RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRIB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000071575

Ensembl transcript IDs: ENST00000155926.8, ENST00000155926.9, ENST00000381465.2, ENST00000405331.3, ENST00000483034.1

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTaGAGCCGCCCTCCTGGGAACGTGAGGACAGGGCTCCTGCTGCGC +
Preference number: 1 (lower is better)
Translates to: IKGKSMAALSPGYEG*SRPPGNVRTGLLLR
Trigger: GCGCAGCAGGAGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 90 bp CCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTCCTGGGAACGTaGGGACAGGGCTCCTGCTGCGCAGGCATAAAGCATCCAAGAGTC +
Preference number: 1 (lower is better)
Translates to: PCLLVTKGEAALLGT*GQGSCCAGIKHPRV
Trigger: GACTCTTGGATGCTTTATGCCTGCGCAGCAGGAGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR GCA 90 bp TACTCAGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTaGCCTCGCTCACTCCTGGAACCTGCTAAGTCTCCGTGGGGCATG +
Preference number: 1 (lower is better)
Translates to: YSARQFVSPGRTPFR*PRSLLEPAKSPWGM
Trigger: CATGCCCCACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCTGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 90 bp CATCCCACGCCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTaGAGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTT +
Preference number: 1 (lower is better)
Translates to: HPTPLAPMLRGQSAP*RFSCSEPRNLRVCL
Trigger: AAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCGTGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 90 bp CCCCATGCTACGTGGTCAGTCAGCTCCTTGAAGGTTTTCCTGCTCTaGACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCAGCCAG +
Preference number: 1 (lower is better)
Translates to: PHATWSVSSLKVFLL*TKKLKSVSFLLLSQ
Trigger: CTGGCTGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR GCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTaGTACTCAGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTC +
Preference number: 1 (lower is better)
Translates to: RFSCSEPRNLRVCLS*YSARQFVSPGRTPF
Trigger: GAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCTGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 90 bp AGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTaGGGTACTGGGAACACAAATATTTATGCCAAAAGAGTTCTGTAT +
Preference number: 1 (lower is better)
Translates to: RTISQNIYRQSNPNK*GTGNTNIYAKRVLY
Trigger: ATACAGAACTCTTTTGGCATAAATATTTGTGTTCCCAGTACCTCACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCCGCCTCTTGCCCCCATaGTACGTGGTCAGTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSRLLPP*YVVSQL
Trigger: GAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCG...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCGCCCTCGCTCACTCCTaGAACCTGCTAAGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSALAHS*NLLSLR
Trigger: ACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGC...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCATGCTAACAGTGCGATaGCAGGATGTGTGTTTGAGG +
Preference number: 2 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPMLTVR*QDVCLR
Trigger: CCTCAAACACACATCCTGGCATCGCACTGTTAGCAT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCATGCATCTGGACGTTTaGCTTCTAATAGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPMHLDV*LLIASC
Trigger: GCAGGAAGCTATTAGAAGTCAAACGTCCAGATGCAT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTACCATCCCACGCCTCTTaGCCCCATGCTACGTGGTCA +
Preference number: 2 (lower is better)
Translates to: GFCPNQRALQALKGSFSVPSHAS*PHATWS
Trigger: TGACCACGTAGCATGGGGGCAAGAGGCGTGGGATGG...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGCCATCCCACGCCTCTTaGCCCCATGCTACGTGGTCA +
Preference number: 2 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRPSHAS*PHATWS
Trigger: TGACCACGTAGCATGGGGGCAAGAGGCGTGGGATGG...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCTGGGGTAGGCGGAAGTaGCCCAAGTGGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSWGRRK*PKWQGV
Trigger: CACCCCTTGCCACTTGGGCCACTTCCGCCTACCCCA...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAATGGGGTAGGCGGAAGTaGCCCAAGTGGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: IYILESTCHLPKNRTISQWGRRK*PKWQGV
Trigger: CACCCCTTGCCACTTGGGCCACTTCCGCCTACCCCA...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCGGTCAGTCAGCTCCTTaGAGGTTTTCCTGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: EYCKSIRLQELAKISGHCGQSAP*RFSCSE
Trigger: TTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACC...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAAAGAACTCCTTTCCGCTaGCCTCGCTCACTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: IRLQELAKISGHCYHLSKRTPFR*PRSLLE
Trigger: TTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCT...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAATGCCCCCATGCTACGTaGTCAGTCAGCTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: IRLQELAKISGHCYHLSKCPHAT*SVSSLK
Trigger: CTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCA...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTCGGAAGTGGCCCAAGTaGCAAGGGGTGGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSRKWPK*QGVVSQ
Trigger: CTGGGAGACCACCCCTTGCCACTTGGGCCACTTCCG...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTATGCCCCCATGCTACGTaGTCAGTCAGCTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: GFCPNQRALQALKGSFSVCPHAT*SVSSLK
Trigger: CTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCA...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAGAACTCCTTTCCGCTaGCCTCGCTCACTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: STDSSNIYILESTCHLPKRTPFR*PRSLLE
Trigger: TTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCT...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATGCCCTCGCTCACTCCTaGAACCTGCTAAGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNALAHS*NLLSLR
Trigger: ACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGC...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGGAACAAAATGAAAAGTaGGGTAGGCGGAAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QRQMFSCDQSTAKASDSREQNEK*GRRKWP
Trigger: GGGCCACTTCCGCCTACCCCACTTTTCATTTTGTTC...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR CAA 90 bp TTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGAGCTaGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: FSCDQSTAKASDSRS*LKSQAIAIISAKRN
Trigger: ATTCCTCTTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTGGTCAGTCAGCTCCTTaGAGGTTTTCCTGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSGQSAP*RFSCSE
Trigger: TTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACC...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAACTCAGCAAAGAGGAATaGCTGTCACACAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: STDSSNIYILESTCHLPKLSKEE*LSHKPS
Trigger: TGAGGGTTTGTGTGACAGGCATTCCTCTTTGCTGAG...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCATGCATCTGGACGTTTaGCTTCTAATAGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSMHLDV*LLIASC
Trigger: GCAGGAAGCTATTAGAAGTCAAACGTCCAGATGCAT...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAAGAGTGTGTCTTTCTTaGTACTCAGCCAGGCAATTC +
Preference number: 2 (lower is better)
Translates to: IYILESTCHLPKNRTISQRVCLS*YSARQF
Trigger: GAATTGCCTGGCTGAGTAGCAAGAAAGACACACTCT...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTCTCAGCAAAGAGGAATaGCTGTCACACAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSLSKEE*LSHKPS
Trigger: TGAGGGTTTGTGTGACAGGCATTCCTCTTTGCTGAG...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATGAACAAAATGAAAAGTaGGGTAGGCGGAAGTGGCCC +
Preference number: 2 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNEQNEK*GRRKWP
Trigger: GGGCCACTTCCGCCTACCCCACTTTTCATTTTGTTC...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGAAGGTTTTCCTGCTCTaGACCAAGAAACTTAAGAGT +
Preference number: 2 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRKVFLL*TKKLKS
Trigger: ACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTT...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTAAAAATCTCAGGCCATTaGTATCATCTCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: GFCPNQRALQALKGSFSVKISGH*YHLSKE
Trigger: CTCTTTGCTGAGATGATAGCAATGGCCTGAGATTTT...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTTTGCGATCAGAGTACTaGAAAAGCATCAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSLRSEY*KSIRLQ
Trigger: CTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAA...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGTTAGAAGAAATGAGTTaGAGTGAGCGATTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRLEEMS*SERLRD
Trigger: GTCTCTTAATCGCTCACTTCAACTCATTTCTTCTAA...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATAGAGTGTGTCTTTCTTaGTACTCAGCCAGGCAATTC +
Preference number: 2 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNRVCLS*YSARQF
Trigger: GAATTGCCTGGCTGAGTAGCAAGAAAGACACACTCT...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCACATGTGGGACAACCTaGTTTGTTTCACTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSTCGTT*FVSLVS
Trigger: AGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGT...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR TCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAAGAAATGAGTTGAAGTaGGCGATTAAGAGACACAAA +
Preference number: 2 (lower is better)
Translates to: IYILESTCHLPKNRTISQRNELK*AIKRHK
Trigger: TTTGTGTCTCTTAATCGCTCACTTCAACTCATTTCT...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTAAAATCTCAGGCCATTaGTATCATCTCAGCAAAGAG +
Preference number: 2 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSKISGH*YHLSKE
Trigger: CTCTTTGCTGAGATGATAGCAATGGCCTGAGATTTT...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCTACAAAGGTGCGTATTaGGATAGAGAGCTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSYKGAY*DRELFL
Trigger: TAAAAACAGCTCTCTATCCCAATACGCACCTTTGTA...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAGAACAAGTGAGGTACTaGGAACACAAATATTTATGC +
Preference number: 2 (lower is better)
Translates to: IYILESTCHLPKNRTISQEQVRY*EHKYLC
Trigger: GCATAAATATTTGTGTTCCCAGTACCTCACTTGTTC...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR GCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATAGACAAATGTTTAGTTaGGATCAGAGTACTGCAAAA +
Preference number: 2 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNRQMFS*DQSTAK
Trigger: TTTTGCAGTACTCTGATCGCAACTAAACATTTGTCT...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR CCA 72 bp CTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTCCTaGGAACGTGAGGACAGGGCTCCTGCTGCGCAGGCA +
Preference number: 3 (lower is better)
Translates to: LVSWLRRVKPPS*EREDRAPAAQA
Trigger: TGCCTGCGCAGCAGGAGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp CTGGTTACGAAGGGTGAAGCCGCCCTCCTGGGAACGTaGGGACAGGGCTCCTGCTGCGCAGGCATAAAGCAT +
Preference number: 3 (lower is better)
Translates to: LVTKGEAALLGT*GQGSCCAGIKH
Trigger: ATGCTTTATGCCTGCGCAGCAGGAGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp AAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTaGAGCCGCCCTCCTGGGAACGTGAGGACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: KSMAALSPGYEG*SRPPGNVRTGL
Trigger: GAGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR GCA 72 bp AGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTaGCCTCGCTCACTCCTGGAACCTGCTAAGTCTCCG +
Preference number: 3 (lower is better)
Translates to: RQFVSPGRTPFR*PRSLLEPAKSP
Trigger: CGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCCCCATCCCACGCCTCTaGCCCCCATGCTACGTGGTC +
Preference number: 3 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSPIPRL*PPCYVV
Trigger: GACCACGTAGCATGGGGGCAAGAGGCGTGGGATGGG...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp CCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTaGAGGTTTTCCTGCTCTGAACCAAGAAACTTAAGA +
Preference number: 3 (lower is better)
Translates to: PLAPMLRGQSAP*RFSCSEPRNLR
Trigger: TCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR GCA 72 bp GGCTCCTGCTGCGCAGGCATAAAGCATCCAAGAGTCTaGACATACATGCCACACACTATTATGAAGCACAGA +
Preference number: 3 (lower is better)
Translates to: GSCCAGIKHPRV*TYMPHTIMKHR
Trigger: TCTGTGCTTCATAATAGTGTGTGGCATGTATGTGCAGACTCTTGGATGCTTTATGCCTGCGCAGCAGGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp AGCTTTCAGCTAATTATCCTTCCCGCTTGTCTCTACTaGGGGTTTTTGTCCAAACCAGAGGGCCTTACAAGC +
Preference number: 3 (lower is better)
Translates to: SFQLIILPACLY*GFLSKPEGLTS
Trigger: GCTTGTAAGGCCCTCTGGTTTGGACAAAAACCCTCAGTAGAGACAAGCGGGAAGGATAATTAGCTGAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAATTGAGGCAGAGAGTTTaGATTCTGTCAGGATCTGCA +
Preference number: 3 (lower is better)
Translates to: IRLQELAKISGHCYHLSKLRQRV*ILSGSA
Trigger: TGCAGATCCTGACAGAATCAAAACTCTCTGCCTCAA...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAAAATGCATCTGGACGTTaGACTTCTAATAGCTTCCTG +
Preference number: 3 (lower is better)
Translates to: IRLQELAKISGHCYHLSKNASGR*TSNSFL
Trigger: CAGGAAGCTATTAGAAGTCAAACGTCCAGATGCATT...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAATCAGACTCCAGGAGCTaGCTAAAATCTCAGGCCATT +
Preference number: 3 (lower is better)
Translates to: STDSSNIYILESTCHLPKSDSRS*LKSQAI
Trigger: AATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGA...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATTGCCAGGATGTGTGTTaGAGGCAGAGAGTTTTGATT +
Preference number: 3 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNCQDVC*RQRVLI
Trigger: AATCAAAACTCTCTGCCTCAAACACACATCCTGGCA...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR-3UTR CAA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATAATGCATCTGGACGTTaGACTTCTAATAGCTTCCTG +
Preference number: 3 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNNASGR*TSNSFL
Trigger: CAGGAAGCTATTAGAAGTCAAACGTCCAGATGCATT...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp CAGCATGTAATATGTCATCCCAAGTCAACCCGTAATTaGAGTACTGGCTTAATACATCACAATGTGACATTT +
Preference number: 3 (lower is better)
Translates to: QHVICHPKSTRN*STGLIHHNVTF
Trigger: AAATGTCACATTGTGATGTATTAAGCCAGTACTTCAATTACGGGTTGACTTGGGATGACATATTACATGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
3UTR TCA 72 bp TCACAAAACATATACAGGCAGTCAAATCCGAACAAGTaGGGTACTGGGAACACAAATATTTATGCCAAAAGA +
Preference number: 3 (lower is better)
Translates to: SQNIYRQSNPNK*GTGNTNIYAKR
Trigger: TCTTTTGGCATAAATATTTGTGTTCCCAGTACCTCACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
CDS-3UTR CCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCTGGGGTAGGCGGAAGTaGCCCAAGTGGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSWGRRK*PKWQGV
Trigger: CACCCCTTGCCACTTGGGCCACTTCCGCCTACCCCA...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCGCAGAATGCTTCGGATaGGGCACTTGGCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSAECFG*GTWPWA
Trigger: CGCCCAAGGCCAAGTGCCTCATCCGAAGCATTCTGC...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCGGACAGGGCTCCTGCTaGGCAGGCATAAAGCATCCA +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSGQGSC*AGIKHP
Trigger: TGGATGCTTTATGCCTGCGCAGCAGGAGCCCTGTCC...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCACGTCCGGCACCAGCTaGTCAGACACTTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSTSGTS*SDTSLA
Trigger: TGCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGT...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp AGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTGCCCTCGCTCACTAGTTCTCTTCCATGTTaGCGTCCGGCACCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQAIRVPRKNSFPLPSLTSSLPC*RPAPAG
Trigger: ACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACT...AGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CACGCCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTGAAGGTTTTCCTGACACGTCGGCTGCTTTaGCCGAGTAGCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: HASCPHATWSVSSLKVFLTRRLL*PSSCHW
Trigger: CCAGTGGCAGCTACTCGGGCAAAGCAGCCGACGTGT...CAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCAGTCTCCGTGGGGCATaGGCTCAGTTAAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPSLRGA*AQLKKG
Trigger: CCCTTTCTTTAACTGAGCTCATGCCCCACGGAGACT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCCCTCTCTCAGCTTCTTaGAGGTGCGGACGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPPLSAS*RCGRRN
Trigger: ATTCCTTCGTCCGCACCTGCAAGAAGCTGAGAGAGG...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTCTGGTAGAACAGTCTaGCTGCCTCCTCCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPSGRTV*LPPPLS
Trigger: TGAGAGAGGAGGAGGCAGCCAGACTGTTCTACCAGA...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTCTGGAATGTTGAACTaGCCACGCCGGATCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPSGMLN*PRRILL
Trigger: CAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGA...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCCCCGCTTGTCTCTACTaGGGGTTTTTGTCCAAACCA +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPPACLY*GFLSKP
Trigger: TGGTTTGGACAAAAACCCTCAGTAGAGACAAGCGGG...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp CACGCCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTGAAGGTTTTCCTGCTGGGTTCAATGTCATaGAAAGGGTACCGCCCCACC +
Preference number: 4 (lower is better)
Translates to: HASCPHATWSVSSLKVFLLGSMS*KGYRPT
Trigger: GGTGGGGCGGTACCCTTTCCATGACATTGAACCCAG...CAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp AGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTGCCCTCGCTCACTCTCAGCAAAGAGGAATaGCTGTCACACAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: SQAIRVPRKNSFPLPSLTLSKEE*LSHKPS
Trigger: TGAGGGTTTGTGTGACAGGCATTCCTCTTTGCTGAG...AGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSVENQG*SRISCE
Trigger: CTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTAC...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCCCTGGTTACGAAGGGTaGAGCCGCCCTCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EYCKSIRLQELAKISGHCPGYEG*SRPPGN
Trigger: GTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGG...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CACGCCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTGAAGGTTTTCCTGCTTTGCCCGAGTAGCTaGCACTGGTGTTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: HASCPHATWSVSSLKVFLLCPSS*HWCSRS
Trigger: AGATCTTGAACACCAGTGGCAGCTACTCGGGCAAAG...CAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCAAGCATCCAAGAGTCTaGACATACATGCCACACACT +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPKHPRV*TYMPHT
Trigger: AGTGTGTGGCATGTATGTGCAGACTCTTGGATGCTT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGGCCCTCCTGGGAACGTaGGGACAGGGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRALLGT*GQGSCC
Trigger: GCAGCAGGAGCCCTGTCCTCACGTTCCCAGGAGGGC...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCAAAATCTCAGGCCATTaGTATCATCTCAGCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSKISGH*YHLSKE
Trigger: CTCTTTGCTGAGATGATAGCAATGGCCTGAGATTTT...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAACGGAAGTGGCCCAAGTaGCAAGGGGTGGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IRLQELAKISGHCYHLSKRKWPK*QGVVSQ
Trigger: CTGGGAGACCACCCCTTGCCACTTGGGCCACTTCCG...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTTAGAAGAAATGAGTTaGAGTGAGCGATTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPLEEMS*SERLRD
Trigger: GTCTCTTAATCGCTCACTTCAACTCATTTCTTCTAA...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp AGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTGCCCTCGCTCACTAAGTCAACCCGTAATTaGAGTACTGGCTTAATACAT +
Preference number: 4 (lower is better)
Translates to: SQAIRVPRKNSFPLPSLTKSTRN*STGLIH
Trigger: ATGTATTAAGCCAGTACTTCAATTACGGGTTGACTT...AGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCGGGCGACAGAGTCTCTaGAATGTTGAACTGGCCACG +
Preference number: 4 (lower is better)
Translates to: EYCKSIRLQELAKISGHCGRQSL*NVELAT
Trigger: CGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCC...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTAGTGAAGCCGCCCTCCTaGGAACGTGAGGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: GFCPNQRALQALKGSFSVVKPPS*EREDRA
Trigger: AGCCCTGTCCTCACGTTCCCAGGAGGGCGGCTTCAC...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAAGGCCGCCTTGTCTCCTaGTTACGAAGGGTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: IRLQELAKISGHCYHLSKGRLVS*LRRVKP
Trigger: CGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCC...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAACACGCCGGATCTTGCTaGAGAGGGAGCTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: IRLQELAKISGHCYHLSKHAGSC*RGSWVQ
Trigger: TTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTG...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTCGAGGTCAGCCGCTCTaGGGGCTCCCGACGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSRGQPL*GLPTQN
Trigger: ATTCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCG...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCAGACAAATGTTTAGTTaGGATCAGAGTACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPRQMFS*DQSTAK
Trigger: TTTTGCAGTACTCTGATCGCAACTAAACATTTGTCT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTCAGCTTCTTGCAGGTaGGGACGAAGGAATGCATGT +
Preference number: 4 (lower is better)
Translates to: EYCKSIRLQELAKISGHCSASCR*GRRNAC
Trigger: ACATGCATTCCTTCGTCCGCACCTGCAAGAAGCTGA...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCCGCCTCTTGCCCCCATaGTACGTGGTCAGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSRLLPP*YVVSQL
Trigger: GAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCG...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCACCATCCCACGCCTCTTaGCCCCATGCTACGTGGTCA +
Preference number: 4 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSPSHAS*PHATWS
Trigger: TGACCACGTAGCATGGGGGCAAGAGGCGTGGGATGG...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATCCCCCGTCATGGCAGTaGGCCACTGCCGAGGCAATC +
Preference number: 4 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNPPSWQ*ATAEAI
Trigger: GATTGCCTCGGCAGTGGCCCACTGCCATGACGGGGG...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAACCAGGCTTTCCAGCTTaGCCCGAGTCCTCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKPGFPA*PESSLR
Trigger: ACGAAGAGAGGACTCGGGTCAAGCTGGAAAGCCTGG...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGGAGTCTCTGGAATGTTaGACTGGCCACGCCGGATCT +
Preference number: 4 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRESLEC*TGHAGS
Trigger: AGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTC...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGCAGGCAAAAGCACGGTaGCAGGGATTCCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRQAKAR*QGFLVA
Trigger: TGCTACCAGGAATCCCTGGCACCGTGCTTTTGCCTG...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATGCTCCACACGTCGGCTaGTTTGCCCGAGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNAPHVG*FARVAA
Trigger: GGCAGCTACTCGGGCAAAGCAGCCGACGTGTGGAGC...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGTGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRWSRIS*EVSRSE
Trigger: CTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCA...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGAGAACTCCTTTCCGCTaGCCTCGCTCACTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRRTPFR*PRSLLE
Trigger: TTCCAGGAGTGAGCGAGGGCAGCGGAAAGGAGTTCT...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCAACCGCCCCACCAACATaGTGTACAGCATCACCCCCA +
Preference number: 4 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSTAPPT*CTASPP
Trigger: TGGGGGTGATGCTGTACACCATGTTGGTGGGGCGGT...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAAGCCCTCGCTCACTCCTaGAACCTGCTAAGTCTCCGT +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKALAHS*NLLSLR
Trigger: ACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGC...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTAATTCCTGGTAGCAGCTaGTATCAAACACGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GFCPNQRALQALKGSFSVIPGSS*YQTRGR
Trigger: CCGGCCACGTGTTTGATATCAGCTGCTACCAGGAAT...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAAATGGCAGTGGGCCACTaGCGAGGCAATCTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKMAVGH*RGNLVE
Trigger: TTCTACCAGATTGCCTCGGCAGTGGCCCACTGCCAT...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTTGCGATCAGAGTACTaGAAAAGCATCAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: EYCKSIRLQELAKISGHCLRSEY*KSIRLQ
Trigger: CTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAA...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp TCACCTACCCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCCCGAGTAGCTGCCACTaGTGTTCAAGATCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPTQKQDHFTKHIQAVKSPSSCH*CSRSLG
Trigger: GCCCAGAGATCTTGAACACCAGTGGCAGCTACTCGG...GGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGGGTAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAAGGTGTTCAAGATCTCTaGGCTTACGTAAGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: IYILESTCHLPKNRTISQGVQDL*AYVSRA
Trigger: TGCCCGGCTTACGTAAGCCCAGAGATCTTGAACACC...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAATCAAGGGCAAATCCATaGCCGCCTTGTCTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKSRANP*PPCLLV
Trigger: AACCAGGAGACAAGGCGGCCATGGATTTGCCCTTGA...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
3UTR CAA 72 bp GATCAGAGTACTGCAAAAGCATCAGACTCCAGGAGCTaGCTAAAATCTCAGGCCATTGCTATCATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DQSTAKASDSRS*LKSQAIAIISA
Trigger: TGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
CDS-3UTR CCA 90 bp ATTTACATACTAGAGTCCACGTGTCACCTACCCAAAAACAGGACCATTTCACAACCTGCTAAGTCTCCGTaGGGCATGAGCTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: IYILESTCHLPKNRTISQPAKSP*GMSSVK
Trigger: TTTAACTGAGCTCATGCCCCACGGAGACTTAGCAGG...TTGTGAAATGGTCCTGTTTTTGGGTAGGTGACACGTGGACTCTAGTATGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCAGAACAAAATGAAAAGTaGGGTAGGCGGAAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSEQNEK*GRRKWP
Trigger: GGGCCACTTCCGCCTACCCCACTTTTCATTTTGTTC...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000381465.2
3UTR CAA 72 bp GTGCGATGCCAGGATGTGTGTTTGAGGCAGAGAGTTTaGATTCTGTCAGGATCTGCAACTATTTTGGAACAA +
Preference number: 4 (lower is better)
Translates to: VRCQDVCLRQRV*ILSGSATILEQ
Trigger: TTGTTCCAAAATAGTTGCAGATCCTGACAGAATCAAAACTCTCTGCCTCAAACACACATCCTGGCATCGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.8
ENST00000381465.2
CDS-3UTR GCA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTAAGAGTGTGTCTTTCTTaGTACTCAGCCAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: GFCPNQRALQALKGSFSVRVCLS*YSARQF
Trigger: GAATTGCCTGGCTGAGTAGCAAGAAAGACACACTCT...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATGGTCAGTCAGCTCCTTaGAGGTTTTCCTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNGQSAP*RFSCSE
Trigger: TTCAGAGCAGGAAAACCTTCAAGGAGCTGACTGACC...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAACTTAGCACCATATGCTaGATTCGAGACGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKLSTIC*IRDAKI
Trigger: GATTTTAGCGTCTCGAATTCAGCATATGGTGCTAAG...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAAAGAAATGAGTTGAAGTaGGCGATTAAGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: IRLQELAKISGHCYHLSKRNELK*AIKRHK
Trigger: TTTGTGTCTCTTAATCGCTCACTTCAACTCATTTCT...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCAAAGGTTTTCCTGCTCTaGACCAAGAAACTTAAGAGT +
Preference number: 4 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSKVFLL*TKKLKS
Trigger: ACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCTT...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATATGCATCTGGACGTTTaGCTTCTAATAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNMHLDV*LLIASC
Trigger: GCAGGAAGCTATTAGAAGTCAAACGTCCAGATGCAT...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR GCA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCAACATGTGGGACAACCTaGTTTGTTTCACTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSTCGTT*FVSLVS
Trigger: AGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGT...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR TCA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATTCAAATCCGAACAAGTaGGGTACTGGGAACACAAAT +
Preference number: 4 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNSNPNK*GTGNTN
Trigger: ATTTGTGTTCCCAGTACCTCACTTGTTCGGATTTGA...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CCA 90 bp AGCACAGATTCAAGTAACATTTACATACTAGAGTCCACGTGTCACCTACCCAAATACAAAGGTGCGTATTaGGATAGAGAGCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: STDSSNIYILESTCHLPKYKGAY*DRELFL
Trigger: TAAAAACAGCTCTCTATCCCAATACGCACCTTTGTA...TTTGGGTAGGTGACACGTGGACTCTAGTATGTAAATGTTACTTGAATCTGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS GCA 90 bp GTCTCCGATTTCGCCGGCACGAGCTTGCGGGGGTCCTGCGGGCGCTaGAAGGGGAGCTGCGTCCCTGGCCCTTCCAACGCGCGGCGTTCC +
Preference number: 5 (lower is better)
Translates to: VSDFAGTSLRGSCGR*KGSCVPGPSNARRS
Trigger: GGAACGCCGCGCGTTGGAAGGGCCAGGGACGCAGCTCCCCTTGCAGCGCCCGCAGGACCCCCGCAAGCTCGTGCCGGCGAAATCGGAGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS CCA 90 bp ACAGAGTTGCGGCGCGGGCTGGGCGCAGGTACCGCGACAAAGCCCTaGGCTCGGCCCGCCGCGCGGAGGTCAGCACAGGCTCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: TELRRGLGAGTATKP*ARPAARRSAQAHAV
Trigger: GACAGCATGAGCCTGTGCTGACCTCCGCGCGGCGGGCCGAGCCCAGGGCTTTGTCGCGGTACCTGCGCCCAGCCCGCGCCGCAACTCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 90 bp AAAGCCCTGGGCTCGGCCCGCCGCGCGGAGGTCAGCACAGGCTCATaGTGTCGCCGCTCGCTCGCGCCCCAGGTCTTCCTCCGAATGCAG +
Preference number: 5 (lower is better)
Translates to: KALGSARRAEVSTGS*CRRSLAPQVFLRMQ
Trigger: CTGCATTCGGAGGAAGACCTGGGGCGCGAGCGAGCGGCGACAGCATGAGCCTGTGCTGACCTCCGCGCGGCGGGCCGAGCCCAGGGCTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 90 bp CCGGCGTGGATCTGGATGAGTACCCGGGCTGCTAAGGTGCGGAGCTaGAGCGCCAGGGCTCCCGACGCGACCCCCAGGCCGGCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: PAWIWMSTRAAKVRS*SARAPDATPRPASE
Trigger: TTCGGAAGCCGGCCTGGGGGTCGCGTCGGGAGCCCTGGCGCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS GCA 90 bp CGGCTTCCGAATCGCAGACGGGGCGGAGGAGCCCGCGGTAGTTTGTaGAGTCTTCGGGGAGCTCACGGCGGCGACTCAGTCCCAACGCGT +
Preference number: 5 (lower is better)
Translates to: RLPNRRRGGGARGSL*SLRGAHGGDSVPTR
Trigger: ACGCGTTGGGACTGAGTCGCCGCCGTGAGCTCCCCGAAGACTGCACAAACTACCGCGGGCTCCTCCGCCCCGTCTGCGATTCGGAAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS GCA 90 bp GAAAGAGTTAGAAGCCCCCAAATGGGCGCCGCCGGATACCTCGTCTaGTCCGAGCCCGGCTCCCGGGGGTCCTCGGTCGGCAGGCAACTC +
Preference number: 5 (lower is better)
Translates to: ERVRSPQMGAAGYLV*SEPGSRGSSVGRQL
Trigger: GAGTTGCCTGCCGACCGAGGACCCCCGGGAGCCGGGCTCGGAGCAGACGAGGTATCCGGCGGCGCCCATTTGGGGGCTTCTAACTCTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 90 bp TCCCTGGCCCTTCCAACGCGCGGCGTTCCTTTGCCCCTTTCCCGCTaGAGAACTGGATCTCGTCGTGGCCGGGGATCTCGGAGCGAGCGG +
Preference number: 5 (lower is better)
Translates to: SLALPTRGVPLPLSR*RTGSRRGRGSRSER
Trigger: CCGCTCGCTCCGAGATCCCCGGCCACGACGAGATCCAGTTCTCCAGCGGGAAAGGGGCAAAGGAACGCCGCGCGTTGGAAGGGCCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483034.1
CDS GCA 90 bp GCCGCTCGCTCGCGCCCCAGGTCTTCCTCCGAATGCAGCCAGACGTaGAGGAGAGAACGAGGACAGATCGGCGGTCTCCGATTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: AARSRPRSSSECSQT*RRERGQIGGLRFRR
Trigger: CCGGCGAAATCGGAGACCGCCGATCTGTCCTCGTTCTCTCCTGCACGTCTGGCTGCATTCGGAGGAAGACCTGGGGCGCGAGCGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 90 bp CAAGGGGAGCTGCGTCCCTGGCCCTTCCAACGCGCGGCGTTCCTTTaGCCCTTTCCCGCTGGAGAACTGGATCTCGTCGTGGCCGGGGAT +
Preference number: 5 (lower is better)
Translates to: QGELRPWPFQRAAFL*PFPAGELDLVVAGD
Trigger: ATCCCCGGCCACGACGAGATCCAGTTCTCCAGCGGGAAAGGGGCAAAGGAACGCCGCGCGTTGGAAGGGCCAGGGACGCAGCTCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483034.1
CDS GCA 90 bp GCTCATGCTGTCGCCGCTCGCTCGCGCCCCAGGTCTTCCTCCGAATaGAGCCAGACGTGCAGGAGAGAACGAGGACAGATCGGCGGTCTC +
Preference number: 5 (lower is better)
Translates to: AHAVAARSRPRSSSE*SQTCRRERGQIGGL
Trigger: GAGACCGCCGATCTGTCCTCGTTCTCTCCTGCACGTCTGGCTGCATTCGGAGGAAGACCTGGGGCGCGAGCGAGCGGCGACAGCATGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS CCA 90 bp GGAGTCTCGGGCGGGCTCGGGGAGCCGAGGTTCGGGCTGAAACTCTaGCTGGGCTCCGCGGACCTTATAGACGACAACTCTTCGAAATCC +
Preference number: 5 (lower is better)
Translates to: GVSGGLGEPRFGLKL*LGSADLIDDNSSKS
Trigger: GGATTTCGAAGAGTTGTCGTCTATAAGGTCCGCGGAGCCCAGCCAGAGTTTCAGCCCGAACCTCGGCTCCCCGAGCCCGCCCGAGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS-3UTR CAA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCTGGCCACGCCGGATCTaGCTGAAGAGGGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSWPRRI*LKRELG
Trigger: ACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCA...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS CCA 90 bp CGCCGCACTTTTAGTTACTCTGTGTGTGTGTCCCCGGCGTGGATCTaGATGAGTACCCGGGCTGCTAAGGTGCGGAGCTGCAGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RRTFSYSVCVSPAWI*MSTRAAKVRSCSAR
Trigger: CCTGGCGCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAACTAAAAGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS TCA 90 bp GCACTTTTAGTTACTCTGTGTGTGTGTCCCCGGCGTGGATCTGGATaGGTACCCGGGCTGCTAAGGTGCGGAGCTGCAGCGCCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ALLVTLCVCPRRGSG*VPGLLRCGAAAPGL
Trigger: GAGCCCTGGCGCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAACTAAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS-3UTR CAA 90 bp AGCCAGGCAATTCGTGTCCCCCGGAAGAACTCCTTTCCGCTGCCCTCGCTCACTCTTCGGATGAGGCACTaGGCCTTGGGCGACAGAGTC +
Preference number: 5 (lower is better)
Translates to: SQAIRVPRKNSFPLPSLTLRMRH*ALGDRV
Trigger: GACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAG...AGTGAGCGAGGGCAGCGGAAAGGAGTTCTTCCGGGGGACACGAATTGCCTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp GGGGTGGTCTCCCAGGCTATGTTAGGGAAGACAAGCTCCAGCGGGCTCCCATCCTCCTCTCTCAGCTTCTaGCAGGTGCGGACGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GVVSQAMLGKTSSSGLPSSSLSF*QVRTKE
Trigger: TTCCTTCGTCCGCACCTGCAAGAAGCTGAGAGAGGA...GGATGGGAGCCCGCTGGAGCTTGTCTTCCCTAACATAGCCTGGGAGACCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS CCA 90 bp TCCCTGGCCCTTCCAACGCGCGGCGTTCCTTTGCCCCTTTCCCGCTaGAGAACTGGATCTCGTCCTGGAATAATTTGCAATCACCCCGTC +
Preference number: 5 (lower is better)
Translates to: SLALPTRGVPLPLSR*RTGSRPGIICNHPV
Trigger: GACGGGGTGATTGCAAATTATTCCAGGACGAGATCCAGTTCTCCAGCGGGAAAGGGGCAAAGGAACGCCGCGCGTTGGAAGGGCCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 90 bp TTTAACTTGGTGCGGTCAGCGCTGCCAACAAAAGATTGCAAAAGCTaGGCACAGAGTTGCGGCGCGGGCTGGGCGCAGGTACCGCGACAA +
Preference number: 5 (lower is better)
Translates to: FNLVRSALPTKDCKS*AQSCGAGWAQVPRQ
Trigger: TTGTCGCGGTACCTGCGCCCAGCCCGCGCCGCAACTCTGTGCCCAGCTTTTGCAATCTTTTGTTGGCAGCGCTGACCGCACCAAGTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS CCA 90 bp CAGAATCGCCGCACTTTTAGTTACTCTGTGTGTGTGTCCCCGGCGTaGATCTGGATGAGTACCCGGGCTGCTAAGGTGCGGAGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QNRRTFSYSVCVSPA*IWMSTRAAKVRSCS
Trigger: GCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAACTAAAAGTGCGGCGATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS-3UTR CAA 90 bp CACGCCTCTTGCCCCCATGCTACGTGGTCAGTCAGCTCCTTGAAGGTTTTCCTGGCCGGGCAGCCATGCTaGTCGGAGAGGGAATCATCA +
Preference number: 5 (lower is better)
Translates to: HASCPHATWSVSSLKVFLAGQPC*SERESS
Trigger: TGATGATTCCCTCTCCGACAAGCATGGCTGCCCGGC...CAGGAAAACCTTCAAGGAGCTGACTGACCACGTAGCATGGGGGCAAGAGGCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCAAATCCATGGCCGCCTaGTCTCCTGGTTACGAAGGG +
Preference number: 5 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPKSMAA*SPGYEG
Trigger: CCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTT...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS TCA 90 bp AGAAAACCAAGGATGGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTaGGGGCTCCCGACGCAGAATGCTTCGGATGAGGCACTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: RKPRMVQNFLRGQPL*GLPTQNASDEALGL
Trigger: AAGGCCAAGTGCCTCATCCGAAGCATTCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 90 bp CAGAATGCTTCGGATGAGGCACTTGGCCTTGGGCGACAGAGTCTCTaGAATGTTGAACTGGCCACGCCGGATCTTGCTGAAGAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: QNASDEALGLGRQSL*NVELATPDLAEEGA
Trigger: AGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAGCATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 90 bp ATGAGGCACTTGGCCTTGGGCGACAGAGTCTCTGGAATGTTGAACTaGCCACGCCGGATCTTGCTGAAGAGGGAGCTGGGTTCAATGTCA +
Preference number: 5 (lower is better)
Translates to: MRHLALGDRVSGMLN*PRRILLKRELGSMS
Trigger: TGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS-3UTR CAA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTCAGACTCCAGGAGCTaGCTAAAATCTCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPSDSRS*LKSQAI
Trigger: AATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGA...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS TCA 90 bp GCTGCCCTCGCTCACTCCTGGAACCTGCTAAGTCTCCGTGGGGCATaGGCTCAGTTAAAGAAAGGGTCCAAGTTCTCTTCCATGTTGACG +
Preference number: 5 (lower is better)
Translates to: AALAHSWNLLSLRGA*AQLKKGSKFSSMLT
Trigger: CGTCAACATGGAAGAGAACTTGGACCCTTTCTTTAACTGAGCTCATGCCCCACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS GCA 90 bp TCCAGAGGTTCCAACAATAAGTATTTCCCGATACAAGAAACGCAATaGGACAAGTTCGGAGTCTCGGGCGGGCTCGGGGAGCCGAGGTTC +
Preference number: 5 (lower is better)
Translates to: SRGSNNKYFPIQETQ*DKFGVSGGLGEPRF
Trigger: GAACCTCGGCTCCCCGAGCCCGCCCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGTATCGGGAAATACTTATTGTTGGAACCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS GCA 90 bp GAGACGCTAAAATCTGTAGAAAACCAAGGATGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGAGGGCTCCCGACGCAGAATGCTTCGG +
Preference number: 5 (lower is better)
Translates to: ETLKSVENQGWSRIS*EVSRSEGSRRRMLR
Trigger: CCGAAGCATTCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 90 bp CCTTTCCGCTGCCCTCGCTCACTCCTGGAACCTGCTAAGTCTCCGTaGGGCATGAGCTCAGTTAAAGAAAGGGTCCAAGTTCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: PFRCPRSLLEPAKSP*GMSSVKERVQVLFH
Trigger: ATGGAAGAGAACTTGGACCCTTTCTTTAACTGAGCTCATGCCCCACGGAGACTTAGCAGGTTCCAGGAGTGAGCGAGGGCAGCGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS GCA 90 bp CTGATATCAAACACCTTGCACACCAGCTCCTCTCCGCTGTGCAGATaGACGGCACGAAAAACGTGGTCTCCCTCCAGAGGTTCCAACAAT +
Preference number: 5 (lower is better)
Translates to: LISNTLHTSSSPLCR*TARKTWSPSRGSNN
Trigger: ATTGTTGGAACCTCTGGAGGGAGACCACGTTTTTCGTGCCGTGCATCTGCACAGCGGAGAGGAGCTGGTGTGCAAGGTGTTTGATATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CCA 90 bp TGGCTGGGCTCCGCGGACCTTATAGACGACAACTCTTCGAAATCCTaGGTTTTGTTCCGCGATCTCCCATATCTCGCTATTGTGATGGGG +
Preference number: 5 (lower is better)
Translates to: WLGSADLIDDNSSKS*VLFRDLPYLAIVMG
Trigger: CCCCATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGTTGTCGTCTATAAGGTCCGCGGAGCCCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CCA 90 bp CACACCAGCTCCTCTCCGCTGTGCAGATGCACGGCACGAAAAACGTaGTCTCCCTCCAGAGGTTCCAACAATAAGTATTTCCCGATACAA +
Preference number: 5 (lower is better)
Translates to: HTSSSPLCRCTARKT*SPSRGSNNKYFPIQ
Trigger: TTGTATCGGGAAATACTTATTGTTGGAACCTCTGGAGGGAGACCACGTTTTTCGTGCCGTGCATCTGCACAGCGGAGAGGAGCTGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS-3UTR CAA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCATGAATTTCCGCAGCTaGAGGTCCCGCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: EYCKSIRLQELAKISGHCMNFRS*RSRSTS
Trigger: GCTGGTGCTGCGGGACCTCAAGCTGCGGAAATTCAT...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS GCA 90 bp AGTGATTTGGTTGATGTTACTATGAGCAGACAGGCAAAAGCACGGTaGCAGGGATTCCTGGTAGCAGCTGATATCAAACACGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SDLVDVTMSRQAKAR*QGFLVAADIKHVAG
Trigger: CCCGGCCACGTGTTTGATATCAGCTGCTACCAGGAATCCCTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS CCA 90 bp CCATATGCTGAATTCGAGACGCTAAAATCTGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTGAGGGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: PYAEFETLKSVENQG*SRISCEVSRSEGSR
Trigger: TCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTCAGCATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS-3UTR CAA 90 bp CAAGGGCAAATCCATGGCCGCCTTGTCTCCTGGTTACGAAGGGTGAAGCCGCCCTTACCAGCTAGGTGGTaGGCTTGTTTAAAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: QGQIHGRLVSWLRRVKPPLPARW*ACLKEK
Trigger: TTTTTCTTTTAAACAAGCCAACCACCTAGCTGGTAA...GGGCGGCTTCACCCTTCGTAACCAGGAGACAAGGCGGCCATGGATTTGCCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS TCA 90 bp GACGTCCGGCACCAGCTGGTCAGACACTTCCTTAGCACCATATGCTaGATTCGAGACGCTAAAATCTGTAGAAAACCAAGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: DVRHQLVRHFLSTIC*IRDAKICRKPRMVQ
Trigger: CTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTCAGCATATGGTGCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 90 bp AAGAAAGGGTCCAAGTTCTCTTCCATGTTGACGTCCGGCACCAGCTaGTCAGACACTTCCTTAGCACCATATGCTGAATTCGAGACGCTA +
Preference number: 5 (lower is better)
Translates to: KKGSKFSSMLTSGTS*SDTSLAPYAEFETL
Trigger: TAGCGTCTCGAATTCAGCATATGGTGCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTTGGACCCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS-3UTR CAA 90 bp GGTTTTTGTCCAAACCAGAGGGCCTTACAAGCCTTAAAAGGATCATTCTCTGTAATGAGGCACTTGGCCTaGGGCGACAGAGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GFCPNQRALQALKGSFSVMRHLA*GDRVSG
Trigger: TCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCAT...TACAGAGAATGATCCTTTTAAGGCTTGTAAGGCCCTCTGGTTTGGACAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS GCA 90 bp AGTGATTTGGTTGATGTTACTATGAGCAGACAGGCAAAAGCACGGTaGCAGGGATTCCTGGTAGCAGCTGATATCAAACACCTTGCACAC +
Preference number: 5 (lower is better)
Translates to: SDLVDVTMSRQAKAR*QGFLVAADIKHLAH
Trigger: GTGTGCAAGGTGTTTGATATCAGCTGCTACCAGGAATCCCTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS-3UTR CAA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCATCCAGGCTTTCCAGCTaGACCCGAGTCCTCTCTTCG +
Preference number: 5 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSSRLSS*TRVLSS
Trigger: CGAAGAGAGGACTCGGGTCAAGCTGGAAAGCCTGGA...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp GAGTACTGCAAAAGCATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCAATGCATCTGGACGTTaGACTTCTAATAGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: EYCKSIRLQELAKISGHCNASGR*TSNSFL
Trigger: CAGGAAGCTATTAGAAGTCAAACGTCCAGATGCATT...GCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGATGCTTTTGCAGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp TGCCCTGTATTTTATACATGTGGGACAACCTGCTTTGTTTCACTAGTTTCTAATAAGTTCTCTTCCATGTaGACGTCCGGCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CPVFYTCGTTCFVSLVSNKFSSM*TSGTSW
Trigger: CCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTT...ATTAGAAACTAGTGAAACAAAGCAGGTTGTCCCACATGTATAAAATACAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp ATCAGACTCCAGGAGCTTGCTAAAATCTCAGGCCATTGCTATCATCTCAGCAAATGCCAGGATGTGTGTTaGAGGCAGAGAGTTTTGATT +
Preference number: 5 (lower is better)
Translates to: IRLQELAKISGHCYHLSKCQDVC*RQRVLI
Trigger: AATCAAAACTCTCTGCCTCAAACACACATCCTGGCA...TTTGCTGAGATGATAGCAATGGCCTGAGATTTTAGCAAGCTCCTGGAGTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp CAAAGACAAATGTTTAGTTGCGATCAGAGTACTGCAAAAGCATCAGACTCCAGGCCTGCCACGAACCAATaGACACAAAACAGAATAGCT +
Preference number: 5 (lower is better)
Translates to: QRQMFSCDQSTAKASDSRPATNQ*TQNRIA
Trigger: AGCTATTCTGTTTTGTGTCAATTGGTTCGTGGCAGG...CCTGGAGTCTGATGCTTTTGCAGTACTCTGATCGCAACTAAACATTTGTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp AGGTTTTCCTGCTCTGAACCAAGAAACTTAAGAGTGTGTCTTTCTTGCTACTCATTGAGGCAGAGAGTTTaGATTCTGTCAGGATCTGCA +
Preference number: 5 (lower is better)
Translates to: RFSCSEPRNLRVCLSCYSLRQRV*ILSGSA
Trigger: TGCAGATCCTGACAGAATCAAAACTCTCTGCCTCAA...TGAGTAGCAAGAAAGACACACTCTTAAGTTTCTTGGTTCAGAGCAGGAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS-3UTR CAA 90 bp CCAAAAACAGGACCATTTCACAAAACATATACAGGCAGTCAAATCCGAACAAGTAATTATCCTTCCCGCTaGTCTCTACTGAGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: PKTGPFHKTYTGSQIRTSNYPSR*SLLRVF
Trigger: AAAAACCCTCAGTAGAGACAAGCGGGAAGGATAATT...ACTTGTTCGGATTTGACTGCCTGTATATGTTTTGTGAAATGGTCCTGTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS TCA 72 bp CTTACGTGGCCGGGGATCTCGGAGCGAGCGGGGCCGTaGGTGCGCGTGTGCGCGCGCGCGCCTCGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: LTWPGISERAGP*VRVCARAPRSR
Trigger: GCGCGAGCGAGGCGCGCGCGCGCACACGCGCACTCACGGCCCCGCTCGCTCCGAGATCCCCGGCCACGTAAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS TCA 72 bp AACACGTGGCCGGGGATCTCGGAGCGAGCGGGGCCGTaGGTGCGCGTGTGCGCGCGCGCGCCTCGCTCGCGC +
Preference number: 6 (lower is better)
Translates to: NTWPGISERAGP*VRVCARAPRSR
Trigger: GCGCGAGCGAGGCGCGCGCGCGCACACGCGCACTCACGGCCCCGCTCGCTCCGAGATCCCCGGCCACGTGTT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS GCA 72 bp TTCGCCGGCACGAGCTTGCGGGGGTCCTGCGGGCGCTaGAAGGGGAGCTGCGTCCCTGGCCCTTCCAACGCG +
Preference number: 6 (lower is better)
Translates to: FAGTSLRGSCGR*KGSCVPGPSNA
Trigger: CGCGTTGGAAGGGCCAGGGACGCAGCTCCCCTTGCAGCGCCCGCAGGACCCCCGCAAGCTCGTGCCGGCGAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 72 bp AGAAGCCCCCAAATGGGCGCCGCCGGATACCTCGTCTaGTCCGAGCCCGGCTCCCGGGGGTCCTCGGTCGGC +
Preference number: 6 (lower is better)
Translates to: RSPQMGAAGYLV*SEPGSRGSSVG
Trigger: GCCGACCGAGGACCCCCGGGAGCCGGGCTCGGAGCAGACGAGGTATCCGGCGGCGCCCATTTGGGGGCTTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS GCA 72 bp ATCTGGATGAGTACCCGGGCTGCTAAGGTGCGGAGCTaGAGCGCCAGGGCTCCCGACGCGACCCCCAGGCCG +
Preference number: 6 (lower is better)
Translates to: IWMSTRAAKVRS*SARAPDATPRP
Trigger: CGGCCTGGGGGTCGCGTCGGGAGCCCTGGCGCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CAA 90 bp GGCCGGCTTCCGAATCGCAGACGGGGCGGAGGAGCCCGCGGTAGTTaGTGCAGTCTTCGGGGAGCTCACGGCGGCGACTCAGTCCCAACG +
Preference number: 6 (lower is better)
Translates to: GRLPNRRRGGGARGS*CSLRGAHGGDSVPT
Trigger: CGTTGGGACTGAGTCGCCGCCGTGAGCTCCCCGAAGACTGCACAAACTACCGCGGGCTCCTCCGCCCCGTCTGCGATTCGGAAGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CAA 72 bp CCGAATCGCAGACGGGGCGGAGGAGCCCGCGGTAGTTaGTGCAGTCTTCGGGGAGCTCACGGCGGCGACTCA +
Preference number: 6 (lower is better)
Translates to: PNRRRGGGARGS*CSLRGAHGGDS
Trigger: TGAGTCGCCGCCGTGAGCTCCCCGAAGACTGCACAAACTACCGCGGGCTCCTCCGCCCCGTCTGCGATTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS GCA 72 bp AATCGCAGACGGGGCGGAGGAGCCCGCGGTAGTTTGTaGAGTCTTCGGGGAGCTCACGGCGGCGACTCAGTC +
Preference number: 6 (lower is better)
Translates to: NRRRGGGARGSL*SLRGAHGGDSV
Trigger: GACTGAGTCGCCGCCGTGAGCTCCCCGAAGACTGCACAAACTACCGCGGGCTCCTCCGCCCCGTCTGCGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 72 bp AGGGGCTGCGTGGAGAAAGAGTTAGAAGCCCCCAAATaGGCGCCGCCGGATACCTCGTCTGCTCCGAGCCCG +
Preference number: 6 (lower is better)
Translates to: RGCVEKELEAPK*APPDTSSAPSP
Trigger: CGGGCTCGGAGCAGACGAGGTATCCGGCGGCGCCCATTTGGGGGCTTCTAACTCTTTCTCCACGCAGCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 72 bp CTTCCAACGCGCGGCGTTCCTTTGCCCCTTTCCCGCTaGAGAACTGGATCTCGTCGTGGCCGGGGATCTCGG +
Preference number: 6 (lower is better)
Translates to: LPTRGVPLPLSR*RTGSRRGRGSR
Trigger: CCGAGATCCCCGGCCACGACGAGATCCAGTTCTCCAGCGGGAAAGGGGCAAAGGAACGCCGCGCGTTGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483034.1
CDS CAA 90 bp GCGGTCAGCGCTGCCAACAAAAGATTGCAAAAGCTGGGCACAGAGTaGCGGCGCGGGCTGGGCGCAGGTACCGCGACAAAGCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: AVSAANKRLQKLGTE*RRGLGAGTATKPWA
Trigger: AGCCCAGGGCTTTGTCGCGGTACCTGCGCCCAGCCCGCGCCGCAACTCTGTGCCCAGCTTTTGCAATCTTTTGTTGGCAGCGCTGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 72 bp TCGCGCCCCAGGTCTTCCTCCGAATGCAGCCAGACGTaGAGGAGAGAACGAGGACAGATCGGCGGTCTCCGA +
Preference number: 6 (lower is better)
Translates to: SRPRSSSECSQT*RRERGQIGGLR
Trigger: TCGGAGACCGCCGATCTGTCCTCGTTCTCTCCTGCACGTCTGGCTGCATTCGGAGGAAGACCTGGGGCGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS TCA 72 bp GTTACTCTGTGTGTGTGTCCCCGGCGTGGATCTGGATaGGTACCCGGGCTGCTAAGGTGCGGAGCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: VTLCVCPRRGSG*VPGLLRCGAAA
Trigger: CGCTGCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS TCA 72 bp AGGATGGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTaGGGGCTCCCGACGCAGAATGCTTCGGATGAGGCA +
Preference number: 6 (lower is better)
Translates to: RMVQNFLRGQPL*GLPTQNASDEA
Trigger: TGCCTCATCCGAAGCATTCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS TCA 72 bp GGCAAAAGCACGGTGCCAGGGATTCCTGGTAGCAGCTaGTATCAAACACGTGGCCGGGGATCTCGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: GKSTVPGIPGSS*YQTRGRGSRSE
Trigger: CTCGCTCCGAGATCCCCGGCCACGTGTTTGATATCAGCTGCTACCAGGAATCCCTGGCACCGTGCTTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381465.2
CDS GCA 72 bp AACACCTTGCACACCAGCTCCTCTCCGCTGTGCAGATaGACGGCACGAAAAACGTGGTCTCCCTCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: NTLHTSSSPLCR*TARKTWSPSRG
Trigger: ACCTCTGGAGGGAGACCACGTTTTTCGTGCCGTGCATCTGCACAGCGGAGAGGAGCTGGTGTGCAAGGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CCA 72 bp TTTAGTTACTCTGTGTGTGTGTCCCCGGCGTGGATCTaGATGAGTACCCGGGCTGCTAAGGTGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FSYSVCVSPAWI*MSTRAAKVRSC
Trigger: GCAGCTCCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAACTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 72 bp CGCACTTTTAGTTACTCTGTGTGTGTGTCCCCGGCGTaGATCTGGATGAGTACCCGGGCTGCTAAGGTGCGG +
Preference number: 6 (lower is better)
Translates to: RTFSYSVCVSPA*IWMSTRAAKVR
Trigger: CCGCACCTTAGCAGCCCGGGTACTCATCCAGATCCACGCCGGGGACACACACACAGAGTAACTAAAAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 72 bp TTGGCCTTGGGCGACAGAGTCTCTGGAATGTTGAACTaGCCACGCCGGATCTTGCTGAAGAGGGAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LALGDRVSGMLN*PRRILLKRELG
Trigger: ACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS GCA 72 bp TTTAACTTGGTGCGGTCAGCGCTGCCAACAAAAGATTaGAAAAGCTGGGCACAGAGTTGCGGCGCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: FNLVRSALPTKD*KSWAQSCGAGW
Trigger: CCAGCCCGCGCCGCAACTCTGTGCCCAGCTTTTGCAATCTTTTGTTGGCAGCGCTGACCGCACCAAGTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS CCA 72 bp TCGGATGAGGCACTTGGCCTTGGGCGACAGAGTCTCTaGAATGTTGAACTGGCCACGCCGGATCTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: SDEALGLGRQSL*NVELATPDLAE
Trigger: TTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CAA 72 bp TCCCGACGCAGAATGCTTCGGATGAGGCACTTGGCCTaGGGCGACAGAGTCTCTGGAATGTTGAACTGGCCA +
Preference number: 6 (lower is better)
Translates to: SRRRMLRMRHLA*GDRVSGMLNWP
Trigger: TGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAAGGCCAAGTGCCTCATCCGAAGCATTCTGCGTCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CAA 90 bp TTGGGCGACAGAGTCTCTGGAATGTTGAACTGGCCACGCCGGATCTaGCTGAAGAGGGAGCTGGGTTCAATGTCATGGAAAGGGTACCGC +
Preference number: 6 (lower is better)
Translates to: LGDRVSGMLNWPRRI*LKRELGSMSWKGYR
Trigger: GCGGTACCCTTTCCATGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCTGTCGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 72 bp CGGATCTTGCTGAAGAGGGAGCTGGGTTCAATGTCATaGAAAGGGTACCGCCCCACCAACATGGTGTACAGC +
Preference number: 6 (lower is better)
Translates to: RILLKRELGSMS*KGYRPTNMVYS
Trigger: GCTGTACACCATGTTGGTGGGGCGGTACCCTTTCCATGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS GCA 72 bp AAATCTGTAGAAAACCAAGGATGGTCCAGAATTTCCTaGGAGGTCAGCCGCTCTGAGGGCTCCCGACGCAGA +
Preference number: 6 (lower is better)
Translates to: KSVENQGWSRIS*EVSRSEGSRRR
Trigger: TCTGCGTCGGGAGCCCTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 72 bp CTTCCAACGCGCGGCGTTCCTTTGCCCCTTTCCCGCTaGAGAACTGGATCTCGTCCTGGAATAATTTGCAAT +
Preference number: 6 (lower is better)
Translates to: LPTRGVPLPLSR*RTGSRPGIICN
Trigger: ATTGCAAATTATTCCAGGACGAGATCCAGTTCTCCAGCGGGAAAGGGGCAAAGGAACGCCGCGCGTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000155926.9
CDS CCA 72 bp GCGGGAGAGGGCAGTTACCTACGTTTTAACTGTAGATaGCGTCTGAGGCTTTTCCAAGATCGCGAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: AGEGSYLRFNCR*RLRLFQDRELS
Trigger: GGAGAGCTCGCGATCTTGGAAAAGCCTCAGACGCCATCTACAGTTAAAACGTAGGTAACTGCCCTCTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000483034.1
CDS GCA 72 bp TCCAACAATAAGTATTTCCCGATACAAGAAACGCAATaGGACAAGTTCGGAGTCTCGGGCGGGCTCGGGGAG +
Preference number: 6 (lower is better)
Translates to: SNNKYFPIQETQ*DKFGVSGGLGE
Trigger: CTCCCCGAGCCCGCCCGAGACTCCGAACTTGTCGCATTGCGTTTCTTGTATCGGGAAATACTTATTGTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CAA 90 bp GGCTCCGCGGACCTTATAGACGACAACTCTTCGAAATCCTGGGTTTaGTTCCGCGATCTCCCATATCTCGCTATTGTGATGGGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: GSADLIDDNSSKSWV*FRDLPYLAIVMGVD
Trigger: GTCTACCCCCATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGTTGTCGTCTATAAGGTCCGCGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CCA 72 bp TCCTCTCCGCTGTGCAGATGCACGGCACGAAAAACGTaGTCTCCCTCCAGAGGTTCCAACAATAAGTATTTC +
Preference number: 6 (lower is better)
Translates to: SSPLCRCTARKT*SPSRGSNNKYF
Trigger: GAAATACTTATTGTTGGAACCTCTGGAGGGAGACCACGTTTTTCGTGCCGTGCATCTGCACAGCGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CAA 72 bp AGAGTCTCTGGAATGTTGAACTGGCCACGCCGGATCTaGCTGAAGAGGGAGCTGGGTTCAATGTCATGGAAA +
Preference number: 6 (lower is better)
Translates to: RVSGMLNWPRRI*LKRELGSMSWK
Trigger: TTTCCATGACATTGAACCCAGCTCCCTCTTCAGCAAGATCCGGCGTGGCCAGTTCAACATTCCAGAGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 72 bp TCCAAGTTCTCTTCCATGTTGACGTCCGGCACCAGCTaGTCAGACACTTCCTTAGCACCATATGCTGAATTC +
Preference number: 6 (lower is better)
Translates to: SKFSSMLTSGTS*SDTSLAPYAEF
Trigger: GAATTCAGCATATGGTGCTAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CAA 72 bp GCTCAGTTAAAGAAAGGGTCCAAGTTCTCTTCCATGTaGACGTCCGGCACCAGCTGGTCAGACACTTCCTTA +
Preference number: 6 (lower is better)
Translates to: AQLKKGSKFSSM*TSGTSWSDTSL
Trigger: TAAGGAAGTGTCTGACCAGCTGGTGCCGGACGTCAACATGGAAGAGAACTTGGACCCTTTCTTTAACTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CCA 72 bp TCCGCGGACCTTATAGACGACAACTCTTCGAAATCCTaGGTTTTGTTCCGCGATCTCCCATATCTCGCTATT +
Preference number: 6 (lower is better)
Translates to: SADLIDDNSSKS*VLFRDLPYLAI
Trigger: AATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGTTGTCGTCTATAAGGTCCGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CCA 72 bp GAATTCGAGACGCTAAAATCTGTAGAAAACCAAGGATaGTCCAGAATTTCCTGCGAGGTCAGCCGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: EFETLKSVENQG*SRISCEVSRSE
Trigger: CTCAGAGCGGCTGACCTCGCAGGAAATTCTGGACCATCCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS TCA 72 bp CACCAGCTGGTCAGACACTTCCTTAGCACCATATGCTaGATTCGAGACGCTAAAATCTGTAGAAAACCAAGG +
Preference number: 6 (lower is better)
Translates to: HQLVRHFLSTIC*IRDAKICRKPR
Trigger: CCTTGGTTTTCTACAGATTTTAGCGTCTCGAATTCAGCATATGGTGCTAAGGAAGTGTCTGACCAGCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000381465.2
CDS CAA 72 bp GACCTTATAGACGACAACTCTTCGAAATCCTGGGTTTaGTTCCGCGATCTCCCATATCTCGCTATTGTGATG +
Preference number: 6 (lower is better)
Translates to: DLIDDNSSKSWV*FRDLPYLAIVM
Trigger: CATCACAATAGCGAGATATGGGAGATCGCGGAACAAAACCCAGGATTTCGAAGAGTTGTCGTCTATAAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000155926.9
ENST00000405331.3
CDS CAA 90 bp AAAGAACACATAGGCTTTGGTCTCACCCAGGATAATTTCAGTGATTaGGTTGATGTTACTATGAGCAGACAGGCAAAAGCACGGTGCCAG +
Preference number: 6 (lower is better)
Translates to: KEHIGFGLTQDNFSD*VDVTMSRQAKARCQ
Trigger: CTGGCACCGTGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACTGAAATTATCCTGGGTGAGACCAAAGCCTATGTGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155926.9
ENST00000381465.2
ENST00000405331.3
CDS CAA 72 bp ATAGGCTTTGGTCTCACCCAGGATAATTTCAGTGATTaGGTTGATGTTACTATGAGCAGACAGGCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: IGFGLTQDNFSD*VDVTMSRQAKA
Trigger: TGCTTTTGCCTGTCTGCTCATAGTAACATCAACCAAATCACTGAAATTATCCTGGGTGAGACCAAAGCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000155926.9
ENST00000381465.2
ENST00000405331.3