RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIM29 (Homo sapiens)

Ensembl gene IDs: ENSG00000137699

Ensembl transcript IDs: ENST00000341846.10, ENST00000475051.4, ENST00000524664.5, ENST00000524816.7, ENST00000524956.4, ENST00000525887.5, ENST00000526161.5, ENST00000526881.1, ENST00000528870.5, ENST00000529011.1, ENST00000529040.1, ENST00000529044.5, ENST00000529495.1, ENST00000530470.1, ENST00000530919.5, ENST00000531555.5, ENST00000532195.1, ENST00000532833.1, ENST00000533302.5, ENST00000627238.1

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTGGAGACAGCAGGGCGTGGGCGGGAGAGGCAGGCTGATACCATaGGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: AWRQQGVGGRGRLIP*GYSLLAPRSSPRGG
Trigger: TCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCCACGCCCTGCTGTCTCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 90 bp GCATCCTGCTCCCGCTGCTCCAGCGCAGCCCTCACTTCCTCCTTTTaGTTCTCCAGGTCCCGCACCAGGTCCCGGAAGTTCTGCTCCAGG +
Preference number: 1 (lower is better)
Translates to: ASCSRCSSAALTSSF*FSRSRTRSRKFCSR
Trigger: CCTGGAGCAGAACTTCCGGGACCTGGTGCGGGACCTGGAGAAGCAAAAGGAGGAAGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 90 bp GGCCAGTCCTCTGGGAAGCAGGAGGTGGGCCATGTGAATGGGAGATaGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGAT +
Preference number: 1 (lower is better)
Translates to: GQSSGKQEVGHVNGR*VAVLSRHLLTTLGD
Trigger: ATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCATCTCCCATTCACATGGCCCACCTCCTGCTTCCCAGAGGACTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 90 bp GCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCCCGCTaGTCCAGCGCAGCCCTCACTTCCTCCTTTTGCTTCTCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: ASMITFTWSTASCSR*SSAALTSSFCFSRS
Trigger: GGACCTGGAGAAGCAAAAGGAGGAAGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 90 bp AGCACCTTGGCTCTCTCATCCAGAGCATCCATGATCACCTTCACTTaGTCCACAGCATCCTGCTCCCGCTGCTCCAGCGCAGCCCTCACT +
Preference number: 1 (lower is better)
Translates to: STLALSSRASMITFT*STASCSRCSSAALT
Trigger: AGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGAGCCAAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 90 bp ACAGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTaGTGTCAAGACACTGAGAGGTTTCCATCTGCAGTGGCCAAGGGC +
Preference number: 1 (lower is better)
Translates to: TDSKWLWWRPTAWVG*CQDTERFPSAVAKG
Trigger: GCCCTTGGCCACTGCAGATGGAAACCTCTCAGTGTCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR TCA 90 bp AGGAATGATGGTGACCATCTGAGGTCACAAGGCAGGAAAGGAGTCTaGATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGC +
Preference number: 1 (lower is better)
Translates to: RNDGDHLRSQGRKGV*MECGQWGSRRGRNC
Trigger: GCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCATTCAGACTCCTTTCCTGCCTTGTGACCTCAGATGGTCACCATCATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 90 bp TCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTaGTCCCGCTGCTCCAGCGCAGCCCTCACTTCCTCCTTTTGCTTC +
Preference number: 1 (lower is better)
Translates to: SSRASMITFTWSTAS*SRCSSAALTSSFCF
Trigger: GAAGCAAAAGGAGGAAGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp GAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATaGAGCACCTTGGCTCTCTCATCCAGAGCATCCATGATCACCTTC +
Preference number: 1 (lower is better)
Translates to: ESLMLCSCSRVCLSS*STLALSSRASMITF
Trigger: GAAGGTGATCATGGATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp AGGAGCTGCCTTGGACGACGGGCAGGTCATTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGG +
Preference number: 1 (lower is better)
Translates to: RSCLGRRAGHCQSSE*WRSTPRPGRCSYLW
Trigger: CCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 90 bp TCCGGACCCCACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATaGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGT +
Preference number: 1 (lower is better)
Translates to: SGPHLWVSGTWSISS*CPVHSTHPRSCSCS
Trigger: ACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTGGGGTCCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 90 bp AGCTGCCTTGGACGACGGGCAGGTCATTGTCAGAGTTCTGAATGCTaGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGC +
Preference number: 1 (lower is better)
Translates to: SCLGRRAGHCQSSEC*RSTPRPGRCSYLWC
Trigger: GCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp ACAGCTCCGTCTCCTTCTCGGCCTTGGCCTCCTCCACTGTCACGGTaGTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATGC +
Preference number: 1 (lower is better)
Translates to: TAPSPSRPWPPPLSR*YDSCAPGTCKGSRC
Trigger: GCATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTGGAGGAGGCCAAGGCCGAGAAGGAGACGGAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp AGAAACAACACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTaGTTGTCCTCATGCAGCACCTTGGCTCTCTCATCCAGAGCATCC +
Preference number: 1 (lower is better)
Translates to: RNNTESLMLCSCSRV*LSSCSTLALSSRAS
Trigger: GGATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 90 bp CCTGTGATGGGTTGGCCTCTGAGCACAGGAATGATGGTGACCATCTaGGGTCACAAGGCAGGAAAGGAGTCTGAATGGAGTGTGGCCAGT +
Preference number: 1 (lower is better)
Translates to: PVMGWPLSTGMMVTI*GHKAGKESEWSVAS
Trigger: ACTGGCCACACTCCATTCAGACTCCTTTCCTGCCTTGTGACCTCAGATGGTCACCATCATTCCTGTGCTCAGAGGCCAACCCATCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 90 bp CCTCCTCCACTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATaGAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCT +
Preference number: 1 (lower is better)
Translates to: PPPLSRCYDSCAPGT*KGSRCRSGRSGRRA
Trigger: AGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 90 bp TCACATAGCGATGGTCACCACCGTTCTCCATGTGGTTCCTCTCAATaGAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGC +
Preference number: 1 (lower is better)
Translates to: SHSDGHHRSPCGSSQ*SYGSGPPCTSSQRG
Trigger: GCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAGGAACCACATGGAGAACGGTGGTGACCATCGCTATGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp CGGTGCTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATaGAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCAT +
Preference number: 1 (lower is better)
Translates to: RCYDSCAPGTCKGSR*RSGRSGRRAPSSCH
Trigger: ATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp AATGCACCAAATTCCTGCAGAAACAACACAGAGTCGCTGATGCTATaGAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGCACCTTGGCT +
Preference number: 1 (lower is better)
Translates to: NAPNSCRNNTESLML*SCSRVCLSSCSTLA
Trigger: AGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTTTCTGCAGGAATTTGGTGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 90 bp TGCTCATCAATGCACCAAATTCCTGCAGAAACAACACAGAGTCGCTaGTGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGCA +
Preference number: 1 (lower is better)
Translates to: CSSMHQIPAETTQSR*CYAAAPGSACPHAA
Trigger: TGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTTTCTGCAGGAATTTGGTGCATTGATGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 90 bp TATCTCAGCAGAGGGAACAGAGGAATATCTTGGCTAAGGTCATCCTaGCAGTCAGGAGAAGCCACCCTCCAGGGACCACAGACTCAAAGT +
Preference number: 1 (lower is better)
Translates to: YLSRGNRGISWLRSS*QSGEATLQGPQTQS
Trigger: ACTTTGAGTCTGTGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATATTCCTCTGTTCCCTCTGCTGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 90 bp ACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATA +
Preference number: 1 (lower is better)
Translates to: TFGCQVHGVSLHGVR*TPLTPEAVRVVVHI
Trigger: TATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 90 bp TCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTaGCGCATGCATACATTGAGCAGGTCGTCCTTGAAGTTGCCTAGT +
Preference number: 1 (lower is better)
Translates to: SMKLRLRSALHIFST*RMHTLSRSSLKLPS
Trigger: ACTAGGCAACTTCAAGGACGACCTGCTCAATGTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 90 bp AGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTaGATGAAATTCTGTAGGCAAATGGTAAATGGTAGCTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SPATLHRQRECQSVD*MKFCRQMVNGSWAS
Trigger: ACTGGCCCAGCTACCATTTACCATTTGCCTACAGAATTTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGACTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAA +
Preference number: 2 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGLHGVR*TPLTPE
Trigger: TTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAG...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR TCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAGCGGGAGAGGCAGGCTaGTACCATGCGGGTACTCAC +
Preference number: 2 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRAGEAG*YHAGTH
Trigger: GTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGC...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGACGGAGAGGCCGGAACTaGCCCCAAGAGGCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRRRGRN*PQEAGR
Trigger: TCTGCCAGCCTCTTGGGGGCAGTTCCGGCCTCTCCG...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGACTCACTTCCTCCTTTTaGTTCTCCAGGTCCCGCACC +
Preference number: 2 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGLTSSF*FSRSRT
Trigger: GGTGCGGGACCTGGAGAAGCAAAAGGAGGAAGTGAG...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CAA 90 bp GCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTaGGAGAGAAACGTCTATAGGCCTGGAGACAGCAGGGCGTGGGCG +
Preference number: 2 (lower is better)
Translates to: AVLSRHLLTTLGDRA*ERNVYRPGDSRAWA
Trigger: CGCCCACGCCCTGCTGTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 90 bp CAGCACCTTGGCTCTCTCATCCAGAGCATCCATGATCACCTTCACTaGGTCCACAGCATCCTGCTCCCGCTGCTCCAGCGCAGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: QHLGSLIQSIHDHLH*VHSILLPLLQRSPH
Trigger: GTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGAGCCAAGGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGGAGTCGCTGATGCTATaGAGCTGCTCCCGGGTCTGC +
Preference number: 2 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGESLML*SCSRVC
Trigger: GCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTC...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCCTGCCCCCAAGAGGCTaGCAGAGGGCTGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPLPPRG*QRAAEG
Trigger: GCCCTCTGCAGCCCTCTGCCAGCCTCTTGGGGGCAG...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 90 bp AGTCTGCTTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTaGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGAGAAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SLLARFPSLGLGLGA*APHEGGIAFQGEGG
Trigger: TCCTCCTTCTCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAAGCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAAGCTGCAGAGGGCAGGTaGAGGACCAGGCTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QPSHTPSPERMPKCRLNEAAEGR*RTRLPP
Trigger: GGGAGGGAGCCTGGTCCTGCACCTGCCCTCTGCAGC...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGATGTGCTCCTGGAACATaGAAAGGTAGCAGATGCAGG +
Preference number: 2 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGCAPGT*KGSRCR
Trigger: CCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACA...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGTGGTCCACAGCATCCTaGTCCCGCTGCTCCAGCGCA +
Preference number: 2 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPWSTAS*SRCSSA
Trigger: TGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCA...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCGGAAGAGCAGGGGTGTaGCGCCTCGTTCCTTCCGCC +
Preference number: 2 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPGRAGV*RLVPSA
Trigger: GGCGGAAGGAACGAGGCGCCACACCCCTGCTCTTCC...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR TCA 90 bp ATATCTTGGCTAAGGTCATCCTGCCAGTCAGGAGAAGCCACCCTCCAGGGACCAAGGAGGTGGGCCATGTaGATGGGAGATGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ISWLRSSCQSGEATLQGPRRWAM*MGDGWL
Trigger: CAGCCACCCATCTCCCATTCACATGGCCCACCTCCT...TGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR TCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGAGGGTGGTCTCCTTGGTaGAGCGGCCAGGAGACGAGG +
Preference number: 2 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARGWSPW*SGQETR
Trigger: CCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCC...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGAGGTCCCGGAAGTTCTaGTCCAGGATGGCCTTCTCA +
Preference number: 2 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQRSRKF*SRMAFS
Trigger: TGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCT...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CAA 90 bp GGGGCTGTTGAGACGGGAGATGTCCCCACTGTGCTGCTCCTGGTTTaGTCTCCTCTCCAATCCTTGAGCACCCTGATATGCAACATGGGG +
Preference number: 2 (lower is better)
Translates to: GAVETGDVPTVLLLV*SPLQSLSTLICNMG
Trigger: CCCCATGTTGCATATCAGGGTGCTCAAGGATTGGAGAGGAGACAAAACCAGGAGCAGCACAGTGGGGACATCTCCCGTCTCAACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 90 bp CTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACATaGAGCAGGTCGTCCTTGAAGTTGCCTAGTGACTGTCCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LRSALHIFSTWRMHT*SRSSLKLPSDCPRP
Trigger: GGGCCTGGGACAGTCACTAGGCAACTTCAAGGACGACCTGCTCAATGTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR TCA 90 bp GTGAGACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTGTCCACAGCAGGACTTaGGGGATGCTCAGACCTTGC +
Preference number: 2 (lower is better)
Translates to: VRLKGTLPLALSLRELTPVHSRT*GMLRPC
Trigger: GCAAGGTCTGAGCATCCCTCAAGTCCTGCTGTGGAC...AGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTCCGAGAGGAGGAGGCTaGCGGGTTAGGGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIPRGGG*RVRAGP
Trigger: GGGGCCTGCCCTAACCCGCCAGCCTCCTCCTCTCGG...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR CCA 90 bp GAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACCAGGTCTGGTCGGTCTaGCAGAAGAGCTCCATCGTC +
Preference number: 2 (lower is better)
Translates to: EVTAQVRLAHLLNVAHAYQVWSV*QKSSIV
Trigger: GACGATGGAGCTCTTCTGCCAGACCGACCAGACCTG...GTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp CTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGCCTCCGGACCCCACCTTTaGGTGTCAGGTACATGGAGT +
Preference number: 2 (lower is better)
Translates to: LNAGGVLPDPGGVVTFGASGPHL*VSGTWS
Trigger: ACTCCATGTACCTGACACCCAAAGGTGGGGTCCGGA...GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CAA 90 bp AATGGGAGATGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATaGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: NGRWVAVLSRHLLTT*GDRALERNVYRPGD
Trigger: GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCATCTCCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 90 bp ATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGCACCTaGGCTCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCC +
Preference number: 2 (lower is better)
Translates to: MLCSCSRVCLSSCST*ALSSRASMITFTWS
Trigger: GGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CAA 90 bp AACAACACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTaGTCCTCATGCAGCACCTTGGCTCTCTCATCCAGAGCATCCATG +
Preference number: 2 (lower is better)
Translates to: NNTESLMLCSCSRVC*SSCSTLALSSRASM
Trigger: CATGGATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR TCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAATGATGGTGACCATCTaGGGTCACAAGGCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRMMVTI*GHKAGK
Trigger: CTTTCCTGCCTTGTGACCTCAGATGGTCACCATCAT...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp CGGACCCCACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTAGAGCTCCATCGTCTTaGCATGCACGGGACACTTGC +
Preference number: 2 (lower is better)
Translates to: RTPPLGVRYMEYLFMVSGRAPSS*HARDTC
Trigger: GCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCT...ACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTGGGGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGTGCAAAGGTAGCAGATaGAGGTCTGGTCGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPCKGSR*RSGRSG
Trigger: GCCAGACCGACCAGACCTGCATCTGCTACCTTTGCA...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGC +
Preference number: 2 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRILSCS*SFCNDS
Trigger: GCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGAT...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR TCA 90 bp TGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATAGCCTGCTCCTTTTGCAATaGCAGCTCCGTCTCCTTCTC +
Preference number: 2 (lower is better)
Translates to: CPVHSTHPRSCSCSCSHSLLLLQ*QLRLLL
Trigger: GAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAG...GCTATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGACTGATGCTATGCAGCTaGTCCCGGGTCTGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARLMLCS*SRVCLS
Trigger: GGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAG...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp GAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGATGATCACCTTCACTTaGTCCACAGCATCCTGCTCC +
Preference number: 2 (lower is better)
Translates to: EYLFMVSGALHSPPKLFVMITFT*STASCS
Trigger: GGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCAT...CACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp CGGACCCCACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTCCTCATGCAGCACCTTaGCTCTCTCATCCAGAGCAT +
Preference number: 2 (lower is better)
Translates to: RTPPLGVRYMEYLFMVSGPHAAP*LSHPEH
Trigger: ATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGG...ACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTGGGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGCCACCGTTCTCCATGTaGTTCCTCTCAATGAAGTTA +
Preference number: 2 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRPPFSM*FLSMKL
Trigger: TAACTTCATTGAGAGGAACCACATGGAGAACGGTGG...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR TCA 90 bp CGGACCCCACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTACTGTCACGGTGCTATaGTTCTTGTGCTCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RTPPLGVRYMEYLFMVSGTVTVL*FLCSWN
Trigger: GTTCCAGGAGCACAAGAATCATAGCACCGTGACAGT...ACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTGGGGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCCTGCAGGTTCTGCCATaGTGGGCATTGATAGGTAGG +
Preference number: 2 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPLQVLP*WALIGR
Trigger: CCTACCTATCAATGCCCAGCATGGCAGAACCTGCAG...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp CACTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATTCCATCGTCTTGCCATaGACGGGACACTTGCGGGCC +
Preference number: 2 (lower is better)
Translates to: HCHGAMILVLLEHAKVADSIVLP*TGHLRA
Trigger: GGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGA...ATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAAACAGAGGAATATCTTaGCTAAGGTCATCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRNRGIS*LRSSCQ
Trigger: CTGGCAGGATGACCTTAGCCAAGATATTCCTCTGTT...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 90 bp TTCTCCATGTGGTTCCTCTCAATGAAGTTACGGCTCAGGTCCGCCTaGCACATCTTCTCAACGTGGCGCATGCATACATTGAGCAGGTCG +
Preference number: 2 (lower is better)
Translates to: FSMWFLSMKLRLRSA*HIFSTWRMHTLSRS
Trigger: CGACCTGCTCAATGTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAGGAACCACATGGAGAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp AGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGCCTCCACTGTCACGGTaGTATGATTCTTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: SSECWRSTPRPGRCSYLWPPLSR*YDSCAP
Trigger: AGGAGCACAAGAATCATAGCACCGTGACAGTGGAGG...CCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR GCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTGGCAGGCTGATACCATaGGGGTACTCACTGCTAGCC +
Preference number: 2 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIGRLIP*GYSLLA
Trigger: GGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCC...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTCAAAGTGGCTGTGGTaGAGACCCACCGCCTGGGTA +
Preference number: 2 (lower is better)
Translates to: CRQMVNGSWASSYLHGWISKWLW*RPTAWV
Trigger: TACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR GCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCGGGCCAGTAGCTATTTaGATGGGTGGATTATATCAT +
Preference number: 2 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPGPVAI*MGGLYH
Trigger: ATGATATAATCCACCCATGCAAATAGCTACTGGCCC...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 72 bp GAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTaGCCCCAAGAGGCTGGCAGAGGGCTGCAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: ECGQWGSRRGRN*PQEAGRGLQRA
Trigger: TGCCCTCTGCAGCCCTCTGCCAGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CCA 72 bp CTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTaGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCC +
Preference number: 3 (lower is better)
Translates to: LLAPRSSPRGGG*RVRAGPNLSHP
Trigger: GGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR-3UTR CAA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGATGCTCCCGGGTCTGCTaGTCCTCATGCAGCACCTTG +
Preference number: 3 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGCSRVC*SSCSTL
Trigger: CAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCA...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 72 bp GTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCACCTTTGGGTGTCAGG +
Preference number: 3 (lower is better)
Translates to: VVSLVKRPGDEG*YDVRTPPLGVR
Trigger: CCTGACACCCAAAGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp GAGACCCACCGCCTGGGTAGGGTGATGTCAAGACACTaGGAGGTTTCCATCTGCAGTGGCCAAGGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: ETHRLGRVMSRH*EVSICSGQGLQ
Trigger: CTGCAGCCCTTGGCCACTGCAGATGGAAACCTCTCAGTGTCTTGACATCACCCTACCCAGGCGGTGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR TCA 72 bp CTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTGGTATaGTGTCCGGACCCCACCTTTGGGTGTCAGGTACAT +
Preference number: 3 (lower is better)
Translates to: LLGEAARRRGLV*CPDPTFGCQVH
Trigger: ATGTACCTGACACCCAAAGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp CTGCCTTGGACGACGGGCAGGTCATTGTCAGAGTTCTaGATGCTGGAGGAGTACTCCCAGACCCGGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LPWTTGRSLSEF*MLEEYSQTREV
Trigger: CACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCATCTGCTGACAACATaGGGGGATAGGGCCTTGGAG +
Preference number: 3 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHHLLTT*GDRALE
Trigger: CTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 72 bp ACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTaGTTGTCCTCATGCAGCACCTTGGCTCTCTCATCC +
Preference number: 3 (lower is better)
Translates to: TESLMLCSCSRV*LSSCSTLALSS
Trigger: GGATGAGAGAGCCAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 72 bp TCTGGGAAGCAGGAGGTGGGCCATGTGAATGGGAGATaGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACA +
Preference number: 3 (lower is better)
Translates to: SGKQEVGHVNGR*VAVLSRHLLTT
Trigger: TGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCATCTCCCATTCACATGGCCCACCTCCTGCTTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CCA 72 bp GCTCTCTCATCCAGAGCATCCATGATCACCTTCACTTaGTCCACAGCATCCTGCTCCCGCTGCTCCAGCGCA +
Preference number: 3 (lower is better)
Translates to: ALSSRASMITFT*STASCSRCSSA
Trigger: TGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTCAGCTCCTTGCCTTaGTGTGGTCCACAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPVSSLP*CGPQQD
Trigger: GTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGAC...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR TCA 72 bp AAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTaGTGTCAAGACACTGAGAGGTTTCCATCTGCAGTG +
Preference number: 3 (lower is better)
Translates to: KWLWWRPTAWVG*CQDTERFPSAV
Trigger: CACTGCAGATGGAAACCTCTCAGTGTCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR GCA 72 bp CTTGGACGACGGGCAGGTCATTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGT +
Preference number: 3 (lower is better)
Translates to: LGRRAGHCQSSE*WRSTPRPGRCS
Trigger: ACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGAACAGAGGAATATCTaGGCTAAGGTCATCCTGCCA +
Preference number: 3 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHEQRNI*AKVILP
Trigger: TGGCAGGATGACCTTAGCCAAGATATTCCTCTGTTC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR TCA 72 bp CTCAATGATCTTGAGCTGCAGCTGCTCCTTTTGCAATaGCAGCTCCGTCTCCTTCTCGGCCTTGGCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LNDLELQLLLLQ*QLRLLLGLGLL
Trigger: GAGGAGGCCAAGGCCGAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 72 bp CACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATaGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGT +
Preference number: 3 (lower is better)
Translates to: HLWVSGTWSISS*CPVHSTHPRSC
Trigger: ACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp TCCAGGATGGCCTTCTCATTGGTGGTGAAGCTCTTGATGCGGTCCTTCTCCTTCAAGAGCTCCATCGTCTaGCCATGCACGGGACACTTG +
Preference number: 3 (lower is better)
Translates to: SRMAFSLVVKLLMRSFSFKSSIV*PCTGHL
Trigger: CAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTT...GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAATGAGAAGGCCATCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp TGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATTTGGTGGTGAAGCTCTaGATGCGGTCCTTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: WCPVHSTHPRSCSCSCSHLVVKL*MRSFSF
Trigger: GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAA...ATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp ATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTaGCGTAGAATGGCCGGTAGTGAGACTCAAGGGTAC +
Preference number: 3 (lower is better)
Translates to: MGLRWTQSRCLC*RRMAGSETQGY
Trigger: GTACCCTTGAGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR GCA 72 bp GATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATaGAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCG +
Preference number: 3 (lower is better)
Translates to: DSCAPGTCKGSR*RSGRSGRRAPS
Trigger: CGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 72 bp CTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATaGAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LSRCYDSCAPGT*KGSRCRSGRSG
Trigger: GCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 72 bp TCTCCTTCTCGGCCTTGGCCTCCTCCACTGTCACGGTaGTATGATTCTTGTGCTCCTGGAACATGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: SPSRPWPPPLSR*YDSCAPGTCKG
Trigger: ACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTGGAGGAGGCCAAGGCCGAGAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR-3UTR CAA 90 bp AGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGGCGCATGCATACATaGAGCAGGTCGTCCTTGAAG +
Preference number: 3 (lower is better)
Translates to: SSECWRSTPRPGRCSYLWWRMHT*SRSSLK
Trigger: CTTCAAGGACGACCTGCTCAATGTATGCATGCGCCA...CCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp GGTTGGCCTCTGAGCACAGGAATGATGGTGACCATCTaGGGTCACAAGGCAGGAAAGGAGTCTGAATGGAGT +
Preference number: 3 (lower is better)
Translates to: GWPLSTGMMVTI*GHKAGKESEWS
Trigger: ACTCCATTCAGACTCCTTTCCTGCCTTGTGACCTCAGATGGTCACCATCATTCCTGTGCTCAGAGGCCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR TCA 72 bp ATGCACCAAATTCCTGCAGAAACAACACAGAGTCGCTaGTGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCT +
Preference number: 3 (lower is better)
Translates to: MHQIPAETTQSR*CYAAAPGSACP
Trigger: AGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTTTCTGCAGGAATTTGGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp GATGGTCACCACCGTTCTCCATGTGGTTCCTCTCAATaGAGTTACGGCTCAGGTCCGCCTTGCACATCTTCT +
Preference number: 3 (lower is better)
Translates to: DGHHRSPCGSSQ*SYGSGPPCTSS
Trigger: AGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAGGAACCACATGGAGAACGGTGGTGACCATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 72 bp TCAATCTCAATGATCTTGAGCTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTCCTTCTCGGCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: SISMILSCSCSF*NDSSVSFSALA
Trigger: GGCCAAGGCCGAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 72 bp TGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAAGCTGTTCGTGTAGTT +
Preference number: 3 (lower is better)
Translates to: CQVHGVSLHGVR*TPLTPEAVRVV
Trigger: AACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 72 bp GTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATaGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGA +
Preference number: 3 (lower is better)
Translates to: VGPNPVAFVDVE*PVVRQHSLLAR
Trigger: TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CCA 72 bp GTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATaGCCGGTAGTGAGACTCAAGGGTACACTGCCTTTG +
Preference number: 3 (lower is better)
Translates to: VGPNPVAFVDVE*PVVRLKGTLPL
Trigger: CAAAGGCAGTGTACCCTTGAGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR-3UTR CAA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGAAGGATGGCCTTCTCATaGGTGGTGAAGCTCTTGATG +
Preference number: 3 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARRMAFS*VVKLLM
Trigger: CATCAAGAGCTTCACCACCAATGAGAAGGCCATCCT...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR GCA 72 bp GCTTCATCCTCAATCTCAATGATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGCTCCGTCTCCTTCTCG +
Preference number: 3 (lower is better)
Translates to: ASSSISMILSCS*SFCNDSSVSFS
Trigger: CGAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR TCA 72 bp ACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTaGATGAAATTCTGTAGGCAAATGGTAAATGGTAGC +
Preference number: 3 (lower is better)
Translates to: TLHRQRECQSVD*MKFCRQMVNGS
Trigger: GCTACCATTTACCATTTGCCTACAGAATTTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTGCTGCCTCCCCGCCGTaGCCGTTGGTGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGAASPP*PLVVLA
Trigger: TGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGC...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTCCCCGCCGTGCCCGTTaGTGGTCTTGGCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGPRRAR*WSWHPC
Trigger: GCAAGGATGCCAAGACCACCAACGGGCACGGCGGGG...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCCCGAGAGGAGGAGGCTaGCGGGTTAGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIPRGGG*RVRAGP
Trigger: GGGGCCTGCCCTAACCCGCCAGCCTCCTCCTCTCGG...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGAGCTGCCTCCCCGCCGTaGCCGTTGGTGGTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGAASPP*PLVVLA
Trigger: TGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGC...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTGTCGCCGCCACTCATTaGCCGCGAACAGGGCGCTCC +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEAVAATH*PRTGRS
Trigger: GGAGCGCCCTGTTCGCGGGCAATGAGTGGCGGCGAC...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCGCTGCAGAGGGCAGGTaGAGGACCAGGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIAAEGR*RTRLPP
Trigger: GGGAGGGAGCCTGGTCCTGCACCTGCCCTCTGCAGC...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTCCAACCCCTGCAAGCTaGCCCATCCTTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGPTPAS*PILPEP
Trigger: GGGCTCTGGAAGGATGGGCCAGCTTGCAGGGGTTGG...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTCTGGCTTCAGGGCGCTaGCCAGGCTCTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEALASGR*PGSCPQ
Trigger: CTGAGGGCAAGAGCCTGGGCAGCGCCCTGAAGCCAG...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTCTCCAGGCTGCCACTaGGGCCCGACGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALSPGCH*GPTGSG
Trigger: CCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTGGAGA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGAGCCGGACTTGGACCGTaGAAAAAGGCCCGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGAGLGP*KKARVG
Trigger: GCCGACACGGGCCTTTTTTCACGGTCCAAGTCCGGC...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTCCGCCTTCTGCTTGTTaGCGATGCAGGAGTCGCACA +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGPPSAC*RCRSRT
Trigger: TGTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGG...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGTGGTCCACAGCATCCTaGTCCCGCTGCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLWSTAS*SRCSSA
Trigger: TGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCA...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGAGGGATAGCCTTTCAGGGACGCAGGGTGCTTGGCTaGGCTGTTTCAGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GLGLGALAPHEGGIAFQGRRVLG*AVSGLL
Trigger: CAGCAAGCCTGAAACAGCTCAGCCAAGCACCCTGCG...TCCCTGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGATGCCATTCTCCAGGCTaGCACTGGGGCCCGACGGGC +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRCHSPG*HWGPTG
Trigger: GCCCGTCGGGCCCCAGTGGCAGCCTGGAGAATGGCA...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCTGCCGTCAGCCTTGGTaGCATTCTCCAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQICRQPW*HSPGCH
Trigger: GTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCA...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TTCTCCAGGTCCCGCACCAGGTCCCGGAAGTTCTGCTCCAGGATGGCCTTCTCACTGGCTTCAGGGCGCTaGCCAGGCTCTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSRSRTRSRKFCSRMAFSLASGR*PGSCPQ
Trigger: CTGAGGGCAAGAGCCTGGGCAGCGCCCTGAAGCCAG...TGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCTGGTGCGGGACCTGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGCATGCACGGGACACTTaGGGGCCTCAAAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLHARDT*GPQSPG
Trigger: TCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATG...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTTCCATCGTCTTGCCATaGACGGGACACTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEASIVLP*TGHLRA
Trigger: GGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGA...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTAGCTGCTCCCGGGTCTaGTTGTCCTCATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEASCSRV*LSSCST
Trigger: GGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCT...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACTCTCCAGGCTGCCACTaGGGCCCGACGGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: EVTAQVRLAHLLNVAHAYSPGCH*GPTGSG
Trigger: CCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTGGAGA...GTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGGCTCGAGCAGCTGGTaGTCTCGGAAGGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRGSSSW*SRKAAP
Trigger: GGGCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCCCTCAAAGTCCCGGATaGGCTCGAGCAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIPQSPG*ARAAGG
Trigger: ACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGG...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTGGGGTTCAGGATAGGTaGCCTTTCTGGCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEAGVQDR*PFWQAS
Trigger: AGACGCCTGCCAGAAAGGTCACCTATCCTGAACCCC...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGTCTCCCCGGGCTCCATaGTGGACACCGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQSPRAP*WTPWAS
Trigger: GGAAGCCCACGGTGTCCATCATGGAGCCCGGGGAGA...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTGGCTTTGGCTCCGCATaGGGGAGGGATAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEAGFGSA*GRDSLS
Trigger: TGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCC...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCACCGCCTGGGTAGGGTaGTGTCAAGACACTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQITAWVG*CQDTER
Trigger: CCTCTCAGTGTCTTGACATCACCCTACCCAGGCGGT...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAGCATCCTGCTCCCGCTaGTCCAGCGCAGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRASCSR*SSAALT
Trigger: AGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGC...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGCATCCTGCTCCCGCTaGTCCAGCGCAGCCCTCACT +
Preference number: 4 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARASCSR*SSAALT
Trigger: AGTGAGGGCTGCGCTGGAGCAGCGGGAGCAGGATGC...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGGGCTCAGGTCCGCCTTaGACATCTTCTCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLGSGPP*TSSQRG
Trigger: GCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCC...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGCTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLLHGVR*TPLTPE
Trigger: TTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAG...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGCGGAGAGGCCGGAACTaGCCCCAAGAGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLQVLPCWALIGRTRESTRRGRN*PQEAGR
Trigger: TCTGCCAGCCTCTTGGGGGCAGTTCCGGCCTCTCCG...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATTCCCTCCCCAACCCCTaGAAGCTGGCCCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHSLPNP*KLAHPS
Trigger: GGAAGGATGGGCCAGCTTGCAGGGGTTGGGGAGGGA...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCGGGACTCCGAGAAAATaGACTTGCGCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIGTPRK*TCAARP
Trigger: AGGGCGAGCTGCGCAAGTCCATTTTCTCGGAGTCCC...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGGCTCGAGCAGCTGGTaGTCTCGGAAGGCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPGSSSW*SRKAAP
Trigger: GGGCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCC...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAATGGGCTCGAGCAGCTaGTGGTCTCGGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRMGSSS*WSRKAA
Trigger: CGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCAT...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCTCAAAGTGGCTGTGGTaGAGACCCACCGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQISKWLW*RPTAWV
Trigger: TACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGA...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp AAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGGGGTGGTCTCCTTGGTaGAGCGGCCAGGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: KGTLPLALSLRELTPPGQGWSPW*SGQETR
Trigger: CCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCC...CTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGCTGGGCTCGACCCGTTaGTCCTGGAGGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALLGSTR*SWRHLQ
Trigger: CTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAG...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCAGAGCTCCATCGTCTTaGCATGCACGGGACACTTGC +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIRAPSS*HARDTC
Trigger: GCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCT...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGTGGTCCACAGCATCCTaGTCCCGCTGCTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARWSTAS*SRCSSA
Trigger: TGCGCTGGAGCAGCGGGAGCAGGATGCTGTGGACCA...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGAGCACAGGAATGGGAGAAGGAGGAGCTaGCTTGGACGACGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AGPNLSHPCDGLASEHRNGRRRS*LGRRAG
Trigger: ACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTCTCCC...ATTCCTGTGCTCAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGGGGAGAAGGAGGAGCTaGCTTGGACGACGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGGRRRS*LGRRAG
Trigger: ACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTCTCCC...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCGGGAGAAGGAGGAGCTaGCTTGGACGACGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTLPLALSLRELTPPGQLGRRRS*LGRRAG
Trigger: ACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTCTCCC...GAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGGGCATCCCTGGCTTCTaGGCTCGACCCGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLQVLPCWALIGRTRESTGIPGF*ARPVAP
Trigger: AGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCC...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATAGCGGCTCCGGGCATCCCTaGCTTCTGGGCTCGACCCGT +
Preference number: 4 (lower is better)
Translates to: CPVHSTHPRSCSCSCSHSGSGHP*LLGSTR
Trigger: ACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCC...GCTATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CCGCACCAGGTCCCGGAAGTTCTGCTCCAGGATGGCCTTCTCATTGGTGGTGAACGCCGTGCCCGTTGGTaGTCTTGGCATCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PHQVPEVLLQDGLLIGGERRARW*SWHPCR
Trigger: ACGGCAAGGATGCCAAGACCACCAACGGGCACGGCG...TTCACCACCAATGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCTGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp ATATCTTGGCTAAGGTCATCCTGCCAGTCAGGAGAAGCCACCCTCCAGGGACCATTGGCAGCCCCCAGCTaGAGCCCTGCGTACGGCGAC +
Preference number: 4 (lower is better)
Translates to: ISWLRSSCQSGEATLQGPLAAPS*SPAYGD
Trigger: GTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAA...TGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGTGGGCCTTGGGGCTTTaGCTCCGCATGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GLQVLPCWALIGRTRESTWALGL*LRMREG
Trigger: TCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCA...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGTGGGCCTTGGGGCTTTaGCTCCGCATGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQWALGL*LRMREG
Trigger: TCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCA...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTCTCATGGGGCTTCGTTaGACCCAATCCCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEALMGLR*TQSRCL
Trigger: AAGGCAACGGGATTGGGTCCAACGAAGCCCCATGAG...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGCTGCTCCTTTTGCAATaGCAGCTCCGTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLLLLLQ*QLRLLL
Trigger: GAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAG...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTTGTGGTTCCTCTCAATaGAGTTACGGCTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEACGSSQ*SYGSGP
Trigger: CGGACCTGAGCCGTAACTTCATTGAGAGGAACCACA...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGAGACGAGGGCTGGTATaGTGTCCGGACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: DAGLVGLAEELHRLAMHGRRGLV*CPDPTF
Trigger: AAAGGTGGGGTCCGGACATCATACCAGCCCTCGTCT...CCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATGGGTGGTCTCCTTGGTaGAGCGGCCAGGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: WCPVHSTHPRSCSCSCSHGWSPW*SGQETR
Trigger: CCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCC...ATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGGCAGGAAAGGAGTCTaGATGGAGTGTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHGRKGV*MECGQW
Trigger: CCACTGGCCACACTCCATTCAGACTCCTTTCCTGCC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAAGGAGGTGGGCCATGTaGATGGGAGATGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRRRWAM*MGDGWL
Trigger: CAGCCACCCATCTCCCATTCACATGGCCCACCTCCT...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACGCTCTTGCCCTCAGCTaGCTCCCCGCCGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LTTLGDRALERNVYRPGDALALS*LPAVPV
Trigger: AACGGGCACGGCGGGGAGGCAGCTGAGGGCAAGAGC...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLCSCSF*NDSSVS
Trigger: GGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCA...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCCGGTCCTTCTCCTTCTaGCACTTCTCAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIRSFSF*HFSASS
Trigger: GGATGAAGCTGAGAAGTGGCAGAAGGAGAAGGACCG...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGTTGGCCTCTGAGCACAGGAATGATGGTGACCATCTGAGGTCACAAGGCAGGCGCCGTGCCCGTTGGTaGTCTTGGCATCCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLASEHRNDGDHLRSQGRRRARW*SWHPCR
Trigger: ACGGCAAGGATGCCAAGACCACCAACGGGCACGGCG...CCTGCCTTGTGACCTCAGATGGTCACCATCATTCCTGTGCTCAGAGGCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGGGGACTCCGAGAAAATaGACTTGCGCAGCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRGTPRK*TCAARP
Trigger: AGGGCGAGCTGCGCAAGTCCATTTTCTCGGAGTCCC...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTCACATCTTCTCAACGTaGCGCATGCATACATTGAGC +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGHIFST*RMHTLS
Trigger: GCTCAATGTATGCATGCGCCACGTTGAGAAGATGTG...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGPGDEG*YDVRTP
Trigger: TGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGG...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: GTLPLALSLRELTPPGQLPGDEG*YDVRTP
Trigger: TGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGG...GAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR TCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATACTCGACAAACTGGATaGTGGGTCGCCGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHTRQTG*WVAATH
Trigger: ATGAGTGGCGGCGACCCATCATCCAGTTTGTCGAGT...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTACTGTCACGGTGCTATaGTTCTTGTGCTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEATVTVL*FLCSWN
Trigger: GTTCCAGGAGCACAAGAATCATAGCACCGTGACAGT...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGCTTCCATCGCAGGGTaGTTGGCTGAGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHASIAG*LAELFQ
Trigger: CTGAAACAGCTCAGCCAAGCACCCTGCGATGGAAGC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CTCTCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCCTGGGCTCGACCCGTTaGTCCTGGAGGCATCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSMKLRLRSALHIFSTWRLGSTR*SWRHLQ
Trigger: CTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAG...GCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCCGAGAAAATGGACTTaGGCAGCTCGCCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHPRKWT*AARPFR
Trigger: CCGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGG...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATAGCTGCTCCCGGGTCTaGTTGTCCTCATGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GSRCRSGRSGRRAPSSCHSCSRV*LSSCST
Trigger: GGTGCTGCATGAGGACAAGCAGACCCGGGAGCAGCT...ATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGAGTCGCTGATGCTATaGAGCTGCTCCCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRESLML*SCSRVC
Trigger: GCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGATCGACCCGTTGCTCCTaGAGGCATCTGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRSTRCS*RHLQLP
Trigger: TGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGA...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGACCTTGCCGTCAGCCTTaGTGCCATTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRPCRQP*CHSPGC
Trigger: GCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGG...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGCCCGTTGGTGGTCTTaGCATCCTTGCCGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRARWWS*HPCRQP
Trigger: AGGCTGACGGCAAGGATGCCAAGACCACCAACGGGC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGGCAAAGGTAACGGGTaGCTTCTTGGCAGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRGKGNG*LLGSPQ
Trigger: CTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGCAGGTCTGGTCGGTCTaGCAGAAGAGCTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGQVWSV*QKSSIV
Trigger: GACGATGGAGCTCTTCTGCCAGACCGACCAGACCTG...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTATGGGCCTTGGGGCTTTaGCTCCGCATGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVWALGL*LRMREG
Trigger: TCCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCA...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR CCA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACGGAAGAGCAGGGGTGTaGCGCCTCGTTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LTTLGDRALERNVYRPGDGRAGV*RLVPSA
Trigger: GGCGGAAGGAACGAGGCGCCACACCCCTGCTCTTCC...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAACTGCCCCCAAGAGGCTaGCAGAGGGCTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNELPPRG*QRAAEG
Trigger: GCCCTCTGCAGCCCTCTGCCAGCCTCTTGGGGGCAG...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAGGTGGGCCATGTGAATaGGAGATGGGTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRGGPCE*EMGGCA
Trigger: AGCACAGCCACCCATCTCCCATTCACATGGCCCACC...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGGTTTCCATCTGCAGTaGCCAAGGGCTGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHGFHLQ*PRAAGS
Trigger: AGAACCTGCAGCCCTTGGCCACTGCAGATGGAAACC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAATCTCCCCGGGCTCCATaGTGGACACCGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNESPRAP*WTPWAS
Trigger: GGAAGCCCACGGTGTCCATCATGGAGCCCGGGGAGA...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAACAACACAGAGTCGCTaGTGCTATGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRTTQSR*CYAAAP
Trigger: GGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGT...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGTGTGGTTCCTCTCAATaGAGTTACGGCTCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRCGSSQ*SYGSGP
Trigger: CGGACCTGAGCCGTAACTTCATTGAGAGGAACCACA...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAAGACGAGGGCTGGTATaGTGTCCGGACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRRRGLV*CPDPTF
Trigger: AAAGGTGGGGTCCGGACATCATACCAGCCCTCGTCT...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGTCCCGTTGCCTTTGTTaGCGTAGAATGGCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRSRCLC*RRMAGS
Trigger: ACTACCGGCCATTCTACGTCAACAAAGGCAACGGGA...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACTGCCGTCAGCCTTGGTaGCATTCTCCAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: EVTAQVRLAHLLNVAHAYCRQPW*HSPGCH
Trigger: GTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCA...GTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACCATGCACGGGACACTTaGGGGCCTCAAAGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EVTAQVRLAHLLNVAHAYHARDT*GPQSPG
Trigger: TCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATG...GTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: DAGLVGLAEELHRLAMHGCSCSF*NDSSVS
Trigger: GGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCA...CCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGAGGTCCCGGAAGTTCTaGTCCAGGATGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GLQVLPCWALIGRTRESTRSRKF*SRMAFS
Trigger: TGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCT...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATAGCGAGTCGCTGATGCTATaGAGCTGCTCCCGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CPVHSTHPRSCSCSCSHSESLML*SCSRVC
Trigger: GCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTC...GCTATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MECGQWGSRRGRNCPQEACQSSE*WRSTPR
Trigger: TCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACA...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTGGCTAAGGTCATCCTaGCAGTCAGGAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALWLRSS*QSGEAT
Trigger: GGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATATGTCCCCACTGTGCTaGTCCTGGTTTTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHMSPLC*SWFCLL
Trigger: GAGGAGACAAAACCAGGAGCAGCACAGTGGGGACAT...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCTCCTGGTCAGCTCCTTaGCTTTGTGTGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GTLPLALSLRELTPPGQLSWSAP*LCVVHS
Trigger: GCTGTGGACCACACAAAGGCAAGGAGCTGACCAGGA...GAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp GTGCTCCTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGCCCGTTGGTGGTCTTaGCATCCTTGCCGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLLEHAKVADAGLVGLAEARWWS*HPCRQP
Trigger: AGGCTGACGGCAAGGATGCCAAGACCACCAACGGGC...TTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGACCCCGCCGTGCCCGTTaGTGGTCTTGGCATCCTTGC +
Preference number: 4 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARPRRAR*WSWHPC
Trigger: GCAAGGATGCCAAGACCACCAACGGGCACGGCGGGG...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGAATGGGCTCGAGCAGCTaGTGGTCTCGGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVRMGSSS*WSRKAA
Trigger: CGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCAT...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGCCAAGGAGGAGCTGCCTTaGACGACGGGCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: LNAGGVLPDPGGVVTFGAKEELP*TTGRSL
Trigger: CAATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTT...GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp ACACCTCCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGAAAGGAGGAGCTGCCTTaGACGACGGGCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: TPPGQLLAFVWSTAGLEGKEELP*TTGRSL
Trigger: CAATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTT...TCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGGAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATTGGGGGATAGGGCCTTaGAGAGAAACGTCTATAGGC +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHWGIGP*RETSIG
Trigger: GCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCA...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCGGTGGCTTCTTCCCCTaGCTTCAGGGCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLIQSIHDHLHLVHSILLGGFFP*LQGAAQ
Trigger: CTGGGCAGCGCCCTGAAGCCAGGGGAAGAAGCCACC...GAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp CGGACCCCACCTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTGGGGTTCAGGATAGGTaGCCTTTCTGGCAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RTPPLGVRYMEYLFMVSGGVQDR*PFWQAS
Trigger: AGACGCCTGCCAGAAAGGTCACCTATCCTGAACCCC...ACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAGGTGGGGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATCCTCCAGGTGGGGCTTaGGATGCAGCTCGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRALERNVYPPGGA*DAARRR
Trigger: CCTTCTGCGAGCTGCATCTCAAGCCCCACCTGGAGG...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGACCTCCAGGTGGGGCTTaGGATGCAGCTCGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARPPGGA*DAARRR
Trigger: CCTTCTGCGAGCTGCATCTCAAGCCCCACCTGGAGG...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp GAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGACAACACAGAGTCGCTaGTGCTATGCAGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: EYLFMVSGALHSPPKLFVTTQSR*CYAAAP
Trigger: GGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGT...CACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGAGACGAGGGCTGGTATaGTGTCCGGACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPRRGLV*CPDPTF
Trigger: AAAGGTGGGGTCCGGACATCATACCAGCCCTCGTCT...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR TCA 90 bp CTGCAGAAACAACACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGGCTTTGGCTCCGCATaGGGGAGGGATAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LQKQHRVADAMQLLPGLLGFGSA*GRDSLS
Trigger: TGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCC...AAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTGTTGTTTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGGCTTTGGCTCCGCATaGGGGAGGGATAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPGFGSA*GRDSLS
Trigger: TGAAAGGCTATCCCTCCCTCATGCGGAGCCAAAGCC...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR TCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTCCCGTTGCCTTTGTTaGCGTAGAATGGCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALSRCLC*RRMAGS
Trigger: ACTACCGGCCATTCTACGTCAACAAAGGCAACGGGA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAAGCGGGAGAGGCAGGCTaGTACCATGCGGGTACTCAC +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNEAGEAG*YHAGTH
Trigger: GTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGC...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTTGCCAAAGTGTAGACTaGATGAAATTCTGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: RVLTASPQIQPERRRLAGCQSVD*MKFCRQ
Trigger: TTGCCTACAGAATTTCATTCAGTCTACACTTTGGCA...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTCCACAGCAGGACTTaGGGGATGCTCAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVVHSRT*GMLRPC
Trigger: GCAAGGTCTGAGCATCCCTCAAGTCCTGCTGTGGAC...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp CACTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATGCTCTTGCCCTCAGCTaGCTCCCCGCCGTGCCCGTT +
Preference number: 4 (lower is better)
Translates to: HCHGAMILVLLEHAKVADALALS*LPAVPV
Trigger: AACGGGCACGGCGGGGAGGCAGCTGAGGGCAAGAGC...ATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATCCGAGAAAATGGACTTaGGCAGCTCGCCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GSRCRSGRSGRRAPSSCHPRKWT*AARPFR
Trigger: CCGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGG...ATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTCTCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCCCGCCTTCTGCTTGTTaGCGATGCAGGAGTCGCACA +
Preference number: 4 (lower is better)
Translates to: LSMKLRLRSALHIFSTWRPPSAC*RCRSRT
Trigger: TGTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGG...GCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACAGGTGGGGCTTGAGATaGAGCTCGCAGAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LTTLGDRALERNVYRPGDRWGLR*SSQKEA
Trigger: GGCCTCCTTCTGCGAGCTGCATCTCAAGCCCCACCT...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGCTGATGCTATGCAGCTaGTCCCGGGTCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPLMLCS*SRVCLS
Trigger: GGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAG...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp TGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTAGTTGTTCACATCTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: WCPVHSTHPRSCSCSCSHLHGVR*TPLTPE
Trigger: TTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAG...ATGTGAACAACTACACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp AGTGAGACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCCTTCATGGTGTCCGGTaGACTCCACTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: SETQGYTAFGPVSQGTDTLHGVR*TPLTPE
Trigger: TTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAG...GGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp ATATCTTGGCTAAGGTCATCCTGCCAGTCAGGAGAAGCCACCCTCCAGGGACCAGGCAGGCTGATACCATaGGGGTACTCACTGCTAGCC +
Preference number: 4 (lower is better)
Translates to: ISWLRSSCQSGEATLQGPGRLIP*GYSLLA
Trigger: GGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCC...TGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAGAGATGTCCCCACTGTaGTGCTCCTGGTTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: AVCKAPFAVSPATLHRQREMSPL*CSWFCL
Trigger: GAGACAAAACCAGGAGCAGCACAGTGGGGACATCTC...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGCCCCATCGCAGGGTGCTTaGCTGAGCTGTTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LNAGGVLPDPGGVVTFGAPSQGA*LSCFRL
Trigger: AAGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGG...GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCTCGACCCGTTGCTCCTaGAGGCATCTGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LEHAKVADAGLVGLAEELSTRCS*RHLQLP
Trigger: TGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGA...GAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTACCTCAAAGTCCCGGATaGGCTCGAGCAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VIVRVLNAGGVLPDPGGVPQSPG*ARAAGG
Trigger: ACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGG...TACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTCCGGACCCCACCTTTaGGTGTCAGGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: EYLFMVSGALHSPPKLFVSGPHL*VSGTWS
Trigger: ACTCCATGTACCTGACACCCAAAGGTGGGGTCCGGA...CACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGATGCTCATCCGGACCCCACCTTTaGGTGTCAGGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: PGQLLAFVWSTAGLEGCSSGPHL*VSGTWS
Trigger: ACTCCATGTACCTGACACCCAAAGGTGGGGTCCGGA...TGAGCATCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCTTTGTTGACGTAGAATaGCCGGTAGTGAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GRERQADTMRVLTASPQIFVDVE*PVVRQH
Trigger: ATGCTGTCTCACTACCGGCCATTCTACGTCAACAAA...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp ATGGCCGGTAGTGAGACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGACTCATGGGGCTTCGTTaGACCCAATCCCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: MAGSETQGYTAFGPVSQGLMGLR*TQSRCL
Trigger: AAGGCAACGGGATTGGGTCCAACGAAGCCCCATGAG...TCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCACTACCGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGCAGGTTCTGCCATGCTaGGCATTGATAGGTAGGACG +
Preference number: 4 (lower is better)
Translates to: GLQVLPCWALIGRTRESTQVLPC*ALIGRT
Trigger: CGTCCTACCTATCAATGCCCAGCATGGCAGAACCTG...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCGACTCAAAGTGGCTGTaGTGGAGACCCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPDSKWL*WRPTAW
Trigger: CCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTC...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCGGGGAAAGCCCAAGCTaGATGTCTCCCTCCCCAACC +
Preference number: 4 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPGESPS*MSPSPT
Trigger: GGTTGGGGAGGGAGACATCCAGCTTGGGCTTTCCCC...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAAGGGTACACTGCCTTTaGCCCTGTCTCTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QGYTAFGPVSQGTDTSWSRVHCL*PCLSGN
Trigger: GTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCT...TGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR CAA 72 bp GAATGGCCGGTAGTGAGACTCAAGGGTACACTGCCTTaGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EWPVVRLKGTLP*ALSLRELTPPG
Trigger: ACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCACTACCGGCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR TCA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATCGCAGGGTGCTTGGCTaGGCTGTTTCAGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRALERNVYRRVLG*AVSGLL
Trigger: CAGCAAGCCTGAAACAGCTCAGCCAAGCACCCTGCG...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGACTGTCACGGTGCTATaGTTCTTGTGCTCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARTVTVL*FLCSWN
Trigger: GTTCCAGGAGCACAAGAATCATAGCACCGTGACAGT...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCCTTCCCGTTGCCTTTGTTaGCGTAGAATGGCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: YTAFGPVSQGTDTSWSAPSRCLC*RRMAGS
Trigger: ACTACCGGCCATTCTACGTCAACAAAGGCAACGGGA...AGGAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR TCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGATGATGGTGACCATCTaGGGTCACAAGGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALMMVTI*GHKAGK
Trigger: CTTTCCTGCCTTGTGACCTCAGATGGTCACCATCAT...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp ATATCTTGGCTAAGGTCATCCTGCCAGTCAGGAGAAGCCACCCTCCAGGGACCATGTCCAGGCATCTGCTaGCAACATTGGGGGATAGGG +
Preference number: 4 (lower is better)
Translates to: ISWLRSSCQSGEATLQGPCPGIC*QHWGIG
Trigger: CCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACA...TGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCAGGTGGGGCTTGAGATaGAGCTCGCAGAAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLIQSIHDHLHLVHSILLRWGLR*SSQKEA
Trigger: GGCCTCCTTCTGCGAGCTGCATCTCAAGCCCCACCT...GAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTGCACTCCACTTCCATCGTCTTGCCATaGACGGGACACTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LWVSGTWSISSWCPVHSTSIVLP*TGHLRA
Trigger: GGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGA...AGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTCTCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCAGAGCTCCATCGTCTTaGCATGCACGGGACACTTGC +
Preference number: 4 (lower is better)
Translates to: LSMKLRLRSALHIFSTWRRAPSS*HARDTC
Trigger: GCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCT...GCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTATGCAAAGGTAGCAGATaGAGGTCTGGTCGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVCKGSR*RSGRSG
Trigger: GCCAGACCGACCAGACCTGCATCTGCTACCTTTGCA...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGAGCACAGGAATTGTGCTCCTGGAACATaGAAAGGTAGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: AGPNLSHPCDGLASEHRNCAPGT*KGSRCR
Trigger: CCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACA...ATTCCTGTGCTCAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGAGGTCCCGGAAGTTCTaGTCCAGGATGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPRSRKF*SRMAFS
Trigger: TGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCT...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCCTGATGCTATGCAGCTaGTCCCGGGTCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPLMLCS*SRVCLS
Trigger: GGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAG...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GGCGGGTTAGGGCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGAATGCACCAAATTCCTaGAGAAACAACACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GGLGQAPTYLTPVMGWPLNAPNS*RNNTES
Trigger: CGACTCTGTGTTGTTTCTGCAGGAATTTGGTGCATT...CAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGCCCTAACCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp ATATCTTGGCTAAGGTCATCCTGCCAGTCAGGAGAAGCCACCCTCCAGGGACCACCATCGCAGGGTGCTTaGCTGAGCTGTTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ISWLRSSCQSGEATLQGPPSQGA*LSCFRL
Trigger: AAGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGG...TGGTCCCTGGAGGGTGGCTTCTCCTGACTGGCAGGATGACCTTAGCCAAGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTGGCTCCGGGCATCCCTaGCTTCTGGGCTCGACCCGT +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIGSGHP*LLGSTR
Trigger: ACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCC...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAACCGGACTCGACAAACTaGATGATGGGTCGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNEPDSTN*MMGRRH
Trigger: GTGGCGGCGACCCATCATCCAGTTTGTCGAGTCCGG...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGCCTCATGCAGCACCTTaGCTCTCTCATCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EYLFMVSGALHSPPKLFVPHAAP*LSHPEH
Trigger: ATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGG...CACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCA +
Preference number: 4 (lower is better)
Translates to: HLLTTLGDRALERNVYRPPGDEG*YDVRTP
Trigger: TGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGG...AGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GGGTTGGCCTCTGAGCACAGGAATGATGGTGACCATCTGAGGTCACAAGGCAGGCAGAGTTCTGAATGCTaGAGGAGTACTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: GLASEHRNDGDHLRSQGRQSSEC*RSTPRP
Trigger: GGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTG...CCTGCCTTGTGACCTCAGATGGTCACCATCATTCCTGTGCTCAGAGGCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp ACACCTCCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGACAGAGTTCTGAATGCTaGAGGAGTACTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: TPPGQLLAFVWSTAGLEGQSSEC*RSTPRP
Trigger: GGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTG...TCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGGAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACCCAGATTTCCAAGTCTaGGGCTGGGCCTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LTTLGDRALERNVYRPGDPDFQV*GWALGL
Trigger: AAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGG...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp CTCTCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCCTCATGGGGCTTCGTTaGACCCAATCCCGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSMKLRLRSALHIFSTWRLMGLR*TQSRCL
Trigger: AAGGCAACGGGATTGGGTCCAACGAAGCCCCATGAG...GCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCATGCATACGGCAAAGGTAACGGGTaGCTTCTTCCCCTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EVTAQVRLAHLLNVAHAYGKGNG*LLPLAS
Trigger: TGAAGCCAGGGGAAGAAGCCACCCGTTACCTTTGCC...GTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCCTCTCCTTGCCTTTGTGTaGTCCACAGCAGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: YTAFGPVSQGTDTSWSAPLLAFV*STAGLE
Trigger: CTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAG...AGGAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
3UTR CAA 72 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTaGGAGAGAAACGTCTATAGGCCTGGAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRA*ERNVYRPGDSR
Trigger: CCTGCTGTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 72 bp GAGACGGGAGATGTCCCCACTGTGCTGCTCCTGGTTTaGTCTCCTCTCCAATCCTTGAGCACCCTGATATGC +
Preference number: 4 (lower is better)
Translates to: ETGDVPTVLLLV*SPLQSLSTLIC
Trigger: GCATATCAGGGTGCTCAAGGATTGGAGAGGAGACAAAACCAGGAGCAGCACAGTGGGGACATCTCCCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 72 bp GGAGGGATAGCCTTTCAGGGAGAAGGAGGAGCTGCCTaGGACGACGGGCAGGTCATTGTCAGAGTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GGIAFQGEGGAA*DDGQVIVRVLN
Trigger: ATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTCTCCCTGAAAGGCTATCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTGGGTGGTCTCCTTGGTaGAGCGGCCAGGAGACGAGG +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIGWSPW*SGQETR
Trigger: CCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCC...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTCATTGTCAGAGTTCTaGATGCTGGAGGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALSLSEF*MLEEYS
Trigger: GGAGTACTCCTCCAGCATTCAGAACTCTGACAATGA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp CCGCACCAGGTCCCGGAAGTTCTGCTCCAGGATGGCCTTCTCATTGGTGGTGAATCATTGTCAGAGTTCTaGATGCTGGAGGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: PHQVPEVLLQDGLLIGGESLSEF*MLEEYS
Trigger: GGAGTACTCCTCCAGCATTCAGAACTCTGACAATGA...TTCACCACCAATGAGAAGGCCATCCTGGAGCAGAACTTCCGGGACCTGGTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGATGTCTCTCAGGGAACTaGCACCTCCTGGTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVRCLSGN*HLLVSS
Trigger: GGAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACA...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp AGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGGCTTCCATCGCAGGGTaGTTGGCTGAGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSECWRSTPRPGRCSYLWASIAG*LAELFQ
Trigger: CTGAAACAGCTCAGCCAAGCACCCTGCGATGGAAGC...CCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTCTCAATGAAGTTACGGCTCAGGTCCGCCTTGCACATCTTCTCAACGTGGCGCCGGTCCTTCTCCTTCTaGCACTTCTCAGCTTCATCC +
Preference number: 4 (lower is better)
Translates to: LSMKLRLRSALHIFSTWRRSFSF*HFSASS
Trigger: GGATGAAGCTGAGAAGTGGCAGAAGGAGAAGGACCG...GCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTACTCACTTCCTCCTTTTaGTTCTCCAGGTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: VIVRVLNAGGVLPDPGGVLTSSF*FSRSRT
Trigger: GGTGCGGGACCTGGAGAAGCAAAAGGAGGAAGTGAG...TACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGAGGCTCAGGTCCGCCTTaGACATCTTCTCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARGSGPP*TSSQRG
Trigger: GCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCC...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQCQSSE*WRSTPR
Trigger: TCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACA...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GGGTTGGCCTCTGAGCACAGGAATGATGGTGACCATCTGAGGTCACAAGGCAGGTGGAGTATCTCTTCATaGTGTCCGGTGCACTCCACT +
Preference number: 4 (lower is better)
Translates to: GLASEHRNDGDHLRSQGRWSISS*CPVHST
Trigger: AGTGGAGTGCACCGGACACCATGAAGAGATACTCCA...CCTGCCTTGTGACCTCAGATGGTCACCATCATTCCTGTGCTCAGAGGCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp ACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTGGAGTATCTCTTCATaGTGTCCGGTGCACTCCACT +
Preference number: 4 (lower is better)
Translates to: TQGYTAFGPVSQGTDTSWWSISS*CPVHST
Trigger: AGTGGAGTGCACCGGACACCATGAAGAGATACTCCA...CCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp TTGCCAGATTTCCAAGTCTGGGGCTGGGCCTTGGGGCTTTGGCTCCGCATGAGGTGGGTGTCAGGTACATaGAGTATCTCTTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LPDFQVWGWALGLWLRMRWVSGT*SISSWC
Trigger: ACACCATGAAGAGATACTCCATGTACCTGACACCCA...CCTCATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTACAGAGTTCTGAATGCTaGAGGAGTACTCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVQSSEC*RSTPRP
Trigger: GGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTG...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR CCA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAAGGAGGAGCTGCCTTaGACGACGGGCAGGTCATTG +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRALERNVYKEELP*TTGRSL
Trigger: CAATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTT...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACCAGATTTCCAAGTCTaGGGCTGGGCCTTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVRPDFQV*GWALGL
Trigger: AAGCCCCAAGGCCCAGCCCCAGACTTGGAAATCTGG...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCACCCCTGTGATGGGTTaGCCTCTGAGCACAGGAATG +
Preference number: 4 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPTPVMG*PLSTGM
Trigger: CATTCCTGTGCTCAGAGGCCAACCCATCACAGGGGT...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTGCCGGACTTGGACCGTaGAAAAAGGCCCGTGTCGGC +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIAGLGP*KKARVG
Trigger: GCCGACACGGGCCTTTTTTCACGGTCCAAGTCCGGC...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TCCAGGATGGCCTTCTCATTGGTGGTGAAGCTCTTGATGCGGTCCTTCTCCTTCCTGCTCCTTTTGCAATaGCAGCTCCGTCTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRMAFSLVVKLLMRSFSFLLLLQ*QLRLLL
Trigger: GAGAAGGAGACGGAGCTGTCATTGCAAAAGGAGCAG...GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAATGAGAAGGCCATCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGTGATGTCAAGACACTaGGAGGTTTCCATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRVMSRH*EVSICS
Trigger: ACTGCAGATGGAAACCTCTCAGTGTCTTGACATCAC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTTCTGCTTGTTGCCGATaGAGGAGTCGCACAGCACCT +
Preference number: 4 (lower is better)
Translates to: HLLTTLGDRALERNVYRPSACCR*RSRTAP
Trigger: AGGTGCTGTGCGACTCCTGCATCGGCAACAAGCAGA...AGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACAGCATAGTCTGCTTGCCAGATCTGCTTGTTGCCGATaGAGGAGTCGCACAGCACCT +
Preference number: 4 (lower is better)
Translates to: AFVDVEWPVVRQHSLLARSACCR*RSRTAP
Trigger: AGGTGCTGTGCGACTCCTGCATCGGCAACAAGCAGA...TCTGGCAAGCAGACTATGCTGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAAGACTTGACCGCCTTCTaGTTGTTGCCGATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNEDLTAF*LLPMQE
Trigger: CTCCTGCATCGGCAACAAGCAGAAGGCGGTCAAGTC...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAATGCAAAGGTAGCAGATaGAGGTCTGGTCGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNECKGSR*RSGRSG
Trigger: GCCAGACCGACCAGACCTGCATCTGCTACCTTTGCA...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCTGTGCTCCTGGAACATaGAAAGGTAGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: LEHAKVADAGLVGLAEELCAPGT*KGSRCR
Trigger: CCTGCATCTGCTACCTTTGCATGTTCCAGGAGCACA...GAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGGGGGAGAGAGTAATTaGTCATCAATGCACCAAATT +
Preference number: 4 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHGGESN*SSMHQI
Trigger: AATTTGGTGCATTGATGAGCAATTACTCTCTCCCCC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGATGCTCAACCACCAGCATAGTCTaGTTGCCAGATTTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PGQLLAFVWSTAGLEGCSTTSIV*LPDFQV
Trigger: GACTTGGAAATCTGGCAAGCAGACTATGCTGGTGGT...TGAGCATCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp CACTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATCCTTGCCGTCAGCCTTaGTGCCATTCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HCHGAMILVLLEHAKVADPCRQP*CHSPGC
Trigger: GCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGG...ATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GTGCTCCTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAATGATCACCTTCACTTaGTCCACAGCATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VLLEHAKVADAGLVGLAEMITFT*STASCS
Trigger: GGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCAT...TTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTGGGTGTCAGGTACATaGAGTATCTCTTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALWVSGT*SISSWC
Trigger: ACACCATGAAGAGATACTCCATGTACCTGACACCCA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVILSCS*SFCNDS
Trigger: GCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGAT...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGGGGGGAGAGAGTAATTaGTCATCAATGCACCAAATT +
Preference number: 4 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQGGESN*SSMHQI
Trigger: AATTTGGTGCATTGATGAGCAATTACTCTCTCCCCC...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAACTGCAGGTTCTGCCATaGTGGGCATTGATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QPSHTPSPERMPKCRLNELQVLP*WALIGR
Trigger: CCTACCTATCAATGCCCAGCATGGCAGAACCTGCAG...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACTCAAGGGTACACTGCCTTTGGACTCAAGGGTACACTaGCTTTGGCCCTGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: AFVDVEWPVVRLKGTLPLDSRVH*LWPCLS
Trigger: TGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTC...CAAAGGCAGTGTACCCTTGAGTCTCACTACCGGCCATTCTACGTCAACAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCATGATCACCTTCACTTaGTCCACAGCATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPMITFT*STASCS
Trigger: GGAGCAGGATGCTGTGGACCAAGTGAAGGTGATCAT...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATCCTCATGCAGCACCTTaGCTCTCTCATCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRALERNVYPHAAP*LSHPEH
Trigger: ATGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGG...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GTGCTCCTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAACACATCTTCTCAACGTaGCGCATGCATACATTGAGC +
Preference number: 4 (lower is better)
Translates to: VLLEHAKVADAGLVGLAEHIFST*RMHTLS
Trigger: GCTCAATGTATGCATGCGCCACGTTGAGAAGATGTG...TTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAGGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp CTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGCCCCACCGTTCTCCATGTaGTTCCTCTCAATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: LNAGGVLPDPGGVVTFGAPPFSM*FLSMKL
Trigger: TAACTTCATTGAGAGGAACCACATGGAGAACGGTGG...GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp GTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTATGGAGTATCTCTTCATaGTGTCCGGTGCACTCCACT +
Preference number: 4 (lower is better)
Translates to: VIVRVLNAGGVLPDPGGVWSISS*CPVHST
Trigger: AGTGGAGTGCACCGGACACCATGAAGAGATACTCCA...TACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp GTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACTCTCATTGTCAGAGTTCTaGATGCTGGAGGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: VGPNPVAFVDVEWPVVRLSLSEF*MLEEYS
Trigger: GGAGTACTCCTCCAGCATTCAGAACTCTGACAATGA...GAGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp CACTGTCACGGTGCTATGATTCTTGTGCTCCTGGAACATGCAAAGGTAGCAGATGACTTGACCGCCTTCTaGTTGTTGCCGATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HCHGAMILVLLEHAKVADDLTAF*LLPMQE
Trigger: CTCCTGCATCGGCAACAAGCAGAAGGCGGTCAAGTC...ATCTGCTACCTTTGCATGTTCCAGGAGCACAAGAATCATAGCACCGTGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCCTCCACTGTCACGGTaGTATGATTCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWVSGTWSISSWCPVHSTPPLSR*YDSCAP
Trigger: AGGAGCACAAGAATCATAGCACCGTGACAGTGGAGG...AGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGC +
Preference number: 4 (lower is better)
Translates to: LTTLGDRALERNVYRPGDILSCS*SFCNDS
Trigger: GCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGAT...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTCAGGTCTGGTCGGTCTaGCAGAAGAGCTCCATCGTC +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIQVWSV*QKSSIV
Trigger: GACGATGGAGCTCTTCTGCCAGACCGACCAGACCTG...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GTGAGACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTTGGGTGTCAGGTACATaGAGTATCTCTTCATGGTGT +
Preference number: 4 (lower is better)
Translates to: VRLKGTLPLALSLRELTPWVSGT*SISSWC
Trigger: ACACCATGAAGAGATACTCCATGTACCTGACACCCA...AGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGTTTGTTGACGTAGAATaGCCGGTAGTGAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPFVDVE*PVVRQH
Trigger: ATGCTGTCTCACTACCGGCCATTCTACGTCAACAAA...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTCCGCCAGGAGCTCATaGGGCTTCGTTGGACCCAAT +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWISARSS*GFVGPN
Trigger: ATTGGGTCCAACGAAGCCCCATGAGCTCCTGGCGGA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
3UTR CAA 72 bp GCCTTGCACATCTTCTCAACGTGGCGCATGCATACATaGAGCAGGTCGTCCTTGAAGTTGCCTAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: ALHIFSTWRMHT*SRSSLKLPSDC
Trigger: ACAGTCACTAGGCAACTTCAAGGACGACCTGCTCAATGTATGCATGCGCCACGTTGAGAAGATGTGCAAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
3UTR CAA 72 bp TGGTTCCTCTCAATGAAGTTACGGCTCAGGTCCGCCTaGCACATCTTCTCAACGTGGCGCATGCATACATTG +
Preference number: 4 (lower is better)
Translates to: WFLSMKLRLRSA*HIFSTWRMHTL
Trigger: CAATGTATGCATGCGCCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCGTAACTTCATTGAGAGGAACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTCTCACTTCCTCCTTTTaGTTCTCCAGGTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWILTSSF*FSRSRT
Trigger: GGTGCGGGACCTGGAGAAGCAAAAGGAGGAAGTGAG...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp GTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACTCAAGGGTACACTGCCTTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VAFVDVEWPVVRLKGTLPCQSSE*WRSTPR
Trigger: TCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACA...AGGCAGTGTACCCTTGAGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTCCGGACCCCACCTTTaGGTGTCAGGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWISGPHL*VSGTWS
Trigger: ACTCCATGTACCTGACACCCAAAGGTGGGGTCCGGA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp GTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACTCTTTGTTGACGTAGAATaGCCGGTAGTGAGACTCAAG +
Preference number: 4 (lower is better)
Translates to: VGPNPVAFVDVEWPVVRLFVDVE*PVVRLK
Trigger: CTTGAGTCTCACTACCGGCCATTCTACGTCAACAAA...GAGTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR GCA 90 bp TCCAGGATGGCCTTCTCATTGGTGGTGAAGCTCTTGATGCGGTCCTTCTCCTTCTCAATGATCTTGAGCTaGAGCTGCTCCTTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SRMAFSLVVKLLMRSFSFSMILS*SCSFCN
Trigger: ATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGA...GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAATGAGAAGGCCATCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR GCA 90 bp TCCAGGATGGCCTTCTCATTGGTGGTGAAGCTCTTGATGCGGTCCTTCTCCTTCAATGCACCAAATTCCTaGAGAAACAACACAGAGTCG +
Preference number: 4 (lower is better)
Translates to: SRMAFSLVVKLLMRSFSFNAPNS*RNNTES
Trigger: CGACTCTGTGTTGTTTCTGCAGGAATTTGGTGCATT...GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAATGAGAAGGCCATCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCTGCCATAGAGATTGTTaGAATTCTTCTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLIQSIHDHLHLVHSILLCHRDC*NSSGWS
Trigger: AGACCACCCAGAAGAATTTCAACAATCTCTATGGCA...GAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR TCA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGATGCCATAGAGATTGTTaGAATTCTTCTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVRCHRDC*NSSGWS
Trigger: AGACCACCCAGAAGAATTTCAACAATCTCTATGGCA...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS-3UTR GCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTCCTCCACTGTCACGGTaGTATGATTCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIPPLSR*YDSCAP
Trigger: AGGAGCACAAGAATCATAGCACCGTGACAGTGGAGG...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTTCAATGATCTTGAGCTaGAGCTGCTCCTTTTGCAAT +
Preference number: 4 (lower is better)
Translates to: HLLTTLGDRALERNVYRPSMILS*SCSFCN
Trigger: ATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGA...AGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR GCA 90 bp CATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGGCCAGTAGCTATTTaGATGGGTGGATTATATCAT +
Preference number: 4 (lower is better)
Translates to: HLLTTLGDRALERNVYRPGPVAI*MGGLYH
Trigger: ATGATATAATCCACCCATGCAAATAGCTACTGGCCC...AGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATATGGTAAATGGTAGCTaGGCCAGTAGCTATTTGCAT +
Preference number: 4 (lower is better)
Translates to: SRHLLTTLGDRALERNVYMVNGS*ASSYLH
Trigger: ATGCAAATAGCTACTGGCCCAGCTACCATTTACCAT...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTCCACCGTTCTCCATGTaGTTCCTCTCAATGAAGTTA +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIPPFSM*FLSMKL
Trigger: TAACTTCATTGAGAGGAACCACATGGAGAACGGTGG...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR TCA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTGCCATAGAGATTGTTaGAATTCTTCTGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: CRQMVNGSWASSYLHGWICHRDC*NSSGWS
Trigger: AGACCACCCAGAAGAATTTCAACAATCTCTATGGCA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CCA 90 bp CAGGCTGCCACTGGGGCCCGACGGGCTCCGGGCATCCCTGGCTTCTaGGCTCGACCCGTTGCTCCTGGAGGCATCTGCAGCTTCCATCGC +
Preference number: 5 (lower is better)
Translates to: QAATGARRAPGIPGF*ARPVAPGGICSFHR
Trigger: GCGATGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS TCA 90 bp GGCAGAGGAGCCGCCCCCACGGCCCCAGGCACAGGTGTGGGCTACTaGATCAGCAGTGCCCATCCCTGCTCCTGCTTGCCACCTCGCCAC +
Preference number: 5 (lower is better)
Translates to: GRGAAPTAPGTGVGY*ISSAHPCSCLPPRH
Trigger: GTGGCGAGGTGGCAAGCAGGAGCAGGGATGGGCACTGCTGATTCAGTAGCCCACACCTGTGCCTGGGGCCGTGGGGGCGGCTCCTCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 90 bp GGCCCGACGGGCTCCGGGCATCCCTGGCTTCTGGGCTCGACCCGTTaGTCCTGGAGGCATCTGCAGCTTCCATCGCAGGGTGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GPTGSGHPWLLGSTR*SWRHLQLPSQGAWL
Trigger: CAGCCAAGCACCCTGCGATGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS CCA 90 bp TGGCATCCTTGCCGTCAGCCTTGGTGCCATTCTCCAGGCTGCCACTaGGGCCCGACGGGCTCCGGGCATCCCTGGCTTCTGGGCTCGACC +
Preference number: 5 (lower is better)
Translates to: WHPCRQPWCHSPGCH*GPTGSGHPWLLGST
Trigger: GGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGATGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 90 bp CATTCTCCAGGCTGCCACTGGGGCCCGACGGGCTCCGGGCATCCCTaGCTTCTGGGCTCGACCCGTTGCTCCTGGAGGCATCTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: HSPGCHWGPTGSGHP*LLGSTRCSWRHLQL
Trigger: AAGCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTGGAGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 90 bp ACGGGACACTTGCGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGCTaGTGGTCTCGGAAGGCGGCGCCCTCCAGGTGGGGCTTGAGATGC +
Preference number: 5 (lower is better)
Translates to: TGHLRASKSRMGSSS*WSRKAAPSRWGLRC
Trigger: GCATCTCAAGCCCCACCTGGAGGGCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS TCA 90 bp GATGCAGGAGTCGCACAGCACCTCCTCGGAGCCGGACTTGGACCGTaGAAAAAGGCCCGTGTCGGCCCGGGGGTAGCTGTTCCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: DAGVAQHLLGAGLGP*KKARVGPGVAVPPG
Trigger: ACCCGGCGGAACAGCTACCCCCGGGCCGACACGGGCCTTTTTTCACGGTCCAAGTCCGGCTCCGAGGAGGTGCTGTGCGACTCCTGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS GCA 90 bp CGCCCCCACGGCCCCAGGCACAGGTGTGGGCTACTGAATCAGCAGTaGCCATCCCTGCTCCTGCTTGCCACCTCGCCACACACCTCGTAC +
Preference number: 5 (lower is better)
Translates to: RPHGPRHRCGLLNQQ*PSLLLLATSPHTSY
Trigger: GTACGAGGTGTGTGGCGAGGTGGCAAGCAGGAGCAGGGATGGGCACTGCTGATTCAGTAGCCCACACCTGTGCCTGGGGCCGTGGGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp GGCTCTTGCCCTCAGCTGCCTCCCCGCCGTGCCCGTTGGTGGTCTTaGCATCCTTGCCGTCAGCCTTGGTGCCATTCTCCAGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: GSCPQLPPRRARWWS*HPCRQPWCHSPGCH
Trigger: GTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGCTGAGGGCAAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 90 bp TCGTCTTGCCATGCACGGGACACTTGCGGGCCTCAAAGTCCCGGATaGGCTCGAGCAGCTGGTGGTCTCGGAAGGCGGCGCCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SSCHARDTCGPQSPG*ARAAGGLGRRRPPG
Trigger: ACCTGGAGGGCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS TCA 90 bp CTGGGTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTGGTATaGTGTCCGGACCCCACCCAAAGGCACAGCACCCCAGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGGLLGEAARRRGLV*CPDPTQRHSTPGRE
Trigger: CTCCCTGCCTGGGGTGCTGTGCCTTTGGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524956.4
CDS CCA 90 bp ACGGGCTCCGGGCATCCCTGGCTTCTGGGCTCGACCCGTTGCTCCTaGAGGCATCTGCAGCTTCCATCGCAGGGTGCTTGGCTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: TGSGHPWLLGSTRCS*RHLQLPSQGAWLSC
Trigger: ACAGCTCAGCCAAGCACCCTGCGATGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS-3UTR CAA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTCCATGCACGGGACACTaGCGGGCCTCAAAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: MECGQWGSRRGRNCPQEAPCTGH*RASKSR
Trigger: CCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGG...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS GCA 90 bp CGTCTGGTCCTGCCTTTCCCAAAGGGGCGCCTGCAGGATTGGATCTaGAGGATGCTGGCAGGTGCCCCATGGCCACAGGACCCTAGAGCC +
Preference number: 5 (lower is better)
Translates to: RLVLPFPKGRLQDWI*RMLAGAPWPQDPRA
Trigger: GGCTCTAGGGTCCTGTGGCCATGGGGCACCTGCCAGCATCCTGCAGATCCAATCCTGCAGGCGCCCCTTTGGGAAAGGCAGGACCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 90 bp CAAGGCTGTACTCTCAAGGCCCCGTGCAACGCCTGGGACACCGGGTaGGGCCTTGGGGAAAGTGCCCAGGCTTCAGGCCCTAAAGGGACT +
Preference number: 5 (lower is better)
Translates to: QGCTLKAPCNAWDTG*GLGESAQASGPKGT
Trigger: AGTCCCTTTAGGGCCTGAAGCCTGGGCACTTTCCCCAAGGCCCCACCCGGTGTCCCAGGCGTTGCACGGGGCCTTGAGAGTACAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp CCTACAGAGCAGGAGAGACCCGCAGGAGCCTGTCAGGGCACTCGATaGCACCCCAGGGCCTGGTCCATGGATGGAAGGGAGAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: PTEQERPAGACQGTR*HPRAWSMDGRERQE
Trigger: CTCCTGTCTCTCCCTTCCATCCATGGACCAGGCCCTGGGGTGCCATCGAGTGCCCTGACAGGCTCCTGCGGGTCTCTCCTGCTCTGTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS CCA 90 bp TGCTGTTCCCTCCACCCCCTCCCACAACCTGCAGGAGGCTCACACTaGGCCCTCAGTCTCCTACAGAGCAGGAGAGACCCGCAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: CCSLHPLPQPAGGSH*ALSLLQSRRDPQEP
Trigger: AGGCTCCTGCGGGTCTCTCCTGCTCTGTAGGAGACTGAGGGCCCAGTGTGAGCCTCCTGCAGGTTGTGGGAGGGGGTGGAGGGAACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS-3UTR CAA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGGGTCGCCGCCACTCATaGCCCGCGAACAGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: GLQVLPCWALIGRTRESTGRRHS*PANRAL
Trigger: GAGCGCCCTGTTCGCGGGCAATGAGTGGCGGCGACC...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp GCACCGCCAGGCTGCCAGTTGGGTTGGCCCTTCCCAGGTTGGCACTaGGCAAGGAGGAGGGGGAGGAGACAGAGCAAAGAACCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: APPGCQLGWPFPGWH*ARRRGRRQSKEPGS
Trigger: AGACCCAGGTTCTTTGCTCTGTCTCCTCCCCCTCCTCCTTGCTCAGTGCCAACCTGGGAAGGGCCAACCCAACTGGCAGCCTGGCGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS TCA 90 bp CTGAGAGCGGCCACCTCCCCTGCCAGGTGCTCTGTGGGCCAGGCTTaGGCAGAGAGCAGAAAGGCGCCTGCTAGAAGCCAAACAGGCCAA +
Preference number: 5 (lower is better)
Translates to: LRAATSPARCSVGQA*AESRKAPARSQTGQ
Trigger: TTGGCCTGTTTGGCTTCTAGCAGGCGCCTTTCTGCTCTCTGCTCAAGCCTGGCCCACAGAGCACCTGGCAGGGGAGGTGGCCGCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS GCA 90 bp CGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGACACTTaGGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGCTGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RSGRRAPSSCHARDT*GPQSPGWARAAGGL
Trigger: GAGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 90 bp CAGGTGTGGGCTACTGAATCAGCAGTGCCCATCCCTGCTCCTGCTTaGCACCTCGCCACACACCTCGTACAGGACGCAGGGCCACACCTG +
Preference number: 5 (lower is better)
Translates to: QVWATESAVPIPAPA*HLATHLVQDAGPHL
Trigger: CAGGTGTGGCCCTGCGTCCTGTACGAGGTGTGTGGCGAGGTGGCAAGCAGGAGCAGGGATGGGCACTGCTGATTCAGTAGCCCACACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 90 bp TCCTGCCTTTCCCAAAGGGGCGCCTGCAGGATTGGATCTGCAGGATaGTGGCAGGTGCCCCATGGCCACAGGACCCTAGAGCCAGCCAAC +
Preference number: 5 (lower is better)
Translates to: SCLSQRGACRIGSAG*WQVPHGHRTLEPAN
Trigger: GTTGGCTGGCTCTAGGGTCCTGTGGCCATGGGGCACCTGCCAGCATCCTGCAGATCCAATCCTGCAGGCGCCCCTTTGGGAAAGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 90 bp CGAGTCCCTGGTCTGGTGGGCAGGCTAGCATCGGGGAGGAGTGGATaGTCACTCCACTGTCTGACTCACCGGCCACCACCTCCTAGAGCA +
Preference number: 5 (lower is better)
Translates to: RVPGLVGRLASGRSG*SLHCLTHRPPPPRA
Trigger: TGCTCTAGGAGGTGGTGGCCGGTGAGTCAGACAGTGGAGTGACCATCCACTCCTCCCCGATGCTAGCCTGCCCACCAGACCAGGGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp GATGAAGTGGCCTGGTGTCTCTTAGCGCAGGGGCCTTTGAGGGTGTaGACGAGTCCCTGGTCTGGTGGGCAGGCTAGCATCGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: DEVAWCLLAQGPLRV*TSPWSGGQASIGEE
Trigger: CTCCTCCCCGATGCTAGCCTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCAGGCCACTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp GCTCTCCCTCTGCACTGTGGAATCACTCCCGCAGGAGGCAGGTGGTaGGAGAAGGCCTTGGCCTCAGCATTCCCCTGCCCTTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ALPLHCGITPAGGRW*EKALASAFPCPCVL
Trigger: GAGGACACAAGGGCAGGGGAATGCTGAGGCCAAGGCCTTCTCCCACCACCTGCCTCCTGCGGGAGTGATTCCACAGTGCAGAGGGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 90 bp TGCCTTTCCCAAAGGGGCGCCTGCAGGATTGGATCTGCAGGATGCTaGCAGGTGCCCCATGGCCACAGGACCCTAGAGCCAGCCAACGCT +
Preference number: 5 (lower is better)
Translates to: CLSQRGACRIGSAGC*QVPHGHRTLEPANA
Trigger: AGCGTTGGCTGGCTCTAGGGTCCTGTGGCCATGGGGCACCTGCCAGCATCCTGCAGATCCAATCCTGCAGGCGCCCCTTTGGGAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS-3UTR CAA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGCTGGGCCTTGGGGCTTaGGCTCCGCATGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQLGLGA*APHEGG
Trigger: CCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAG...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGGTCTGGGGCTGGGCCTaGGGGCTTTGGCTCCGCATG +
Preference number: 5 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGVWGWA*GLWLRM
Trigger: CATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGAC...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS TCA 90 bp GGTGCTTGGCTGAGCTGTTTCAGGCTTGCTGGGGTTCAGGATAGGTaGCCTTTCTGGCAGGCGTCTCGGCAGGGAGTGGGGCAGGCAACC +
Preference number: 5 (lower is better)
Translates to: GAWLSCFRLAGVQDR*PFWQASRQGVGQAT
Trigger: GGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCCCAGCAAGCCTGAAACAGCTCAGCCAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS TCA 90 bp GTCTGTCTCGGGAAAGCCCCTCTCCTGCCCTGCTCTAAGCGAGGATaGGCAGGTCAGGCTCATGATGAGCACCGCCAGGCTGCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: VCLGKAPLLPCSKRG*AGQAHDEHRQAASW
Trigger: CCAACTGGCAGCCTGGCGGTGCTCATCATGAGCCTGACCTGCTCATCCTCGCTTAGAGCAGGGCAGGAGAGGGGCTTTCCCGAGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 90 bp ATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATaGACGGGACACTTGCGGGCCTCAAAGTCCCGGATGGGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: MQVWSVWQKSSIVLP*TGHLRASKSRMGSS
Trigger: GCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 90 bp GGCAAGCCCAAGAGGCCTGGAGCAGGTGCGCTCTCTGAGCTTGGTTaGAAAGATGCTAGTCTAAGACGGGGCCGCCTTGACTCCCTGCGC +
Preference number: 5 (lower is better)
Translates to: GKPKRPGAGALSELG*KDASLRRGRLDSLR
Trigger: GCGCAGGGAGTCAAGGCGGCCCCGTCTTAGACTAGCATCTTTGCAACCAAGCTCAGAGAGCGCACCTGCTCCAGGCCTCTTGGGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 90 bp CCTGCCAGAGTTTCCCGGCAGGAGGCGCTCACTTGGACTCCCCTGTaGTGTTTGGACGATGCTTCCCATTCACGGAGCCCCACTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PARVSRQEALTWTPL*CLDDASHSRSPTCA
Trigger: GGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCGGGAAACTCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 90 bp TTCTTCTGGGTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCACCCAAAGGCACAGCACCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: FFWVVSLVKRPGDEG*YDVRTPPKGTAPQA
Trigger: TGCCTGGGGTGCTGTGCCTTTGGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCACCCAGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524956.4
CDS CCA 90 bp TGGTGTCTCTTAGCGCAGGGGCCTTTGAGGGTGTGGACGAGTCCCTaGTCTGGTGGGCAGGCTAGCATCGGGGAGGAGTGGATGGTCACT +
Preference number: 5 (lower is better)
Translates to: WCLLAQGPLRVWTSP*SGGQASIGEEWMVT
Trigger: AGTGACCATCCACTCCTCCCCGATGCTAGCCTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp ATGGCTCTCCCTCTGCACTGTGGAATCACTCCCGCAGGAGGCAGGTaGTGGGAGAAGGCCTTGGCCTCAGCATTCCCCTGCCCTTGTGTC +
Preference number: 5 (lower is better)
Translates to: MALPLHCGITPAGGR*WEKALASAFPCPCV
Trigger: GACACAAGGGCAGGGGAATGCTGAGGCCAAGGCCTTCTCCCACCACCTGCCTCCTGCGGGAGTGATTCCACAGTGCAGAGGGAGAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 90 bp AGCCTGAAGCATAGGCATGGGCAGAGCGGGTGCCGGACCTCCAAATaGCTCTCCCTCTGCACTGTGGAATCACTCCCGCAGGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SLKHRHGQSGCRTSK*LSLCTVESLPQEAG
Trigger: ACCTGCCTCCTGCGGGAGTGATTCCACAGTGCAGAGGGAGAGCCATTTGGAGGTCCGGCACCCGCTCTGCCCATGCCTATGCTTCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS-3UTR CAA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGTCCCCGCCGTGCCCGTaGGTGGTCTTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARSPPCP*VVLASL
Trigger: CAAGGATGCCAAGACCACCAACGGGCACGGCGGGGA...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCCCTCCAGGTGGGGCTaGAGATGCAGCTCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHPSRWG*RCSSQK
Trigger: CTTCTGCGAGCTGCATCTCAAGCCCCACCTGGAGGG...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGCCATGCACGGGACACTaGCGGGCCTCAAAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGPCTGH*RASKSR
Trigger: CCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGG...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCACTGGGCCTTGGGGCTTaGGCTCCGCATGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QGYTAFGPVSQGTDTSWSLGLGA*APHEGG
Trigger: CCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAG...TGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CAA 90 bp TACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCCTGTCTGGGGCTGGGCCTaGGGGCTTTGGCTCCGCATG +
Preference number: 5 (lower is better)
Translates to: YTAFGPVSQGTDTSWSAPVWGWA*GLWLRM
Trigger: CATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGAC...AGGAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CAA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCTGTGTAAGGCACCTTTaGCGGTCAGCCCAGCCACAC +
Preference number: 5 (lower is better)
Translates to: GRERQADTMRVLTASPQICVRHL*RSAQPH
Trigger: GTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACA...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS GCA 90 bp AGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTaGCATGCACGGGACACTTGCGGGCCTCAAAGTCCCGGATGGGCT +
Preference number: 5 (lower is better)
Translates to: SRCRSGRSGRRAPSS*HARDTCGPQSPGWA
Trigger: AGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 90 bp CCAGTGAGAGGCTGCATGCGGTCTGTCTCGGGAAAGCCCCTCTCCTaGCCTGCTCTAAGCGAGGATGAGCAGGTCAGGCTCATGATGAGC +
Preference number: 5 (lower is better)
Translates to: PVRGCMRSVSGKPLS*PALSEDEQVRLMMS
Trigger: GCTCATCATGAGCCTGACCTGCTCATCCTCGCTTAGAGCAGGGCAGGAGAGGGGCTTTCCCGAGACAGACCGCATGCAGCCTCTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 90 bp CCGGCAGGAGGCGCTCACTTGGACTCCCCTGTGCTGTTTGGACGATaGTTCCCATTCACGGAGCCCCACTTGTGCCAAGCACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: PAGGAHLDSPVLFGR*FPFTEPHLCQALWK
Trigger: CTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 90 bp CCCTTTTCGGCAAAGGTAACGGGTGGCTTCTTGGCAGCCCCCAGCTaGAGCCCTGCGTACGGCGACCTCTTGCCTTCCATAGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: PFSAKVTGGFLAAPS*SPAYGDLLPSIESM
Trigger: CATGGACTCTATGGAAGGCAAGAGGTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCCGAAAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CCA 90 bp GGGTTCAGGATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTGTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: GFRIGDLSGRRLGRE*GRQPRGLETHLSPH
Trigger: GTGTGGAGACAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529495.1
CDS CCA 90 bp ACTTCTGCAGCCACCGCCAGCCGCAGCTTCTCAGATGAGAGGGCATaGGAGACTGAACAGCAGAGTGTTCAACCCCGCCGTACCCCCTAC +
Preference number: 5 (lower is better)
Translates to: TSAATASRSFSDERA*ETEQQSVQPRRTPY
Trigger: GTAGGGGGTACGGCGGGGTTGAACACTCTGCTGTTCAGTCTCCCATGCCCTCTCATCTGAGAAGCTGCGGCTGGCGGTGGCTGCAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS-3UTR CAA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAGTAACGGGTGGCTTCTaGGCAGCCCCCAGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRVTGGF*AAPSWS
Trigger: GCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTAC...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGTCCGGACCCCACCTTaGGGTGTCAGGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHVRTPP*GVRYME
Trigger: CTCCATGTACCTGACACCCAAAGGTGGGGTCCGGAC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp ATGGAGTGTGGCCAGTGGGGAAGTCGGAGAGGCCGGAACTGCCCCCAAGAGGCTCATCTGCTGACAACATaGGGGGATAGGGCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: MECGQWGSRRGRNCPQEAHLLTT*GDRALE
Trigger: CTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATG...AGCCTCTTGGGGGCAGTTCCGGCCTCTCCGACTTCCCCACTGGCCACACTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CGGGTACTCACTGCTAGCCCCCAGATCCAGCCCGAGAGGAGGAGGCTGGCGGGTTCTCCTCTCCAATCCTaGAGCACCCTGATATGCAAC +
Preference number: 5 (lower is better)
Translates to: RVLTASPQIQPERRRLAGSPLQS*STLICN
Trigger: GTTGCATATCAGGGTGCTCAAGGATTGGAGAGGAGA...ACCCGCCAGCCTCCTCCTCTCGGGCTGGATCTGGGGGCTAGCAGTGAGTACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS GCA 90 bp GGCAAAGGTAACGGGTGGCTTCTTGGCAGCCCCCAGCTGGAGCCCTaGGTACGGCGACCTCTTGCCTTCCATAGAGTCCATGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: GKGNGWLLGSPQLEP*VRRPLAFHRVHAEV
Trigger: TACTTCAGCATGGACTCTATGGAAGGCAAGAGGTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS GCA 90 bp AAGCATCATCCAGCCCATTACCAAATGCAGCCGTCTGAACACGCGTaGAGCAGCCAGGGTGCCGCAACCGAAAATCCTGGGGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: KHHPAHYQMQPSEHA*SSQGAATENPGEAG
Trigger: GCCAGCCTCCCCAGGATTTTCGGTTGCGGCACCCTGGCTGCTGCACGCGTGTTCAGACGGCTGCATTTGGTAATGGGCTGGATGATGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 90 bp GGCAGATTTCCTGTCCCTCCTGTCCTCGGCACAGGCTACCCACAGTaGTTGGGCAGGGATGCCGGGGGAACCTGTTTCTTCCATCACAGA +
Preference number: 5 (lower is better)
Translates to: GRFPVPPVLGTGYPQ*LGRDAGGTCFFHHR
Trigger: TCTGTGATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGACAGGAAATCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS GCA 90 bp CCAGCCTTCTCACAGAGCCTGAAGCATAGGCATGGGCAGAGCGGGTaGCGGACCTCCAAATGGCTCTCCCTCTGCACTGTGGAATCACTC +
Preference number: 5 (lower is better)
Translates to: PAFSQSLKHRHGQSG*RTSKWLSLCTVESL
Trigger: GAGTGATTCCACAGTGCAGAGGGAGAGCCATTTGGAGGTCCGGCACCCGCTCTGCCCATGCCTATGCTTCAGGCTCTGTGAGAAGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 90 bp GGAAGAGCAGGGGTGTGGCGCCTCGTTCCTTCCGCCAGGAGCTCATaGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAA +
Preference number: 5 (lower is better)
Translates to: GRAGVWRLVPSARSS*GFVGPNPVAFVDVE
Trigger: TTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGAGCTCCTGGCGGAAGGAACGAGGCGCCACACCCCTGCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000524816.7
CDS CCA 90 bp GAGTTTCCCGGCAGGAGGCGCTCACTTGGACTCCCCTGTGCTGTTTaGACGATGCTTCCCATTCACGGAGCCCCACTTGTGCCAAGCACT +
Preference number: 5 (lower is better)
Translates to: EFPGRRRSLGLPCAV*TMLPIHGAPLVPST
Trigger: AGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCGGGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 90 bp GGGTTCAGGATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTAGAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: GFRIGDLSGRRLGRE*GRQPRGLETHLECG
Trigger: TCCACACTCTAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 90 bp GGGTTCAGGATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTTGCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GFRIGDLSGRRLGRE*GRQPRGLETHLASA
Trigger: AGCTGAAGCAAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532833.1
CDS-3UTR CAA 90 bp GCAGGCCCCAACCTATCTCACCCCTGTGATGGGTTGGCCTCTGAGCACAGGAATGTGGTCTTGGCATCCTaGCCGTCAGCCTTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: AGPNLSHPCDGLASEHRNVVLAS*PSALVP
Trigger: TGGCACCAAGGCTGACGGCAAGGATGCCAAGACCAC...ATTCCTGTGCTCAGAGGCCAACCCATCACAGGGGTGAGATAGGTTGGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp AGGGTGGGGGCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATGCGTACGGCGACCTCTaGCCTTCCATAGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: RVGAVCKAPFAVSPATLHAYGDL*PSIESM
Trigger: CATGGACTCTATGGAAGGCAAGAGGTCGCCGTACGC...ATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGCCCCCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp GGGCGGGAGAGGCAGGCTGATACCATGCGGGTACTCACTGCTAGCCCCCAGATCTTGGTGGTGAAGCTCTaGATGCGGTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRERQADTMRVLTASPQILVVKL*MRSFSF
Trigger: GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAA...GATCTGGGGGCTAGCAGTGAGTACCCGCATGGTATCAGCCTGCCTCTCCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGTGCTCCCGGGTCTGCTaGTCCTCATGCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARCSRVC*SSCSTL
Trigger: CAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCA...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp AGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGTCCGGACCCCACCTTaGGGTGTCAGGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: RCRSGRSGRRAPSSCHARVRTPP*GVRYME
Trigger: CTCCATGTACCTGACACCCAAAGGTGGGGTCCGGAC...CCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCCTGGGCCTTGGGGCTTaGGCTCCGCATGAGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPLGLGA*APHEGG
Trigger: CCCTCCCTCATGCGGAGCCAAAGCCCCAAGGCCCAG...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACGTCTGGGGCTGGGCCTaGGGGCTTTGGCTCCGCATG +
Preference number: 5 (lower is better)
Translates to: LTTLGDRALERNVYRPGDVWGWA*GLWLRM
Trigger: CATGCGGAGCCAAAGCCCCAAGGCCCAGCCCCAGAC...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGATAGGCCTGGGGCTGTaGAGACGGGAGATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALIGLGL*RREMSP
Trigger: TGGGGACATCTCCCGTCTCAACAGCCCCAGGCCTAT...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp CTGTACAGAGGCCGTGGCCAGCATTGTGACCTAGAAATGGGACAGTaGGCGGCCAGGAGCCTGAACAGTTTCTGCAAGGCTCACCCCACC +
Preference number: 5 (lower is better)
Translates to: LYRGRGQHCDLEMGQ*AARSLNSFCKAHPT
Trigger: GGTGGGGTGAGCCTTGCAGAAACTGTTCAGGCTCCTGGCCGCTCACTGTCCCATTTCTAGGTCACAATGCTGGCCACGGCCTCTGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 90 bp CAAGGTCCTGAAGTTCCAGAAGGAGTCCAGCCTTCTCACAGAGCCTaGAGCATAGGCATGGGCAGAGCGGGTGCCGGACCTCCAAATGGC +
Preference number: 5 (lower is better)
Translates to: QGPEVPEGVQPSHRA*SIGMGRAGAGPPNG
Trigger: GCCATTTGGAGGTCCGGCACCCGCTCTGCCCATGCCTATGCTTCAGGCTCTGTGAGAAGGCTGGACTCCTTCTGGAACTTCAGGACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS TCA 90 bp CCCTGTCCTGGGTATAGTATAGGACCCTGGGCCGGAAGGGACAACTaGGTGATGAGGCCTCAGAGACCACTGTTCAGGGGTCTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PCPGYSIGPWAGRDN*VMRPQRPLFRGLSA
Trigger: GGCAGAGAGACCCCTGAACAGTGGTCTCTGAGGCCTCATCACTCAGTTGTCCCTTCCGGCCCAGGGTCCTATACTATACCCAGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 90 bp GATTTCCTGTCCCTCCTGTCCTCGGCACAGGCTACCCACAGTGCTTaGGCAGGGATGCCGGGGGAACCTGTTTCTTCCATCACAGACATC +
Preference number: 5 (lower is better)
Translates to: DFLSLLSSAQATHSA*AGMPGEPVSSITDI
Trigger: GATGTCTGTGATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGACAGGAAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS-3UTR CAA 90 bp GGGCTGCAGGTTCTGCCATGCTGGGCATTGATAGGTAGGACGAGAGAGAGCACGTCCATCGCAGGGTGCTaGGCTGAGCTGTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: GLQVLPCWALIGRTRESTSIAGC*AELFQA
Trigger: AGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGGA...CGTGCTCTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAGAACCTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CGGGCAGGTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGTCCATCGCAGGGTGCTaGGCTGAGCTGTTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: RAGHCQSSECWRSTPRPGSIAGC*AELFQA
Trigger: AGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGGA...CCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTATGCCCGTTGGTGGTCTaGGCATCCTTGCCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WGFVGPNPVAFVDVEWPVCPLVV*ASLPSA
Trigger: GGCTGACGGCAAGGATGCCAAGACCACCAACGGGCA...TACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TGGGTGGCTGTGCTGTCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGTTGACCGCCTTCTGCTaGTTGCCGATGCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: WVAVLSRHLLTTLGDRALLTAFC*LPMQES
Trigger: CGACTCCTGCATCGGCAACAAGCAGAAGGCGGTCAA...CAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGACAGCACAGCCACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CACAGAGTCGCTGATGCTATGCAGCTGCTCCCGGGTCTGCTTGTCCTCATGCAGTTGACCGCCTTCTGCTaGTTGCCGATGCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: HRVADAMQLLPGLLVLMQLTAFC*LPMQES
Trigger: CGACTCCTGCATCGGCAACAAGCAGAAGGCGGTCAA...CTGCATGAGGACAAGCAGACCCGGGAGCAGCTGCATAGCATCAGCGACTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGCCCTCCAGGTGGGGCTaGAGATGCAGCTCGCAGAAG +
Preference number: 5 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPPSRWG*RCSSQK
Trigger: CTTCTGCGAGCTGCATCTCAAGCCCCACCTGGAGGG...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTGCCCGGCTCAGGTCCGCCTaGCACATCTTCTCAACGTGG +
Preference number: 5 (lower is better)
Translates to: LNAGGVLPDPGGVVTFGARLRSA*HIFSTW
Trigger: CCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCG...GGCACCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS TCA 90 bp AGTGACCACCAAGCATCATCCAGCCCATTACCAAATGCAGCCGTCTaGACACGCGTGCAGCAGCCAGGGTGCCGCAACCGAAAATCCTGG +
Preference number: 5 (lower is better)
Translates to: SDHQASSSPLPNAAV*TRVQQPGCRNRKSW
Trigger: CCAGGATTTTCGGTTGCGGCACCCTGGCTGCTGCACGCGTGTTCAGACGGCTGCATTTGGTAATGGGCTGGATGATGCTTGGTGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 90 bp GGACGATGCTTCCCATTCACGGAGCCCCACTTGTGCCAAGCACTGTaGAAGGGACTTTGTAGATGTCTCCTCACTGAGCCTGGCCCCGTA +
Preference number: 5 (lower is better)
Translates to: GRCFPFTEPHLCQAL*KGLCRCLLTEPGPV
Trigger: TACGGGGCCAGGCTCAGTGAGGAGACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATTCCCCGCCGTGCCCGTaGGTGGTCTTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYSPPCP*VVLASL
Trigger: CAAGGATGCCAAGACCACCAACGGGCACGGCGGGGA...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp GTGAGACTCAAGGGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTGTCCGGACCCCACCTTaGGGTGTCAGGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: VRLKGTLPLALSLRELTPVRTPP*GVRYME
Trigger: CTCCATGTACCTGACACCCAAAGGTGGGGTCCGGAC...AGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTTGAGTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CAA 90 bp ACACCTCCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGAGTCAGCTCCTTGCCTTaGTGTGGTCCACAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TPPGQLLAFVWSTAGLEGVSSLP*CGPQQD
Trigger: GTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGAC...TCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGGAGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CAA 90 bp GGTACACTGCCTTTGGCCCTGTCTCTCAGGGAACTGACACCTCCTGGTCAGCTCAAGGGTACACTGCCTTaGGCCCTGTCTCTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: GTLPLALSLRELTPPGQLKGTLP*ALSLRE
Trigger: TTCCCTGAGAGACAGGGCCAAAGGCAGTGTACCCTT...GAGCTGACCAGGAGGTGTCAGTTCCCTGAGAGACAGGGCCAAAGGCAGTGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS TCA 90 bp GTTGCTCCTGGAGGCATCTGCAGCTTCCATCGCAGGGTGCTTGGCTaGGCTGTTTCAGGCTTGCTGGGGTTCAGGATAGGTGACCTTTCT +
Preference number: 5 (lower is better)
Translates to: VAPGGICSFHRRVLG*AVSGLLGFRIGDLS
Trigger: AGAAAGGTCACCTATCCTGAACCCCAGCAAGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGGAAGCTGCAGATGCCTCCAGGAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS GCA 90 bp AGGAGCTGCCTTGGACGACGGGCAGGTCATTGTCAGAGTTCTGAATaGTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACATGGCA +
Preference number: 5 (lower is better)
Translates to: RSCLGRRAGHCQSSE*WRSTPRPGRCSYMA
Trigger: TGCCATGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524664.5
CDS GCA 90 bp TGTCTCCTCACTGAGCCTGGCCCCGTATCTATGAGCTCAGCAGTCTaGCTGAGTTGCACAGCTCATAAGCAGCAAACCAGGTGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: CLLTEPGPVSMSSAV*LSCTAHKQQTRCWG
Trigger: TCCCCAGCACCTGGTTTGCTGCTTATGAGCTGTGCAACTCAGGCAGACTGCTGAGCTCATAGATACGGGGCCAGGCTCAGTGAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 90 bp AGCTGCCTTGGACGACGGGCAGGTCATTGTCAGAGTTCTGAATGCTaGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACATGGCACCT +
Preference number: 5 (lower is better)
Translates to: SCLGRRAGHCQSSEC*RSTPRPGRCSYMAP
Trigger: AGGTGCCATGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGACCTGCCCGTCGTCCAAGGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524664.5
CDS CCA 90 bp ATGACCTGGATGCTGAGGCCCTCAAGAAATAAGCAGGGTCTGTCCTaGGCCAGATCTCTGTCCAGTGAGAGGCTGCATGCGGTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: MTWMLRPSRNKQGLS*ARSLSSERLHAVCL
Trigger: GAGACAGACCGCATGCAGCCTCTCACTGGACAGAGATCTGGCCCAGGACAGACCCTGCTTATTTCTTGAGGGCCTCAGCATCCAGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS-3UTR CAA 90 bp GTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTATCCTTGCCGTCAGCCTaGGTGCCATTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VIVRVLNAGGVLPDPGGVSLPSA*VPFSRL
Trigger: CAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGA...TACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp GATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGTTGAGCAGGTCGTCCTaGAAGTTGCCTAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: DAGLVGLAEELHRLAMHGLSRSS*KLPSDC
Trigger: ACAGTCACTAGGCAACTTCAAGGACGACCTGCTCAA...CCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp GTCATTGTCAGAGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGAAGGAGGAGCTGCCTaGGACGACGGGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: VIVRVLNAGGVLPDPGGVEGGAA*DDGQVI
Trigger: AATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTC...TACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACTCTGACAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp GATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGGACAGCATAGTCTGCTaGCCAGATTTCCAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: DAGLVGLAEELHRLAMHGDSIVC*PDFQVW
Trigger: CCAGACTTGGAAATCTGGCAAGCAGACTATGCTGTC...CCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp GCAGTGTGTAAGGCACCTTTTGCGGTCAGCCCAGCCACACTCCATCGCCAGAGAGTGCTGCTCCTGGTTTaGTCTCCTCTCCAATCCTTG +
Preference number: 5 (lower is better)
Translates to: AVCKAPFAVSPATLHRQRVLLLV*SPLQSL
Trigger: CAAGGATTGGAGAGGAGACAAAACCAGGAGCAGCAC...TCTCTGGCGATGGAGTGTGGCTGGGCTGACCGCAAAAGGTGCCTTACACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CCA 90 bp GGGTTCAGGATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTGATTTTTAAA +
Preference number: 5 (lower is better)
Translates to: GFRIGDLSGRRLGRE*GRQPRGLETHLIFK
Trigger: TTTAAAAATCAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529011.1
CDS CCA 90 bp CCAGTCTCTGAGTTTGATGGACAACCCACAGAGAGGAGGCATTTGTaGAGCCAGTGCCCAGGATGTCCCTGCTCTGGAGGTCTCTTCCTA +
Preference number: 5 (lower is better)
Translates to: PVSEFDGQPTERRHL*SQCPGCPCSGGLFL
Trigger: TAGGAAGAGACCTCCAGAGCAGGGACATCCTGGGCACTGGCTCCACAAATGCCTCCTCTCTGTGGGTTGTCCATCAAACTCAGAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS-3UTR CAA 90 bp CAGCCCAGCCACACTCCATCGCCAGAGAGAATGCCAAAGTGTAGACTGAATGAATCCTTGCCGTCAGCCTaGGTGCCATTCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QPSHTPSPERMPKCRLNESLPSA*VPFSRL
Trigger: CAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGA...TTCATTCAGTCTACACTTTGGCATTCTCTCTGGCGATGGAGTGTGGCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CTTTGGGTGTCAGGTACATGGAGTATCTCTTCATGGTGTCCGGTGCACTCCACTACCGCCTTCTGCTTGTaGCCGATGCAGGAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LWVSGTWSISSWCPVHSTTAFCL*PMQESH
Trigger: GTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGGT...AGTGGAGTGCACCGGACACCATGAAGAGATACTCCATGTACCTGACACCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGAAGAGCTCCATCGTCTaGCCATGCACGGGACACTTG +
Preference number: 5 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPKSSIV*PCTGHL
Trigger: CAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTT...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp GAGTATCTCTTCATGGTGTCCGGTGCACTCCACTCACCCCCGAAGCTGTTCGTGTTGGTGGTGAAGCTCTaGATGCGGTCCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EYLFMVSGALHSPPKLFVLVVKL*MRSFSF
Trigger: GAAGGAGAAGGACCGCATCAAGAGCTTCACCACCAA...CACGAACAGCTTCGGGGGTGAGTGGAGTGCACCGGACACCATGAAGAGATACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATTGCTCCCGGGTCTGCTaGTCCTCATGCAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYCSRVC*SSCSTL
Trigger: CAAGGTGCTGCATGAGGACAAGCAGACCCGGGAGCA...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TCATGGGGCTTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGAGGTCGTCCTTGAAGTaGCCTAGTGACTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SWGFVGPNPVAFVDVEWPRSSLK*PSDCPR
Trigger: CCTGGGACAGTCACTAGGCAACTTCAAGGACGACCT...CGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAAGCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATCGGCTCAGGTCCGCCTaGCACATCTTCTCAACGTGG +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYRLRSA*HIFSTW
Trigger: CCACGTTGAGAAGATGTGCAAGGCGGACCTGAGCCG...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATGAAGGAGGAGCTGCCTaGGACGACGGGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYEGGAA*DDGQVI
Trigger: AATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTC...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGAGAAGGAGGAGCTGCCTaGGACGACGGGCAGGTCATT +
Preference number: 5 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVREGGAA*DDGQVI
Trigger: AATGACCTGCCCGTCGTCCAAGGCAGCTCCTCCTTC...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000531555.5
CDS GCA 90 bp CCTCCACCCAGCAAGAGCAGGAGGGAAACTCATTTACAGGGTGCTTaGCCTTTTCAGTGGACCTGGGGACAATGGGAAGAGAAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: PPPSKSRRETHLQGA*PFQWTWGQWEEKGR
Trigger: CCTTCCTTTCTCTTCCCATTGTCCCCAGGTCCACTGAAAAGGGCAAGCACCCTGTAAATGAGTTTCCCTCCTGCTCTTGCTGGGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529044.5
ENST00000532195.1
CDS GCA 90 bp CCTGTGCTGTTTGGACGATGCTTCCCATTCACGGAGCCCCACTTGTaGCAAGCACTGTGGAAGGGACTTTGTAGATGTCTCCTCACTGAG +
Preference number: 5 (lower is better)
Translates to: PVLFGRCFPFTEPHL*QALWKGLCRCLLTE
Trigger: CTCAGTGAGGAGACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 90 bp CCACAGGACCCTAGAGCCAGCCAACGCTGGGAGTTAAATAAACTCTaGAGTAGGAGAAGCAGCATCCTGAGGATCAGAGAGGTCGAGTGC +
Preference number: 5 (lower is better)
Translates to: PQDPRASQRWELNKL*SRRSSILRIREVEC
Trigger: GCACTCGACCTCTCTGATCCTCAGGATGCTGCTTCTCCTACTGCAGAGTTTATTTAACTCCCAGCGTTGGCTGGCTCTAGGGTCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 90 bp TGCAGTTCTAGGTCACGTCTGCTAGAGTCTGCAAAGCCACCAGTTTaGAATCTGGCCCATACTAGTGGCAGCATCCACACAGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CSSRSRLLESAKPPV*NLAHTSGSIHTAAG
Trigger: CCCAGCAGCTGTGTGGATGCTGCCACTAGTATGGGCCAGATTCCAAACTGGTGGCTTTGCAGACTCTAGCAGACGTGACCTAGAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 90 bp GGAGGGATAGCCGGGATTATTTTTAGACAGCCCACTGCGACCCAGTaGTTTGGAAAACTCTGCAGTGGCCTGTCCCAAGGTGGTGAACTG +
Preference number: 5 (lower is better)
Translates to: GGIAGIIFRQPTATQ*FGKLCSGLSQGGEL
Trigger: CAGTTCACCACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCTAAAAATAATCCCGGCTATCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530919.5
ENST00000533302.5
CDS-3UTR CAA 90 bp AGACTCAAAGTGGCTGTGGTGGAGACCCACCGCCTGGGTAGGGTGATGTCAAGAAGGATGGCCTTCTCATaGGTGGTGAAGCTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RLKVAVVETHRLGRVMSRRMAFS*VVKLLM
Trigger: CATCAAGAGCTTCACCACCAATGAGAAGGCCATCCT...TCTTGACATCACCCTACCCAGGCGGTGGGTCTCCACCACAGCCACTTTGAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCTCCTCATGCAGCACCTaGGCTCTCTCATCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPSSCST*ALSSRA
Trigger: TGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGA...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp AGTTCTGAATGCTGGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACCTTTGGTCCTCATGCAGCACCTaGGCTCTCTCATCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SSECWRSTPRPGRCSYLWSSCST*ALSSRA
Trigger: TGCTCTGGATGAGAGAGCCAAGGTGCTGCATGAGGA...CCAAAGGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCCAGCATTCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACCTGCCATGCTGGGCATaGATAGGTAGGACGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LTTLGDRALERNVYRPGDLPCWA*IGRTRE
Trigger: CTCTCTCGTCCTACCTATCAATGCCCAGCATGGCAG...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp ACACCTCCTGGTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTGAGGGAACCAGCATAGTCTGCTaGCCAGATTTCCAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: TPPGQLLAFVWSTAGLEGTSIVC*PDFQVW
Trigger: CCAGACTTGGAAATCTGGCAAGCAGACTATGCTGGT...TCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGACCAGGAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS-3UTR CAA 90 bp TTCGTTGGACCCAATCCCGTTGCCTTTGTTGACGTAGAATGGCCGGTAGTGAGACTCCTGGTCAGCTCCTaGCCTTTGTGTGGTCCACAG +
Preference number: 5 (lower is better)
Translates to: FVGPNPVAFVDVEWPVVRLLVSS*PLCGPQ
Trigger: CTGTGGACCACACAAAGGCAAGGAGCTGACCAGGAG...TCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS GCA 90 bp ATCTCCTCCACCCAGCAAGAGCAGGAGGGAAACTCATTTACAGGGTaGTTGCCCTTTTCAGTGGACCTGGGGACAATGGGAAGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: ISSTQQEQEGNSFTG*LPFSVDLGTMGRER
Trigger: CCTTTCTCTTCCCATTGTCCCCAGGTCCACTGAAAAGGGCAAGCACCCTGTAAATGAGTTTCCCTCCTGCTCTTGCTGGGTGGAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529044.5
ENST00000532195.1
CDS GCA 90 bp ATGATCTTGAGCTGCAGCTGCTCCTTTTGCAATGACAGCTCCGTCTaGAGAGAAAGAGCCAGGATTGGAGAAGTCAGGGGGAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: MILSCSCSFCNDSSV*RERARIGEVRGRRW
Trigger: CCATCTCCTCCCCCTGACTTCTCCAATCCTGGCTCTTTCTCTGCAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532195.1
CDS CCA 90 bp TGGGCAGATACCGGGATTATTTTTAGACAGCCCACTGCGACCCAGTaGTTTGGAAAACTCTGCAGTGGCCTGTCCCAAGGTGGTGAACTG +
Preference number: 5 (lower is better)
Translates to: WADTGIIFRQPTATQ*FGKLCSGLSQGGEL
Trigger: CAGTTCACCACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCTAAAAATAATCCCGGTATCTGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTGCCCGTTGGTGGTCTaGGCATCCTTGCCGTCAGCC +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWICPLVV*ASLPSA
Trigger: GGCTGACGGCAAGGATGCCAAGACCACCAACGGGCA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATTCCGAGAAAATGGACTaGCGCAGCTCGCCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYSEKMD*RSSPFS
Trigger: CGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGGA...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCTCCGAGAAAATGGACTaGCGCAGCTCGCCCTTTTCG +
Preference number: 5 (lower is better)
Translates to: SLIQSIHDHLHLVHSILLSEKMD*RSSPFS
Trigger: CGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGGA...GAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp TCCAGGCATCTGCTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAAGAGCTCCATCGTCTaGCCATGCACGGGACACTTG +
Preference number: 5 (lower is better)
Translates to: SRHLLTTLGDRALERNVYKSSIV*PCTGHL
Trigger: CAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTT...ATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAGCAGATGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CTGGAACATGCAAAGGTAGCAGATGCAGGTCTGGTCGGTCTGGCAGAAGAGCTCAGGATGGCCTTCTCATaGGTGGTGAAGCTCTTGATG +
Preference number: 5 (lower is better)
Translates to: LEHAKVADAGLVGLAEELRMAFS*VVKLLM
Trigger: CATCAAGAGCTTCACCACCAATGAGAAGGCCATCCT...GAGCTCTTCTGCCAGACCGACCAGACCTGCATCTGCTACCTTTGCATGTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACTGGCGCATGCATACATaGAGCAGGTCGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LTTLGDRALERNVYRPGDWRMHT*SRSSLK
Trigger: CTTCAAGGACGACCTGCTCAATGTATGCATGCGCCA...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp ATCCTCAATCTCAATGATCTTGAGCTGCAGCTGCTCCTTTTGCAATaGCAGCTCCGTCTCGGATATGCCAGGCACCATGCCAGTCGCCAA +
Preference number: 5 (lower is better)
Translates to: ILNLNDLELQLLLLQ*QLRLGYARHHASRQ
Trigger: TTGGCGACTGGCATGGTGCCTGGCATATCCGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529044.5
CDS GCA 90 bp GCTTCATCCTCAATCTCAATGATCTTGAGCTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTCGGATATGCCAGGCACCATGCCAGTC +
Preference number: 5 (lower is better)
Translates to: ASSSISMILSCSCSF*NDSSVSDMPGTMPV
Trigger: GACTGGCATGGTGCCTGGCATATCCGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGATGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529044.5
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTACCGCCTTCTGCTTGTaGCCGATGCAGGAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWITAFCL*PMQESH
Trigger: GTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGGT...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TCTCTCATCCAGAGCATCCATGATCACCTTCACTTGGTCCACAGCATCCTGCTCTGGCGCATGCATACATaGAGCAGGTCGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SLIQSIHDHLHLVHSILLWRMHT*SRSSLK
Trigger: CTTCAAGGACGACCTGCTCAATGTATGCATGCGCCA...GAGCAGGATGCTGTGGACCAAGTGAAGGTGATCATGGATGCTCTGGATGAGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475051.4
CDS-3UTR CAA 90 bp CTGACAACATTGGGGGATAGGGCCTTGGAGAGAAACGTCTATAGGCCTGGAGACGACAGCATAGTCTGCTaGCCAGATTTCCAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: LTTLGDRALERNVYRPGDDSIVC*PDFQVW
Trigger: CCAGACTTGGAAATCTGGCAAGCAGACTATGCTGTC...GTCTCCAGGCCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAATGTTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp GAGGTTTTCTGTGAGATGATTCAGTTGACCTCTGAGGGGACAGCATaGCTCAGAAGAAGAGCTGACTTCAAGGGAGCTGGTGAGTCACAG +
Preference number: 5 (lower is better)
Translates to: EVFCEMIQLTSEGTA*LRRRADFKGAGESQ
Trigger: CTGTGACTCACCAGCTCCCTTGAAGTCAGCTCTTCTTCTGAGTCATGCTGTCCCCTCAGAGGTCAACTGAATCATCTCACAGAAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTAGGTCGTCCTTGAAGTaGCCTAGTGACTGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIRSSLK*PSDCPR
Trigger: CCTGGGACAGTCACTAGGCAACTTCAAGGACGACCT...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp CAGACCAATGGTTTATTCCAAAGGGGAAAGCCCAAGCTGGATGTCTCCCTCCCCTGGGCCAGTAGCTATTaGCATGGGTGGATTATATCA +
Preference number: 5 (lower is better)
Translates to: QTNGLFQRGKPKLDVSLPWASSY*HGWIIS
Trigger: TGATATAATCCACCCATGCAAATAGCTACTGGCCCA...GGGGAGGGAGACATCCAGCTTGGGCTTTCCCCTTTGGAATAAACCATTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp AGTGCCCAGGCTTCAGGCCCTAAAGGGACTGGGTGGAAAAGGACTTaGCGATGTTGTTTCTCAGGTTCAGAGGTTTTCTGTGAGATGATT +
Preference number: 5 (lower is better)
Translates to: SAQASGPKGTGWKRT*RCCFSGSEVFCEMI
Trigger: AATCATCTCACAGAAAACCTCTGAACCTGAGAAACAACATCGTCAAGTCCTTTTCCACCCAGTCCCTTTAGGGCCTGAAGCCTGGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 90 bp GACGAGGGCTGGTATGATGTCCGGACCCCACCTGGATTCCACCACTaGGAGAAGTCCTTTGGGTCTGACATAAGTCAATCAACTAATTTA +
Preference number: 5 (lower is better)
Translates to: DEGWYDVRTPPGFHH*EKSFGSDISQSTNL
Trigger: TAAATTAGTTGATTGACTTATGTCAGACCCAAAGGACTTCTCTCAGTGGTGGAATCCAGGTGGGGTCCGGACATCATACCAGCCCTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526881.1
CDS GCA 90 bp GCTTCATCCTCAATCTCAATGATCTTGAGCTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTGCAGAGAAAGAGCCAGGATTGGAGAA +
Preference number: 5 (lower is better)
Translates to: ASSSISMILSCSCSF*NDSSVCRERARIGE
Trigger: TTCTCCAATCCTGGCTCTTTCTCTGCAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532195.1
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTTGGGGGATAGGGCCTaGGAGAGAAACGTCTATAGG +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWILGDRA*ERNVYR
Trigger: CCTATAGACGTTTCTCTCCAAGGCCCTATCCCCCAA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTTTGAGCAGGTCGTCCTaGAAGTTGCCTAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWILSRSS*KLPSDC
Trigger: ACAGTCACTAGGCAACTTCAAGGACGACCTGCTCAA...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS-3UTR CAA 90 bp TGTAGGCAAATGGTAAATGGTAGCTGGGCCAGTAGCTATTTGCATGGGTGGATTGAACAGAGGAATATCTaGGCTAAGGTCATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: CRQMVNGSWASSYLHGWIEQRNI*AKVILP
Trigger: TGGCAGGATGACCTTAGCCAAGATATTCCTCTGTTC...AATCCACCCATGCAAATAGCTACTGGCCCAGCTACCATTTACCATTTGCCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 90 bp GCAAGCCCCACTCTTCCTCACTGGATGTTTGTTTCTTCTGTAACATaGAAAGGTTCAACTAAAAGCCACTGGATGCTAACATCCCTGATG +
Preference number: 5 (lower is better)
Translates to: ASPTLPHWMFVSSVT*KGSTKSHWMLTSLM
Trigger: CATCAGGGATGTTAGCATCCAGTGGCTTTTAGTTGAACCTTTTCATGTTACAGAAGAAACAAACATCCAGTGAGGAAGAGTGGGGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530470.1
CDS TCA 90 bp AGCCAAATGATTGTCTTGCTGAAATGGCTTATCTGTCCTTGTGTGTaGTTGAATGTCCCCCACATTTCACAGGGACACCATGTGATATTG +
Preference number: 5 (lower is better)
Translates to: SQMIVLLKWLICPCV*LNVPHISQGHHVIL
Trigger: CAATATCACATGGTGTCCCTGTGAAATGTGGGGGACATTCAATCACACACAAGGACAGATAAGCCATTTCAGCAAGACAATCATTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 90 bp TCACTATTGTCATTAGAAGGAGGATTTCGGGATCTGAGTGCCGTTTaGAGCCAAATGATTGTCTTGCTGAAATGGCTTATCTGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: SLLSLEGGFRDLSAV*SQMIVLLKWLICPC
Trigger: ACAAGGACAGATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGACAATAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 90 bp AGCATCATCACTATTGTCATTAGAAGGAGGATTTCGGGATCTGAGTaGCGTTTGAAGCCAAATGATTGTCTTGCTGAAATGGCTTATCTG +
Preference number: 5 (lower is better)
Translates to: SIITIVIRRRISGSE*RLKPNDCLAEMAYL
Trigger: CAGATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGACAATAGTGATGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp GGCTGCCACTGGGGCCCGACGGGCTCCGGGCATCCCTaGCTTCTGGGCTCGACCCGTTGCTCCTGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: GCHWGPTGSGHP*LLGSTRCSWRH
Trigger: ATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGTGGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp ACTGGGGCCCGACGGGCTCCGGGCATCCCTGGCTTCTaGGCTCGACCCGTTGCTCCTGGAGGCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: TGARRAPGIPGF*ARPVAPGGICS
Trigger: GCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp TTGCGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGCTaGTGGTCTCGGAAGGCGGCGCCCTCCAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: LRASKSRMGSSS*WSRKAAPSRWG
Trigger: GCCCCACCTGGAGGGCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS CAA 90 bp CCCTCAGCTGCCTCCCCGCCGTGCCCGTTGGTGGTCTTGGCATCCTaGCCGTCAGCCTTGGTGCCATTCTCCAGGCTGCCACTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: PSAASPPCPLVVLAS*PSALVPFSRLPLGP
Trigger: GGGCCCCAGTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGCTGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp TGCCGTCAGCCTTGGTGCCATTCTCCAGGCTGCCACTaGGGCCCGACGGGCTCCGGGCATCCCTGGCTTCTG +
Preference number: 6 (lower is better)
Translates to: CRQPWCHSPGCH*GPTGSGHPWLL
Trigger: CAGAAGCCAGGGATGCCCGGAGCCCGTCGGGCCCCAGTGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp GGCTCTTGCCCTCAGCTGCCTCCCCGCCGTGCCCGTTaGTGGTCTTGGCATCCTTGCCGTCAGCCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: GSCPQLPPRRAR*WSWHPCRQPWC
Trigger: GCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGCTGAGGGCAAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp CTCATTGCCCGCGAACAGGGCGCTCCTACCTTCCCCTaGCTTCAGGGCGCTGCCCAGGCTCTTGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LIAREQGAPTFP*LQGAAQALALS
Trigger: GCTGAGGGCAAGAGCCTGGGCAGCGCCCTGAAGCCAGGGGAAGGTAGGAGCGCCCTGTTCGCGGGCAATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341846.10
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
CDS CCA 72 bp CATGCACGGGACACTTGCGGGCCTCAAAGTCCCGGATaGGCTCGAGCAGCTGGTGGTCTCGGAAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: HARDTCGPQSPG*ARAAGGLGRRR
Trigger: GCGCCGCCTTCCGAGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS CCA 72 bp ACTCTCAAGGCCCCGTGCAACGCCTGGGACACCGGGTaGGGCCTTGGGGAAAGTGCCCAGGCTTCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: TLKAPCNAWDTG*GLGESAQASGP
Trigger: AGGGCCTGAAGCCTGGGCACTTTCCCCAAGGCCCCACCCGGTGTCCCAGGCGTTGCACGGGGCCTTGAGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp CCTGCCCAAGATGCCCCAGGCCCTAGGCCCTCGGGGTaGCATCATAGTGGGTGCTGCTGTTCCCTCCACCCC +
Preference number: 6 (lower is better)
Translates to: PAQDAPGPRPSG*HHSGCCCSLHP
Trigger: GGGGTGGAGGGAACAGCAGCACCCACTATGATGCCACCCCGAGGGCCTAGGGCCTGGGGCATCTTGGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS TCA 72 bp GGGGGTAGCTGTTCCGCCGGGTCTCCCCGGGCTCCATaGTGGACACCGTGGGCTTCCGGGACTCCGAGAAAA +
Preference number: 6 (lower is better)
Translates to: GGSCSAGSPRAP*WTPWASGTPRK
Trigger: TTTTCTCGGAGTCCCGGAAGCCCACGGTGTCCATCATGGAGCCCGGGGAGACCCGGCGGAACAGCTACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS GCA 72 bp GGCTCCGGGCATCCCTGGCTTCTGGGCTCGACCCGTTaGTCCTGGAGGCATCTGCAGCTTCCATCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: GSGHPWLLGSTR*SWRHLQLPSQG
Trigger: ACCCTGCGATGGAAGCTGCAGATGCCTCCAGGAGCAACGGGTCGAGCCCAGAAGCCAGGGATGCCCGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS CCA 72 bp GCAAGAGCAGCAGGGTCAGGAGGAAGAGCAGGGGTGTaGCGCCTCGTTCCTTCCGCCAGGAGCTCATGGGGC +
Preference number: 6 (lower is better)
Translates to: ARAAGSGGRAGV*RLVPSARSSWG
Trigger: GCCCCATGAGCTCCTGGCGGAAGGAACGAGGCGCCACACCCCTGCTCTTCCTCCTGACCCTGCTGCTCTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000524816.7
CDS CAA 72 bp GCCTCCCCGCCGTGCCCGTTGGTGGTCTTGGCATCCTaGCCGTCAGCCTTGGTGCCATTCTCCAGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: ASPPCPLVVLAS*PSALVPFSRLP
Trigger: TGGCAGCCTGGAGAATGGCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CAA 90 bp TCGTCCCCGGACTCGACAAACTGGATGATGGGTCGCCGCCACTCATaGCCCGCGAACAGGGCGCTCCTACCTTCCCCTGGCTTCAGGGCG +
Preference number: 6 (lower is better)
Translates to: SSPDSTNWMMGRRHS*PANRALLPSPGFRA
Trigger: CGCCCTGAAGCCAGGGGAAGGTAGGAGCGCCCTGTTCGCGGGCAATGAGTGGCGGCGACCCATCATCCAGTTTGTCGAGTCCGGGGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341846.10
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
CDS TCA 72 bp GTCGCACAGCACCTCCTCGGAGCCGGACTTGGACCGTaGAAAAAGGCCCGTGTCGGCCCGGGGGTAGCTGTT +
Preference number: 6 (lower is better)
Translates to: VAQHLLGAGLGP*KKARVGPGVAV
Trigger: AACAGCTACCCCCGGGCCGACACGGGCCTTTTTTCACGGTCCAAGTCCGGCTCCGAGGAGGTGCTGTGCGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS GCA 72 bp CCCAGGCCTGGCCGGACCTCACCGGAGGGGCTGCCCTaGCGAGTTTGTACCCCAGGGACGATGATTATCACA +
Preference number: 6 (lower is better)
Translates to: PRPGRTSPEGLP*RVCTPGTMIIT
Trigger: TGTGATAATCATCGTCCCTGGGGTACAAACTCGGCAGGGCAGCCCCTCCGGTGAGGTCCGGCCAGGCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp CCTCAGCTGCCTCCCCGCCGTGCCCGTTGGTGGTCTTaGCATCCTTGCCGTCAGCCTTGGTGCCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: PQLPPRRARWWS*HPCRQPWCHSP
Trigger: TGGAGAATGGCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp TCTTGCCCTCAGCTGCCTCCCCGCCGTGCCCGTTGGTaGTCTTGGCATCCTTGCCGTCAGCCTTGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: SCPQLPPRRARW*SWHPCRQPWCH
Trigger: ATGGCACCAAGGCTGACGGCAAGGATGCCAAGACCACCAACGGGCACGGCGGGGAGGCAGCTGAGGGCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
ENST00000627238.1
CDS CCA 72 bp CCCTGGTCTGGTGGGCAGGCTAGCATCGGGGAGGAGTaGATGGTCACTCCACTGTCTGACTCACCGGCCACC +
Preference number: 6 (lower is better)
Translates to: PWSGGQASIGEE*MVTPLSDSPAT
Trigger: GGTGGCCGGTGAGTCAGACAGTGGAGTGACCATCCACTCCTCCCCGATGCTAGCCTGCCCACCAGACCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp TTAGCGCAGGGGCCTTTGAGGGTGTGGACGAGTCCCTaGTCTGGTGGGCAGGCTAGCATCGGGGAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: LAQGPLRVWTSP*SGGQASIGEEW
Trigger: CCACTCCTCCCCGATGCTAGCCTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp AGCTCGCCCTTTTCGGCAAAGGTAACGGGTGGCTTCTaGGCAGCCCCCAGCTGGAGCCCTGCGTACGGCGAC +
Preference number: 6 (lower is better)
Translates to: SSPFSAKVTGGF*AAPSWSPAYGD
Trigger: GTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCCGAAAAGGGCGAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CAA 90 bp GACTTGCGCAGCTCGCCCTTTTCGGCAAAGGTAACGGGTGGCTTCTaGGCAGCCCCCAGCTGGAGCCCTGCGTACGGCGACCTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: DLRSSPFSAKVTGGF*AAPSWSPAYGDLLP
Trigger: AGGCAAGAGGTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCCGAAAAGGGCGAGCTGCGCAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS TCA 72 bp CTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTGGTATaGTGTCCGGACCCCACCCAAAGGCACAGCACCCCA +
Preference number: 6 (lower is better)
Translates to: LLGEAARRRGLV*CPDPTQRHSTP
Trigger: TGGGGTGCTGTGCCTTTGGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524956.4
CDS GCA 72 bp GAGGCCTGGCACACCAGGCAGGACTTGACCGCCTTCTaGTTGTTGCCGATGCAGGAGTCGCACAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: EAWHTRQDLTAF*LLPMQESHSTS
Trigger: GGAGGTGCTGTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGGTCAAGTCCTGCCTGGTGTGCCAGGCCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS GCA 72 bp GGCTGCATGCGGTCTGTCTCGGGAAAGCCCCTCTCCTaGCCTGCTCTAAGCGAGGATGAGCAGGTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: GCMRSVSGKPLS*PALSEDEQVRL
Trigger: GAGCCTGACCTGCTCATCCTCGCTTAGAGCAGGGCAGGAGAGGGGCTTTCCCGAGACAGACCGCATGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp GGGAGTGTTGCCCCCACATCCAGCGCAGCATCACACTaGTCTGCAGGGATTTCCACTCACCCACCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: GSVAPTSSAASH*SAGISTHPPRR
Trigger: CCTCCGGGGTGGGTGAGTGGAAATCCCTGCAGAGCAGTGTGATGCTGCGCTGGATGTGGGGGCAACACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp CCTGTCCCTCCTGTCCTCGGCACAGGCTACCCACAGTaGTTGGGCAGGGATGCCGGGGGAACCTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: PVPPVLGTGYPQ*LGRDAGGTCFF
Trigger: GAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS GCA 72 bp TCCCAAAGGGGCGCCTGCAGGATTGGATCTGCAGGATaGTGGCAGGTGCCCCATGGCCACAGGACCCTAGAG +
Preference number: 6 (lower is better)
Translates to: SQRGACRIGSAG*WQVPHGHRTLE
Trigger: CTCTAGGGTCCTGTGGCCATGGGGCACCTGCCAGCATCCTGCAGATCCAATCCTGCAGGCGCCCCTTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 72 bp CTTGCGCAGCTCGCCCTTTTCGGCAAAGGTAACGGGTaGCTTCTTGGCAGCCCCCAGCTGGAGCCCTGCGTA +
Preference number: 6 (lower is better)
Translates to: LAQLALFGKGNG*LLGSPQLEPCV
Trigger: TACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGCCGAAAAGGGCGAGCTGCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CCA 72 bp GGTCTGGTGGGCAGGCTAGCATCGGGGAGGAGTGGATaGTCACTCCACTGTCTGACTCACCGGCCACCACCT +
Preference number: 6 (lower is better)
Translates to: GLVGRLASGRSG*SLHCLTHRPPP
Trigger: AGGTGGTGGCCGGTGAGTCAGACAGTGGAGTGACCATCCACTCCTCCCCGATGCTAGCCTGCCCACCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp GCCTGGTGTCTCTTAGCGCAGGGGCCTTTGAGGGTGTaGACGAGTCCCTGGTCTGGTGGGCAGGCTAGCATC +
Preference number: 6 (lower is better)
Translates to: AWCLLAQGPLRV*TSPWSGGQASI
Trigger: GATGCTAGCCTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp CCTCTGCACTGTGGAATCACTCCCGCAGGAGGCAGGTaGTGGGAGAAGGCCTTGGCCTCAGCATTCCCCTGC +
Preference number: 6 (lower is better)
Translates to: PLHCGITPAGGR*WEKALASAFPC
Trigger: GCAGGGGAATGCTGAGGCCAAGGCCTTCTCCCACCACCTGCCTCCTGCGGGAGTGATTCCACAGTGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 72 bp CAAAGGGGCGCCTGCAGGATTGGATCTGCAGGATGCTaGCAGGTGCCCCATGGCCACAGGACCCTAGAGCCA +
Preference number: 6 (lower is better)
Translates to: QRGACRIGSAGC*QVPHGHRTLEP
Trigger: TGGCTCTAGGGTCCTGTGGCCATGGGGCACCTGCCAGCATCCTGCAGATCCAATCCTGCAGGCGCCCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CAA 72 bp GACTCGACAAACTGGATGATGGGTCGCCGCCACTCATaGCCCGCGAACAGGGCGCTCCTACCTTCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: DSTNWMMGRRHS*PANRALLPSPG
Trigger: GCCAGGGGAAGGTAGGAGCGCCCTGTTCGCGGGCAATGAGTGGCGGCGACCCATCATCCAGTTTGTCGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341846.10
ENST00000529011.1
ENST00000529495.1
ENST00000532833.1
CDS CAA 72 bp GCCTGGCACACCAGGCAGGACTTGACCGCCTTCTGCTaGTTGCCGATGCAGGAGTCGCACAGCACCTCCTCG +
Preference number: 6 (lower is better)
Translates to: AWHTRQDLTAFC*LPMQESHSTSS
Trigger: CGAGGAGGTGCTGTGCGACTCCTGCATCGGCAACAAGCAGAAGGCGGTCAAGTCCTGCCTGGTGTGCCAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS CAA 90 bp TCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATGCACGGGACACTaGCGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGCTGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: SVWQKSSIVLPCTGH*RASKSRMGSSSWWS
Trigger: AGACCACCAGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS TCA 72 bp AACCCCGCCGTACCCCCTACCGAGCAGTGCGCCCTTTaGAAGGATGCTTCTCTGAGCCTCAGCCTTCTCGCC +
Preference number: 6 (lower is better)
Translates to: NPAVPPTEQCAL*KDASLSLSLLA
Trigger: GGCGAGAAGGCTGAGGCTCAGAGAAGCATCCTTTCAAAGGGCGCACTGCTCGGTAGGGGGTACGGCGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp GCTACTGAATCAGCAGTGCCCATCCCTGCTCCTGCTTaGCACCTCGCCACACACCTCGTACAGGACGCAGGG +
Preference number: 6 (lower is better)
Translates to: ATESAVPIPAPA*HLATHLVQDAG
Trigger: CCCTGCGTCCTGTACGAGGTGTGTGGCGAGGTGGCAAGCAGGAGCAGGGATGGGCACTGCTGATTCAGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp GTCTGTCCTGGGCCAGATCTCTGTCCAGTGAGAGGCTaGATGCGGTCTGTCTCGGGAAAGCCCCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: VCPGPDLCPVRG*MRSVSGKPLSC
Trigger: GCAGGAGAGGGGCTTTCCCGAGACAGACCGCATGCAGCCTCTCACTGGACAGAGATCTGGCCCAGGACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp GTTTCCCGGCAGGAGGCGCTCACTTGGACTCCCCTGTaGTGTTTGGACGATGCTTCCCATTCACGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: VSRQEALTWTPL*CLDDASHSRSP
Trigger: GGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCGGGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp GCAAAGGTAACGGGTGGCTTCTTGGCAGCCCCCAGCTaGAGCCCTGCGTACGGCGACCTCTTGCCTTCCATA +
Preference number: 6 (lower is better)
Translates to: AKVTGGFLAAPS*SPAYGDLLPSI
Trigger: TATGGAAGGCAAGAGGTCGCCGTACGCAGGGCTCCAGCTGGGGGCTGCCAAGAAGCCACCCGTTACCTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CCA 72 bp GTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCACCCAAAGGCACAGCA +
Preference number: 6 (lower is better)
Translates to: VVSLVKRPGDEG*YDVRTPPKGTA
Trigger: TGCTGTGCCTTTGGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524956.4
CDS CCA 72 bp GCCACCGCCAGCCGCAGCTTCTCAGATGAGAGGGCATaGGAGACTGAACAGCAGAGTGTTCAACCCCGCCGT +
Preference number: 6 (lower is better)
Translates to: ATASRSFSDERA*ETEQQSVQPRR
Trigger: ACGGCGGGGTTGAACACTCTGCTGTTCAGTCTCCCATGCCCTCTCATCTGAGAAGCTGCGGCTGGCGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp AGCCCTGTGCCCCACAGAGTCCAGGATGAAGTGGCCTaGTGTCTCTTAGCGCAGGGGCCTTTGAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SPVPHRVQDEVA*CLLAQGPLRVW
Trigger: CCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCAGGCCACTTCATCCTGGACTCTGTGGGGCACAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp GGAATCTGTCATTGTGGCCGCCACCCAGGGTTAGGATaGCAAGCCCAAGAGGCCTGGAGCAGGTGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: GICHCGRHPGLG*QAQEAWSRCAL
Trigger: GAGAGCGCACCTGCTCCAGGCCTCTTGGGCTTGCCATCCTAACCCTGGGTGGCGGCCACAATGACAGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp TCCCTCCTGTCCTCGGCACAGGCTACCCACAGTGCTTaGGCAGGGATGCCGGGGGAACCTGTTTCTTCCATC +
Preference number: 6 (lower is better)
Translates to: SLLSSAQATHSA*AGMPGEPVSSI
Trigger: GATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS CCA 72 bp GTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCACCTCAAAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: VVSLVKRPGDEG*YDVRTPPQSSQ
Trigger: CTGGGAGCTTTGAGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS CCA 72 bp GTGGTCTCCTTGGTGAAGCGGCCAGGAGACGAGGGCTaGTATGATGTCCGGACCCCACCTGGATTCCACCAC +
Preference number: 6 (lower is better)
Translates to: VVSLVKRPGDEG*YDVRTPPGFHH
Trigger: GTGGTGGAATCCAGGTGGGGTCCGGACATCATACCAGCCCTCGTCTCCTGGCCGCTTCACCAAGGAGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526881.1
CDS CAA 72 bp AGCTCGCAGAAGGAGGCCTGGCACACCAGGCAGGACTaGACCGCCTTCTGCTTGTTGCCGATGCAGGAGTCG +
Preference number: 6 (lower is better)
Translates to: SSQKEAWHTRQD*TAFCLLPMQES
Trigger: CGACTCCTGCATCGGCAACAAGCAGAAGGCGGTCAAGTCCTGCCTGGTGTGCCAGGCCTCCTTCTGCGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS CAA 72 bp CAGAAGAGCTCCATCGTCTTGCCATGCACGGGACACTaGCGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: QKSSIVLPCTGH*RASKSRMGSSS
Trigger: GCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS CAA 72 bp CAACCCCGCCGTACCCCCTACCGAGCAGTGCGCCCTTaGAAAGGATGCTTCTCTGAGCCTCAGCCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: QPRRTPYRAVRP*KGCFSEPQPSR
Trigger: GCGAGAAGGCTGAGGCTCAGAGAAGCATCCTTTCAAAGGGCGCACTGCTCGGTAGGGGGTACGGCGGGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp GATGAAGTGGCCTGGTGTCTCTTAGCGCAGGGGCCTTaGAGGGTGTGGACGAGTCCCTGGTCTGGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: DEVAWCLLAQGP*RVWTSPWSGGQ
Trigger: CTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCAGGCCACTTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp GTCCCTCCTGTCCTCGGCACAGGCTACCCACAGTGCTaGGGCAGGGATGCCGGGGGAACCTGTTTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: VPPVLGTGYPQC*GRDAGGTCFFH
Trigger: ATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS CAA 90 bp AGAGTCCAGGATGAAGTGGCCTGGTGTCTCTTAGCGCAGGGGCCTTaGAGGGTGTGGACGAGTCCCTGGTCTGGTGGGCAGGCTAGCATC +
Preference number: 6 (lower is better)
Translates to: RVQDEVAWCLLAQGP*RVWTSPWSGGQASI
Trigger: GATGCTAGCCTGCCCACCAGACCAGGGACTCGTCCACACCCTCAAAGGCCCCTGCGCTAAGAGACACCAGGCCACTTCATCCTGGACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 72 bp TGGAGTTCTTGTCGTCCCCGGACTCGACAAACTGGATaGTGGGTCGCCGCCACTCATTGCCCGCGAACAGGG +
Preference number: 6 (lower is better)
Translates to: WSSCRPRTRQTG*WVAATHCPRTG
Trigger: CCCTGTTCGCGGGCAATGAGTGGCGGCGACCCATCATCCAGTTTGTCGAGTCCGGGGACGACAAGAACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000529011.1
ENST00000529495.1
CDS TCA 72 bp CTGAGCTGTTTCAGGCTTGCTGGGGTTCAGGATAGGTaGCCTTTCTGGCAGGCGTCTCGGCAGGGAGTGGGG +
Preference number: 6 (lower is better)
Translates to: LSCFRLAGVQDR*PFWQASRQGVG
Trigger: CCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTATCCTGAACCCCAGCAAGCCTGAAACAGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS GCA 72 bp AGAAGAGCTCCATCGTCTTGCCATGCACGGGACACTTaGGGGCCTCAAAGTCCCGGATGGGCTCGAGCAGCT +
Preference number: 6 (lower is better)
Translates to: RRAPSSCHARDT*GPQSPGWARAA
Trigger: AGCTGCTCGAGCCCATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 72 bp TGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTGCCATaGACGGGACACTTGCGGGCCTCAAAGTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: WSVWQKSSIVLP*TGHLRASKSRM
Trigger: CATCCGGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 72 bp AGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTTaGCATGCACGGGACACTTGCGGGCCTCAAAGTCCC +
Preference number: 6 (lower is better)
Translates to: RSGRSGRRAPSS*HARDTCGPQSP
Trigger: GGGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS GCA 72 bp CCAGCCCATTACCAAATGCAGCCGTCTGAACACGCGTaGAGCAGCCAGGGTGCCGCAACCGAAAATCCTGGG +
Preference number: 6 (lower is better)
Translates to: PAHYQMQPSEHA*SSQGAATENPG
Trigger: CCCAGGATTTTCGGTTGCGGCACCCTGGCTGCTGCACGCGTGTTCAGACGGCTGCATTTGGTAATGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp TCACAGAGCCTGAAGCATAGGCATGGGCAGAGCGGGTaGCGGACCTCCAAATGGCTCTCCCTCTGCACTGTG +
Preference number: 6 (lower is better)
Translates to: SQSLKHRHGQSG*RTSKWLSLCTV
Trigger: CACAGTGCAGAGGGAGAGCCATTTGGAGGTCCGGCACCCGCTCTGCCCATGCCTATGCTTCAGGCTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS GCA 72 bp AGGAGAAGCAGCATCCTGAGGATCAGAGAGGTCGAGTaGAGGGGGTATGGCATGTCCCCCGGTCCTGACCAC +
Preference number: 6 (lower is better)
Translates to: RRSSILRIREVE*RGYGMSPGPDH
Trigger: GTGGTCAGGACCGGGGGACATGCCATACCCCCTGCACTCGACCTCTCTGATCCTCAGGATGCTGCTTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS GCA 72 bp GGCCTCAGAGACCACTGTTCAGGGGTCTCTCTGCCCTaGATAGCCCCTTTCCCTCTCCTGAGCCCACCCAAT +
Preference number: 6 (lower is better)
Translates to: GLRDHCSGVSLP*IAPFPLLSPPN
Trigger: ATTGGGTGGGCTCAGGAGAGGGAAAGGGGCTATGCAGGGCAGAGAGACCCCTGAACAGTGGTCTCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 72 bp ATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTG +
Preference number: 6 (lower is better)
Translates to: IGDLSGRRLGRE*GRQPRGLETHL
Trigger: CAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529011.1
ENST00000529495.1
CDS CAA 72 bp CAGGTCTGGTCGGTCTGGCAGAAGAGCTCCATCGTCTaGCCATGCACGGGACACTTGCGGGCCTCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: QVWSVWQKSSIV*PCTGHLRASKS
Trigger: GGACTTTGAGGCCCGCAAGTGTCCCGTGCATGGCAAGACGATGGAGCTCTTCTGCCAGACCGACCAGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341846.10
ENST00000475051.4
CDS CAA 72 bp CTCAGCAACCAGTTGGGCTGCTTCCCTCTGACGCACTaGCTTCTCATCCGGGGAGCGGGGAGTCTCCGTCTT +
Preference number: 6 (lower is better)
Translates to: LSNQLGCFPLTH*LLIRGAGSLRL
Trigger: AAGACGGAGACTCCCCGCTCCCCGGATGAGAAGCAAGTGCGTCAGAGGGAAGCAGCCCAACTGGTTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529011.1
CDS CAA 72 bp TGGCCGGACCTCACCGGAGGGGCTGCCCTGCCGAGTTaGTACCCCAGGGACGATGATTATCACACTCCTCAA +
Preference number: 6 (lower is better)
Translates to: WPDLTGGAALPS*YPRDDDYHTPQ
Trigger: TTGAGGAGTGTGATAATCATCGTCCCTGGGGTACAAACTCGGCAGGGCAGCCCCTCCGGTGAGGTCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp CGGCAGGAGGCGCTCACTTGGACTCCCCTGTGCTGTTaGGACGATGCTTCCCATTCACGGAGCCCCACTTGT +
Preference number: 6 (lower is better)
Translates to: RQEALTWTPLCC*DDASHSRSPTC
Trigger: ACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CAA 90 bp AGAGTTTCCCGGCAGGAGGCGCTCACTTGGACTCCCCTGTGCTGTTaGGACGATGCTTCCCATTCACGGAGCCCCACTTGTGCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: RVSRQEALTWTPLCC*DDASHSRSPTCAKH
Trigger: GTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCCTCCTGCCGGGAAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS TCA 72 bp CAAGCATCATCCAGCCCATTACCAAATGCAGCCGTCTaGACACGCGTGCAGCAGCCAGGGTGCCGCAACCGA +
Preference number: 6 (lower is better)
Translates to: QASSSPLPNAAV*TRVQQPGCRNR
Trigger: TCGGTTGCGGCACCCTGGCTGCTGCACGCGTGTTCAGACGGCTGCATTTGGTAATGGGCTGGATGATGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS TCA 72 bp GAAGTTCCAGAAGGAGTCCAGCCTTCTCACAGAGCCTaGAGCATAGGCATGGGCAGAGCGGGTGCCGGACCT +
Preference number: 6 (lower is better)
Translates to: EVPEGVQPSHRA*SIGMGRAGAGP
Trigger: AGGTCCGGCACCCGCTCTGCCCATGCCTATGCTTCAGGCTCTGTGAGAAGGCTGGACTCCTTCTGGAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529040.1
ENST00000532833.1
CDS GCA 72 bp GGCGCTCACTTGGACTCCCCTGTGCTGTTTGGACGATaGTTCCCATTCACGGAGCCCCACTTGTGCCAAGCA +
Preference number: 6 (lower is better)
Translates to: GAHLDSPVLFGR*FPFTEPHLCQA
Trigger: TGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGAGTCCAAGTGAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp TGTTGCCCCCACATCCAGCGCAGCATCACACTGCTCTaGAGGGATTTCCACTCACCCACCCCGGAGGTTTAC +
Preference number: 6 (lower is better)
Translates to: CCPHIQRSITLL*RDFHSPTPEVY
Trigger: GTAAACCTCCGGGGTGGGTGAGTGGAAATCCCTGCAGAGCAGTGTGATGCTGCGCTGGATGTGGGGGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS GCA 72 bp CCTCGGCACAGGCTACCCACAGTGCTTGGGCAGGGATaGCGGGGGAACCTGTTTCTTCCATCACAGACATCA +
Preference number: 6 (lower is better)
Translates to: PRHRLPTVLGQG*RGNLFLPSQTS
Trigger: TGATGTCTGTGATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS CCA 72 bp ATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTA +
Preference number: 6 (lower is better)
Translates to: IGDLSGRRLGRE*GRQPRGLETHL
Trigger: TAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS CCA 72 bp ATAGGTGACCTTTCTGGCAGGCGTCTCGGCAGGGAGTaGGGCAGGCAACCACGAGGACTAGAGACACACCTT +
Preference number: 6 (lower is better)
Translates to: IGDLSGRRLGRE*GRQPRGLETHL
Trigger: AAGGTGTGTCTCTAGTCCTCGTGGTTGCCTGCCCCACTCCCTGCCGAGACGCCTGCCAGAAAGGTCACCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532833.1
CDS CAA 72 bp CTCCTGGAGGCATCTGCAGCTTCCATCGCAGGGTGCTaGGCTGAGCTGTTTCAGGCTTGCTGGGGTTCAGGA +
Preference number: 6 (lower is better)
Translates to: LLEASAASIAGC*AELFQACWGSG
Trigger: TCCTGAACCCCAGCAAGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGGAAGCTGCAGATGCCTCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS CAA 72 bp GACACCGTGGGCTTCCGGGACTCCGAGAAAATGGACTaGCGCAGCTCGCCCTTTTCGGCAAAGGTAACGGGT +
Preference number: 6 (lower is better)
Translates to: DTVGFRDSEKMD*RSSPFSAKVTG
Trigger: ACCCGTTACCTTTGCCGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGGAGTCCCGGAAGCCCACGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000627238.1
CDS CAA 90 bp TCCATGATGGACACCGTGGGCTTCCGGGACTCCGAGAAAATGGACTaGCGCAGCTCGCCCTTTTCGGCAAAGGTAACGGGTGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: SMMDTVGFRDSEKMD*RSSPFSAKVTGGFL
Trigger: CAAGAAGCCACCCGTTACCTTTGCCGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGGAGTCCCGGAAGCCCACGGTGTCCATCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341846.10
CDS CAA 90 bp TCCATGATGGACACCGTGGGCTTCCGGGACTCCGAGAAAATGGACTaGCGCAGCTCGCCCTTTTCGGCAAAGGTAACGGGTGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SMMDTVGFRDSEKMD*RSSPFSAKVTGGFF
Trigger: GAAGAAGCCACCCGTTACCTTTGCCGAAAAGGGCGAGCTGCGCAAGTCCATTTTCTCGGAGTCCCGGAAGCCCACGGTGTCCATCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475051.4
ENST00000627238.1
CDS CAA 90 bp AGATTTCCTGTCCCTCCTGTCCTCGGCACAGGCTACCCACAGTGCTaGGGCAGGGATGCCGGGGGAACCTGTTTCTTCCATCACAGACAT +
Preference number: 6 (lower is better)
Translates to: RFPVPPVLGTGYPQC*GRDAGGTCFFHHRH
Trigger: ATGTCTGTGATGGAAGAAACAGGTTCCCCCGGCATCCCTGCCCAAGCACTGTGGGTAGCCTGTGCCGAGGACAGGAGGGACAGGAAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS TCA 72 bp GGAGGCATCTGCAGCTTCCATCGCAGGGTGCTTGGCTaGGCTGTTTCAGGCTTGCTGGGGTTCAGGATAGGT +
Preference number: 6 (lower is better)
Translates to: GGICSFHRRVLG*AVSGLLGFRIG
Trigger: ACCTATCCTGAACCCCAGCAAGCCTGAAACAGCTCAGCCAAGCACCCTGCGATGGAAGCTGCAGATGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341846.10
ENST00000475051.4
ENST00000529011.1
ENST00000529040.1
ENST00000529495.1
ENST00000532833.1
CDS TCA 72 bp GGCCGTGGCCAGCATTGTGACCTAGAAATGGGACAGTaGGCGGCCAGGAGCCTGAACAGTTTCTGCAAGGCT +
Preference number: 6 (lower is better)
Translates to: GRGQHCDLEMGQ*AARSLNSFCKA
Trigger: AGCCTTGCAGAAACTGTTCAGGCTCCTGGCCGCTCACTGTCCCATTTCTAGGTCACAATGCTGGCCACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp AAGAGGCCTGGAGCAGGTGCGCTCTCTGAGCTTGGTTaGAAAGATGCTAGTCTAAGACGGGGCCGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: KRPGAGALSELG*KDASLRRGRLD
Trigger: GTCAAGGCGGCCCCGTCTTAGACTAGCATCTTTGCAACCAAGCTCAGAGAGCGCACCTGCTCCAGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp GGAGGAGTACTCCCAGACCCGGGAGGTGTAGTTACATaGCACCTCCCAACGTCTGCATGTGCCTTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: GGVLPDPGGVVT*HLPTSACAFSF
Trigger: GAAGCTGAAGGCACATGCAGACGTTGGGAGGTGCCATGTAACTACACCTCCCGGGTCTGGGAGTACTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524664.5
CDS TCA 72 bp GGGTATAGTATAGGACCCTGGGCCGGAAGGGACAACTaGGTGATGAGGCCTCAGAGACCACTGTTCAGGGGT +
Preference number: 6 (lower is better)
Translates to: GYSIGPWAGRDN*VMRPQRPLFRG
Trigger: ACCCCTGAACAGTGGTCTCTGAGGCCTCATCACTCAGTTGTCCCTTCCGGCCCAGGGTCCTATACTATACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CCA 72 bp ATGCTGAGGCCCTCAAGAAATAAGCAGGGTCTGTCCTaGGCCAGATCTCTGTCCAGTGAGAGGCTGCATGCG +
Preference number: 6 (lower is better)
Translates to: MLRPSRNKQGLS*ARSLSSERLHA
Trigger: CGCATGCAGCCTCTCACTGGACAGAGATCTGGCCCAGGACAGACCCTGCTTATTTCTTGAGGGCCTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp GCCCCATGGCCACAGGACCCTAGAGCCAGCCAACGCTaGGAGTTAAATAAACTCTGCAGTAGGAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: APWPQDPRASQR*ELNKLCSRRSS
Trigger: GCTGCTTCTCCTACTGCAGAGTTTATTTAACTCCCAGCGTTGGCTGGCTCTAGGGTCCTGTGGCCATGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS GCA 72 bp AGACAGCCCACTGCGACCCAGTGGTTTGGAAAACTCTaGAGTGGCCTGTCCCAAGGTGGTGAACTGATAAGG +
Preference number: 6 (lower is better)
Translates to: RQPTATQWFGKL*SGLSQGGELIR
Trigger: CCTTATCAGTTCACCACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526161.5
ENST00000530919.5
ENST00000533302.5
CDS CCA 72 bp CCCATACTAGTGGCAGCATCCACACAGCTGCTGGGCTaGGCCCGGCAATTAGATGTAGATCTGAACGAAACC +
Preference number: 6 (lower is better)
Translates to: PILVAASTQLLG*ARQLDVDLNET
Trigger: GGTTTCGTTCAGATCTACATCTAATTGCCGGGCCCAGCCCAGCAGCTGTGTGGATGCTGCCACTAGTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp CCTTTCCCTCTCCTGAGCCCACCCAATGTGCTGATCTaGACTTCCAGGCCAGATGTTTGGGGTGCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: PFPLLSPPNVLI*TSRPDVWGARR
Trigger: TCTTCTGGCACCCCAAACATCTGGCCTGGAAGTCAAGATCAGCACATTGGGTGGGCTCAGGAGAGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530919.5
CDS CAA 90 bp TCCCCTGTGCTGTTTGGACGATGCTTCCCATTCACGGAGCCCCACTaGTGCCAAGCACTGTGGAAGGGACTTTGTAGATGTCTCCTCACT +
Preference number: 6 (lower is better)
Translates to: SPVLFGRCFPFTEPH*CQALWKGLCRCLLT
Trigger: AGTGAGGAGACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAGCACAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CAA 90 bp ACCACGAGGACTAGAGACACACCTAGAGTGTGGAAGCTCCTCCCCTaGAAAGCTGGGCTGACCTTGCTTCAGCTGAGTCCAGGAGAAAAC +
Preference number: 6 (lower is better)
Translates to: TTRTRDTPRVWKLLP*KAGLTLLQLSPGEN
Trigger: GTTTTCTCCTGGACTCAGCTGAAGCAAGGTCAGCCCAGCTTTCAAGGGGAGGAGCTTCCACACTCTAGGTGTGTCTCTAGTCCTCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529040.1
CDS TCA 72 bp CTCAATGATCTTGAGCTGCAGCTGCTCCTTTTGCAATaGCAGCTCCGTCTCGGATATGCCAGGCACCATGCC +
Preference number: 6 (lower is better)
Translates to: LNDLELQLLLLQ*QLRLGYARHHA
Trigger: GGCATGGTGCCTGGCATATCCGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529044.5
CDS GCA 72 bp CCAGCTTATTTTCCACAACTCAGCAACCAGTTGGGCTaGTTCCCTCTGACGCACTTGCTTCTCATCCGGGGA +
Preference number: 6 (lower is better)
Translates to: PAYFPQLSNQLG*FPLTHLLLIRG
Trigger: TCCCCGGATGAGAAGCAAGTGCGTCAGAGGGAAGCAGCCCAACTGGTTGCTGAGTTGTGGAAAATAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529011.1
CDS GCA 72 bp CGAGGACTAGAGACACACCTGTCTCCACACTTGGTCTaGTGTGTGACTCAGAAAACACCTGCCCATCCTCTC +
Preference number: 6 (lower is better)
Translates to: RGLETHLSPHLV*CVTQKTPAHPL
Trigger: GAGAGGATGGGCAGGTGTTTTCTGAGTCACACAGCAGACCAAGTGTGGAGACAGGTGTGTCTCTAGTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529495.1
CDS GCA 72 bp TCACAGGGACACCATGTGATATTGCCATCGCCAAGGTaGACAAATGGCCTCCTGAACCCCAACCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SQGHHVILPSPR*TNGLLNPNPSA
Trigger: TGCAGAAGGGTTGGGGTTCAGGAGGCCATTTGTGCACCTTGGCGATGGCAATATCACATGGTGTCCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp ACCCAGCAAGAGCAGGAGGGAAACTCATTTACAGGGTaGTTGCCCTTTTCAGTGGACCTGGGGACAATGGGA +
Preference number: 6 (lower is better)
Translates to: TQQEQEGNSFTG*LPFSVDLGTMG
Trigger: TCCCATTGTCCCCAGGTCCACTGAAAAGGGCAAGCACCCTGTAAATGAGTTTCCCTCCTGCTCTTGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529044.5
ENST00000532195.1
CDS CCA 72 bp TTCCCATTCACGGAGCCCCACTTGTGCCAAGCACTGTaGAAGGGACTTTGTAGATGTCTCCTCACTGAGCCT +
Preference number: 6 (lower is better)
Translates to: FPFTEPHLCQAL*KGLCRCLLTEP
Trigger: AGGCTCAGTGAGGAGACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp GCCGGGATTATTTTTAGACAGCCCACTGCGACCCAGTaGTTTGGAAAACTCTGCAGTGGCCTGTCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: AGIIFRQPTATQ*FGKLCSGLSQG
Trigger: ACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCTAAAAATAATCCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530919.5
ENST00000533302.5
CDS CAA 72 bp GTCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTaGAGGGATGCTCAGACCTTGCTTAAACCACCAGCA +
Preference number: 6 (lower is better)
Translates to: VSSLPLCGPQQD*RDAQTLLKPPA
Trigger: TGCTGGTGGTTTAAGCAAGGTCTGAGCATCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS CAA 90 bp TCCTCCACCCAGCAAGAGCAGGAGGGAAACTCATTTACAGGGTGCTaGCCCTTTTCAGTGGACCTGGGGACAATGGGAAGAGAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: SSTQQEQEGNSFTGC*PFSVDLGTMGRERK
Trigger: CTTCCTTTCTCTTCCCATTGTCCCCAGGTCCACTGAAAAGGGCAAGCACCCTGTAAATGAGTTTCCCTCCTGCTCTTGCTGGGTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529044.5
ENST00000532195.1
CDS TCA 72 bp GAAAGAACCATTAACTGCCTGGGTCTTCATGAGCTATaGGGACGCTTCTCTGCCAGGGGCTCTCACAGTGCA +
Preference number: 6 (lower is better)
Translates to: ERTINCLGLHEL*GRFSARGSHSA
Trigger: TGCACTGTGAGAGCCCCTGGCAGAGAAGCGTCCTCATAGCTCATGAAGACCCAGGCAGTTAATGGTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530470.1
CDS TCA 72 bp TCAGCTCCTTGCCTTTGTGTGGTCCACAGCAGGACTTaGGGGATGCTCAGACCTTGCTTAAACCACCAGCAT +
Preference number: 6 (lower is better)
Translates to: SAPCLCVVHSRT*GMLRPCLNHQH
Trigger: ATGCTGGTGGTTTAAGCAAGGTCTGAGCATCCCTCAAGTCCTGCTGTGGACCACACAAAGGCAAGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531555.5
CDS GCA 72 bp GTTCGTGTAGTTGTTCACATAGCGATGGTCACCACCTaGGCCTATCAGTGTCCTGGTGCACAGCAGATACTC +
Preference number: 6 (lower is better)
Translates to: VRVVVHIAMVTT*AYQCPGAQQIL
Trigger: GAGTATCTGCTGTGCACCAGGACACTGATAGGCGCAGGTGGTGACCATCGCTATGTGAACAACTACACGAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp TTTGGACGATGCTTCCCATTCACGGAGCCCCACTTGTaGCAAGCACTGTGGAAGGGACTTTGTAGATGTCTC +
Preference number: 6 (lower is better)
Translates to: FGRCFPFTEPHL*QALWKGLCRCL
Trigger: GAGACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CCA 72 bp AGGTCACGTCTGCTAGAGTCTGCAAAGCCACCAGTTTaGAATCTGGCCCATACTAGTGGCAGCATCCACACA +
Preference number: 6 (lower is better)
Translates to: RSRLLESAKPPV*NLAHTSGSIHT
Trigger: TGTGTGGATGCTGCCACTAGTATGGGCCAGATTCCAAACTGGTGGCTTTGCAGACTCTAGCAGACGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CCA 72 bp ACCGGGATTATTTTTAGACAGCCCACTGCGACCCAGTaGTTTGGAAAACTCTGCAGTGGCCTGTCCCAAGGT +
Preference number: 6 (lower is better)
Translates to: TGIIFRQPTATQ*FGKLCSGLSQG
Trigger: ACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCTAAAAATAATCCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS CAA 72 bp TCTCCCCCAGCTTATTTTCCACAACTCAGCAACCAGTaGGGCTGCTTCCCTCTGACGCACTTGCTTCTCATC +
Preference number: 6 (lower is better)
Translates to: SPPAYFPQLSNQ*GCFPLTHLLLI
Trigger: GATGAGAAGCAAGTGCGTCAGAGGGAAGCAGCCCAACTGGTTGCTGAGTTGTGGAAAATAAGCTGGGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529011.1
CDS CAA 72 bp GGATTATTTTTAGACAGCCCACTGCGACCCAGTGGTTaGGAAAACTCTGCAGTGGCCTGTCCCAAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GLFLDSPLRPSG*ENSAVACPKVV
Trigger: CACCACCTTGGGACAGGCCACTGCAGAGTTTTCCAAACCACTGGGTCGCAGTGGGCTGTCTAAAAATAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000526161.5
ENST00000530919.5
ENST00000533302.5
CDS CAA 72 bp CTGTTTGGACGATGCTTCCCATTCACGGAGCCCCACTaGTGCCAAGCACTGTGGAAGGGACTTTGTAGATGT +
Preference number: 6 (lower is better)
Translates to: LFGRCFPFTEPH*CQALWKGLCRC
Trigger: ACATCTACAAAGTCCCTTCCACAGTGCTTGGCACAAGTGGGGCTCCGTGAATGGGAAGCATCGTCCAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526161.5
CDS TCA 72 bp GGGGAACCTGTTTCTTCCATCACAGACATCATAGACTaGCTCACAGTGCAGAGCTGGGAAGTCTCCCAGCAT +
Preference number: 6 (lower is better)
Translates to: GEPVSSITDIID*LTVQSWEVSQH
Trigger: ATGCTGGGAGACTTCCCAGCTCTGCACTGTGAGTCAGTCTATGATGTCTGTGATGGAAGAAACAGGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525887.5
CDS GCA 72 bp TCAATCTCAATGATCTTGAGCTGCAGCTGCTCCTTTTaGAATGACAGCTCCGTCTCGGATATGCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: SISMILSCSCSF*NDSSVSDMPGT
Trigger: GGTGCCTGGCATATCCGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529044.5
CDS CAA 72 bp AATGTCCCCCACATTTCACAGGGACACCATGTGATATaGCCATCGCCAAGGTGCACAAATGGCCTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: NVPHISQGHHVI*PSPRCTNGLLN
Trigger: GTTCAGGAGGCCATTTGTGCACCTTGGCGATGGCAATATCACATGGTGTCCCTGTGAAATGTGGGGGACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 72 bp TGGTATGATGTCCGGACCCCACCTGGATTCCACCACTaGGAGAAGTCCTTTGGGTCTGACATAAGTCAATCA +
Preference number: 6 (lower is better)
Translates to: WYDVRTPPGFHH*EKSFGSDISQS
Trigger: TGATTGACTTATGTCAGACCCAAAGGACTTCTCTCAGTGGTGGAATCCAGGTGGGGTCCGGACATCATACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526881.1
CDS GCA 72 bp CAGGATGTCCCTGCTCTGGAGGTCTCTTCCTATAGTTaGATAACTTTGGCAGCAAGTTCAAAGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: QDVPALEVSSYS*ITLAASSKEEE
Trigger: CTCCTCCTCCTTTGAACTTGCTGCCAAAGTTATGCAACTATAGGAAGAGACCTCCAGAGCAGGGACATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp AAATGCAGTACACCCCACAGGGAAAATAAGGTAATGTaGGTGAGAAGCTCAGTGAAATGCCCGGCATCGAGC +
Preference number: 6 (lower is better)
Translates to: KCSTPHRENKVM*VRSSVKCPASS
Trigger: GCTCGATGCCGGGCATTTCACTGAGCTTCTCACGCACATTACCTTATTTTCCCTGTGGGGTGTACTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 90 bp CACCATGCCAGTCGCCAAGGATCTAGCAGTAAGTTAAATACCATCTaGCTGTATTCTCAGGCCACTAGGGCTGGATATCCTAGCCATGTC +
Preference number: 6 (lower is better)
Translates to: HHASRQGSSSKLNTI*LYSQATRAGYPSHV
Trigger: GACATGGCTAGGATATCCAGCCCTAGTGGCCTGAGAATACAGCAAGATGGTATTTAACTTACTGCTAGATCCTTGGCGACTGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529044.5
ENST00000532195.1
CDS TCA 72 bp GCTTCAGGCCCTAAAGGGACTGGGTGGAAAAGGACTTaGCGATGTTGTTTCTCAGGTTCAGAGGTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: ASGPKGTGWKRT*RCCFSGSEVFC
Trigger: ACAGAAAACCTCTGAACCTGAGAAACAACATCGTCAAGTCCTTTTCCACCCAGTCCCTTTAGGGCCTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp GAAAATAAGGTAATGTGCGTGAGAAGCTCAGTGAAATaGCCGGCATCGAGCGAGCACTCAATCATTGTCAGC +
Preference number: 6 (lower is better)
Translates to: ENKVMCVRSSVK*PASSEHSIIVS
Trigger: GCTGACAATGATTGAGTGCTCGCTCGATGCCGGGCATTTCACTGAGCTTCTCACGCACATTACCTTATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp GCTTCATCCTCAATCTCAATGATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGCTCCGTCTCGGATATG +
Preference number: 6 (lower is better)
Translates to: ASSSISMILSCS*SFCNDSSVSDM
Trigger: CATATCCGAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529044.5
CDS GCA 72 bp GCTTCATCCTCAATCTCAATGATCTTGAGCTGCAGCTaGTCCTTTTGCAATGACAGCTCCGTCTGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: ASSSISMILSCS*SFCNDSSVCRE
Trigger: TTCTCTGCAGACGGAGCTGTCATTGCAAAAGGAGCAGCTGCAGCTCAAGATCATTGAGATTGAGGATGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532195.1
CDS CAA 72 bp ATGCTGTGTCTGGAGAGCAATCAGGGGTCCTTTCCTTaGGGGTATTCACGTCTAGCAGTCATTAACAAGGCT +
Preference number: 6 (lower is better)
Translates to: MLCLESNQGSFP*GYSRLAVINKA
Trigger: AGCCTTGTTAATGACTGCTAGACGTGAATACCCCAAAGGAAAGGACCCCTGATTGCTCTCCAGACACAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 90 bp AAGAATCATATGCTGTGTCTGGAGAGCAATCAGGGGTCCTTTCCTTaGGGGTATTCACGTCTAGCAGTCATTAACAAGGCTGTACTCTCA +
Preference number: 6 (lower is better)
Translates to: KNHMLCLESNQGSFP*GYSRLAVINKAVLS
Trigger: TGAGAGTACAGCCTTGTTAATGACTGCTAGACGTGAATACCCCAAAGGAAAGGACCCCTGATTGCTCTCCAGACACAGCATATGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 90 bp CGTTTGAAGCCAAATGATTGTCTTGCTGAAATGGCTTATCTGTCCTaGTGTGTGATTGAATGTCCCCCACATTTCACAGGGACACCATGT +
Preference number: 6 (lower is better)
Translates to: RLKPNDCLAEMAYLS*CVIECPPHFTGTPC
Trigger: ACATGGTGTCCCTGTGAAATGTGGGGGACATTCAATCACACACAAGGACAGATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 72 bp ATTGTCTTGCTGAAATGGCTTATCTGTCCTTGTGTGTaGTTGAATGTCCCCCACATTTCACAGGGACACCAT +
Preference number: 6 (lower is better)
Translates to: IVLLKWLICPCV*LNVPHISQGHH
Trigger: ATGGTGTCCCTGTGAAATGTGGGGGACATTCAATCACACACAAGGACAGATAAGCCATTTCAGCAAGACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp CCAAATGATTGTCTTGCTGAAATGGCTTATCTGTCCTaGTGTGTGATTGAATGTCCCCCACATTTCACAGGG +
Preference number: 6 (lower is better)
Translates to: PNDCLAEMAYLS*CVIECPPHFTG
Trigger: CCCTGTGAAATGTGGGGGACATTCAATCACACACAAGGACAGATAAGCCATTTCAGCAAGACAATCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 72 bp TCATTAGAAGGAGGATTTCGGGATCTGAGTGCCGTTTaGAGCCAAATGATTGTCTTGCTGAAATGGCTTATC +
Preference number: 6 (lower is better)
Translates to: SLEGGFRDLSAV*SQMIVLLKWLI
Trigger: GATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 72 bp GTCATTAGAAGGAGGATTTCGGGATCTGAGTGCCGTTaGAAGCCAAATGATTGTCTTGCTGAAATGGCTTAT +
Preference number: 6 (lower is better)
Translates to: VIRRRISGSECR*KPNDCLAEMAY
Trigger: ATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS CAA 90 bp ATCACTATTGTCATTAGAAGGAGGATTTCGGGATCTGAGTGCCGTTaGAAGCCAAATGATTGTCTTGCTGAAATGGCTTATCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ITIVIRRRISGSECR*KPNDCLAEMAYLSL
Trigger: CAAGGACAGATAAGCCATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGACAATAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS GCA 72 bp ACTATTGTCATTAGAAGGAGGATTTCGGGATCTGAGTaGCGTTTGAAGCCAAATGATTGTCTTGCTGAAATG +
Preference number: 6 (lower is better)
Translates to: TIVIRRRISGSE*RLKPNDCLAEM
Trigger: CATTTCAGCAAGACAATCATTTGGCTTCAAACGGCACTCAGATCCCGAAATCCTCCTTCTAATGACAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528870.5
CDS TCA 72 bp ACTCTTCCTCACTGGATGTTTGTTTCTTCTGTAACATaGAAAGGTTCAACTAAAAGCCACTGGATGCTAACA +
Preference number: 6 (lower is better)
Translates to: TLPHWMFVSSVT*KGSTKSHWMLT
Trigger: TGTTAGCATCCAGTGGCTTTTAGTTGAACCTTTTCATGTTACAGAAGAAACAAACATCCAGTGAGGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530470.1