Pregenerated sensors for TRIM16L (Homo sapiens)

Ensembl gene IDs: ENSG00000108448

Ensembl transcript IDs: ENST00000449552.6

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GATGAATACAAAAGTGCAGGGTGGTGGAAAGTGCCCTGCTGGGAGTaGCTGGATTCTAATTTCCCCTATGTGCTAGTTGGCTGGGTGACC	+
Preference number: 5 (lower is better) Translates to: DEYKSAGWWKVPCWE*LDSNFPYVLVGWVT Trigger: GGTCACCCAGCCAACTAGCACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS CCA 90 bp	GTGCCTGATGAATACAAAAGTGCAGGGTGGTGGAAAGTGCCCTGCTaGGAGTGCCTGGATTCTAATTTCCCCTATGTGCTAGTTGGCTGG	+
Preference number: 5 (lower is better) Translates to: VPDEYKSAGWWKVPC*ECLDSNFPYVLVGW Trigger: CCAGCCAACTAGCACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS GCA 90 bp	ATTGTGCCTGATGAATACAAAAGTGCAGGGTGGTGGAAAGTGCCCTaGTGGGAGTGCCTGGATTCTAATTTCCCCTATGTGCTAGTTGGC	+
Preference number: 5 (lower is better) Translates to: IVPDEYKSAGWWKVP*WECLDSNFPYVLVG Trigger: GCCAACTAGCACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATCAGGCACAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS TCA 90 bp	AAGTGGGCAGATGGATGCCTACTATTAATAAAAGCAACAACTGATTaGTCCCTTACTTGGTGTCTGGCCCTGTGTCAACTGTTGCATGTC	+
Preference number: 5 (lower is better) Translates to: KWADGCLLLIKATTD*SLTWCLALCQLLHV Trigger: GACATGCAACAGTTGACACAGGGCCAGACACCAAGTAAGGGATCAATCAGTTGTTGCTTTTATTAATAGTAGGCATCCATCTGCCCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS TCA 90 bp	GTACAAGTGGGCAGATGGATGCCTACTATTAATAAAAGCAACAACTaGTTGATCCCTTACTTGGTGTCTGGCCCTGTGTCAACTGTTGCA	+
Preference number: 5 (lower is better) Translates to: VQVGRWMPTINKSNN*LIPYLVSGPVSTVA Trigger: TGCAACAGTTGACACAGGGCCAGACACCAAGTAAGGGATCAATCAGTTGTTGCTTTTATTAATAGTAGGCATCCATCTGCCCACTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS GCA 72 bp	AAAAGTGCAGGGTGGTGGAAAGTGCCCTGCTGGGAGTaGCTGGATTCTAATTTCCCCTATGTGCTAGTTGGC	+
Preference number: 6 (lower is better) Translates to: KSAGWWKVPCWE*LDSNFPYVLVG Trigger: GCCAACTAGCACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS GCA 72 bp	TGCCTGATGAATACAAAAGTGCAGGGTGGTGGAAAGTaGCCTGCTGGGAGTGCCTGGATTCTAATTTCCCCT	+
Preference number: 6 (lower is better) Translates to: CLMNTKVQGGGK*PAGSAWILISP Trigger: AGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS GCA 72 bp	GATGAATACAAAAGTGCAGGGTGGTGGAAAGTGCCCTaGTGGGAGTGCCTGGATTCTAATTTCCCCTATGTG	+
Preference number: 6 (lower is better) Translates to: DEYKSAGWWKVP*WECLDSNFPYV Trigger: CACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS CCA 72 bp	GAATACAAAAGTGCAGGGTGGTGGAAAGTGCCCTGCTaGGAGTGCCTGGATTCTAATTTCCCCTATGTGCTA	+
Preference number: 6 (lower is better) Translates to: EYKSAGWWKVPC*ECLDSNFPYVL Trigger: TAGCACATAGGGGAAATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS CCA 72 bp	GATATTGTGCCTGATGAATACAAAAGTGCAGGGTGGTaGAAAGTGCCCTGCTGGGAGTGCCTGGATTCTAAT	+
Preference number: 6 (lower is better) Translates to: DIVPDEYKSAGW*KVPCWECLDSN Trigger: ATTAGAATCCAGGCACTCCCAGCAGGGCACTTTCCACCACCCTGCACTTTTGTATTCATCAGGCACAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS CCA 72 bp	TGCCTGGATTCTAATTTCCCCTATGTGCTAGTTGGCTaGGTGACCTACAACAAGCTACTTTTCATTCTTGGG	+
Preference number: 6 (lower is better) Translates to: CLDSNFPYVLVG*VTYNKLLFILG Trigger: CCCAAGAATGAAAAGTAGCTTGTTGTAGGTCACCCAGCCAACTAGCACATAGGGGAAATTAGAATCCAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS TCA 72 bp	GGCAGATGGATGCCTACTATTAATAAAAGCAACAACTaGTTGATCCCTTACTTGGTGTCTGGCCCTGTGTCA	+
Preference number: 6 (lower is better) Translates to: GRWMPTINKSNN*LIPYLVSGPVS Trigger: TGACACAGGGCCAGACACCAAGTAAGGGATCAATCAGTTGTTGCTTTTATTAATAGTAGGCATCCATCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS TCA 72 bp	GATGGATGCCTACTATTAATAAAAGCAACAACTGATTaGTCCCTTACTTGGTGTCTGGCCCTGTGTCAACTG	+
Preference number: 6 (lower is better) Translates to: DGCLLLIKATTD*SLTWCLALCQL Trigger: CAGTTGACACAGGGCCAGACACCAAGTAAGGGATCAATCAGTTGTTGCTTTTATTAATAGTAGGCATCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449552.6
CDS CCA 72 bp	CTTTTCATTCTTGGGTGTTTCCTTCTTACGTACAAGTaGGCAGATGGATGCCTACTATTAATAAAAGCAACA	+
Preference number: 6 (lower is better) Translates to: LFILGCFLLTYK*ADGCLLLIKAT Trigger: TGTTGCTTTTATTAATAGTAGGCATCCATCTGCCCACTTGTACGTAAGAAGGAAACACCCAAGAATGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449552.6

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