCTGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKCLLPR*GRCWLR
Trigger: CCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHAHIQC*QVWPTS
Trigger: GGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCATGGCGCCCACAGATaGCTCCCGCCACTCACACCA +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQHGAHR*LPPLTP
Trigger: TGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCATTGGCTGGACCTCTaGGCCAGGGCTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSHWLDL*ARAVLP
Trigger: AGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCCTGCTCTGGGAGGATaGACGTCTGCCGGCATACTG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQPALGG*TSAGIL
Trigger: CAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGAGACGCCCTGCTCTaGGAGGATGGACGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRDALL*EDGRLP
Trigger: CGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGACTACACTGAGGGGGTaGGGGTCCTCCGGGTCGTGG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWTTLRG*GSSGSW
Trigger: CCACGACCCGGAGGACCCCCACCCCCTCAGTGTAGT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTGCTGCGGACAGCTGTaGCAATCGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQCCGQL*QSATHS
Trigger: GCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCGCAGTGTGTCCAGCTaGCTTTGCAACACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRSVSS*LCNTFC
Trigger: ACAGAAGGTGTTGCAAAGCCAGCTGGACACACTGCG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCAGGCCCTCTCCCGTaGCCACCGTTTCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAGPLP*PPFRVQ
Trigger: CTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCTTGTGGTCCACCACTaGCACCGGAAGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLVVHH*HRKARA
Trigger: GGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQRLCCT*SWAYAL
Trigger: CAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGATGCGGCCGCTGCTaGCTGCGGACACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRCGRC*LRTHLV
Trigger: TACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCAGTGCTGCCAGGTCTaGCCCACCTCCCAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPQCCQV*PTSQPD
Trigger: GTCTGGCTGGGAGGTGGGCCAGACCTGGCAGCACTG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGAGGGACTCCTGTCCTaGGGTAGGCTGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHEGLLS*GRLFWP
Trigger: GGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGAGGGACTCCTGTCCTaGGGTAGGCTGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSEGLLS*GRLFWP
Trigger: GGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAGGGATTTCGGACTCTaGGAGCCTGTCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSRDFGL*EPVWAA
Trigger: GGCGGCCCAGACAGGCTCCCAGAGTCCGAAATCCCT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGTGGTCTCCAGGTCGCTaGCCAGAGCCTGCTTGCGCT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWWSPGR*PEPACA
Trigger: AGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCA...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGCCGATGTGTTCCTaGCCCTGGCGCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKLPMCS*PWRSVS
Trigger: GGACACACTGCGCCAGGGTCAGGAACACATCGGCAG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCCCAGTCAGCCACAATaGTGTTTCCATTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPPSQPQ*CFHWSP
Trigger: TGGACTCCAATGGAAACATCATTGTGGCTGACTGGG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCGCGTTGGAACAGGATaGGAGGGCAAAGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQRVGTG*EGKART
Trigger: AGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCTGTCCTCCCTCTTTaGCATGGCGCCCACAGATGG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHAVLPL*HGAHRW
Trigger: CCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGTGGGCCCCATCAGGTaGCTGCTGCATTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSVGPIR*LLHCLH
Trigger: ATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCAC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGTGCCATGCTCACGATaGTCCCCGGCGCGGCACTCA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRVPCSR*SPARHS
Trigger: TGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCAC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGAGCAGCACTGTGCCATaGTCACGATGCTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKSSTVP*SRCSPA
Trigger: CGCCGGGGAGCATCGTGAGCATGGCACAGTGCTGCT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCCTCAGCAGCACTGTaGCATGCTCACGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSPSAAL*HAHDAP
Trigger: GGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTTGCGCTCCTGCAGCTaGTGGCTGATGCCCCCGACT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKLRSCS*WLMPPT
Trigger: AGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCAGGTCCTCGAACGCTaGACTGATCTGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPQVLER*TDLGQG
Trigger: GCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGCTGCTGCAGTGCTTaGTCCAGGTCCTCGAACGCT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRCCSA*SRSSNA
Trigger: AGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRACLR*CSACSR
Trigger: CCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTCGCTGACCAGAGCCTaGTTGCGCTGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSSLTRA*LRCCSA
Trigger: AGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCGCAGTGCCTGCTCTaGAAAGCTGCAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSAQCLL*KAAATA
Trigger: GGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGCGCAGTGCCTGCTCTaGAAAGCTGCAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQAQCLL*KAAATA
Trigger: GGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCCAGGCGCAGTGCCTaGTCTGCAAAGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPRRSA*SAKLQL
Trigger: TAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGAGCCCAGGCGCAGTaGCTGCTCTGCAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRAQAQ*LLCKAA
Trigger: TGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCGAGCCCAGGCGCAGTaGCTGCTCTGCAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPRAQAQ*LLCKAA
Trigger: TGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCTCTCGCATGTGCTTaGGCACCAGCAACACCTCCG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHALACA*APATPP
Trigger: CGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGAGCCGCTCTCGCATGTaGTTGCGCACCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQSRSRM*LRTSNT
Trigger: GGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACAGCCGCTCTCGCATGTaGTTGCGCACCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSRSRM*LRTSNT
Trigger: GGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGGCCACCGTTTCGTGTaGAGTGGCGCTCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPGHRFV*SGARGE
Trigger: CTCACCACGAGCGCCACTGCACACGAAACGGTGGCC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCTCAGCGCTGCCTGTaGGCACCAACCGCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSAQRCL*APTARP
Trigger: AGGACGGGCGGTTGGTGCGCACAGGCAGCGCTGAGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCACGCAGCTCAGCGCTaGCTGTGCGCACCAACCGCC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSHAAQR*LCAPTA
Trigger: GGCGGTTGGTGCGCACAGGCAGCGCTGAGCTGCGTG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCTGGGCCTACGCACTaGCTTCTGGCGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAGPTH*LLAHMA
Trigger: AGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQFVCRL*CTWSWA
Trigger: GGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAA...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCCACGATGCGGCCGCTaGTGGCTGCGGACACACCTT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRPRCGR*WLRTHL
Trigger: AAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTGTCTGCTACCACGATaGGGCCGCTGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRCLLPR*GRCWLR
Trigger: CCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTCCATTGGTGTCCACTaGCACACCTGTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSIGVH*HTCGAL
Trigger: CAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTCCATTGGTGTCCACTaGCACACCTGTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSSIGVH*HTCGAL
Trigger: CAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCACAAAATGGGGCCCTaGAAAGTGGCGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQHKMGP*KVAVSG
Trigger: GCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGTGGGGGCATTGAACTaGCCATTGCCCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSVGALN*PLPSPW
Trigger: CCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCAC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGTGGGGGCATTGAACTaGCCATTGCCCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQVGALN*PLPSPW
Trigger: CCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCAC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGCCCACATTCAGTGCTaGCAGGTCTGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPAHIQC*QVWPTS
Trigger: GGAGGTGGGCCAGACCTGGCAGCACTGAATGTGGGC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCACCGGGTGCACCCATaGCCACAGCCCACATTCAGT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSHRVHP*PQPTFS
Trigger: ACTGAATGTGGGCTGTGGGCATGGGTGCACCCGGTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTAGGGAGGGCACCGGGTaGACCCATGCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSREGTG*THAHSP
Trigger: TGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCTCCCTCTTTGCCATaGCGCCCACAGATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPPSLP*RPQMAP
Trigger: GGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCATTGGCTGGACCTCTaGGCCAGGGCTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWHWLDL*ARAVLP
Trigger: AGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTGCTTGTCCATTGGCTaGACCTCTGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQCLSIG*TSGPGL
Trigger: CAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGCTGCGGACAGCTGTaGCAATCGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPCCGQL*QSATHS
Trigger: GCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGTGCTGCGGACAGCTGTaGCAATCGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWCCGQL*QSATHS
Trigger: GCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCA...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCAACACCTTCTGTTTaGCCCCACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPATPSV*PHKWSP
Trigger: TGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTTGTGGTCCACCACTaGCACCGGAAGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRLVVHH*HRKARA
Trigger: GGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRLCCT*SWAYAL
Trigger: CAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCGATGCGGCCGCTGCTaGCTGCGGACACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWRCGRC*LRTHLV
Trigger: TACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGAGCTGTCGAATACCTaGATGCGGCTGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQELSNT*MRLLPQ
Trigger: CTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCAGTGCCAGGCCCTGTaGACCATACAGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQQCQAL*TIQWFC
Trigger: GCAGAACCACTGTATGGTCCACAGGGCCTGGCACTG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTCAGCCACCACCACATaGCCATCCGAGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSSATTT*PSEVSA
Trigger: GGCACTGACCTCGGATGGCCATGTGGTGGTGGCTGA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTCAGCCACCACCACATaGCCATCCGAGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSATTT*PSEVSA
Trigger: GGCACTGACCTCGGATGGCCATGTGGTGGTGGCTGA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCCTGCAGCTGCTGGCTaGTGCCCCCGACTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRPAAAG*CPRLRQ
Trigger: TTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGCCGATGTGTTCCTaGCCCTGGCGCAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRLPMCS*PWRSVS
Trigger: GGACACACTGCGCCAGGGTCAGGAACACATCGGCAG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCGCGTTGGAACAGGATaGGAGGGCAAAGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSRVGTG*EGKART
Trigger: AGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGGAGGATGGACGTCTaGCGGCATACTGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGRMDV*RHTGQD
Trigger: ATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGAAGTTGTTCTGCAGTaGCGAGACGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHEVVLQ*RDALLW
Trigger: CCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCCATCAGGTGCCTGCTaGATTGCCTCCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQPSGAC*IASMRL
Trigger: CAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGCCCCATCAGGTGCCTaGTGCATTGCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWAPSGA*CIASMR
Trigger: CCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGTGGGCCCCATCAGGTaGCTGCTGCATTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPVGPIR*LLHCLH
Trigger: ATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCAC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGCAGCACTGTGCCATaGTCACGATGCTCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRSSTVP*SRCSPA
Trigger: CGCCGGGGAGCATCGTGAGCATGGCACAGTGCTGCT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCCCTCAGCAGCACTGTaGCATGCTCACGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPPSAAL*HAHDAP
Trigger: GGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCTCAGCAGCACTGTaGCATGCTCACGATGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPSAAL*HAHDAP
Trigger: GGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGGGCCGCCTTGTGCTaGTCCACCACATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRAALC*STTSLS
Trigger: GCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTGCAGGGCCGCCTTGTaGTGCTCCACCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRCRAAL*CSTTSL
Trigger: GAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCCTCGAGCTGGCGCTaGAGGGCCGCCTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWASSWR*RAALCC
Trigger: GCAGCACAAGGCGGCCCTGCAGCGCCAGCTCGAGGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTTGCGCTCCTGCAGCTaGTGGCTGATGCCCCCGACT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRLRSCS*WLMPPT
Trigger: AGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCGCTGCTGCAGTGCTTaGTCCAGGTCCTCGAACGCT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWRCCSA*SRSSNA
Trigger: AGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCTGCTGCAGTGCTTaGTCCAGGTCCTCGAACGCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRCCSA*SRSSNA
Trigger: AGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSLALLQ*LLQVLE
Trigger: TTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHLALLQ*LLQVLE
Trigger: TTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPRACLR*CSACSR
Trigger: CCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTCGCTGACCAGAGCCTaGTTGCGCTGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPSLTRA*LRCCSA
Trigger: AGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTCGCTGACCAGAGCCTaGTTGCGCTGCTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKSLTRA*LRCCSA
Trigger: AGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCGCAGTGCCTGCTCTaGAAAGCTGCAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAQCLL*KAAATA
Trigger: GGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGCGCAGTGCCTGCTCTaGAAAGCTGCAGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPAQCLL*KAAATA
Trigger: GGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCAGGCGCAGTGCCTaGTCTGCAAAGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPRRSA*SAKLQL
Trigger: TAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCCCAGGCGCAGTGCCTaGTCTGCAAAGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWPRRSA*SAKLQL
Trigger: TAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCGAGCCCAGGCGCAGTaGCTGCTCTGCAAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRAQAQ*LLCKAA
Trigger: TGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCAGCTCGCCTTCCGTaGGCGCTGTGTACACTAGCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAARLP*ALCTLA
Trigger: AGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGCAGCTCGCCTTCCGTaGGCGCTGTGTACACTAGCT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWAARLP*ALCTLA
Trigger: AGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTCTGGCGCACATGGCTaGCGGGGCCGCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWSGAHG*RGRQGT
Trigger: AGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHFVCRL*CTWSWA
Trigger: GGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSFVCRL*CTWSWA
Trigger: GGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSFVCRL*CTWSWA
Trigger: GGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCACGATGCGGCCGCTaGTGGCTGCGGACACACCTT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSPRCGR*WLRTHL
Trigger: AAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQLVVAV*YHDAAA
Trigger: AGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGTCCATTGGTGTCCACTaGCACACCTGTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWSIGVH*HTCGAL
Trigger: CAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGA...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCACAAAATGGGGCCCTaGAAAGTGGCGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSHKMGP*KVAVSG
Trigger: GCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGTGGGGGCATTGAACTaGCCATTGCCCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKVGALN*PLPSPW
Trigger: CCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCAC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCCATCCGAGGTCAGTaGCAGGCCCTGTGGACCATA +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKAIRGQ*QALWTI
Trigger: TATGGTCCACAGGGCCTGGCACTGACCTCGGATGGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACACCAGCCTCGCGTTaGAACAGGATGCGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTPASR*NRMRGQ
Trigger: TTGCCCTCGCATCCTGTTCCAACGCGAGGCTGGTGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCATGGCGCCCACAGATaGCTCCCGCCACTCACACCA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHGAHR*LPPLTP
Trigger: TGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCATTGGCTGGACCTCTaGGCCAGGGCTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHWLDL*ARAVLP
Trigger: AGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGCTTGTCCATTGGCTaGACCTCTGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPCLSIG*TSGPGL
Trigger: CAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGAACTGCTTGTCCATTaGCTGGACCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQELLVH*LDLWAR
Trigger: CCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCTGCTCTGGGAGGATaGACGTCTGCCGGCATACTG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPALGG*TSAGIL
Trigger: CAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCGAGACGCCCTGCTCTaGGAGGATGGACGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSRDALL*EDGRLP
Trigger: CGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGGTCCTCCGGGTCGTaGGCCCCATCAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGSSGS*APSGAC
Trigger: GCAGGCACCTGATGGGGCCCACGACCCGGAGGACCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCAGGCCCTCTCCCGTaGCCACCGTTTCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSAGPLP*PPFRVQ
Trigger: CTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWWPTSA*RRPSPV
Trigger: CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTACGCACTGCCTTCTaGCGCACATGGCTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLRTAF*RTWLPG
Trigger: CCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPRLCCT*SWAYAL
Trigger: CAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTAGTTTGCCATTGGGCTaGAAGGTAAAGACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPSLPLG*KVKTQQ
Trigger: TTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGTGCCAGGCCCTGTaGACCATACAGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSQCQAL*TIQWFC
Trigger: GCAGAACCACTGTATGGTCCACAGGGCCTGGCACTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCAGTGCCAGGCCCTGTaGACCATACAGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQQCQAL*TIQWFC
Trigger: GCAGAACCACTGTATGGTCCACAGGGCCTGGCACTG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCATCGTCTTCATGGTTaGGGCAGGAGAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWHRLHG*GRREGG
Trigger: GCCGCCCTCTCTCCTGCCCCAACCATGAAGACGATG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCCTCAGCACGATCTCTaGGCGGCAGAAGGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWPQHDL*AAEGQY
Trigger: GTACTGCCCTTCTGCCGCCCAGAGATCGTGCTGAGG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCATGGGAGCCAAACTTaGAGAGGAACTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQHGSQT*RGTLHR
Trigger: CCGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTCCTGTGGGGGCATTaGACTGCCCATTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLLWGH*TAHCPR
Trigger: GCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCGTTGGAACAGGATaGGAGGGCAAAGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRVGTG*EGKART
Trigger: AGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGACCGATCCAGGCAGATaGTGCATACCAGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQTDPGR*CIPGTA
Trigger: AGCAGTTCCTGGTATGCAGCATCTGCCTGGATCGGT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGGGAGGATGGACGTCTaGCGGCATACTGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWGRMDV*RHTGQD
Trigger: ATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTAGTGCCGAGACGCCCTaGTCTGGGAGGATGGACGTC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSSAETP*SGRMDV
Trigger: GACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGAAGTTGTTCTGCAGTaGCGAGACGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKEVVLQ*RDALLW
Trigger: CCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGAAGTTGTTCTGCAGTaGCGAGACGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWEVVLQ*RDALLW
Trigger: CCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAGGTGCCTGCTGCATTaGCTCCATGAGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSRCLLH*LHEAAD
Trigger: ATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGAGGTGCCTGCTGCATTaGCTCCATGAGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRCLLH*LHEAAD
Trigger: ATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCCATCAGGTGCCTGCTaGATTGCCTCCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPPSGAC*IASMRL
Trigger: CAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCATCAGGTGCCTGCTaGATTGCCTCCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPSGAC*IASMRL
Trigger: CAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCCATCAGGTGCCTGCTaGATTGCCTCCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWPSGAC*IASMRL
Trigger: CAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGCCCCATCAGGTGCCTaGTGCATTGCCTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRAPSGA*CIASMR
Trigger: CCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGTGGGCCCCATCAGGTaGCTGCTGCATTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRVGPIR*LLHCLH
Trigger: ATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCAC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTAGGGCCGCCTTGTGCTaGTCCACCACATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSRAALC*STTSLS
Trigger: GCTGAGGGATGTGGTGGAGCAGCACAAGGCGGCCCT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGCAGGGCCGCCTTGTaGTGCTCCACCACATCCCTC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCRAAL*CSTTSL
Trigger: GAGGGATGTGGTGGAGCAGCACAAGGCGGCCCTGCA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCGCTGCTGCAGTGCTTaGTCCAGGTCCTCGAACGCT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRCCSA*SRSSNA
Trigger: AGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLALLQ*LLQVLE
Trigger: TTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCAAAGCTGCAGCTACTaGCGATGTGTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQQSCSY*RCVPDP
Trigger: AGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGCTCTCGCATGTGCTTaGGCACCAGCAACACCTCCG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRALACA*APATPP
Trigger: CGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGCCGCTCTCGCATGTaGTTGCGCACCAGCAACACC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRSRSRM*LRTSNT
Trigger: GGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHDQFQL*ILMWPL
Trigger: GAGCGGCCACATGAGAATGCACAGCTGGAACTGGTC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSDQFQL*ILMWPL
Trigger: GAGCGGCCACATGAGAATGCACAGCTGGAACTGGTC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKLVVAV*YHDAAA
Trigger: AGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCACAAAATGGGGCCCTaGAAAGTGGCGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPHKMGP*KVAVSG
Trigger: GCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGTGGGGGCATTGAACTaGCCATTGCCCTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRVGALN*PLPSPW
Trigger: CCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCAC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGAGGGAGGGCACCGGGTaGACCCATGCCCACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWREGTG*THAHSP
Trigger: TGGGCTGTGGGCATGGGTGCACCCGGTGCCCTCCCT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGRVKL*THPWDH
Trigger: GTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQGRVKL*THPWDH
Trigger: GTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCTGTCCCTGCAGGTTTaGAGCCCAGGATCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWLSLQV*SPGSEA
Trigger: GGCTTCAGATCCTGGGCTGCAAACCTGCAGGGACAG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGAACTGCTTGTCCATTaGCTGGACCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWELLVH*LDLWAR
Trigger: CCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGCAAGGAAGAACCTTaGGGCACTGGTACCGATCCA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGKEEP*GTGTDP
Trigger: TGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCCTGCTCTGGGAGGATaGACGTCTGCCGGCATACTG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRPALGG*TSAGIL
Trigger: CAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGATCGTCTTGCCTTCATaGTTGGGGCAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQIVLPS*LGQERG
Trigger: CCCTCTCTCCTGCCCCAACCATGAAGGCAAGACGAT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGCTGCGGACAGCTGTaGCAATCGGCCACGCACAGC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCCGQL*QSATHS
Trigger: GCTGTGCGTGGCCGATTGCCACAGCTGTCCGCAGCA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGGGCTGCCGCGCACTaGCTGTCCGTAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGAAAH*LSVEQH
Trigger: GTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGATCGTCCGGGGAAGGTaGCAGGTCCCCCGGACGCAG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWIVRGR*QVPRTQ
Trigger: CTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGAT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSCCTWS*AYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCGATGCGGCCGCTGCTaGCTGCGGACACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSRCGRC*LRTHLV
Trigger: TACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTTCACAGCCACAAAATaGGGCCCTGCAAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHFTATK*GPAKWR
Trigger: CCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCATTGCCCTCGCCATaGGAGCCAAACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSPLPSP*EPNLKR
Trigger: CCTCTTCAAGTTTGGCTCCCATGGCGAGGGCAATGG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGAGCTGTCGAATACCTaGATGCGGCTGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPELSNT*MRLLPQ
Trigger: CTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGTGGACCATACAGTaGTTCTGCAGATGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLWTIQ*FCRCVD
Trigger: ATCAACACATCTGCAGAACCACTGTATGGTCCACAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSLCTHP*DHSPGS
Trigger: TGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGAGGGACTCCTGTCCTaGGGTAGGCTGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSEGLLS*GRLFWP
Trigger: GGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCCCCAAAACGGAACTTaGACTGGCCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQPQNGT*TGPHWR
Trigger: TCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCCCAAAACGGAACTTaGACTGGCCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPQNGT*TGPHWR
Trigger: TCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCAGGGGAGAAGATGCTaGCCCAACGGTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHQGRRC*PNGCHS
Trigger: ACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCATGGGAGCCAAACTTaGAGAGGAACTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQHGSQT*RGTLHR
Trigger: CCGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCCCAGTCAGCCACAATaGTGTTTCCATTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQPSQPQ*CFHWSP
Trigger: TGGACTCCAATGGAAACATCATTGTGGCTGACTGGG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGTAAGAAGGGTAGGGTaGAGCTCTGCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQVRRVG*SSAHIL
Trigger: AAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTAC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGQSSD*GHSEGP
Trigger: GGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCTGTCCTCCCTCTTTaGCATGGCGCCCACAGATGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSAVLPL*HGAHRW
Trigger: CCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGATCCAGGCAGATGCTaGATACCAGGAACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQDPGRC*IPGTAC
Trigger: ACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGAAGTTGTTCTGCAGTaGCGAGACGCCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGREVVLQ*RDALLW
Trigger: CCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCATGAAGAAGTTGTTCTaGAGTGCCGAGACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSMKKLF*SAETPC
Trigger: GCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCAT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTATGAAGAAGTTGTTCTaGAGTGCCGAGACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSMKKLF*SAETPC
Trigger: GCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCAT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGAGGTGCCTGCTGCATTaGCTCCATGAGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWRCLLH*LHEAAD
Trigger: ATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGTGGGCCCCATCAGGTaGCTGCTGCATTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSVGPIR*LLHCLH
Trigger: ATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCAC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCTGCTCTGCAAAGCTaGAGCTACTGCCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPALQS*SYCRCV
Trigger: AACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCTGCTCTGCAAAGCTaGAGCTACTGCCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPALQS*SYCRCV
Trigger: AACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCCAGGCGCAGTGCCTaGTCTGCAAAGCTGCAGCTA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSPRRSA*SAKLQL
Trigger: TAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGCCTGTGCCGCCAATaGAGCCAGCCGCTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGLCRQ*SQPLSH
Trigger: ATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKDQFQL*ILMWPL
Trigger: GAGCGGCCACATGAGAATGCACAGCTGGAACTGGTC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWDQFQL*ILMWPL
Trigger: GAGCGGCCACATGAGAATGCACAGCTGGAACTGGTC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTGTCTGCTACCACGATaGGGCCGCTGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWCLLPR*GRCWLR
Trigger: CCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCACAAAATGGGGCCCTaGAAAGTGGCGGTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHKMGP*KVAVSG
Trigger: GCCACTGACCGCCACTTTGCAGGGCCCCATTTTGTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGTGTCGAATACCTGGATaGGGCTGTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWCRIPG*GCCPSQ
Trigger: CTGACTGGGGCAACAGCCGCATCCAGGTATTCGACA...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTACAGCCCACATTCAGTaGTGCCAGGTCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSTAHIQ*CQVWPT
Trigger: GGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPGRVKL*THPWDH
Trigger: GTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGGTAGGGTGAAGCTCTaGACACATCCTTGGGACCAC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWGRVKL*THPWDH
Trigger: GTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGCTTGTCCATTGGCTaGACCTCTGGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCLSIG*TSGPGL
Trigger: CAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGAACTGCTTGTCCATTaGCTGGACCTCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRELLVH*LDLWAR
Trigger: CCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGCAGTGTGTCCAGCTaGCTTTGCAACACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRSVSS*LCNTFC
Trigger: ACAGAAGGTGTTGCAAAGCCAGCTGGACACACTGCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCTTGTGGTCCACCACTaGCACCGGAAGGCGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLVVHH*HRKARA
Trigger: GGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTATGTGCCATTCTTGTaGTCCACCACTGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSYVPFL*STTGTG
Trigger: TCCGGTGCCAGTGGTGGACCACAAGAATGGCACATA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPCCTWS*AYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCATTGCCCTCGCCATaGGAGCCAAACTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPLPSP*EPNLKR
Trigger: CCTCTTCAAGTTTGGCTCCCATGGCGAGGGCAATGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGAGCTGTCGAATACCTaGATGCGGCTGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRELSNT*MRLLPQ
Trigger: CTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCAGTGCCAGGCCCTGTaGACCATACAGTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRQCQAL*TIQWFC
Trigger: GCAGAACCACTGTATGGTCCACAGGGCCTGGCACTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTCAGCCACCACCACATaGCCATCCGAGGTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSSATTT*PSEVSA
Trigger: GGCACTGACCTCGGATGGCCATGTGGTGGTGGCTGA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTCAAGAAAAGGCAGCTaGGGCAGCAGGGATTTCGGA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSSRKGS*GSRDFG
Trigger: TCCGAAATCCCTGCTGCCCCAGCTGCCTTTTCTTGA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCCTGCAGCTGCTGGCTaGTGCCCCCGACTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWPAAAG*CPRLRQ
Trigger: TTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCAGGGGAGAAGATGCTaGCCCAACGGTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWQGRRC*PNGCHS
Trigger: ACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCATGGGAGCCAAACTTaGAGAGGAACTCTCCATCGG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPHGSQT*RGTLHR
Trigger: CCGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCTCCTGTGGGGGCATTaGACTGCCCATTGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLLWGH*TAHCPR
Trigger: GCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCCAGTCAGCCACAATaGTGTTTCCATTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPSQPQ*CFHWSP
Trigger: TGGACTCCAATGGAAACATCATTGTGGCTGACTGGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCCCAGTCAGCCACAATaGTGTTTCCATTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSPSQPQ*CFHWSP
Trigger: TGGACTCCAATGGAAACATCATTGTGGCTGACTGGG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGTTCTGCAGATGTGTTaGTATAGGACAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQVLQMC*YRTGRS
Trigger: GCTCCTTCCTGTCCTATATCAACACATCTGCAGAAC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGTAAGAAGGGTAGGGTaGAGCTCTGCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQVRRVG*SSAHIL
Trigger: AAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTAC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGTAAGAAGGGTAGGGTaGAGCTCTGCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSVRRVG*SSAHIL
Trigger: AAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTAC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGGGAGGATGGACGTCTaGCGGCATACTGGACAGGAT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSGRMDV*RHTGQD
Trigger: ATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGAGTGCCGAGACGCCCTaGTCTGGGAGGATGGACGTC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWSAETP*SGRMDV
Trigger: GACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGATGAAGAAGTTGTTCTaGAGTGCCGAGACGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKMKKLF*SAETPC
Trigger: GCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCAT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGGTGCCTGCTGCATTaGCTCCATGAGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRCLLH*LHEAAD
Trigger: ATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTTGCGCTCCTGCAGCTaGTGGCTGATGCCCCCGACT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLRSCS*WLMPPT
Trigger: AGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCAGGTCCTCGAACGCTaGACTGATCTGGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWQVLER*TDLGQG
Trigger: GCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGTGTCCAGCTGGCTTTaGAACACCTTCTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPVSSWL*NTFCLA
Trigger: GGCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACAC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGCCACCGTTTCGTGTaGAGTGGCGCTCGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGHRFV*SGARGE
Trigger: CTCACCACGAGCGCCACTGCACACGAAACGGTGGCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLVVAV*YHDAAA
Trigger: AGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACCATACAGTGGTTCTaGAGATGTGTTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTIQWF*RCVDIG
Trigger: TCCTATATCAACACATCTGCAGAACCACTGTATGGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGATCGTCTTGCCTTCATaGTTGGGGCAGGAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRIVLPS*LGQERG
Trigger: CCCTCTCTCCTGCCCCAACCATGAAGGCAAGACGAT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGCAACACCTTCTGTTTaGCCCCACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQATPSV*PHKWSP
Trigger: TGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCAACACCTTCTGTTTaGCCCCACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSATPSV*PHKWSP
Trigger: TGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGCAACACCTTCTGTTTaGCCCCACAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSATPSV*PHKWSP
Trigger: TGGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCAGTGTGTCCAGCTaGCTTTGCAACACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRSVSS*LCNTFC
Trigger: ACAGAAGGTGTTGCAAAGCCAGCTGGACACACTGCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRCCTWS*AYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCGATGCGGCCGCTGCTaGCTGCGGACACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWRCGRC*LRTHLV
Trigger: TACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTTCACAGCCACAAAATaGGGCCCTGCAAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRFTATK*GPAKWR
Trigger: CCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTACACCTTCACTGAATaGTTATGGAAGTCCGTTACT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPYTFTE*LWKSVT
Trigger: AGTAACGGACTTCCATAACCATTCAGTGAAGGTGTA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGAGCTGTCGAATACCTaGATGCGGCTGTTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSELSNT*MRLLPQ
Trigger: CTGGGGCAACAGCCGCATCCAGGTATTCGACAGCTC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGGGTCCTTTCCGCGTTaGAACAGGATGCGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSGSFPR*NRMRGQ
Trigger: TTGCCCTCGCATCCTGTTCCAACGCGGAAAGGACCC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTTGGAGACATCGCGTTaGAACAGGATGCGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLETSR*NRMRGQ
Trigger: TTGCCCTCGCATCCTGTTCCAACGCGATGTCTCCAA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536344.5
CDS-3UTR TCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGTGTTGTCGACCACAATaGTATGTCCATTCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQCCRPQ*YVHSGL
Trigger: TAGACCGGAATGGACATATCATTGTGGTCGACAACA...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGTTCTGCAGATGTGTTaGTATAGGACAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSVLQMC*YRTGRS
Trigger: GCTCCTTCCTGTCCTATATCAACACATCTGCAGAAC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGTAAGAAGGGTAGGGTaGAGCTCTGCACACATCCTT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKVRRVG*SSAHIL
Trigger: AAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTAC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTTGCAGCCCAGGATCTaGAGCCAATTGCAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRLQPRI*SQLQKG
Trigger: TCCCTTCTGCAATTGGCTTCAGATCCTGGGCTGCAA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTCTCAGGGATTGAGATaGGACTCCGTCAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQSQGLR*DSVKKR
Trigger: CCTTTTCTTGACGGAGTCTCATCTCAATCCCTGAGA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGATCCAGGCAGATGCTaGATACCAGGAACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWDPGRC*IPGTAC
Trigger: ACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGAAAACTCCATCGTCTTaGCTTCATGGTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKKTPSS*LHGWGR
Trigger: CCTGCCCCAACCATGAAGGCAAGACGATGGAGTTTT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGAAAACTCCATCGTCTTaGCTTCATGGTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWKTPSS*LHGWGR
Trigger: CCTGCCCCAACCATGAAGGCAAGACGATGGAGTTTT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWRACLR*CSACSR
Trigger: CCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCCTGCTCTGCAAAGCTaGAGCTACTGCCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRPALQS*SYCRCV
Trigger: AACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCTCTCGCATGTGCTTaGGCACCAGCAACACCTCCG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWALACA*APATPP
Trigger: CGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGAATACACTGGTTGTTaGTGTCTGCTACCACGATGC +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQEYTGC*CLLPRC
Trigger: GCATCGTGGTAGCAGACAGCAACAACCAGTGTATTC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTCCATTGGTGTCCACTaGCACACCTGTGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWSIGVH*HTCGAL
Trigger: CAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGTCGAATACCTGGATaGGGCTGTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCRIPG*GCCPSQ
Trigger: CTGACTGGGGCAACAGCCGCATCCAGGTATTCGACA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCCATCCGAGGTCAGTaGCAGGCCCTGTGGACCATA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWAIRGQ*QALWTI
Trigger: TATGGTCCACAGGGCCTGGCACTGACCTCGGATGGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTATGTGCCATTCTTGTaGTCCACCACTGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRYVPFL*STTGTG
Trigger: TCCGGTGCCAGTGGTGGACCACAAGAATGGCACATA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCAATTATGTCTCCATTaGTGTCCACTGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHQLCLH*CPLPHL
Trigger: CAGGTGTGGCAGTGGACACCAATGGAGACATAATTG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAATTATGTCTCCATTaGTGTCCACTGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSQLCLH*CPLPHL
Trigger: CAGGTGTGGCAGTGGACACCAATGGAGACATAATTG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTTCACAGCCACAAAATaGGGCCCTGCAAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSFTATK*GPAKWR
Trigger: CCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTCTGCACACATCCTTaGGACCACAGTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLCTHP*DHSPGS
Trigger: TGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTGTTGTCGACCACAATaGTATGTCCATTCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSCCRPQ*YVHSGL
Trigger: TAGACCGGAATGGACATATCATTGTGGTCGACAACA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTGTTGTCGACCACAATaGTATGTCCATTCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHCCRPQ*YVHSGL
Trigger: TAGACCGGAATGGACATATCATTGTGGTCGACAACA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACTGTACACCTTCACTaGATGGTTATGGAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTVHLH*MVMEVR
Trigger: ACGGACTTCCATAACCATTCAGTGAAGGTGTACAGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGTCGGTCTCAGGGATTaGGATGAGACTCCGTCAAGA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSVGLRD*DETPSR
Trigger: TCTTGACGGAGTCTCATCTCAATCCCTGAGACCGAC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLALLQ*LLQVLE
Trigger: TTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCAAAGCTGCAGCTACTaGCGATGTGTTCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSQSCSY*RCVPDP
Trigger: AGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACACTAGCTCATATGTaGCATTCTTGTGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTLAHM*HSCGPP
Trigger: TGGTGGACCACAAGAATGGCACATATGAGCTAGTGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGGTTGTCCTTTCGTTTaGCGCCTGTGCTGTACATGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSGCPFV*RLCCTW
Trigger: CCATGTACAGCACAGGCGGCAAACGAAAGGACAACC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGAATACACTGGTTGTTaGTGTCTGCTACCACGATGC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKEYTGC*CLLPRC
Trigger: GCATCGTGGTAGCAGACAGCAACAACCAGTGTATTC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGAATACACTGGTTGTTaGTGTCTGCTACCACGATGC +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWEYTGC*CLLPRC
Trigger: GCATCGTGGTAGCAGACAGCAACAACCAGTGTATTC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTATGTGCCATTCTTGTaGTCCACCACTGGCACCGGA +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSYVPFL*STTGTG
Trigger: TCCGGTGCCAGTGGTGGACCACAAGAATGGCACATA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACAAACGGAACTTGAACTaGCCCTCATTGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHKRNLN*PSLEKT
Trigger: GGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCAAACGGAACTTGAACTaGCCCTCATTGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSKRNLN*PSLEKT
Trigger: GGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCAATTATGTCTCCATTaGTGTCCACTGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWQLCLH*CPLPHL
Trigger: CAGGTGTGGCAGTGGACACCAATGGAGACATAATTG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGAGTTTGCCATTGGGCTaGAAGGTAAAGACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWSLPLG*KVKTQQ
Trigger: TTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTAGTTTGCCATTGGGCTaGAAGGTAAAGACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPSLPLG*KVKTQQ
Trigger: TTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTTCACTGAATGGTTATaGAAGTCCGTTACTACAATT +
Preference number: 4 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPFTEWL*KSVTTI
Trigger: AATTGTAGTAACGGACTTCCATAACCATTCAGTGAA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCTGTGGACCATACAGTaGTTCTGCAGATGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSLWTIQ*FCRCVD
Trigger: ATCAACACATCTGCAGAACCACTGTATGGTCCACAG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCTTGGAGTGCTCCTATaGAATATGCTAGTCTATCGG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQLGVLL*NMLVYR
Trigger: CCGATAGACTAGCATATTCCATAGGAGCACTCCAAG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCTTGTAAATTGGTaGATTCACCTTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSHLVNW*IHLSPF
Trigger: GAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTCATTGGAGAAAACCTaGATACACTGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSSLEKT*IHWLLL
Trigger: CAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTCATTGGAGAAAACCTaGATACACTGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ARPSCPITPMSVPPQARQSLEKT*IHWLLL
Trigger: CAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTGTTGTCGACCACAATaGTATGTCCATTCCGGTCTA +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKCCRPQ*YVHSGL
Trigger: TAGACCGGAATGGACATATCATTGTGGTCGACAACA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGATCCAGGCAGATGCTaGATACCAGGAACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSDPGRC*IPGTAC
Trigger: ACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTAAAACTCCATCGTCTTaGCTTCATGGTTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSKTPSS*LHGWGR
Trigger: CCTGCCCCAACCATGAAGGCAAGACGATGGAGTTTT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR GCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTACACTAGCTCATATGTaGCATTCTTGTGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPTLAHM*HSCGPP
Trigger: TGGTGGACCACAAGAATGGCACATATGAGCTAGTGT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGACACTAGCTCATATGTaGCATTCTTGTGGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKTLAHM*HSCGPP
Trigger: TGGTGGACCACAAGAATGGCACATATGAGCTAGTGT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGAATACACTGGTTGTTaGTGTCTGCTACCACGATGC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGREYTGC*CLLPRC
Trigger: GCATCGTGGTAGCAGACAGCAACAACCAGTGTATTC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTGTCGAATACCTGGATaGGGCTGTTGCCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWCRIPG*GCCPSQ
Trigger: CTGACTGGGGCAACAGCCGCATCCAGGTATTCGACA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGACCATACAGTGGTTCTaGAGATGTGTTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQTIQWF*RCVDIG
Trigger: TCCTATATCAACACATCTGCAGAACCACTGTATGGT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWCCTWS*AYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTAAACGGAACTTGAACTaGCCCTCATTGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPKRNLN*PSLEKT
Trigger: GGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCAATTATGTCTCCATTaGTGTCCACTGCCACACCTG +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRQLCLH*CPLPHL
Trigger: CAGGTGTGGCAGTGGACACCAATGGAGACATAATTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAGTTTGCCATTGGGCTaGAAGGTAAAGACGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRSLPLG*KVKTQQ
Trigger: TTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCTGTGGACCATACAGTaGTTCTGCAGATGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLWTIQ*FCRCVD
Trigger: ATCAACACATCTGCAGAACCACTGTATGGTCCACAG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCACCTTGTAAATTGGTaGATTCACCTTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKHLVNW*IHLSPF
Trigger: GAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTCATTGGAGAAAACCTaGATACACTGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPSLEKT*IHWLLL
Trigger: CAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCCCCAAAACGGAACTTaGACTGGCCCTCATTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWPQNGT*TGPHWR
Trigger: TCTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCAGGGGAGAAGATGCTaGCCCAACGGTTGTCATAGT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWQGRRC*PNGCHS
Trigger: ACTATGACAACCGTTGGGTCAGCATCTTCTCCCCTG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGTGTCCAGCTGGCTTTaGAACACCTTCTGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWVSSWL*NTFCLA
Trigger: GGCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACAC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTACACCTTCACTGAATaGTTATGGAAGTCCGTTACT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSYTFTE*LWKSVT
Trigger: AGTAACGGACTTCCATAACCATTCAGTGAAGGTGTA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGACATTTATTTAATATaGGGGGTGGGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSDIYLI*GVGYCC
Trigger: ACAGCAATACCCCACCCCCCATATTAAATAAATGTC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTGACATTTATTTAATATaGGGGGTGGGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSDIYLI*GVGYCC
Trigger: ACAGCAATACCCCACCCCCCATATTAAATAAATGTC...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCACCTTGTAAATTGGTaGATTCACCTTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHLVNW*IHLSPF
Trigger: GAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTACTGTACACCTTCACTaGATGGTTATGGAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSTVHLH*MVMEVR
Trigger: ACGGACTTCCATAACCATTCAGTGAAGGTGTACAGT...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTGTGGACCATACAGTaGTTCTGCAGATGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLWTIQ*FCRCVD
Trigger: ATCAACACATCTGCAGAACCACTGTATGGTCCACAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGACATTTATTTAATATaGGGGGTGGGGTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKDIYLI*GVGYCC
Trigger: ACAGCAATACCCCACCCCCCATATTAAATAAATGTC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGTTCTGCAGATGTGTTaGTATAGGACAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWVLQMC*YRTGRS
Trigger: GCTCCTTCCTGTCCTATATCAACACATCTGCAGAAC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCTTCACTGAATGGTTATaGAAGTCCGTTACTACAATT +
Preference number: 4 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSFTEWL*KSVTTI
Trigger: AATTGTAGTAACGGACTTCCATAACCATTCAGTGAA...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTACACCTTCACTGAATaGTTATGGAAGTCCGTTACT +
Preference number: 4 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRYTFTE*LWKSVT
Trigger: AGTAACGGACTTCCATAACCATTCAGTGAAGGTGTA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCCTTTCCGGCTTCCTTaGAGTGCTCCTATGGAATAT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWPFRLP*SAPMEY
Trigger: ATATTCCATAGGAGCACTCCAAGGAAGCCGGAAAGG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGACTGTACACCTTCACTaGATGGTTATGGAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWTVHLH*MVMEVR
Trigger: ACGGACTTCCATAACCATTCAGTGAAGGTGTACAGT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGAAACGGAACTTGAACTaGCCCTCATTGGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWKRNLN*PSLEKT
Trigger: GGTTTTCTCCAATGAGGGCCAGTTCAAGTTCCGTTT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTTCACTGAATGGTTATaGAAGTCCGTTACTACAATT +
Preference number: 4 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPFTEWL*KSVTTI
Trigger: AATTGTAGTAACGGACTTCCATAACCATTCAGTGAA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CCA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTACACCTTCACTGAATaGTTATGGAAGTCCGTTACT +
Preference number: 4 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSYTFTE*LWKSVT
Trigger: AGTAACGGACTTCCATAACCATTCAGTGAAGGTGTA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCACCTTGTAAATTGGTaGATTCACCTTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWHLVNW*IHLSPF
Trigger: GAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR TCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTCATTGGAGAAAACCTaGATACACTGGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWSLEKT*IHWLLL
Trigger: CAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR GCA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGACCATACAGTGGTTCTaGAGATGTGTTGATATAGGA +
Preference number: 4 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWTIQWF*RCVDIG
Trigger: TCCTATATCAACACATCTGCAGAACCACTGTATGGT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS CCA 90 bp GTCCCCCGGACGCAGGGCACGCACGCGGAAGGGGCTGCCGCGCACTaGCTGTCCGTAGAGCAGCACCGAGAGGAGCAGCTCGCCTTCCGT +
Preference number: 5 (lower is better)
Translates to: VPRTQGTHAEGAAAH*LSVEQHREEQLAFR
Trigger: ACGGAAGGCGAGCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGTCCGGGGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS TCA 90 bp GCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTGCGGCCACTCTaGAGGGCCCGCGGCGCTGCTACTGCTGCCAGCGCCCGTCCGCCC +
Preference number: 5 (lower is better)
Translates to: ALEQDARAKLGLRPL*RARGAATAASARPP
Trigger: GGGCGGACGGGCGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
CDS GCA 90 bp AAGGTGGCAGGTCCCCCGGACGCAGGGCACGCACGCGGAAGGGGCTaGCGCGCACTGGCTGTCCGTAGAGCAGCACCGAGAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KVAGPPDAGHARGRG*RALAVRRAAPRGAA
Trigger: AGCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGTCCGGGGGACCTGCCACCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp CCGGCGAGCCGGATCCCGGATCTCGGATCCCGGATCTCCGCCAGCTaGCTCCGGCTCCGGGAAGGGCGGTGTAGTCGGTCTCAGGGATTG +
Preference number: 5 (lower is better)
Translates to: PASRIPDLGSRISAS*LRLREGRCSRSQGL
Trigger: CAATCCCTGAGACCGACTACACCGCCCTTCCCGGAGCCGGAGGCAGCTGGCGGAGATCCGGGATCCGAGATCCGGGATCCGGCTCGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CCA 90 bp TTGCCGCCTGTGCTGTACATGGAGCTGGGCCTACGCACTGCCTTCTaGCGCACATGGCTGCCGGGGCCGCCAGGGGACTTGACACGGCGC +
Preference number: 5 (lower is better)
Translates to: LPPVLYMELGLRTAF*RTWLPGPPGDLTRR
Trigger: GCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CTCTGGGCCAGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATaGCTCCCGCCACTCACACCAGCCTCTCCTGCGGACGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LWARAVLPLCHGAHR*LPPLTPASPADAAS
Trigger: GGAGGCAGCGTCCGCAGGAGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS GCA 90 bp ACACCAGCCTCGCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCCGCGGCGCTGCTACTGCTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: TPASRWNRMRGQSSD*GHSEGPAALLLLPA
Trigger: CGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGAGGCTGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS GCA 90 bp GGGTCCTTTCCGCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCCGCGGCGCTGCTACTGCTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: GSFPRWNRMRGQSSD*GHSEGPAALLLLPA
Trigger: CGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGGAAAGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359518.7
ENST00000528227.5
CDS CCA 90 bp CCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTTGCCATaGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTCGCGTTG +
Preference number: 5 (lower is better)
Translates to: PLAGPLGQGCPPSLP*RPQMAPATHTSLAL
Trigger: CAACGCGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS CCA 90 bp TCTTTGGTAGTGACAGTGAGCGAGGCAGGCTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTGGCCACCGTTTCGTGTGCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: SLVVTVSEAGWPTSA*RRPSPVATVSCAVA
Trigger: CGCCACTGCACACGAAACGGTGGCCACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACTGTCACTACCAAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp GTGCTGTACATGGAGCTGGGCCTACGCACTGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGGGACTTGACACGGCGCTTCACATCG +
Preference number: 5 (lower is better)
Translates to: VLYMELGLRTAFWRT*LPGPPGDLTRRFTS
Trigger: CGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTTGCCATaGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PLAGPLGQGCPPSLP*RPQMAPATHTSLSL
Trigger: CAGGGAGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359518.7
ENST00000528227.5
ENST00000529529.1
CDS CCA 90 bp AAAGGCAGCTGGGGCAGCAGGGATTTCGGACTCTGGGAGCCTGTCTaGGCCGCCTGCCTCCTGGAGGCGCCCTTTCCGGCTTCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: KGSWGSRDFGLWEPV*AACLLEAPFPASLE
Trigger: CTCCAAGGAAGCCGGAAAGGGCGCCTCCAGGAGGCAGGCGGCCCAGACAGGCTCCCAGAGTCCGAAATCCCTGCTGCCCCAGCTGCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CCA 90 bp CCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTTGCCATaGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PLAGPLGQGCPPSLP*RPQMAPATHTSLSC
Trigger: GCAGGAGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS GCA 90 bp CTTGTCCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTTaGCATGGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: LVHWLDLWARAVLPL*HGAHRWLPPLTPAS
Trigger: CGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS GCA 90 bp ACACCTCCGGGGCCGAGCCCAGGCGCAGTGCCTGCTCTGCAAAGCTaGAGCTACTGCCGATGTGTTCCTGACCCTGGCGCAGTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TPPGPSPGAVPALQS*SYCRCVPDPGAVCP
Trigger: TGGACACACTGCGCCAGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCGGCCCCGGAGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp TCCCGTGGCCACCGTTTCGTGTGCAGTGGCGCTCGTGGTGAGCAGTaGGCCCAGATTGAGCACCGATCGCCGCAGACCGTCCACCTCAAG +
Preference number: 5 (lower is better)
Translates to: SRGHRFVCSGARGEQ*AQIEHRSPQTVHLK
Trigger: CTTGAGGTGGACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAAACGGTGGCCACGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp TTGGAGACATCGCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCCGCGGCGCTGCTACTGCTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LETSRWNRMRGQSSD*GHSEGPAALLLLPA
Trigger: CGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGATGTCTCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528932.1
ENST00000536344.5
CDS CCA 90 bp CTCTGGGCCAGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATaGCTCCCGCCACTCACACCAGCCTCGCGTTGGAACAGGATGCGA +
Preference number: 5 (lower is better)
Translates to: LWARAVLPLCHGAHR*LPPLTPASRWNRMR
Trigger: TCGCATCCTGTTCCAACGCGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGTCTTGCCTTCATGGTaGGGGCAGGAGAGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPVLPSW*GQERGR
Trigger: CCGCCCTCTCTCCTGCCCCAACCATGAAGGCAAGAC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGACCAGAGCCTGCTaGCGCTGCTGCAGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLTRAC*RCCSAC
Trigger: GCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS GCA 90 bp GCTGCACTGATCTGGGCCAGGGCCTCTGCCTTGCGCTCCTGCAGCTaGTGGCTGATGCCCCCGACTAAGGCAATTGCTGCGGACAGCTGT +
Preference number: 5 (lower is better)
Translates to: AALIWARASALRSCS*WLMPPTKAIAADSC
Trigger: ACAGCTGTCCGCAGCAATTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp GGGCCGAGCCCAGGCGCAGTGCCTGCTCTGCAAAGCTGCAGCTACTaGCGATGTGTTCCTGACCCTGGCGCAGTGTGTCCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GPSPGAVPALQSCSY*RCVPDPGAVCPAGF
Trigger: AAAGCCAGCTGGACACACTGCGCCAGGGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp CACCGATCGCCGCAGACCGTCCACCTCAAGGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTCCGGGAAGGCCTGTGCCGCCAATGC +
Preference number: 5 (lower is better)
Translates to: HRSPQTVHLKDQFQL*ILMWPLREGLCRQC
Trigger: GCATTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACGGTCTGCGGCGATCGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp CTTGTCCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTTaGCATGGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LVHWLDLWARAVLPL*HGAHRWLPPLTPAS
Trigger: AGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS CCA 90 bp CAGACCGTCCACCTCAAGGACCAGTTCCAGCTGTGCATTCTCATGTaGCCGCTCCGGGAAGGCCTGTGCCGCCAATGCAGCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: QTVHLKDQFQLCILM*PLREGLCRQCSQPL
Trigger: GAGCGGCTGGCTGCATTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACGGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CCTTCCGTGCGCGCTGTGTACACTAGCTCATATGTGCCATTCTTGTaGTCCACCACTGGCACCGGAAGGCGCGTGCCGTCCGGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: PSVRAVYTSSYVPFL*STTGTGRRVPSGPV
Trigger: CACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCGCTGCAGGGCCGCCTaGTGCTGCTCCACCACATCC +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQRCRAA*CCSTTS
Trigger: GGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGGGCCGCCAGGGGACTaGACACGGCGCTTCACATCG +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQGPPGD*TRRFTS
Trigger: CGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGCATTGAACTGCCCATaGCCCTCGCCATGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPALNCP*PSPWEP
Trigger: TGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACTCCTGTGGGGGCATaGAACTGCCCATTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTPVGA*NCPLPS
Trigger: CGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS GCA 90 bp AATGGTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAACGCTGCACTGATCTGGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: NGLQVADQSLLALLQ*LLQVLERCTDLGQG
Trigger: GCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CAATTGGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCTGGCGCACATGGCTGCCGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: QLGCPFVCRLCCTWS*AYALPSGAHGCRGR
Trigger: GCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTAGGCAAGGAAGAACCTaGGGGCACTGGTACCGATCC +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRQGRT*GHWYRS
Trigger: GGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCGCTGCAGGGCCGCCTaGTGCTGCTCCACCACATCC +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRCRAA*CCSTTS
Trigger: GGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCGCTGCAGGGCCGCCTaGTGCTGCTCCACCACATCC +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSRCRAA*CCSTTS
Trigger: GGATGTGGTGGAGCAGCACAAGGCGGCCCTGCAGCG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCGCTGCTGCAGTGCTaGCTCCAGGTCCTCGAACGC +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQALLQC*LQVLER
Trigger: GCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGGCCGCCAGGGGACTaGACACGGCGCTTCACATCG +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSGPPGD*TRRFTS
Trigger: CGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSTATP*GPMRRP
Trigger: TGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp GCTGCCTCCGGCTCCGGGAAGGGCGGTGTAGTCGGTCTCAGGGATTaGGATGAGACTCCGTCAAGAAAAGGCAGCTGGGGCAGCAGGGAT +
Preference number: 5 (lower is better)
Translates to: AASGSGKGGVVGLRD*DETPSRKGSWGSRD
Trigger: ATCCCTGCTGCCCCAGCTGCCTTTTCTTGACGGAGTCTCATCTCAATCCCTGAGACCGACTACACCGCCCTTCCCGGAGCCGGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS GCA 90 bp CCACAAATGGTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTGCTaGAGTGCTTGCTCCAGGTCCTCGAACGCTGCACTGATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PQMVSRSLTRACLRC*SACSRSSNAALIWA
Trigger: GGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp GCCCCACAAATGGTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGGTCCTCGAACGCTGCACTGATCTGG +
Preference number: 5 (lower is better)
Translates to: APQMVSRSLTRACLR*CSACSRSSNAALIW
Trigger: CCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp GGAGCAGCTCGCCTTCCGTGCGCGCTGTGTACACTAGCTCATATGTaGCATTCTTGTGGTCCACCACTGGCACCGGAAGGCGCGTGCCGT +
Preference number: 5 (lower is better)
Translates to: GAARLPCALCTLAHM*HSCGPPLAPEGACR
Trigger: ACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGGCTGTCCTCCCTCTTaGCCATGGCGCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQGCPPS*PWRPQM
Trigger: CATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCGCTGCTGCAGTGCTaGCTCCAGGTCCTCGAACGC +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHALLQC*LQVLER
Trigger: GCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCGCTCTCGCATGTGCTaGCGCACCAGCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQRSRMC*RTSNTS
Trigger: GGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPSTATP*GPMRRP
Trigger: TGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp CTCCGGCTCCGGGAAGGGCGGTGTAGTCGGTCTCAGGGATTGAGATaGGACTCCGTCAAGAAAAGGCAGCTGGGGCAGCAGGGATTTCGG +
Preference number: 5 (lower is better)
Translates to: LRLREGRCSRSQGLR*DSVKKRQLGQQGFR
Trigger: CCGAAATCCCTGCTGCCCCAGCTGCCTTTTCTTGACGGAGTCTCATCTCAATCCCTGAGACCGACTACACCGCCCTTCCCGGAGCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS GCA 90 bp TTGTTCTGCAGTGCCGAGACGCCCTGCTCTGGGAGGATGGACGTCTaGCGGCATACTGGACAGGATAGCGTCAGGCTCTGGGCAGGGATA +
Preference number: 5 (lower is better)
Translates to: LFCSAETPCSGRMDV*RHTGQDSVRLWAGI
Trigger: TATCCCTGCCCAGAGCCTGACGCTATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp GCCTGCTGCATTGCCTCCATGAGGCTGCTGATGAAGAAGTTGTTCTaGAGTGCCGAGACGCCCTGCTCTGGGAGGATGGACGTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ACCIASMRLLMKKLF*SAETPCSGRMDVCR
Trigger: CCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp GCAGATGCTGCATACCAGGAACTGCTTGTCCATTGGCTGGACCTCTaGGCCAGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATGG +
Preference number: 5 (lower is better)
Translates to: ADAAYQELLVHWLDL*ARAVLPLCHGAHRW
Trigger: CCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGGCTGTCCTCCCTCTTaGCCATGGCGCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHGCPPS*PWRPQM
Trigger: CATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCTGCTGATGAAGAAGTaGTTCTGCAGTGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPLLMKK*FCSAET
Trigger: CGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCCCCGACTAAGGCAATaGCTGCGGACAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQPRLRQ*LRTAVA
Trigger: TGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCGCTGCTGCAGTGCTaGCTCCAGGTCCTCGAACGC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKALLQC*LQVLER
Trigger: GCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCTGACCAGAGCCTGCTaGCGCTGCTGCAGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSLTRAC*RCCSAC
Trigger: GCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAG...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTGCAACACCTTCTGTTaGGCCCCACAAATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPCNTFC*APQMVS
Trigger: GGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTTGTGTCCAGCTGGCTTaGCAACACCTTCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPCVQLA*QHLLFG
Trigger: GCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACA...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCGCTCTCGCATGTGCTaGCGCACCAGCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSRSRMC*RTSNTS
Trigger: GGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSSSAPR*STDRRR
Trigger: TCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSSSAPR*STDRRR
Trigger: TCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRSTATP*GPMRRP
Trigger: TGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS GCA 90 bp TTCTGTTTGGCCCCACAAATGGTCTCCAGGTCGCTGACCAGAGCCTaGTTGCGCTGCTGCAGTGCTTGCTCCAGGTCCTCGAACGCTGCA +
Preference number: 5 (lower is better)
Translates to: FCLAPQMVSRSLTRA*LRCCSACSRSSNAA
Trigger: TGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGGGGCCAAACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CTGTGCCATGCTCACGATGCTCCCCGGCGCGGCACTCACCACACATaGCCGTCTCACAGGCCTCACAGTAAAACTCCATCGTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: LCHAHDAPRRGTHHT*PSHRPHSKTPSSCL
Trigger: AAGGCAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
CDS CCA 90 bp CATCCTCAATTGGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTGCCTTCTGGCGCACATGGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: HPQLGCPFVCRLCCT*SWAYALPSGAHGCR
Trigger: CCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CTGTGCCATGCTCACGATGCTCCCCGGCGCGGCACTCACCACACATaGCCGTCTCACAGGCCTCACAGTAAAACTCCATCGTCTTCATGG +
Preference number: 5 (lower is better)
Translates to: LCHAHDAPRRGTHHT*PSHRPHSKTPSSSW
Trigger: CCATGAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528932.1
ENST00000536344.5
CDS CCA 90 bp CTGTCTGGGCCGCCTGCCTCCTGGAGGCGCCCTTTCCGGCTTCCTTaGAGTGCTCCTATGGAATATGCTAGTCTATCGGCTGACCAGGAA +
Preference number: 5 (lower is better)
Translates to: LSGPPASWRRPFRLP*SAPMEYASLSADQE
Trigger: TTCCTGGTCAGCCGATAGACTAGCATATTCCATAGGAGCACTCCAAGGAAGCCGGAAAGGGCGCCTCCAGGAGGCAGGCGGCCCAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGGCTGTCCTCCCTCTTaGCCATGGCGCCCACAGATG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKGCPPS*PWRPQM
Trigger: CATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCCCGACTAAGGCAATaGCTGCGGACAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPRLRQ*LRTAVA
Trigger: TGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCCCGACTAAGGCAATaGCTGCGGACAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSPRLRQ*LRTAVA
Trigger: TGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCGCTCTCGCATGTGCTaGCGCACCAGCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPRSRMC*RTSNTS
Trigger: GGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCTCTCGCATGTGCTaGCGCACCAGCAACACCTCC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRSRMC*RTSNTS
Trigger: GGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKSSAPR*STDRRR
Trigger: TCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGA +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPSSAPR*STDRRR
Trigger: TCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTCGAGCTCATCCTCAATaGGGTTGTCCTTTCGTTTGC +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPRAHPQ*GCPFVC
Trigger: GCAAACGAAAGGACAACCCAATTGAGGATGAGCTCG...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTATCTTGGTCTTGAACTaGCCCTCAGGGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPILVLN*PSGEKM
Trigger: CATCTTCTCCCCTGAGGGCAAGTTCAAGACCAAGAT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGCATTGAACTGCCCATaGCCCTCGCCATGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHALNCP*PSPWEP
Trigger: TGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACTCCTGTGGGGGCATaGAACTGCCCATTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTPVGA*NCPLPS
Trigger: CGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCACTCCTGTGGGGGCATaGAACTGCCCATTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSTPVGA*NCPLPS
Trigger: CGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTACCTGGATGCGGCTGTaGCCCCAGTCAGCCACAATG +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSTWMRL*PQSATM
Trigger: CATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACCTGGATGCGGCTGTaGCCCCAGTCAGCCACAATG +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTWMRL*PQSATM
Trigger: CATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGCTCTGCACACATCCTaGGGACCACAGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQALHTS*GPQSRL
Trigger: GAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp TCCAACCTGCAACCATCTGTCCCTGCAGGTTTGCAGCCCAGGATCTaGAGCCAATTGCAGAAGGGAGGAGGTCAGAACCAGGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SNLQPSVPAGLQPRI*SQLQKGGGQNQGGA
Trigger: GGCCCCTCCCTGGTTCTGACCTCCTCCCTTCTGCAATTGGCTTCAGATCCTGGGCTGCAAACCTGCAGGGACAGATGGTTGCAGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359518.7
ENST00000528227.5
ENST00000529529.1
CDS TCA 90 bp GCAGAGGGTAGGGCTTTGGAGGAGGATAGGGTGAAGCCCCAGGGCTaGGAACCCCCACCCAGATCTACAGCTACAGCCCAAATCTGCTTC +
Preference number: 5 (lower is better)
Translates to: AEGRALEEDRVKPQG*EPPPRSTATAQICF
Trigger: GAAGCAGATTTGGGCTGTAGCTGTAGATCTGGGTGGGGGTTCTCAGCCCTGGGGCTTCACCCTATCCTCCTCCAAAGCCCTACCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 90 bp CTGGCTGTCCGTAGAGCAGCACCGAGAGGAGCAGCTCGCCTTCCGTaGGCGCTGTGTACACTAGCTCATATGTGCCATTCTTGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: LAVRRAAPRGAARLP*ALCTLAHMCHSCGP
Trigger: TGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CCTTGTGATGCTCACGATGCTCCCCGGCGCGGCACTCACCACACATaGCCGTCTCACAGGCCTCACAGTAAAACTCCATCGTCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: PCDAHDAPRRGTHHT*PSHRPHSKTPSSCL
Trigger: AAGGCAAGACGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639856.1
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTAGGCAAGGAAGAACCTaGGGGCACTGGTACCGATCC +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSRQGRT*GHWYRS
Trigger: GGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGGTCTTGCCTTCATGGTaGGGGCAGGAGAGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRVLPSW*GQERGR
Trigger: CCGCCCTCTCTCCTGCCCCAACCATGAAGGCAAGAC...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCCCCGACTAAGGCAATaGCTGCGGACAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPPRLRQ*LRTAVA
Trigger: TGCCACAGCTGTCCGCAGCAATTGCCTTAGTCGGGG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGACCAGAGCCTGCTaGCGCTGCTGCAGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRLTRAC*RCCSAC
Trigger: GCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGCCCGTCCTTGTCTTaGGTAGTGACAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRPSLS*VVTVSE
Trigger: CTCGCTCACTGTCACTACCAAAGACAAGGACGGGCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTACAATTATGTCTCCATaGGTGTCCACTGCCACACCT +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPTIMSP*VSTATP
Trigger: AGGTGTGGCAGTGGACACCAATGGAGACATAATTGT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGCTCCAATCTTGGTCTaGAACTTGCCCTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQAPILV*NLPSGE
Trigger: CTCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGCATTGAACTGCCCATaGCCCTCGCCATGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPALNCP*PSPWEP
Trigger: TGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCATTGAACTGCCCATaGCCCTCGCCATGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKALNCP*PSPWEP
Trigger: TGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTC +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPSQTL*SNHPNV
Trigger: GACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGCTCTGCACACATCCTaGGGACCACAGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPALHTS*GPQSRL
Trigger: GAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGCTCTGCACACATCCTaGGGACCACAGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKALHTS*GPQSRL
Trigger: GAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTAGGCAAGGAAGAACCTaGGGGCACTGGTACCGATCC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPRQGRT*GHWYRS
Trigger: GGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTGGCAGGGATATAGTTTaGGAGACATCTCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPGRDIV*ETSLTE
Trigger: TTCTGTGAGAGATGTCTCCAAAACTATATCCCTGCC...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCCCGTCCTTGTCTTaGGTAGTGACAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRPSLS*VVTVSE
Trigger: CTCGCTCACTGTCACTACCAAAGACAAGGACGGGCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCGCCCGTCCTTGTCTTaGGTAGTGACAGTGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWRPSLS*VVTVSE
Trigger: CTCGCTCACTGTCACTACCAAAGACAAGGACGGGCG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACCAACCGCCCGTCCTaGTCTTTGGTAGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTNRPS*SLVVTV
Trigger: CACTGTCACTACCAAAGACAAGGACGGGCGGTTGGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGGCCGCCAGGGGACTaGACACGGCGCTTCACATCG +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGPPGD*TRRFTS
Trigger: CGATGTGAAGCGCCGTGTCAAGTCCCCTGGCGGCCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGGGTTGTCCTTTCGTTaGCCGCCTGTGCTGTACATG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHGLSFR*PPVLYM
Trigger: CATGTACAGCACAGGCGGCAAACGAAAGGACAACCC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCGGCCAGCTCCAATCTaGGTCTTGAACTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHRPAPI*VLNLPS
Trigger: TGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCGGCCAGCTCCAATCTaGGTCTTGAACTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQRPAPI*VLNLPS
Trigger: TGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCGGCCAGCTCCAATCTaGGTCTTGAACTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSRPAPI*VLNLPS
Trigger: TGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCG...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWSTATP*GPMRRP
Trigger: TGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CGGGTGCACCCATGCCCACAGCCCACATTCAGTGCTGCCAGGTCTGGCCCACCTAAGACGCAGCAAGACTaGTTGTCGACCACAATGATA +
Preference number: 5 (lower is better)
Translates to: RVHPCPQPTFSAARSGPPKTQQD*LSTTMI
Trigger: TATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTT...AGGTGGGCCAGACCTGGCAGCACTGAATGTGGGCTGTGGGCATGGGTGCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGAAACGGCCAACCAGTTaGCCATTGGGCTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQKRPTS*PLGWKV
Trigger: TACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGCCATGGGAGCCAAACTaGAAGAGGAACTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQPWEPN*KRNSPS
Trigger: CGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGG...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGACCTGGATGCGGCTGTaGCCCCAGTCAGCCACAATG +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRTWMRL*PQSATM
Trigger: CATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGCTTTAAAGCAGTGGTaGCCAGCATCAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSALKQW*PASATT
Trigger: GGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPPSQTL*SNHPNV
Trigger: GACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPSQTL*SNHPNV
Trigger: GACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp CCACGATGCGGCCGCTGCTGGCTGCGGACACACCTTGTAAATTGGTaGATTCACCTTTCTCCCTTCCACGACTGCCAACACGGAAGACGA +
Preference number: 5 (lower is better)
Translates to: PRCGRCWLRTHLVNW*IHLSPFHDCQHGRR
Trigger: TCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp AGACGAGCTCATCCTCAATTGGGTTGTCCTTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCCTACGCACTGCCTTCTGGCGCACAT +
Preference number: 5 (lower is better)
Translates to: RRAHPQLGCPFVCRL*CTWSWAYALPSGAH
Trigger: ATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp AGCCTGAGTGATCTAAGACACACAGGACTGCATCACTCCCCTGCCTaGAATCCTGTGACTCCCCATAGCTCTTGGGAGGAGAGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SLSDLRHTGLHHSPA*NPVTPHSSWEESKP
Trigger: GGGCTTGCTCTCCTCCCAAGAGCTATGGGGAGTCACAGGATTGCAGGCAGGGGAGTGATGCAGTCCTGTGTGTCTTAGATCACTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CCA 90 bp CTCCCTTCCACGACTGCCAACACGGAAGACGAGCTCATCCTCAATTaGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LPSTTANTEDELILN*VVLSFAACAVHGAG
Trigger: CCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 90 bp CTCTGGCTGACCAGCACAGCTCTTGGGTTCTGCAGTGGTCCCCTGTaGCAGGACAGCACTCATCAGTATGAGAAGGGAGATACCATGAGC +
Preference number: 5 (lower is better)
Translates to: LWLTSTALGFCSGPL*QDSTHQYEKGDTMS
Trigger: GCTCATGGTATCTCCCTTCTCATACTGATGAGTGCTGTCCTGCCACAGGGGACCACTGCAGAACCCAAGAGCTGTGCTGGTCAGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCGCTGCTGCAGTGCTaGCTCCAGGTCCTCGAACGC +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWALLQC*LQVLER
Trigger: GCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTGCAACACCTTCTGTTaGGCCCCACAAATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHCNTFC*APQMVS
Trigger: GGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTTGTGTCCAGCTGGCTTaGCAACACCTTCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSCVQLA*QHLLFG
Trigger: GCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACA...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGACCAACCGCCCGTCCTaGTCTTTGGTAGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWTNRPS*SLVVTV
Trigger: CACTGTCACTACCAAAGACAAGGACGGGCGGTTGGT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTCATATGTGCCATTCTaGTGGTCCACCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQSYVPF*WSTTGT
Trigger: GGTGCCAGTGGTGGACCACAAGAATGGCACATATGA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACTCATATGTGCCATTCTaGTGGTCCACCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHSYVPF*WSTTGT
Trigger: GGTGCCAGTGGTGGACCACAAGAATGGCACATATGA...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGGGTTGTCCTTTCGTTaGCCGCCTGTGCTGTACATG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKGLSFR*PPVLYM
Trigger: CATGTACAGCACAGGCGGCAAACGAAAGGACAACCC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGTCATCCTCAATTGGGTaGTCCTTTCGTTTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQSSSIG*SFRLPP
Trigger: AGGCGGCAAACGAAAGGACAACCCAATTGAGGATGA...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACCCCAAAACGGAACTaGAACTGGCCCTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTPKRN*NWPSLE
Trigger: CTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGCTCCAATCTTGGTCTaGAACTTGCCCTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWAPILV*NLPSGE
Trigger: CTCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGGCCAGCTCCAATCTaGGTCTTGAACTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRPAPI*VLNLPS
Trigger: TGAGGGCAAGTTCAAGACCAAGATTGGAGCTGGCCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGCCAACCAGTTTGCCATaGGGCTGGAAGGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQPTSLP*GWKVKT
Trigger: CGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGG...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCAACCAGTTTGCCATaGGGCTGGAAGGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPTSLP*GWKVKT
Trigger: CGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCAAACGGCCAACCAGTTaGCCATTGGGCTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSKRPTS*PLGWKV
Trigger: TACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGCTTTAAAGCAGTGGTaGCCAGCATCAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWALKQW*PASATT
Trigger: GGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGC...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACCCCTTTCCGGCTTCCTaGGAGTGCTCCTATGGAATA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHPFPAS*ECSYGI
Trigger: TATTCCATAGGAGCACTCCAAGGAAGCCGGAAAGGG...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS GCA 90 bp CAACACGGAAGACGAGCTCATCCTCAATTGGGTTGTCCTTTCGTTTaGCGCCTGTGCTGTACATGGAGCTGGGCCTACGCACTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: QHGRRAHPQLGCPFV*RLCCTWSWAYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 90 bp GCCATCCGAGGTCAGTGCCAGGCCCTGTGGACCATACAGTGGTTCTaGAGATGTGTTGATATAGGACAGGAAGGAGCCAGAGCTGTCGAA +
Preference number: 5 (lower is better)
Translates to: AIRGQCQALWTIQWF*RCVDIGQEGARAVE
Trigger: TTCGACAGCTCTGGCTCCTTCCTGTCCTATATCAACACATCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCACTGACCTCGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000532542.1
ENST00000533064.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCACACCAGCCTCGCGTaGGAACAGGATGCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWHTSLA*EQDARA
Trigger: TGCCCTCGCATCCTGTTCCAACGCGAGGCTGGTGTG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCTGCTGATGAAGAAGTaGTTCTGCAGTGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPLLMKK*FCSAET
Trigger: CGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCTGACCAGAGCCTGCTaGCGCTGCTGCAGTGCTTGC +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLTRAC*RCCSAC
Trigger: GCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGTGTCCAGCTGGCTTaGCAACACCTTCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPCVQLA*QHLLFG
Trigger: GCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACA...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGTCATCCTCAATTGGGTaGTCCTTTCGTTTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQSSSIG*SFRLPP
Trigger: AGGCGGCAAACGAAAGGACAACCCAATTGAGGATGA...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTACCCCAAAACGGAACTaGAACTGGCCCTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPTPKRN*NWPSLE
Trigger: CTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGT...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGACCCCAAAACGGAACTaGAACTGGCCCTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWTPKRN*NWPSLE
Trigger: CTCCAATGAGGGCCAGTTCAAGTTCCGTTTTGGGGT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAACCAGTTTGCCATaGGGCTGGAAGGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKPTSLP*GWKVKT
Trigger: CGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTCCATGGGAGCCAAACTaGAAGAGGAACTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPPWEPN*KRNSPS
Trigger: CGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGG...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGCCATGGGAGCCAAACTaGAAGAGGAACTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWPWEPN*KRNSPS
Trigger: CGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGG...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGGGGTCCTTTCCGCGTaGGAACAGGATGCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWGVLSA*EQDARA
Trigger: TGCCCTCGCATCCTGTTCCAACGCGGAAAGGACCCC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000359518.7
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGTTTGGAGACATCGCGTaGGAACAGGATGCGAGGGCA +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRFGDIA*EQDARA
Trigger: TGCCCTCGCATCCTGTTCCAACGCGATGTCTCCAAA...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536344.5
CDS CCA 90 bp GGAGCAGCCTTGGAGAACTCAAGTTCTGGGCATTGGCCTTGCTCTTaGATTCAAATCTGTGCCTTCCTTAATGGACTGGTCTCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: GAALENSSSGHWPCS*IQICAFLNGLVSPP
Trigger: GGGCGGGGAGACCAGTCCATTAAGGAAGGCACAGATTTGAATCCAAGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAAGGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCATACCAGGAACTGCTaGTCCATTGGCTGGACCTCT +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRHTRNC*SIGWTS
Trigger: AGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGGGCAGGGATATAGTTTaGGAGACATCTCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQGRDIV*ETSLTE
Trigger: TTCTGTGAGAGATGTCTCCAAAACTATATCCCTGCC...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGTCATCCTCAATTGGGTaGTCCTTTCGTTTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKSSSIG*SFRLPP
Trigger: AGGCGGCAAACGAAAGGACAACCCAATTGAGGATGA...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGAGCTCATCCTCAATaGGGTTGTCCTTTCGTTTGC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKRAHPQ*GCPFVC
Trigger: GCAAACGAAAGGACAACCCAATTGAGGATGAGCTCG...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCACAATTATGTCTCCATaGGTGTCCACTGCCACACCT +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSTIMSP*VSTATP
Trigger: AGGTGTGGCAGTGGACACCAATGGAGACATAATTGT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACAATTATGTCTCCATaGGTGTCCACTGCCACACCT +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTIMSP*VSTATP
Trigger: AGGTGTGGCAGTGGACACCAATGGAGACATAATTGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGATCTTGGTCTTGAACTaGCCCTCAGGGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKILVLN*PSGEKM
Trigger: CATCTTCTCCCCTGAGGGCAAGTTCAAGACCAAGAT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCTCCAATCTTGGTCTaGAACTTGCCCTCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSAPILV*NLPSGE
Trigger: CTCCCCTGAGGGCAAGTTCAAGACCAAGATTGGAGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCTGTTCTGGCCCCAGAAGACGCAGCAAGACTaGTTGTCGACCACAATGATA +
Preference number: 5 (lower is better)
Translates to: VGRQLEGLLSWGRLFWPQKTQQD*LSTTMI
Trigger: TATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTT...CTGGGGCCAGAACAGCCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAAACGGCCAACCAGTTaGCCATTGGGCTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRKRPTS*PLGWKV
Trigger: TACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGACCTGGATGCGGCTGTaGCCCCAGTCAGCCACAATG +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWTWMRL*PQSATM
Trigger: CATTGTGGCTGACTGGGGCAACAGCCGCATCCAGGT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGCTTTAAAGCAGTGGTaGCCAGCATCAGCCACCACC +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSALKQW*PASATT
Trigger: GGTGGTGGCTGATGCTGGCAACCACTGCTTTAAAGC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGGCTCTGCACACATCCTaGGGACCACAGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWALHTS*GPQSRL
Trigger: GAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGC...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGGGCAGGGATATAGTTTaGGAGACATCGCGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKGRDIV*ETSRWN
Trigger: GTTCCAACGCGATGTCTCCAAAACTATATCCCTGCC...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536344.5
CDS TCA 90 bp AGTGAACAGATTGTAAAAGGCACAAAGTCCAGTATGGGCACCACTTaGGGACTTGTCCAGTGTGGCTGGACTGCAGGGAGCACCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SEQIVKGTKSSMGTT*GLVQCGWTAGSTQV
Trigger: CACCTGGGTGCTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAGTGGTGCCCATACTGGACTTTGTGCCTTTTACAATCTGTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CCA 90 bp TTTGGAGACATCTCTCACAGAAGGTGTGCAGGCAAGGAAGAACCTTaGGGCACTGGTACCGATCCAGGCAGATGCTGCATACCAGGAACT +
Preference number: 5 (lower is better)
Translates to: FGDISHRRCAGKEEP*GTGTDPGRCCIPGT
Trigger: AGTTCCTGGTATGCAGCATCTGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACCTTCTGTGAGAGATGTCTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACGGCAGGGATATAGTTTaGGAGACATCTCTCACAGAA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHGRDIV*ETSLTE
Trigger: TTCTGTGAGAGATGTCTCCAAAACTATATCCCTGCC...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCTGCTGATGAAGAAGTaGTTCTGCAGTGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSLLMKK*FCSAET
Trigger: CGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGCAACACCTTCTGTTaGGCCCCACAAATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCNTFC*APQMVS
Trigger: GGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTGTGTCCAGCTGGCTTaGCAACACCTTCTGTTTGGC +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSCVQLA*QHLLFG
Trigger: GCCAAACAGAAGGTGTTGCAAAGCCAGCTGGACACA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTTCATATGTGCCATTCTaGTGGTCCACCACTGGCACC +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSSYVPF*WSTTGT
Trigger: GGTGCCAGTGGTGGACCACAAGAATGGCACATATGA...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGCGAGCTCATCCTCAATaGGGTTGTCCTTTCGTTTGC +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRRAHPQ*GCPFVC
Trigger: GCAAACGAAAGGACAACCCAATTGAGGATGAGCTCG...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGATCTTGGTCTTGAACTaGCCCTCAGGGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRILVLN*PSGEKM
Trigger: CATCTTCTCCCCTGAGGGCAAGTTCAAGACCAAGAT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCACGCAGCAAGACTTGTaGTCGACCACAATGATATGT +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSTQQDL*STTMIC
Trigger: ACATATCATTGTGGTCGACAACAAGTCTTGCTGCGT...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACGCAGCAAGACTTGTaGTCGACCACAATGATATGT +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTQQDL*STTMIC
Trigger: ACATATCATTGTGGTCGACAACAAGTCTTGCTGCGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTACGCAGCAAGACTTGTaGTCGACCACAATGATATGT +
Preference number: 5 (lower is better)
Translates to: GRVKLCTHPWDHSPGSPSTQQDL*STTMIC
Trigger: ACATATCATTGTGGTCGACAACAAGTCTTGCTGCGT...ACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACAAGACGCAGCAAGACTaGTTGTCGACCACAATGATA +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHKTQQD*LSTTMI
Trigger: TATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAACCAGTTTGCCATaGGGCTGGAAGGTAAAGACG +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSPTSLP*GWKVKT
Trigger: CGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGG...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCCCAGCCAGACCCTCTaGTCCAATCACCCCAATGTC +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWPSQTL*SNHPNV
Trigger: GACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS GCA 90 bp GAGCCAGGAGCAGCCTTGGAGAACTCAAGTTCTGGGCATTGGCCTTaGTCTTGGATTCAAATCTGTGCCTTCCTTAATGGACTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: EPGAALENSSSGHWP*SWIQICAFLNGLVS
Trigger: GGAGACCAGTCCATTAAGGAAGGCACAGATTTGAATCCAAGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAAGGCTGCTCCTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 90 bp TCCAGTTTGAGCAGCTCAGGTTCTGGCTCAATACTGATGAGGCTTTaGGATGTCTTGTTCTTCCAGTCCCAGCCTATCCCACCCCTGACA +
Preference number: 5 (lower is better)
Translates to: SSLSSSGSGSILMRL*DVLFFQSQPIPPLT
Trigger: TGTCAGGGGTGGGATAGGCTGGGACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACCTGAGCTGCTCAAACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGACCAACCGCCCGTCCTaGTCTTTGGTAGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWTNRPS*SLVVTV
Trigger: CACTGTCACTACCAAAGACAAGGACGGGCGGTTGGT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGGACACACCTTGTAAATaGGTGAATTCACCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQDTPCK*VNSPFS
Trigger: GGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTC...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCGACACACCTTGTAAATaGGTGAATTCACCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: PPSQTLLSNHPNVCPSTSDTPCK*VNSPFS
Trigger: GGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTC...GCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGACGCAGCAAGACTTGTaGTCGACCACAATGATATGT +
Preference number: 5 (lower is better)
Translates to: RGGEVCKKGRVKLCTHPWTQQDL*STTMIC
Trigger: ACATATCATTGTGGTCGACAACAAGTCTTGCTGCGT...CCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp CTGCAAAAGATTGATCTTCCTGTCTCAGTCTTGCCTCAGCCTGAGTaGTCTAAGACACACAGGACTGCATCACTCCCCTGCCTGCAATCC +
Preference number: 5 (lower is better)
Translates to: LQKIDLPVSVLPQPE*SKTHRTASLPCLQS
Trigger: GGATTGCAGGCAGGGGAGTGATGCAGTCCTGTGTGTCTTAGATCACTCAGGCTGAGGCAAGACTGAGACAGGAAGATCAATCTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS TCA 90 bp TGGGTTCTGCAGTGGTCCCCTGTGGCAGGACAGCACTCATCAGTATaGGAAGGGAGATACCATGAGCTCCACGAGCTAAATAGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: WVLQWSPVAGQHSSV*EGRYHELHELNSRS
Trigger: ACTTCTACTATTTAGCTCGTGGAGCTCATGGTATCTCCCTTCTCATACTGATGAGTGCTGTCCTGCCACAGGGGACCACTGCAGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 90 bp GCCCCACCCCAACTCCATCTCTTAGTCCTGCAGGGCTGTTTAAACTaGTCCCACCAACAGGCATCACTTTCTTCTAATGTGGACCTTCTA +
Preference number: 5 (lower is better)
Translates to: APPQLHLLVLQGCLN*SHQQASLSSNVDLL
Trigger: TAGAAGGTCCACATTAGAAGAAAGTGATGCCTGTTGGTGGGACCAGTTTAAACAGCCCTGCAGGACTAAGAGATGGAGTTGGGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 90 bp GAACGAGAGCCAGGAGCAGCCTTGGAGAACTCAAGTTCTGGGCATTaGCCTTGCTCTTGGATTCAAATCTGTGCCTTCCTTAATGGACTG +
Preference number: 5 (lower is better)
Translates to: EREPGAALENSSSGH*PCSWIQICAFLNGL
Trigger: CAGTCCATTAAGGAAGGCACAGATTTGAATCCAAGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAAGGCTGCTCCTGGCTCTCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 90 bp TATAGGCTCTGGGGACACAAGATGAACGAGAGCCAGGAGCAGCCTTaGAGAACTCAAGTTCTGGGCATTGGCCTTGCTCTTGGATTCAAA +
Preference number: 5 (lower is better)
Translates to: YRLWGHKMNESQEQP*RTQVLGIGLALGFK
Trigger: TTTGAATCCAAGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAAGGCTGCTCCTGGCTCTCGTTCATCTTGTGTCCCCAGAGCCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCTGCTGATGAAGAAGTaGTTCTGCAGTGCCGAGACG +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWLLMKK*FCSAET
Trigger: CGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGTGCAACACCTTCTGTTaGGCCCCACAAATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWCNTFC*APQMVS
Trigger: GGAGACCATTTGTGGGGCCAAACAGAAGGTGTTGCA...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp GACAGGGGTGGGGAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTGACACACCTTGTAAATaGGTGAATTCACCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DRGGEVCKKGRVKLCTHPDTPCK*VNSPFS
Trigger: GGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTC...AGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTCCCCACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGTGTGTATAGGGTGGTAGGGAGACAACTAGAGGGACTCCTGTCCTGGGGTAGGAAGACGCAGCAAGACTaGTTGTCGACCACAATGATA +
Preference number: 5 (lower is better)
Translates to: SVYRVVGRQLEGLLSWGRKTQQD*LSTTMI
Trigger: TATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTT...CCTACCCCAGGACAGGAGTCCCTCTAGTTGTCTCCCTACCACCCTATACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGAAACGGCCAACCAGTTaGCCATTGGGCTGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWKRPTS*PLGWKV
Trigger: TACCTTCCAGCCCAATGGCAAACTGGTTGGCCGTTT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGCCATGGGAGCCAAACTaGAAGAGGAACTCTCCATCG +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWPWEPN*KRNSPS
Trigger: CGATGGAGAGTTCCTCTTCAAGTTTGGCTCCCATGG...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS GCA 90 bp TCGGTGTCCCCTTCTAAGGATGTAAGCCTCGCATGGCATAAGGACTaGATCTGTTTTGTTTGCTGCTGCACTTGCAGCACTGATATGGCA +
Preference number: 5 (lower is better)
Translates to: SVSPSKDVSLAWHKD*ICFVCCCTCSTDMA
Trigger: TGCCATATCAGTGCTGCAAGTGCAGCAGCAAACAAAACAGATGCAGTCCTTATGCCATGCGAGGCTTACATCCTTAGAAGGGGACACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 90 bp TTTAGCGGTGAGGTAATGCCCCTCCAGTTTGAGCAGCTCAGGTTCTaGCTCAATACTGATGAGGCTTTGGGATGTCTTGTTCTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: FSGEVMPLQFEQLRF*LNTDEALGCLVLPV
Trigger: GACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACCTGAGCTGCTCAAACTGGAGGGGCATTACCTCACCGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp GCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGCCAGGCAGACAATTTCATTCTTGTaGTTCACAGCCACAAAATGG +
Preference number: 5 (lower is better)
Translates to: ARPSCPITPMSVPPQARQTISFL*FTATKW
Trigger: CCATTTTGTGGCTGTGAACAACAAGAATGAAATTGT...CTGCCTGGCTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp AGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTCCAGGCTCACCCAGTCACACAATTTCATTCTTGTaGTTCACAGCCACAAAATGG +
Preference number: 5 (lower is better)
Translates to: RVKLCTHPWDHSPGSPSHTISFL*FTATKW
Trigger: CCATTTTGTGGCTGTGAACAACAAGAATGAAATTGT...GTGACTGGGTGAGCCTGGACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp CTTGAGGACTTGTCCAGTGTGGCTGGACTGCAGGGAGCACCCAGGTaGACAAAAGAAGGAATTATGTTTTATCCTGGGTGTAATGAGGAG +
Preference number: 5 (lower is better)
Translates to: LEDLSSVAGLQGAPR*TKEGIMFYPGCNEE
Trigger: CTCCTCATTACACCCAGGATAAAACATAATTCCTTCTTTTGTTCACCTGGGTGCTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CCA 90 bp GGATGTCTTGTTCTTCCAGTCCCAGCCTATCCCACCCCTGACACCTaGCCAACTCTTACTCATCTTTCCATTCTTAGAATTTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GCLVLPVPAYPTPDT*PTLTHLSILRISRS
Trigger: TGACCTGGAAATTCTAAGAATGGAAAGATGAGTAAGAGTTGGCCAGGTGTCAGGGGTGGGATAGGCTGGGACTGGAAGAACAAGACATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS-3UTR CAA 90 bp GAGGTGTGTAAGAAGGGTAGGGTGAAGCTCTGCACACATCCTTGGGACCACAGTGACACACCTTGTAAATaGGTGAATTCACCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: EVCKKGRVKLCTHPWDHSDTPCK*VNSPFS
Trigger: GGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTC...ACTGTGGTCCCAAGGATGTGTGCAGAGCTTCACCCTACCCTTCTTACACACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp CCAGGCTCACCCAGTCACCAAAGCAAGAACCGAATAAATAAAGTGCAACCGTGGACAATTATGTCTCCATaGGTGTCCACTGCCACACCT +
Preference number: 5 (lower is better)
Translates to: PGSPSHQSKNRINKVQPWTIMSP*VSTATP
Trigger: AGGTGTGGCAGTGGACACCAATGGAGACATAATTGT...CCACGGTTGCACTTTATTTATTCGGTTCTTGCTTTGGTGACTGGGTGAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS-3UTR CAA 90 bp ACCTCCCAGCCAGACCCTCTTGTCCAATCACCCCAATGTCTGTCCCTCCACAAGACAATTTCATTCTTGTaGTTCACAGCCACAAAATGG +
Preference number: 5 (lower is better)
Translates to: TSQPDPLVQSPQCLSLHKTISFL*FTATKW
Trigger: CCATTTTGTGGCTGTGAACAACAAGAATGAAATTGT...CTTGTGGAGGGACAGACATTGGGGTGATTGGACAAGAGGGTCTGGCTGGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
CDS TCA 90 bp GAGGAAAGGATGTTGGGACAGTGGTCACGGAGGGAGGGAAGACACTaGCCTTCACTGAATGGTTATGGAAGTCCGTTACTACAATTTCAT +
Preference number: 5 (lower is better)
Translates to: EERMLGQWSRREGRH*PSLNGYGSPLLQFH
Trigger: ATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGTCAGTGTCTTCCCTCCCTCCGTGACCACTGTCCCAACATCCTTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530724.1
ENST00000532542.1
CDS TCA 90 bp ATTCAGGCTATGGGGCTGACAAGGAAACCTTCCTCCTACACAGAGTaGACCTTTCAACCTCTCCCTTCTCCAACCTCCTCTAATTTAGCT +
Preference number: 5 (lower is better)
Translates to: IQAMGLTRKPSSYTE*TFQPLPSPTSSNLA
Trigger: AGCTAAATTAGAGGAGGTTGGAGAAGGGAGAGGTTGAAAGGTTCACTCTGTGTAGGAGGAAGGTTTCCTTGTCAGCCCCATAGCCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS GCA 90 bp GTCTTTCTCACGGTCCAGGCTCACATCATTTCTCATCTGGATCACTaGAAAAGATTGATCTTCCTGTCTCAGTCTTGCCTCAGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: VFLTVQAHIISHLDH*KRLIFLSQSCLSLS
Trigger: ACTCAGGCTGAGGCAAGACTGAGACAGGAAGATCAATCTTTTGCAGTGATCCAGATGAGAAATGATGTGAGCCTGGACCGTGAGAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS TCA 90 bp ACCAAATTCGGCCAGGAAAGGAAGAGGAAAGGCATTCAAGCAGAGTaGACAGATTGTAAAAGGCACAAAGTCCAGTATGGGCACCACTTG +
Preference number: 5 (lower is better)
Translates to: TKFGQERKRKGIQAE*TDCKRHKVQYGHHL
Trigger: CAAGTGGTGCCCATACTGGACTTTGTGCCTTTTACAATCTGTTCACTCTGCTTGAATGCCTTTCCTCTTCCTTTCCTGGCCGAATTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS TCA 90 bp GGAGGTAGGCTCATGAGACTTAGTAGCAGACTGGAATGGGGTAGGTaGGAGAGGAGAAAGTATACAAGAATTAGTCCATTCAGGCTATGG +
Preference number: 5 (lower is better)
Translates to: GGRLMRLSSRLEWGR*ERRKYTRISPFRLW
Trigger: CCATAGCCTGAATGGACTAATTCTTGTATACTTTCTCCTCTCTCACCTACCCCATTCCAGTCTGCTACTAAGTCTCATGAGCCTACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS TCA 90 bp TGTTGGGACAGTGGTCACGGAGGGAGGGAAGACACTGACCTTCACTaGATGGTTATGGAAGTCCGTTACTACAATTTCATTCTTGTTGTT +
Preference number: 5 (lower is better)
Translates to: CWDSGHGGREDTDLH*MVMEVRYYNFILVV
Trigger: AACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGTCAGTGTCTTCCCTCCCTCCGTGACCACTGTCCCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530724.1
ENST00000532542.1
CDS TCA 90 bp TTTAATTCCCACTTGTGCTTGAGGTCCTCCTCATATAGTCTTTCCTaGATCATACACTTCTGTATCCCTTCCCACAGTTCCCTGCACCTT +
Preference number: 5 (lower is better)
Translates to: FNSHLCLRSSSYSLS*IIHFCIPSHSSLHL
Trigger: AAGGTGCAGGGAACTGTGGGAAGGGATACAGAAGTGTATGATTCAGGAAAGACTATATGAGGAGGACCTCAAGCACAAGTGGGAATTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530724.1
ENST00000532542.1
ENST00000533064.1
CDS TCA 90 bp TACTACAATTTCATTCTTGTTGTTCACAGCCACAAAATGGGGCCCTaGAAATACAAAGTGGTCTTCAGGGCAGTAAGCTGGGATGCTGAG +
Preference number: 5 (lower is better)
Translates to: YYNFILVVHSHKMGP*KYKVVFRAVSWDAE
Trigger: CTCAGCATCCCAGCTTACTGCCCTGAAGACCACTTTGTATTTTCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS GCA 90 bp GTCTTTCCTGAATCATACACTTCTGTATCCCTTCCCACAGTTCCCTaGACCTTCCTATCACAGAATCTATTACATCATATTGTAATTTTT +
Preference number: 5 (lower is better)
Translates to: VFPESYTSVSLPTVP*TFLSQNLLHHIVIF
Trigger: AAAAATTACAATATGATGTAATAGATTCTGTGATAGGAAGGTGCAGGGAACTGTGGGAAGGGATACAGAAGTGTATGATTCAGGAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530724.1
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp GGTCCCCCGGACGCAGGGCACGCACGCGGAAGGGGCTaGCGCGCACTGGCTGTCCGTAGAGCAGCACCGAGA +
Preference number: 6 (lower is better)
Translates to: GPPDAGHARGRG*RALAVRRAAPR
Trigger: TCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGTCCGGGGGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp CCAGAGGGGTCCTTTCCTCCTGCGGACGCTGCCTCCTaGGTGCTGCTAGGGAGCCGGCGGGCCGGCGAGCCG +
Preference number: 6 (lower is better)
Translates to: PEGSFPPADAAS*VLLGSRRAGEP
Trigger: CGGCTCGCCGGCCCGCCGGCTCCCTAGCAGCACCAAGGAGGCAGCGTCCGCAGGAGGAAAGGACCCCTCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529529.1
CDS CAA 72 bp CCACTCACACCAGCCTCTCCTGCGGACGCTGCCTCCTaGGTGCTGCTAGGGAGCCGGCGGGCCGGCGAGCCG +
Preference number: 6 (lower is better)
Translates to: PLTPASPADAAS*VLLGSRRAGEP
Trigger: CGGCTCGCCGGCCCGCCGGCTCCCTAGCAGCACCAAGGAGGCAGCGTCCGCAGGAGAGGCTGGTGTGAGTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS TCA 72 bp CCACTGGCACCGGAAGGCGCGTGCCGTCCGGGCCGGTaGTCTCTGCACGCAGCTCAGCGCTGCCTGTGCGCA +
Preference number: 6 (lower is better)
Translates to: PLAPEGACRPGR*SLHAAQRCLCA
Trigger: TGCGCACAGGCAGCGCTGAGCTGCGTGCAGAGATCACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS TCA 72 bp CAGGATGCGAGGGCAAAGCTCGGACTGCGGCCACTCTaGAGGGCCCGCGGCGCTGCTACTGCTGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: QDARAKLGLRPL*RARGAATAASA
Trigger: GGCGCTGGCAGCAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
CDS GCA 72 bp GCCTGTGCCGCCAATGCAGCCAGCCGCTCTCGCATGTaGTTGCGCACCAGCAACACCTCCGGGGCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: ACAANAASRSRM*LRTSNTSGAEP
Trigger: GGGCTCGGCCCCGGAGGTGTTGCTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp ACGCAGGGCACGCACGCGGAAGGGGCTGCCGCGCACTaGCTGTCCGTAGAGCAGCACCGAGAGGAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: TQGTHAEGAAAH*LSVEQHREEQL
Trigger: GAGCTGCTCCTCTCGGTGCTGCTCTACGGACAGCCAGTGCGCGGCAGCCCCTTCCGCGTGCGTGCCCTGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp ATGGAGCTGGGCCTACGCACTGCCTTCTGGCGCACATaGCTGCCGGGGCCGCCAGGGGACTTGACACGGCGC +
Preference number: 6 (lower is better)
Translates to: MELGLRTAFWRT*LPGPPGDLTRR
Trigger: GCGCCGTGTCAAGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CGGATCCCGGATCTCGGATCCCGGATCTCCGCCAGCTaGCTCCGGCTCCGGGAAGGGCGGTGTAGTCGGTCT +
Preference number: 6 (lower is better)
Translates to: RIPDLGSRISAS*LRLREGRCSRS
Trigger: AGACCGACTACACCGCCCTTCCCGGAGCCGGAGGCAGCTGGCGGAGATCCGGGATCCGAGATCCGGGATCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CCA 72 bp GTGACAGTGAGCGAGGCAGGCTGGCCCACTAGCGCCTaGCGCAGGCCCTCTCCCGTGGCCACCGTTTCGTGT +
Preference number: 6 (lower is better)
Translates to: VTVSEAGWPTSA*RRPSPVATVSC
Trigger: ACACGAAACGGTGGCCACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACTGTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp GGACTTGACACGGCGCTTCACATCGTCCGGGGAAGGTaGCAGGTCCCCCGGACGCAGGGCACGCACGCGGAA +
Preference number: 6 (lower is better)
Translates to: GLDTALHIVRGR*QVPRTQGTHAE
Trigger: TTCCGCGTGCGTGCCCTGCGTCCGGGGGACCTGCCACCTTCCCCGGACGATGTGAAGCGCCGTGTCAAGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp TGGGGCAGCAGGGATTTCGGACTCTGGGAGCCTGTCTaGGCCGCCTGCCTCCTGGAGGCGCCCTTTCCGGCT +
Preference number: 6 (lower is better)
Translates to: WGSRDFGLWEPV*AACLLEAPFPA
Trigger: AGCCGGAAAGGGCGCCTCCAGGAGGCAGGCGGCCCAGACAGGCTCCCAGAGTCCGAAATCCCTGCTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS GCA 72 bp GTCCTCGAACGCTGCACTGATCTGGGCCAGGGCCTCTaGCTTGCGCTCCTGCAGCTGCTGGCTGATGCCCCC +
Preference number: 6 (lower is better)
Translates to: VLERCTDLGQGL*LALLQLLADAP
Trigger: GGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CTCATGTGGCCGCTCCGGGAAGGCCTGTGCCGCCAATaGAGCCAGCCGCTCTCGCATGTGCTTGCGCACCAG +
Preference number: 6 (lower is better)
Translates to: LMWPLREGLCRQ*SQPLSHVLAHQ
Trigger: CTGGTGCGCAAGCACATGCGAGAGCGGCTGGCTGCATTGGCGGCACAGGCCTTCCCGGAGCGGCCACATGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CCGCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCCGCGGCGCTGCTACTG +
Preference number: 6 (lower is better)
Translates to: PRWNRMRGQSSD*GHSEGPAALLL
Trigger: CAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359518.7
ENST00000528227.5
CDS CCA 72 bp GTGCTGTACATGGAGCTGGGCCTACGCACTGCCTTCTaGCGCACATGGCTGCCGGGGCCGCCAGGGGACTTG +
Preference number: 6 (lower is better)
Translates to: VLYMELGLRTAF*RTWLPGPPGDL
Trigger: CAAGTCCCCTGGCGGCCCCGGCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp GGCACTGTACACCTGGCGGGGGAAGGGGCTAGGGACTaGGGACCTGGCCTCAGGCAGAGGGTAGGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: GTVHLAGEGARD*GPGLRQRVGLW
Trigger: CCAAAGCCCTACCCTCTGCCTGAGGCCAGGTCCCCAGTCCCTAGCCCCTTCCCCCGCCAGGTGTACAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp TCGCGTTGGAACAGGATGCGAGGGCAAAGCTCGGACTaGGGCCACTCTGAAGGGCCCGCGGCGCTGCTACTG +
Preference number: 6 (lower is better)
Translates to: SRWNRMRGQSSD*GHSEGPAALLL
Trigger: CAGTAGCAGCGCCGCGGGCCCTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345851.8
ENST00000528932.1
ENST00000536344.5
CDS GCA 72 bp GCGCTGCTGCAGTGCTTGCTCCAGGTCCTCGAACGCTaGACTGATCTGGGCCAGGGCCTCTGCCTTGCGCTC +
Preference number: 6 (lower is better)
Translates to: ALLQCLLQVLER*TDLGQGLCLAL
Trigger: GAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CACCTCCGGGGCCGAGCCCAGGCGCAGTGCCTGCTCTaGAAAGCTGCAGCTACTGCCGATGTGTTCCTGACC +
Preference number: 6 (lower is better)
Translates to: HLRGRAQAQCLL*KAAATADVFLT
Trigger: GGTCAGGAACACATCGGCAGTAGCTGCAGCTTTGCAGAGCAGGCACTGCGCCTGGGCTCGGCCCCGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp AGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATaGCTCCCGCCACTCACACCAGCCTCTCCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: RAVLPLCHGAHR*LPPLTPASPWG
Trigger: ACCCCAGGGAGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359518.7
ENST00000528227.5
ENST00000529529.1
CDS CCA 72 bp AGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATaGCTCCCGCCACTCACACCAGCCTCTCCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: RAVLPLCHGAHR*LPPLTPASPAD
Trigger: GTCCGCAGGAGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525074.5
CDS CCA 72 bp CTCCCTTCCACGACTGCCATTCTTGTGGTCCACCACTaGCACCGGAAGGCGCGTGCCGTCCGGGCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: LPSTTAILVVHH*HRKARAVRAGD
Trigger: ATCACCGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCAGTCGTGGAAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529058.1
CDS CAA 90 bp GCTTGTCCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTaGCCATGGCGCCCACAGATGGCTCCCGCCACTCACACCAGCCTC +
Preference number: 6 (lower is better)
Translates to: ACPLAGPLGQGCPPS*PWRPQMAPATHTSL
Trigger: GAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS CAA 90 bp GGTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTGCTGCAGTGCTaGCTCCAGGTCCTCGAACGCTGCACTGATCTGGGCCAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: GLQVADQSLLALLQC*LQVLERCTDLGQGL
Trigger: GAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp ACCACATCCCTCAGCAGCACTGTGCCATGCTCACGATaGTCCCCGGCGCGGCACTCACCACACATGGCCGTC +
Preference number: 6 (lower is better)
Translates to: TTSLSSTVPCSR*SPARHSPHMAV
Trigger: GACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGGATGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
CDS GCA 72 bp TGCTGCTCCACCACATCCCTCAGCAGCACTGTGCCATaGTCACGATGCTCCCCGGCGCGGCACTCACCACAC +
Preference number: 6 (lower is better)
Translates to: CCSTTSLSSTVP*SRCSPARHSPH
Trigger: GTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGCATGGCACAGTGCTGCTGAGGGATGTGGTGGAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
CDS GCA 72 bp ATCTGGGCCAGGGCCTCTGCCTTGCGCTCCTGCAGCTaGTGGCTGATGCCCCCGACTAAGGCAATTGCTGCG +
Preference number: 6 (lower is better)
Translates to: IWARASALRSCS*WLMPPTKAIAA
Trigger: CGCAGCAATTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CACCGTTTCGTGTGCAGTGGCGCTCGTGGTGAGCAGTaGGCCCAGATTGAGCACCGATCGCCGCAGACCGTC +
Preference number: 6 (lower is better)
Translates to: HRFVCSGARGEQ*AQIEHRSPQTV
Trigger: GACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAAACGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp AGGGCTGTCCTCCCTCTTTGCCATGGCGCCCACAGATaGCTCCCGCCACTCACACCAGCCTCGCGTTGGAAC +
Preference number: 6 (lower is better)
Translates to: RAVLPLCHGAHR*LPPLTPASRWN
Trigger: GTTCCAACGCGAGGCTGGTGTGAGTGGCGGGAGCCATCTGTGGGCGCCATGGCAAAGAGGGAGGACAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS CCA 72 bp TCCTTGTCTTTGGTAGTGACAGTGAGCGAGGCAGGCTaGCCCACTAGCGCCTGGCGCAGGCCCTCTCCCGTG +
Preference number: 6 (lower is better)
Translates to: SLSLVVTVSEAG*PTSAWRRPSPV
Trigger: CACGGGAGAGGGCCTGCGCCAGGCGCTAGTGGGCCAGCCTGCCTCGCTCACTGTCACTACCAAAGACAAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp TGTGCAGTGGCGCTCGTGGTGAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGACCGTCCACCTCAAGG +
Preference number: 6 (lower is better)
Translates to: CAVALVVSSAPR*STDRRRPSTSR
Trigger: CCTTGAGGTGGACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp GCGCTGCCTGTGCGCACCAACCGCCCGTCCTTGTCTTaGGTAGTGACAGTGAGCGAGGCAGGCTGGCCCACT +
Preference number: 6 (lower is better)
Translates to: ALPVRTNRPSLS*VVTVSEAGWPT
Trigger: AGTGGGCCAGCCTGCCTCGCTCACTGTCACTACCAAAGACAAGGACGGGCGGTTGGTGCGCACAGGCAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TCGCCTTCCGTGCGCGCTGTGTACACTAGCTCATATGTGCCATTCTaGTGGTCCACCACTGGCACCGGAAGGCGCGTGCCGTCCGGGCCG +
Preference number: 6 (lower is better)
Translates to: SPSVRAVYTSSYVPF*WSTTGTGRRVPSGP
Trigger: CGGCCCGGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp TCCCGCCACTCACACCAGCCTCGCGTTGGAACAGGATaGGAGGGCAAAGCTCGGACTGCGGCCACTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SRHSHQPRVGTG*EGKARTAATLK
Trigger: CTTCAGAGTGGCCGCAGTCCGAGCTTTGCCCTCGCATCCTGTTCCAACGCGAGGCTGGTGTGAGTGGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345851.8
CDS GCA 72 bp AGTGCCGAGACGCCCTGCTCTGGGAGGATGGACGTCTaGCGGCATACTGGACAGGATAGCGTCAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: SAETPCSGRMDV*RHTGQDSVRLW
Trigger: CCAGAGCCTGACGCTATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp TGGGGGTCCTCCGGGTCGTGGGCCCCATCAGGTGCCTaGTGCATTGCCTCCATGAGGCTGCTGATGAAGAAG +
Preference number: 6 (lower is better)
Translates to: WGSSGSWAPSGA*CIASMRLLMKK
Trigger: CTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCACGACCCGGAGGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp GTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTGCTaGAGTGCTTGCTCCAGGTCCTCGAACGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: VSRSLTRACLRC*SACSRSSNAAL
Trigger: CAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CCGCAGACCGTCCACCTCAAGGACCAGTTCCAGCTGTaGATTCTCATGTGGCCGCTCCGGGAAGGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: PQTVHLKDQFQL*ILMWPLREGLC
Trigger: GCACAGGCCTTCCCGGAGCGGCCACATGAGAATGCACAGCTGGAACTGGTCCTTGAGGTGGACGGTCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TCCAGGTCCTCGAACGCTGCACTGATCTGGGCCAGGGCCTCTGCCTaGCGCTCCTGCAGCTGCTGGCTGATGCCCCCGACTAAGGCAATT +
Preference number: 6 (lower is better)
Translates to: SRSSNAALIWARASA*RSCSCWLMPPTKAI
Trigger: AATTGCCTTAGTCGGGGGCATCAGCCAGCAGCTGCAGGAGCGCAAGGCAGAGGCCCTGGCCCAGATCAGTGCAGCGTTCGAGGACCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp ACCGTTTCGTGTGCAGTGGCGCTCGTGGTGAGCAGTGCGCCCAGATaGAGCACCGATCGCCGCAGACCGTCCACCTCAAGGACCAGTTCC +
Preference number: 6 (lower is better)
Translates to: TVSCAVALVVSSAPR*STDRRRPSTSRTSS
Trigger: GGAACTGGTCCTTGAGGTGGACGGTCTGCGGCGATCGGTGCTCAATCTGGGCGCACTGCTCACCACGAGCGCCACTGCACACGAAACGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CAGGTCGCTGACCAGAGCCTGCTTGCGCTGCTGCAGTaGTTGCTCCAGGTCCTCGAACGCTGCACTGATCTG +
Preference number: 6 (lower is better)
Translates to: QVADQSLLALLQ*LLQVLERCTDL
Trigger: CAGATCAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp ATGGTCTCCAGGTCGCTGACCAGAGCCTGCTTGCGCTaGTGCAGTGCTTGCTCCAGGTCCTCGAACGCTGCA +
Preference number: 6 (lower is better)
Translates to: MVSRSLTRACLR*CSACSRSSNAA
Trigger: TGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp GCATACCAGGAACTGCTTGTCCATTGGCTGGACCTCTaGGCCAGGGCTGTCCTCCCTCTTTGCCATGGCGCC +
Preference number: 6 (lower is better)
Translates to: AYQELLVHWLDL*ARAVLPLCHGA
Trigger: GGCGCCATGGCAAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS CCA 72 bp GCTCACGATGCTCCCCGGCGCGGCACTCACCACACATaGCCGTCTCACAGGCCTCACAGTAAAACTCCATCG +
Preference number: 6 (lower is better)
Translates to: AHDAPRRGTHHT*PSHRPHSKTPS
Trigger: CGATGGAGTTTTACTGTGAGGCCTGTGAGACGGCCATGTGTGGTGAGTGCCGCGCCGGGGAGCATCGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TGTTTGGCCCCACAAATGGTCTCCAGGTCGCTGACCAGAGCCTGCTaGCGCTGCTGCAGTGCTTGCTCCAGGTCCTCGAACGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: CLAPQMVSRSLTRAC*RCCSACSRSSNAAL
Trigger: CAGTGCAGCGTTCGAGGACCTGGAGCAAGCACTGCAGCAGCGCAAGCAGGCTCTGGTCAGCGACCTGGAGACCATTTGTGGGGCCAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529058.1
ENST00000536344.5
ENST00000639856.1
CDS TCA 72 bp GGCTCCGGGAAGGGCGGTGTAGTCGGTCTCAGGGATTaGGATGAGACTCCGTCAAGAAAAGGCAGCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GSGKGGVVGLRD*DETPSRKGSWG
Trigger: GCCCCAGCTGCCTTTTCTTGACGGAGTCTCATCTCAATCCCTGAGACCGACTACACCGCCCTTCCCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CCA 72 bp TGTTCTGCAGTGCCGAGACGCCCTGCTCTGGGAGGATaGACGTCTGCCGGCATACTGGACAGGATAGCGTCA +
Preference number: 6 (lower is better)
Translates to: CSAVPRRPALGG*TSAGILDRIAS
Trigger: TGACGCTATCCTGTCCAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp CGCGCTGTGTACACTAGCTCATATGTGCCATTCTTGTaGTCCACCACTGGCACCGGAAGGCGCGTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: RAVYTSSYVPFL*STTGTGRRVPS
Trigger: GGACGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp TGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAGCTaGGCCTACGCACTGCCTTCTGGCGCACATGGCTGC +
Preference number: 6 (lower is better)
Translates to: CPFVCRLCCTWS*AYALPSGAHGC
Trigger: GCAGCCATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp GTGCGCGCTGTGTACACTAGCTCATATGTGCCATTCTaGTGGTCCACCACTGGCACCGGAAGGCGCGTGCCG +
Preference number: 6 (lower is better)
Translates to: VRAVYTSSYVPF*WSTTGTGRRVP
Trigger: CGGCACGCGCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp GGGCACTGGTACCGATCCAGGCAGATGCTGCATACCAGGAACTGCTaGTCCATTGGCTGGACCTCTGGGCCAGGGCTGTCCTCCCTCTTT +
Preference number: 6 (lower is better)
Translates to: GHWYRSRQMLHTRNC*SIGWTSGPGLSSLF
Trigger: AAAGAGGGAGGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATCGGTACCAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS TCA 72 bp CGGGAAGGGCGGTGTAGTCGGTCTCAGGGATTGAGATaGGACTCCGTCAAGAAAAGGCAGCTGGGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: REGRCSRSQGLR*DSVKKRQLGQQ
Trigger: CTGCTGCCCCAGCTGCCTTTTCTTGACGGAGTCTCATCTCAATCCCTGAGACCGACTACACCGCCCTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS TCA 72 bp AGGGCTTTGGAGGAGGATAGGGTGAAGCCCCAGGGCTaGGAACCCCCACCCAGATCTACAGCTACAGCCCAA +
Preference number: 6 (lower is better)
Translates to: RALEEDRVKPQG*EPPPRSTATAQ
Trigger: TTGGGCTGTAGCTGTAGATCTGGGTGGGGGTTCTCAGCCCTGGGGCTTCACCCTATCCTCCTCCAAAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp CTCCGGGTCGTGGGCCCCATCAGGTGCCTGCTGCATTaGCTCCATGAGGCTGCTGATGAAGAAGTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: LRVVGPIRCLLH*LHEAADEEVVL
Trigger: CAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTGATGGGGCCCACGACCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CGCCTTCCGTGCGCGCTGTGTACACTAGCTCATATGTaGCATTCTTGTGGTCCACCACTGGCACCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RLPCALCTLAHM*HSCGPPLAPEG
Trigger: GCCTTCCGGTGCCAGTGGTGGACCACAAGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp AGCATCAGCCACCACCACATGGCCATCCGAGGTCAGTaGCAGGCCCTGTGGACCATACAGTGGTTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SISHHHMAIRGQ*QALWTIQWFCR
Trigger: TCTGCAGAACCACTGTATGGTCCACAGGGCCTGGCACTGACCTCGGATGGCCATGTGGTGGTGGCTGATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000532542.1
ENST00000533064.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp CCGCCTGCCTCCTGGAGGCGCCCTTTCCGGCTTCCTTaGAGTGCTCCTATGGAATATGCTAGTCTATCGGCT +
Preference number: 6 (lower is better)
Translates to: PPASWRRPFRLP*SAPMEYASLSA
Trigger: AGCCGATAGACTAGCATATTCCATAGGAGCACTCCAAGGAAGCCGGAAAGGGCGCCTCCAGGAGGCAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CAA 72 bp TACCGATCCAGGCAGATGCTGCATACCAGGAACTGCTaGTCCATTGGCTGGACCTCTGGGCCAGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: YRSRQMLHTRNC*SIGWTSGPGLS
Trigger: GGACAGCCCTGGCCCAGAGGTCCAGCCAATGGACAAGCAGTTCCTGGTATGCAGCATCTGCCTGGATCGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS CAA 90 bp TCAGGTGCCTGCTGCATTGCCTCCATGAGGCTGCTGATGAAGAAGTaGTTCTGCAGTGCCGAGACGCCCTGCTCTGGGAGGATGGACGTC +
Preference number: 6 (lower is better)
Translates to: SGACCIASMRLLMKK*FCSAETPCSGRMDV
Trigger: GACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAATGCAGCAGGCACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CTGATGAAGAAGTTGTTCTGCAGTGCCGAGACGCCCTaGTCTGGGAGGATGGACGTCTGCCGGCATACTGGA +
Preference number: 6 (lower is better)
Translates to: LMKKLFCSAETP*SGRMDVCRHTG
Trigger: TCCAGTATGCCGGCAGACGTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CGTAGAGCAGCACCGAGAGGAGCAGCTCGCCTTCCGTaGGCGCTGTGTACACTAGCTCATATGTGCCATTCT +
Preference number: 6 (lower is better)
Translates to: RRAAPRGAARLP*ALCTLAHMCHS
Trigger: AGAATGGCACATATGAGCTAGTGTACACAGCGCGCACGGAAGGCGAGCTGCTCCTCTCGGTGCTGCTCTACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp GCCCCTCCAACCTGCAACCATCTGTCCCTGCAGGTTTaGAGCCCAGGATCTGAAGCCAATTGCAGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: APPTCNHLSLQV*SPGSEANCRRE
Trigger: CTCCCTTCTGCAATTGGCTTCAGATCCTGGGCTGCAAACCTGCAGGGACAGATGGTTGCAGGTTGGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359518.7
ENST00000528227.5
ENST00000529529.1
CDS CCA 72 bp TTGGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACATaGAGCTGGGCCTACGCACTGCCTTCTGGCGCACAT +
Preference number: 6 (lower is better)
Translates to: LGCPFVCRLCCT*SWAYALPSGAH
Trigger: ATGTGCGCCAGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp ACAATGATATGTCCATTCCGGTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCAGCTCCAATCTTGGTC +
Preference number: 6 (lower is better)
Translates to: TMICPFRSTATP*GPMRRPAPILV
Trigger: GACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGACCGGAATGGACATATCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp AAGGCACAAAGTCCAGTATGGGCACCACTTGAGGACTaGTCCAGTGTGGCTGGACTGCAGGGAGCACCCAGG +
Preference number: 6 (lower is better)
Translates to: KAQSPVWAPLED*SSVAGLQGAPR
Trigger: CCTGGGTGCTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAGTGGTGCCCATACTGGACTTTGTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CAA 90 bp CCAACACGGAAGACGAGCTCATCCTCAATTGGGTTGTCCTTTCGTTaGCCGCCTGTGCTGTACATGGAGCTGGGCCTACGCACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: PTRKTSSSSIGLSFR*PPVLYMELGLRTAF
Trigger: GAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp GCTACCACGATGCGGCCGCTGCTGGCTGCGGACACACCTTGTAAATaGGTGAATTCACCTTTCTCCCTTCCACGACTGCCAACACGGAAG +
Preference number: 6 (lower is better)
Translates to: ATTMRPLLAADTPCK*VNSPFSLPRLPTRK
Trigger: CTTCCGTGTTGGCAGTCGTGGAAGGGAGAAAGGTGAATTCACCAATTTACAAGGTGTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS TCA 72 bp TTCCATTGGAGTCCACAGCTACTCCTGTGGGGGCATTaGACTGCCCATTGCCCTCGCCATGGGAGCCAAACT +
Preference number: 6 (lower is better)
Translates to: FHWSPQLLLWGH*TAHCPRHGSQT
Trigger: AGTTTGGCTCCCATGGCGAGGGCAATGGGCAGTTCAATGCCCCCACAGGAGTAGCTGTGGACTCCAATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000532542.1
ENST00000533064.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp ATTGCCTCCATGAGGCTGCTGATGAAGAAGTTGTTCTaGAGTGCCGAGACGCCCTGCTCTGGGAGGATGGAC +
Preference number: 6 (lower is better)
Translates to: IASMRLLMKKLF*SAETPCSGRMD
Trigger: GTCCATCCTCCCAGAGCAGGGCGTCTCGGCACTGCAGAACAACTTCTTCATCAGCAGCCTCATGGAGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000528932.1
ENST00000529529.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp GGCCCTCATTGGAGAAAACCTGAATACACTGGTTGTTaGTGTCTGCTACCACGATGCGGCCGCTGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GPHWRKPEYTGC*CLLPRCGRCWL
Trigger: CAGCCAGCAGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAGTGTATTCAGGTTTTCTCCAATGAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp CTTAGTAGCAGACTGAATACACTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCTGCTGGCTGCGGACAC +
Preference number: 6 (lower is better)
Translates to: LSSRLNTLVVAV*YHDAAAAGCGH
Trigger: GTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAGTGTATTCAGTCTGCTACTAAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526845.1
CDS CCA 72 bp GGAGGCGCCCTTTCCGGCTTCCTTGGAGTGCTCCTATaGAATATGCTAGTCTATCGGCTGACCAGGAAGACG +
Preference number: 6 (lower is better)
Translates to: GGALSGFLGVLL*NMLVYRLTRKT
Trigger: CGTCTTCCTGGTCAGCCGATAGACTAGCATATTCCATAGGAGCACTCCAAGGAAGCCGGAAAGGGCGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525074.5
ENST00000529529.1
CDS CCA 72 bp GTCCAGTATGGGCACCACTTGAGGACTTGTCCAGTGTaGCTGGACTGCAGGGAGCACCCAGGTGAACAAAAG +
Preference number: 6 (lower is better)
Translates to: VQYGHHLRTCPV*LDCREHPGEQK
Trigger: CTTTTGTTCACCTGGGTGCTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAGTGGTGCCCATACTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CAA 90 bp CTTCCACGACTGCCAACACGGAAGACGAGCTCATCCTCAATTGGGTaGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAGCTGGGCCTA +
Preference number: 6 (lower is better)
Translates to: LPRLPTRKTSSSSIG*SFRLPPVLYMELGL
Trigger: TAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TCTCCCTTCCACGACTGCCAACACGGAAGACGAGCTCATCCTCAATaGGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SPFHDCQHGRRAHPQ*GCPFVCRLCCTWSW
Trigger: CCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTGGAAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TTGTCGACCACAATGATATGTCCATTCCGGTCTACGGCCACTCCCTaGGGGCCCATGAGGCGGCCAGCTCCAATCTTGGTCTTGAACTTG +
Preference number: 6 (lower is better)
Translates to: LSTTMICPFRSTATP*GPMRRPAPILVLNL
Trigger: CAAGTTCAAGACCAAGATTGGAGCTGGCCGCCTCATGGGCCCCAAGGGAGTGGCCGTAGACCGGAATGGACATATCATTGTGGTCGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS TCA 72 bp CAACCATCTGTCCCTGCAGGTTTGCAGCCCAGGATCTaGAGCCAATTGCAGAAGGGAGGAGGTCAGAACCAG +
Preference number: 6 (lower is better)
Translates to: QPSVPAGLQPRI*SQLQKGGGQNQ
Trigger: CTGGTTCTGACCTCCTCCCTTCTGCAATTGGCTTCAGATCCTGGGCTGCAAACCTGCAGGGACAGATGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359518.7
ENST00000528227.5
ENST00000529529.1
CDS GCA 72 bp CATCCTCAATTGGGTTGTCCTTTCGTTTGCCGCCTGTaGTGTACATGGAGCTGGGCCTACGCACTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: HPQLGCPFVCRL*CTWSWAYALPS
Trigger: AGAAGGCAGTGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp AGACGAGCTCATCCTCAATTGGGTTGTCCTTTCGTTTaGCGCCTGTGCTGTACATGGAGCTGGGCCTACGCA +
Preference number: 6 (lower is better)
Translates to: RRAHPQLGCPFV*RLCCTWSWAYA
Trigger: TGCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp ATTGGAGAAAACCTGAATACACTGGTTGTTGCTGTCTaGTACCACGATGCGGCCGCTGCTGGCTGCGGACAC +
Preference number: 6 (lower is better)
Translates to: IGENLNTLVVAV*YHDAAAAGCGH
Trigger: GTGTCCGCAGCCAGCAGCGGCCGCATCGTGGTAGCAGACAGCAACAACCAGTGTATTCAGGTTTTCTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000536344.5
ENST00000639856.1
CDS GCA 72 bp GATCTAAGACACACAGGACTGCATCACTCCCCTGCCTaGAATCCTGTGACTCCCCATAGCTCTTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: DLRHTGLHHSPA*NPVTPHSSWEE
Trigger: CTCCTCCCAAGAGCTATGGGGAGTCACAGGATTGCAGGCAGGGGAGTGATGCAGTCCTGTGTGTCTTAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CAA 72 bp AAGACGAGCTCATCCTCAATTGGGTTGTCCTTTCGTTaGCCGCCTGTGCTGTACATGGAGCTGGGCCTACGC +
Preference number: 6 (lower is better)
Translates to: KTSSSSIGLSFR*PPVLYMELGLR
Trigger: GCGTAGGCCCAGCTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp CTGGGGACACAAGATGAACGAGAGCCAGGAGCAGCCTaGGAGAACTCAAGTTCTGGGCATTGGCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LGTQDEREPGAA*ENSSSGHWPCS
Trigger: AGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAAGGCTGCTCCTGGCTCTCGTTCATCTTGTGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS TCA 72 bp GAGTGCAGAAAGGAGGGAGAGGCAAGATCAGGCAGATaGGAGTCTGTTTTGGGGGAACGGGCATATGGGACA +
Preference number: 6 (lower is better)
Translates to: ECRKEGEARSGR*ESVLGERAYGT
Trigger: TGTCCCATATGCCCGTTCCCCCAAAACAGACTCTCATCTGCCTGATCTTGCCTCTCCCTCCTTTCTGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS GCA 72 bp GAACCCCCACCCAGATCTACAGCTACAGCCCAAATCTaGTTCATAGGCTTCACATCCATGTGCCCTACTGCC +
Preference number: 6 (lower is better)
Translates to: EPPPRSTATAQI*FIGFTSMCPTA
Trigger: GGCAGTAGGGCACATGGATGTGAAGCCTATGAAGCAGATTTGGGCTGTAGCTGTAGATCTGGGTGGGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CCA 72 bp AACGGTTGTCATAGTCTGCCACAATTATGTCTCCATTaGTGTCCACTGCCACACCTGTGGGGCGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: NGCHSLPQLCLH*CPLPHLWGAAA
Trigger: AGCTGCAGCGCCCCACAGGTGTGGCAGTGGACACCAATGGAGACATAATTGTGGCAGACTATGACAACCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp CTGCCAACACGGAAGACGAGCTCATCCTCAATTGGGTaGTCCTTTCGTTTGCCGCCTGTGCTGTACATGGAG +
Preference number: 6 (lower is better)
Translates to: LPTRKTSSSSIG*SFRLPPVLYME
Trigger: CTCCATGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp CACGACTGCCAACACGGAAGACGAGCTCATCCTCAATaGGGTTGTCCTTTCGTTTGCCGCCTGTGCTGTACA +
Preference number: 6 (lower is better)
Translates to: HDCQHGRRAHPQ*GCPFVCRLCCT
Trigger: TGTACAGCACAGGCGGCAAACGAAAGGACAACCCAATTGAGGATGAGCTCGTCTTCCGTGTTGGCAGTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000527237.1
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp TTTTGGAGACATCTCTCACAGAAGGTGTGCAGGCAAGGAAGAACCTaGGGGCACTGGTACCGATCCAGGCAGATGCTGCATACCAGGAAC +
Preference number: 6 (lower is better)
Translates to: FWRHLSQKVCRQGRT*GHWYRSRQMLHTRN
Trigger: GTTCCTGGTATGCAGCATCTGCCTGGATCGGTACCAGTGCCCCAAGGTTCTTCCTTGCCTGCACACCTTCTGTGAGAGATGTCTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000528227.5
ENST00000529529.1
CDS CAA 90 bp CTCCAGTTTGAGCAGCTCAGGTTCTGGCTCAATACTGATGAGGCTTaGGGATGTCTTGTTCTTCCAGTCCCAGCCTATCCCACCCCTGAC +
Preference number: 6 (lower is better)
Translates to: LQFEQLRFWLNTDEA*GCLVLPVPAYPTPD
Trigger: GTCAGGGGTGGGATAGGCTGGGACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACCTGAGCTGCTCAAACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS TCA 72 bp ATTGTAAAAGGCACAAAGTCCAGTATGGGCACCACTTaGGGACTTGTCCAGTGTGGCTGGACTGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: IVKGTKSSMGTT*GLVQCGWTAGS
Trigger: GCTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAGTGGTGCCCATACTGGACTTTGTGCCTTTTACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS TCA 72 bp CAGTGGTCCCCTGTGGCAGGACAGCACTCATCAGTATaGGAAGGGAGATACCATGAGCTCCACGAGCTAAAT +
Preference number: 6 (lower is better)
Translates to: QWSPVAGQHSSV*EGRYHELHELN
Trigger: ATTTAGCTCGTGGAGCTCATGGTATCTCCCTTCTCATACTGATGAGTGCTGTCCTGCCACAGGGGACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 72 bp GATTGTAAAAGGCACAAAGTCCAGTATGGGCACCACTaGAGGACTTGTCCAGTGTGGCTGGACTGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: DCKRHKVQYGHH*RTCPVWLDCRE
Trigger: CTCCCTGCAGTCCAGCCACACTGGACAAGTCCTCAAGTGGTGCCCATACTGGACTTTGTGCCTTTTACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CAA 72 bp GGTTCTGGCTCAATACTGATGAGGCTTTGGGATGTCTaGTTCTTCCAGTCCCAGCCTATCCCACCCCTGACA +
Preference number: 6 (lower is better)
Translates to: GSGSILMRLWDV*FFQSQPIPPLT
Trigger: TGTCAGGGGTGGGATAGGCTGGGACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 72 bp GAGCAGCTCAGGTTCTGGCTCAATACTGATGAGGCTTaGGGATGTCTTGTTCTTCCAGTCCCAGCCTATCCC +
Preference number: 6 (lower is better)
Translates to: EQLRFWLNTDEA*GCLVLPVPAYP
Trigger: GGGATAGGCTGGGACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACCTGAGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 90 bp ACCAGTTTGCCATTGGGCTGGAAGGTAAAGACGCAGCAAGACTTGTaGTCGACCACAATGATATGTCCATTCCGGTCTACGGCCACTCCC +
Preference number: 6 (lower is better)
Translates to: TSLPLGWKVKTQQDL*STTMICPFRSTATP
Trigger: GGGAGTGGCCGTAGACCGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp CCAACCAGTTTGCCATTGGGCTGGAAGGTAAAGACGCAGCAAGACTaGTTGTCGACCACAATGATATGTCCATTCCGGTCTACGGCCACT +
Preference number: 6 (lower is better)
Translates to: PTSLPLGWKVKTQQD*LSTTMICPFRSTAT
Trigger: AGTGGCCGTAGACCGGAATGGACATATCATTGTGGTCGACAACAAGTCTTGCTGCGTCTTTACCTTCCAGCCCAATGGCAAACTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS TCA 72 bp ATTGATCTTCCTGTCTCAGTCTTGCCTCAGCCTGAGTaGTCTAAGACACACAGGACTGCATCACTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: IDLPVSVLPQPE*SKTHRTASLPC
Trigger: GCAGGGGAGTGATGCAGTCCTGTGTGTCTTAGATCACTCAGGCTGAGGCAAGACTGAGACAGGAAGATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp AGGGGAGAAGATGCTGACCCAACGGTTGTCATAGTCTaGCACAATTATGTCTCCATTGGTGTCCACTGCCAC +
Preference number: 6 (lower is better)
Translates to: RGEDADPTVVIV*HNYVSIGVHCH
Trigger: GTGGCAGTGGACACCAATGGAGACATAATTGTGGCAGACTATGACAACCGTTGGGTCAGCATCTTCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000532542.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp AGCAGCTCAGGTTCTGGCTCAATACTGATGAGGCTTTaGGATGTCTTGTTCTTCCAGTCCCAGCCTATCCCA +
Preference number: 6 (lower is better)
Translates to: SSSGSGSILMRL*DVLFFQSQPIP
Trigger: TGGGATAGGCTGGGACTGGAAGAACAAGACATCCCAAAGCCTCATCAGTATTGAGCCAGAACCTGAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 72 bp GTTCCCACCTTGCATTCTTGGCTCTTCCTGTGTCTTTaGTCTCAAACACTCTCGTCCTCCTCTGCCTTCCAT +
Preference number: 6 (lower is better)
Translates to: VPTLHSWLFLCL*SQTLSSSSAFH
Trigger: ATGGAAGGCAGAGGAGGACGAGAGTGTTTGAGACAAAAGACACAGGAAGAGCCAAGAATGCAAGGTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS TCA 72 bp CACGGTCCCCTCCTCAAGCTGAGTCTGAACTACTTGTaGTTTCTCGAACACACTATTAAGGTTCCCACCTTG +
Preference number: 6 (lower is better)
Translates to: HGPLLKLSLNYL*FLEHTIKVPTL
Trigger: CAAGGTGGGAACCTTAATAGTGTGTTCGAGAAATCACAAGTAGTTCAGACTCAGCTTGAGGAGGGGACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS TCA 72 bp AGGGGTGGGGTCTCCAGGACTGAGACAAATTATTTCTaGGATGATAGGGCTAACGTAAGGGAAGTGGGATCT +
Preference number: 6 (lower is better)
Translates to: RGGVSRTETNYF*DDRANVREVGS
Trigger: AGATCCCACTTCCCTTACGTTAGCCCTATCATCTCAGAAATAATTTGTCTCAGTCCTGGAGACCCCACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS GCA 72 bp CCTGTGTCTTTTGTCTCAAACACTCTCGTCCTCCTCTaGCTTCCATTTAATTCCCACTTGTGCTTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: PVSFVSNTLVLL*LPFNSHLCLRS
Trigger: GGACCTCAAGCACAAGTGGGAATTAAATGGAAGGCAGAGGAGGACGAGAGTGTTTGAGACAAAAGACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp CTCGCATGGCATAAGGACTGCATCTGTTTTGTTTGCTaGTGCACTTGCAGCACTGATATGGCATTTGGCACA +
Preference number: 6 (lower is better)
Translates to: LAWHKDCICFVC*CTCSTDMAFGT
Trigger: TGTGCCAAATGCCATATCAGTGCTGCAAGTGCAGCAGCAAACAAAACAGATGCAGTCCTTATGCCATGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 72 bp AATGACTGGTGCCACCCAGCTGGCCATGAGTCACTCTaGACTCCAATTTCTTCTCTGTTTGATAGGCCAATG +
Preference number: 6 (lower is better)
Translates to: NDWCHPAGHESL*TPISSLFDRPM
Trigger: CATTGGCCTATCAAACAGAGAAGAAATTGGAGTCAAGAGTGACTCATGGCCAGCTGGGTGGCACCAGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CAA 90 bp ACGGTCCAGGCTCACATCATTTCTCATCTGGATCACTGCAAAAGATaGATCTTCCTGTCTCAGTCTTGCCTCAGCCTGAGTGATCTAAGA +
Preference number: 6 (lower is better)
Translates to: TVQAHIISHLDHCKR*IFLSQSCLSLSDLR
Trigger: TCTTAGATCACTCAGGCTGAGGCAAGACTGAGACAGGAAGATCAATCTTTTGCAGTGATCCAGATGAGAAATGATGTGAGCCTGGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp GATCACTGCAAAAGATTGATCTTCCTGTCTCAGTCTTaGCTCAGCCTGAGTGATCTAAGACACACAGGACTG +
Preference number: 6 (lower is better)
Translates to: DHCKRLIFLSQS*LSLSDLRHTGL
Trigger: CAGTCCTGTGTGTCTTAGATCACTCAGGCTGAGGCAAGACTGAGACAGGAAGATCAATCTTTTGCAGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp ACGGTCCAGGCTCACATCATTTCTCATCTGGATCACTaGAAAAGATTGATCTTCCTGTCTCAGTCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: TVQAHIISHLDH*KRLIFLSQSCL
Trigger: GAGGCAAGACTGAGACAGGAAGATCAATCTTTTGCAGTGATCCAGATGAGAAATGATGTGAGCCTGGACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp TTCCATCTCAAATCCCTCTCTCAAGTCTATACCCTATaGATACACTGTCTCGTCTTTCTCACGGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: FHLKSLSQVYTL*IHCLVFLTVQA
Trigger: AGCCTGGACCGTGAGAAAGACGAGACAGTGTATGCATAGGGTATAGACTTGAGAGAGGGATTTGAGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS GCA 72 bp AAATCAGTTCTCTTAGTTCTCTATCTCAATGACTGGTaGCACCCAGCTGGCCATGAGTCACTCTTGACTCCA +
Preference number: 6 (lower is better)
Translates to: KSVLLVLYLNDW*HPAGHESLLTP
Trigger: TGGAGTCAAGAGTGACTCATGGCCAGCTGGGTGGCACCAGTCATTGAGATAGAGAACTAAGAGAACTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CCA 72 bp CAGTTGAGAAATGATGATGGCTTGGACCAAGGAAATTaGCTGGAGGGACGCAGATGGACTCAAGACATATGT +
Preference number: 6 (lower is better)
Translates to: QLRNDDGLDQGN*LEGRRWTQDIC
Trigger: ACATATGTCTTGAGTCCATCTGCGTCCCTCCAGCCAATTTCCTTGGTCCAAGCCATCATCATTTCTCAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526845.1
ENST00000532542.1
CDS CCA 72 bp ATGAATGAACTCCCCAGCTCAATCTCAGACCTGAACTaGACATCTCCACTTGAATGCCGCATAGCTATCTCA +
Preference number: 6 (lower is better)
Translates to: MNELPSSISDLN*TSPLECRIAIS
Trigger: TGAGATAGCTATGCGGCATTCAAGTGGAGATGTCCAGTTCAGGTCTGAGATTGAGCTGGGGAGTTCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 72 bp CAACTCCATCTCTTAGTCCTGCAGGGCTGTTTAAACTaGTCCCACCAACAGGCATCACTTTCTTCTAATGTG +
Preference number: 6 (lower is better)
Translates to: QLHLLVLQGCLN*SHQQASLSSNV
Trigger: CACATTAGAAGAAAGTGATGCCTGTTGGTGGGACCAGTTTAAACAGCCCTGCAGGACTAAGAGATGGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CCA 72 bp TTGGAGAACTCAAGTTCTGGGCATTGGCCTTGCTCTTaGATTCAAATCTGTGCCTTCCTTAATGGACTGGTC +
Preference number: 6 (lower is better)
Translates to: LENSSSGHWPCS*IQICAFLNGLV
Trigger: GACCAGTCCATTAAGGAAGGCACAGATTTGAATCCAAGAGCAAGGCCAATGCCCAGAACTTGAGTTCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 90 bp TTCACTGAATGGTTATGGAAGTCCGTTACTACAATTTCATTCTTGTaGTTCACAGCCACAAAATGGGGCCCTGCAAAGTGGCGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: FTEWLWKSVTTISFL*FTATKWGPAKWRSV
Trigger: CACTGACCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp ACCTTCACTGAATGGTTATGGAAGTCCGTTACTACAATTTCATTCTaGTTGTTCACAGCCACAAAATGGGGCCCTGCAAAGTGGCGGTCA +
Preference number: 6 (lower is better)
Translates to: TFTEWLWKSVTTISF*LFTATKWGPAKWRS
Trigger: TGACCGCCACTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 90 bp ACTATTAAGGTTCCCACCTTGCATTCTTGGCTCTTCCTGTGTCTTTaGTCTCAAACACTCTCGTCCTCCTCTGCCTTCCATTTAATTCCC +
Preference number: 6 (lower is better)
Translates to: TIKVPTLHSWLFLCL*SQTLSSSSAFHLIP
Trigger: GGGAATTAAATGGAAGGCAGAGGAGGACGAGAGTGTTTGAGACAAAAGACACAGGAAGAGCCAAGAATGCAAGGTGGGAACCTTAATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS TCA 72 bp TTCATTCTTGTTGTTCACAGCCACAAAATGGGGCCCTaGAAATACAAAGTGGTCTTCAGGGCAGTAAGCTGG +
Preference number: 6 (lower is better)
Translates to: FILVVHSHKMGP*KYKVVFRAVSW
Trigger: CCAGCTTACTGCCCTGAAGACCACTTTGTATTTTCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS TCA 72 bp CAGAGATATGAATGGGATTGTGAGAACATGAAGGGATaGAGGGGAATGGTGAGAAAAGGCTCCAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QRYEWDCENMKG*RGMVRKGSKRR
Trigger: TCTTCTCTTGGAGCCTTTTCTCACCATTCCCCTTCATCCCTTCATGTTCTCACAATCCCATTCATATCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526845.1
ENST00000532542.1
ENST00000533309.5
CDS CAA 72 bp TGGTTATGGAAGTCCGTTACTACAATTTCATTCTTGTaGTTCACAGCCACAAAATGGGGCCCTGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: WLWKSVTTISFL*FTATKWGPAKW
Trigger: CCACTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CAA 72 bp TCACATCCATGTGCCCTACTGCCTAGTAGACATCTCTaGCTGATGTCCATTGGGAATATCAAATCTAACAGC +
Preference number: 6 (lower is better)
Translates to: SHPCALLPSRHL*LMSIGNIKSNS
Trigger: GCTGTTAGATTTGATATTCCCAATGGACATCAGCAAGAGATGTCTACTAGGCAGTAGGGCACATGGATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532542.1
ENST00000533064.1
CDS CCA 72 bp ACTACAATTTCATTCTTGTTGTTCACAGCCACAAAATaGGGCCCTGAAAATACAAAGTGGTCTTCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: TTISFLLFTATK*GPENTKWSSGQ
Trigger: CTGCCCTGAAGACCACTTTGTATTTTCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532542.1
CDS CAA 72 bp GAATGGTTATGGAAGTCCGTTACTACAATTTCATTCTaGTTGTTCACAGCCACAAAATGGGGCCCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: EWLWKSVTTISF*LFTATKWGPAK
Trigger: CTTTGCAGGGCCCCATTTTGTGGCTGTGAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000530724.1
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1
CDS CCA 72 bp TCTCCATCGGCACTGTACACCTTCACTGAATGGTTATaGAAGTCCGTTACTACAATTTCATTCTTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: SPSALYTFTEWL*KSVTTISFLLF
Trigger: GAACAACAAGAATGAAATTGTAGTAACGGACTTCCATAACCATTCAGTGAAGGTGTACAGTGCCGATGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345851.8
ENST00000359518.7
ENST00000525074.5
ENST00000533309.5
ENST00000536344.5
ENST00000639856.1