Pregenerated sensors for TREX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183479Ensembl transcript IDs: ENST00000330912.7, ENST00000334497.7, ENST00000338525.7, ENST00000370212.5, ENST00000370231.3, ENST00000370232.4, ENST00000393862.7
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGAAGAGGCTGCCGAGGCTGTAACCCTGGCGGCCCCGGGCCCGGGTaGCGTGGCTGTGGGCGCGGTCCAGGCCCCGCAGGGCCGGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRGCRGCNPGGPGPG*RGCGRGPGPAGPAA Trigger: CGCTGCCGGCCCTGCGGGGCCTGGACCGCGCCCACAGCCACGGCACCCGGGCCCGGGGCCGCCAGGGTTACAGCCTCGGCAGCCTCTTCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | GCGAGCAGCTCTGCGGCGCGGTGCAGGAAGATCAGGAGCAGGGTGTaGACGTCGCCCTCGGCTGAGTGGGCTGCGCTTGGCTCTGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: ASSSAARCRKIRSRV*TSPSAEWAALGSAR Trigger: CCGGGCAGAGCCAAGCGCAGCCCACTCAGCCGAGGGCGACGTGCACACCCTGCTCCTGATCTTCCTGCACCGCGCCGCAGAGCTGCTCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | CCACGGGCCTGCTCATCGGCCCAGGCGAGCAGCTCTGCGGCGCGGTaGAGGAAGATCAGGAGCAGGGTGTGCACGTCGCCCTCGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PRACSSAQASSSAAR*RKIRSRVCTSPSAE Trigger: CTCAGCCGAGGGCGACGTGCACACCCTGCTCCTGATCTTCCTGCACCGCGCCGCAGAGCTGCTCGCCTGGGCCGATGAGCAGGCCCGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | GGGCACCCAGGCCAGCCGGGAGAGCACGGCCCTGGAAGCGGGGCCTaGAGAGGAATCCAGGGCCGTATGGCTGGTCAGGCAGCCAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GHPGQPGEHGPGSGA*RGIQGRMAGQAARE Trigger: TTCCCTGGCTGCCTGACCAGCCATACGGCCCTGGATTCCTCTCCAGGCCCCGCTTCCAGGGCCGTGCTCTCCCGGCTGGCCTGGGTGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | TCAGGCGGCAAGTACATGGGCTCGATGTGGGCCCACCCACGGGCCTaGTCATCGGCCCAGGCGAGCAGCTCTGCGGCGCGGTGCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SGGKYMGSMWAHPRA*SSAQASSSAARCRK Trigger: CTTCCTGCACCGCGCCGCAGAGCTGCTCGCCTGGGCCGATGAGCAGGCCCGTGGGTGGGCCCACATCGAGCCCATGTACTTGCCGCCTGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | TGGGCCACAAGGCAGATGGGCCCTGCCTGGCGGCTCAGGAAGGCCTaGAGCGTCCGCACCACGGCGCCATCAAAGCCAGCCTTCCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: WATRQMGPAWRLRKA*SVRTTAPSKPAFRH Trigger: ATGCCGGAAGGCTGGCTTTGATGGCGCCGTGGTGCGGACGCTGCAGGCCTTCCTGAGCCGCCAGGCAGGGCCCATCTGCCTTGTGGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | GCCTCCAGGCTGGGGTCATCAGGCGGCAAGTACATGGGCTCGATGTaGGCCCACCCACGGGCCTGCTCATCGGCCCAGGCGAGCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ASRLGSSGGKYMGSM*AHPRACSSAQASSS Trigger: AGAGCTGCTCGCCTGGGCCGATGAGCAGGCCCGTGGGTGGGCCCACATCGAGCCCATGTACTTGCCGCCTGATGACCCCAGCCTGGAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | ACTGACCGGCTTCCTGGGCTTCTGGGCACCTGTCGCCACACAGGCTaGTCTAGGCGGCCTTTAATCAGCGGCCGCAGCCCGCCCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TDRLPGLLGTCRHTG*SRRPLISGRSPPPA Trigger: AGCTGGGGGCGGGCTGCGGCCGCTGATTAAAGGCCGCCTAGAGCAGCCTGTGTGGCGACAGGTGCCCAGAAGCCCAGGAAGCCGGTCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330912.7 ENST00000338525.7 |
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| CDS CCA 90 bp | AGCAAACTCTGCTGGGCACCCAGGCCAGCCGGGAGAGCACGGCCCTaGAAGCGGGGCCTGGAGAGGAATCCAGGGCCGTATGGCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SKLCWAPRPAGRARP*KRGLERNPGPYGWS Trigger: TGACCAGCCATACGGCCCTGGATTCCTCTCCAGGCCCCGCTTCCAGGGCCGTGCTCTCCCGGCTGGCCTGGGTGCCCAGCAGAGTTTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | ATAGGAGGAGCCGGGGGTGGTAGAGGCCAGCTGAACGGTGGAGGCTaGCACTGTCCATGGCACAGGAGGTGGCCCTGGTGCTCAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: IGGAGGGRGQLNGGG*HCPWHRRWPWCSGL Trigger: GAGGCCTGAGCACCAGGGCCACCTCCTGTGCCATGGACAGTGCCAGCCTCCACCGTTCAGCTGGCCTCTACCACCCCCGGCTCCTCCTAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | AGAGGGACAGCTCGGCAATCTCGGGCTCCACACTGGGGAGCCCAGTaGCTTCCAGGTCCAGGAAGACAAAGGTCTCGGCCCGGGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: RGTARQSRAPHWGAQ*LPGPGRQRSRPGVP Trigger: AGGCACCCCGGGCCGAGACCTTTGTCTTCCTGGACCTGGAAGCCACTGGGCTCCCCAGTGTGGAGCCCGAGATTGCCGAGCTGTCCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | AGGGCACCAGACTCGTCGTGCTCCGGGTTCTCCAGGGAGGAGCGGTaGACAGCAAAGAGGGACAGCTCGGCAATCTCGGGCTCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: RAPDSSCSGFSREER*TAKRDSSAISGSTL Trigger: CAGTGTGGAGCCCGAGATTGCCGAGCTGTCCCTCTTTGCTGTCCACCGCTCCTCCCTGGAGAACCCGGAGCACGACGAGTCTGGTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | AGCTTGTCCAGGACCCGGGGCAATACTAGGGCACCAGACTCGTCGTaGTCCGGGTTCTCCAGGGAGGAGCGGTGGACAGCAAAGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: SLSRTRGNTRAPDSS*SGFSREERWTAKRD Trigger: GTCCCTCTTTGCTGTCCACCGCTCCTCCCTGGAGAACCCGGAGCACGACGAGTCTGGTGCCCTAGTATTGCCCCGGGTCCTGGACAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS TCA 90 bp | ACTTGGCAGAGGCACTGGCCCACTGCCAGTCATCACTCTGCTTGTTaGGGAGGGGCTGCATGTCCAGGGGCCACGGGTCGCACTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: TWQRHWPTASHHSAC*GGAACPGATGRTLD Trigger: ATCCAGAGTGCGACCCGTGGCCCCTGGACATGCAGCCCCTCCTCAACAAGCAGAGTGATGACTGGCAGTGGGCCAGTGCCTCTGCCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 90 bp | GGTGGACAGCAAAGAGGGACAGCTCGGCAATCTCGGGCTCCACACTaGGGAGCCCAGTGGCTTCCAGGTCCAGGAAGACAAAGGTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: GGQQRGTARQSRAPH*GAQWLPGPGRQRSR Trigger: CCGAGACCTTTGTCTTCCTGGACCTGGAAGCCACTGGGCTCCCCAGTGTGGAGCCCGAGATTGCCGAGCTGTCCCTCTTTGCTGTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 90 bp | GCAGGGGGAAATCATAATCAAAGCCATTGTGGGCCACAAGGCAGATaGGCCCTGCCTGGCGGCTCAGGAAGGCCTGCAGCGTCCGCACCA | + |
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Preference number: 5 (lower is better) Translates to: AGGNHNQSHCGPQGR*ALPGGSGRPAASAP Trigger: TGGTGCGGACGCTGCAGGCCTTCCTGAGCCGCCAGGCAGGGCCCATCTGCCTTGTGGCCCACAATGGCTTTGATTATGATTTCCCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS TCA 90 bp | GGTCCAGGAAGACAAAGGTCTCGGCCCGGGGTGCCTCGGACATGGTaGTGTTCCCACGGGGATAGCAAGTCCTCAAACTGTCCGAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: GPGRQRSRPGVPRTW*CSHGDSKSSNCPSE Trigger: CTCGCTCGGACAGTTTGAGGACTTGCTATCCCCGTGGGAACATCACCATGTCCGAGGCACCCCGGGCCGAGACCTTTGTCTTCCTGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338525.7 ENST00000370231.3 |
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| CDS GCA 90 bp | CTCATGACGGAGCTGCTGCCACCCCAGCAGATCTGCTCGCCTTGCTaGTTCTTCACGGTCTCCACGGCCTTCGCAGAGGTGTCAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: LMTELLPPQQICSPC*FFTVSTAFAEVSAT Trigger: AGTTGCTGACACCTCTGCGAAGGCCGTGGAGACCGTGAAGAAGCAGCAAGGCGAGCAGATCTGCTGGGGTGGCAGCAGCTCCGTCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS GCA 90 bp | CCCAGTGGCTTCCAGGTCCAGGAAGACAAAGGTCTCGGCCCGGGGTaGCTCGGACATGGTGATGTTCCCACGGGGATAGCAAGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PSGFQVQEDKGLGPG*LGHGDVPTGIASPQ Trigger: TTGAGGACTTGCTATCCCCGTGGGAACATCACCATGTCCGAGGCACCCCGGGCCGAGACCTTTGTCTTCCTGGACCTGGAAGCCACTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 90 bp | TTGGTAGCTAGACTCATGACGGAGCTGCTGCCACCCCAGCAGATCTaGTCGCCTTGCTGCTTCTTCACGGTCTCCACGGCCTTCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LVARLMTELLPPQQI*SPCCFFTVSTAFAE Trigger: CTCTGCGAAGGCCGTGGAGACCGTGAAGAAGCAGCAAGGCGAGCAGATCTGCTGGGGTGGCAGCAGCTCCGTCATGAGTCTAGCTACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 90 bp | GGTCCAGGAAGACAAAGGTCTCGGCCCGGGGTGCCTCGGACATGGTaGTGTTCCCACGGGGATAGCAAGTCCTCAAACTGTGACCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: GPGRQRSRPGVPRTW*CSHGDSKSSNCDLW Trigger: CCAAAGGTCACAGTTTGAGGACTTGCTATCCCCGTGGGAACATCACCATGTCCGAGGCACCCCGGGCCGAGACCTTTGTCTTCCTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393862.7 |
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| CDS GCA 90 bp | GTCAGGCTCCGGATGGTATCGAGCAACTGGTCCATGAAGTGTAGCTaGTTCTGGGCGCAGGCACAGCCCTTGAGGAGCTCCTGGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: VRLRMVSSNWSMKCS*FWAQAQPLRSSWSS Trigger: AGATGACCAGGAGCTCCTCAAGGGCTGTGCCTGCGCCCAGAAGCAGCTACACTTCATGGACCAGTTGCTCGATACCATCCGGAGCCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS GCA 90 bp | CTGCTTCTTCACGGTCTCCACGGCCTTCGCAGAGGTGTCAGCAACTaGCATGACCACTTGCAGCAGTTGGCTGTAGGAAGTCAGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: LLLHGLHGLRRGVSN*HDHLQQLAVGSQIL Trigger: CAGAATCTGACTTCCTACAGCCAACTGCTGCAAGTGGTCATGGCAGTTGCTGACACCTCTGCGAAGGCCGTGGAGACCGTGAAGAAGCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 90 bp | TCATTTCTTGGATCTTCACCTCTGTTGGGACCCCTTTCAGTGAGCTaGACCTGTCCTGCAGTGAGGGCCAGACCCGGGTACACATCCACT | + |
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Preference number: 5 (lower is better) Translates to: SFLGSSPLLGPLSVS*TCPAVRARPGYTST Trigger: AGTGGATGTGTACCCGGGTCTGGCCCTCACTGCAGGACAGGTTCAGCTCACTGAAAGGGGTCCCAACAGAGGTGAAGATCCAAGAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 90 bp | TCTAGGATCTCCAAGCGGTACTCTGAGGGGCTGCACAGCAGTTCCTaGATTGTCTTTGGCTCTGTGATATACAGACCCTCGAGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SRISKRYSEGLHSSS*IVFGSVIYRPSRKG Trigger: CCCCTTCCTCGAGGGTCTGTATATCACAGAGCCAAAGACAATTCAGGAACTGCTGTGCAGCCCCTCAGAGTACCGCTTGGAGATCCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 90 bp | ACTCTGAGGGGCTGCACAGCAGTTCCTGAATTGTCTTTGGCTCTGTaGTATACAGACCCTCGAGGAAGGGGCAGTTTAGGTCCTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TLRGCTAVPELSLAL*YTDPRGRGSLGPSA Trigger: AGCTGAAGGACCTAAACTGCCCCTTCCTCGAGGGTCTGTATATCACAGAGCCAAAGACAATTCAGGAACTGCTGTGCAGCCCCTCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS GCA 72 bp | CGCTTGGCTCTGCCCGGAAGTAGCGGTGGAAGAGGCTaGCGAGGCTGTAACCCTGGCGGCCCCGGGCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RLALPGSSGGRG*RGCNPGGPGPG Trigger: CCCGGGCCCGGGGCCGCCAGGGTTACAGCCTCGGCAGCCTCTTCCACCGCTACTTCCGGGCAGAGCCAAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 72 bp | TTCTGGTGCGTGGCCTGGATGATGGGGCCGCACGGGTaGAGGTCAGGGCCTGGGCGCTGGCAGCACTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: FWCVAWMMGPHG*RSGPGRWQHSP Trigger: GGGCGAGTGCTGCCAGCGCCCAGGCCCTGACCTCCACCCGTGCGGCCCCATCATCCAGGCCACGCACCAGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS GCA 72 bp | AGGCAGATGGGCCCTGCCTGGCGGCTCAGGAAGGCCTaGAGCGTCCGCACCACGGCGCCATCAAAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RQMGPAWRLRKA*SVRTTAPSKPA Trigger: GGCTGGCTTTGATGGCGCCGTGGTGCGGACGCTGCAGGCCTTCCTGAGCCGCCAGGCAGGGCCCATCTGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 72 bp | AAGTACATGGGCTCGATGTGGGCCCACCCACGGGCCTaGTCATCGGCCCAGGCGAGCAGCTCTGCGGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: KYMGSMWAHPRA*SSAQASSSAAR Trigger: CCGCGCCGCAGAGCTGCTCGCCTGGGCCGATGAGCAGGCCCGTGGGTGGGCCCACATCGAGCCCATGTACTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 72 bp | GGCCAGCCGGGAGAGCACGGCCCTGGAAGCGGGGCCTaGAGAGGAATCCAGGGCCGTATGGCTGGTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GQPGEHGPGSGA*RGIQGRMAGQA Trigger: TGCCTGACCAGCCATACGGCCCTGGATTCCTCTCCAGGCCCCGCTTCCAGGGCCGTGCTCTCCCGGCTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS GCA 72 bp | TCTGCGGCGCGGTGCAGGAAGATCAGGAGCAGGGTGTaGACGTCGCCCTCGGCTGAGTGGGCTGCGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SAARCRKIRSRV*TSPSAEWAALG Trigger: GCCAAGCGCAGCCCACTCAGCCGAGGGCGACGTGCACACCCTGCTCCTGATCTTCCTGCACCGCGCCGCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 72 bp | CTGGGGTCATCAGGCGGCAAGTACATGGGCTCGATGTaGGCCCACCCACGGGCCTGCTCATCGGCCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LGSSGGKYMGSM*AHPRACSSAQA Trigger: CGCCTGGGCCGATGAGCAGGCCCGTGGGTGGGCCCACATCGAGCCCATGTACTTGCCGCCTGATGACCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CAA 72 bp | GGGTGTGCACGTCGCCCTCGGCTGAGTGGGCTGCGCTaGGCTCTGCCCGGAAGTAGCGGTGGAAGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GCARRPRLSGLR*ALPGSSGGRGC Trigger: GCAGCCTCTTCCACCGCTACTTCCGGGCAGAGCCAAGCGCAGCCCACTCAGCCGAGGGCGACGTGCACACCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CAA 90 bp | TCAGGAGCAGGGTGTGCACGTCGCCCTCGGCTGAGTGGGCTGCGCTaGGCTCTGCCCGGAAGTAGCGGTGGAAGAGGCTGCCGAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SGAGCARRPRLSGLR*ALPGSSGGRGCRGC Trigger: ACAGCCTCGGCAGCCTCTTCCACCGCTACTTCCGGGCAGAGCCAAGCGCAGCCCACTCAGCCGAGGGCGACGTGCACACCCTGCTCCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS TCA 72 bp | GGCTGTAGGAAGTCAGATTCTGGTGCGTGGCCTGGATaGTGGGGCCGCACGGGTGGAGGTCAGGGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GCRKSDSGAWPG*WGRTGGGQGLG Trigger: GCCCAGGCCCTGACCTCCACCCGTGCGGCCCCATCATCCAGGCCACGCACCAGAATCTGACTTCCTACAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS GCA 72 bp | CTTCCTGGGCTTCTGGGCACCTGTCGCCACACAGGCTaGTCTAGGCGGCCTTTAATCAGCGGCCGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LPGLLGTCRHTG*SRRPLISGRSP Trigger: CGGGCTGCGGCCGCTGATTAAAGGCCGCCTAGAGCAGCCTGTGTGGCGACAGGTGCCCAGAAGCCCAGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330912.7 ENST00000338525.7 |
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| CDS CAA 90 bp | GCCTTGGCAGTGAAGGGGCGCTCCGGGCACATGCACAGCGTGAGCTaGTCCAGGACCCGGGGCAATACTAGGGCACCAGACTCGTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: ALAVKGRSGHMHSVS*SRTRGNTRAPDSSC Trigger: GCACGACGAGTCTGGTGCCCTAGTATTGCCCCGGGTCCTGGACAAGCTCACGCTGTGCATGTGCCCGGAGCGCCCCTTCACTGCCAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS TCA 72 bp | AGGCACTGGCCCACTGCCAGTCATCACTCTGCTTGTTaGGGAGGGGCTGCATGTCCAGGGGCCACGGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: RHWPTASHHSAC*GGAACPGATGR Trigger: GCGACCCGTGGCCCCTGGACATGCAGCCCCTCCTCAACAAGCAGAGTGATGACTGGCAGTGGGCCAGTGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 72 bp | GACTCGTCGTGCTCCGGGTTCTCCAGGGAGGAGCGGTaGACAGCAAAGAGGGACAGCTCGGCAATCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSSCSGFSREER*TAKRDSSAISG Trigger: GCCCGAGATTGCCGAGCTGTCCCTCTTTGCTGTCCACCGCTCCTCCCTGGAGAACCCGGAGCACGACGAGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CAA 72 bp | GTGAAGGGGCGCTCCGGGCACATGCACAGCGTGAGCTaGTCCAGGACCCGGGGCAATACTAGGGCACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VKGRSGHMHSVS*SRTRGNTRAPD Trigger: GTCTGGTGCCCTAGTATTGCCCCGGGTCCTGGACAAGCTCACGCTGTGCATGTGCCCGGAGCGCCCCTTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CAA 72 bp | GACGGAGCTGCTGCCACCCCAGCAGATCTGCTCGCCTaGCTGCTTCTTCACGGTCTCCACGGCCTTCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: DGAAATPADLLA*LLLHGLHGLRR Trigger: TCTGCGAAGGCCGTGGAGACCGTGAAGAAGCAGCAAGGCGAGCAGATCTGCTGGGGTGGCAGCAGCTCCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 72 bp | AGCTGGTGGAAGTCGGAAGTGACCAGACGCAGCTTCTaGTCTAGGGTGCTGATGTCGGCTGCGCCCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SWWKSEVTRRSF*SRVLMSAAPAA Trigger: TGCTGCGGGCGCAGCCGACATCAGCACCCTAGACCAGAAGCTGCGTCTGGTCACTTCCGACTTCCACCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 |
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| CDS CCA 72 bp | CAAAGAGGGACAGCTCGGCAATCTCGGGCTCCACACTaGGGAGCCCAGTGGCTTCCAGGTCCAGGAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: QRGTARQSRAPH*GAQWLPGPGRQ Trigger: TTGTCTTCCTGGACCTGGAAGCCACTGGGCTCCCCAGTGTGGAGCCCGAGATTGCCGAGCTGTCCCTCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CAA 72 bp | CTCGTCGTCGTAGACTCCGTTCTAAGCGCGTGCAACTaGGCAGCACTCTCCTGCAGCTGCCTGGCAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVVVDSVLSACN*AALSCSCLASS Trigger: GGAGCTTGCCAGGCAGCTGCAGGAGAGTGCTGCCAAGTTGCACGCGCTTAGAACGGAGTCTACGACGACGAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370232.4 |
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| CDS TCA 72 bp | GGATCTTCACCTCTGTTGGGACCCCTTTCAGTGAGCTaGACCTGTCCTGCAGTGAGGGCCAGACCCGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GSSPLLGPLSVS*TCPAVRARPGY Trigger: GTACCCGGGTCTGGCCCTCACTGCAGGACAGGTTCAGCTCACTGAAAGGGGTCCCAACAGAGGTGAAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 72 bp | TGGTCAGGCTCCGGATGGTATCGAGCAACTGGTCCATaGAGTGTAGCTGCTTCTGGGCGCAGGCACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: WSGSGWYRATGP*SVAASGRRHSP Trigger: AGGGCTGTGCCTGCGCCCAGAAGCAGCTACACTTCATGGACCAGTTGCTCGATACCATCCGGAGCCTGACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 72 bp | TCTCCACGGCCTTCGCAGAGGTGTCAGCAACTGCCATaGCCACTTGCAGCAGCATCCCTGATCGAGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SPRPSQRCQQLP*PLAAASLIEGS Trigger: AGACCCCTCGATCAGGGATGCTGCTGCAAGTGGTCATGGCAGTTGCTGACACCTCTGCGAAGGCCGTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330912.7 |
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| CDS TCA 72 bp | AGACAAAGGTCTCGGCCCGGGGTGCCTCGGACATGGTaGTGTTCCCACGGGGATAGCAAGTCCTCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RQRSRPGVPRTW*CSHGDSKSSNW Trigger: CCAGTTTGAGGACTTGCTATCCCCGTGGGAACATCACCATGTCCGAGGCACCCCGGGCCGAGACCTTTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330912.7 |
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| CDS CCA 72 bp | AGAAGAGCTCCCCCAGCAAGGCCTCGTTCTTCTCCCTaGTGTCCTCGAAGTGCTCCATCAGGCTCGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: RRAPPARPRSSP*CPRSAPSGSSN Trigger: GTTGCTCGAGCCTGATGGAGCACTTCGAGGACACCAGGGAGAAGAACGAGGCCTTGCTGGGGGAGCTCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 72 bp | AATCATAATCAAAGCCATTGTGGGCCACAAGGCAGATaGGCCCTGCCTGGCGGCTCAGGAAGGCCTGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: NHNQSHCGPQGR*ALPGGSGRPAA Trigger: CGCTGCAGGCCTTCCTGAGCCGCCAGGCAGGGCCCATCTGCCTTGTGGCCCACAATGGCTTTGATTATGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370212.5 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS CCA 72 bp | AGTTGGCAATGTTTATTGGGAAACAGCAAACTCTGCTaGGCACCCAGGCCAGCCGGGAGAGCACGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SWQCLLGNSKLC*APRPAGRARPW Trigger: CCAGGGCCGTGCTCTCCCGGCTGGCCTGGGTGCCCAGCAGAGTTTGCTGTTTCCCAATAAACATTGCCAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370231.3 ENST00000370232.4 ENST00000393862.7 |
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| CDS TCA 72 bp | AGACAAAGGTCTCGGCCCGGGGTGCCTCGGACATGGTaGTGTTCCCACGGGGATAGCAAGTCCTCAAACTGT | + |
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Preference number: 6 (lower is better) Translates to: RQRSRPGVPRTW*CSHGDSKSSNC Trigger: ACAGTTTGAGGACTTGCTATCCCCGTGGGAACATCACCATGTCCGAGGCACCCCGGGCCGAGACCTTTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000338525.7 ENST00000370231.3 ENST00000393862.7 |
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| CDS CCA 72 bp | CACCCAATGGTCAGGCTCCGGATGGTATCGAGCAACTaGTCCATGAAGTGTAGCTGCTTCTGGGCGCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: HPMVRLRMVSSN*SMKCSCFWAQA Trigger: TGCCTGCGCCCAGAAGCAGCTACACTTCATGGACCAGTTGCTCGATACCATCCGGAGCCTGACCATTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 72 bp | AGTGCTCCATCAGGCTCGAGCAACTGGAGCACCCAATaGTCAGGCTCCGGATGGTATCGAGCAACTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SAPSGSSNWSTQ*SGSGWYRATGP Trigger: TGGACCAGTTGCTCGATACCATCCGGAGCCTGACCATTGGGTGCTCCAGTTGCTCGAGCCTGATGGAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CAA 72 bp | TGCTGTGCAAAGTACTCCGTTCTAAGCGCGTGCAACTaGGCAGCACTCTCCTGCAGCTGCCTGGCAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CCAKYSVLSACN*AALSCSCLASS Trigger: GGAGCTTGCCAGGCAGCTGCAGGAGAGTGCTGCCAAGTTGCACGCGCTTAGAACGGAGTACTTTGCACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 |
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| CDS CCA 72 bp | GGGGATAGCAAGTCCTCAAACTGTGACCTTTGGCTCTaGGAGCGTCAGCCCCACTCCTGTCACCTACTAGAG | + |
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Preference number: 6 (lower is better) Translates to: GDSKSSNCDLWL*ERQPHSCHLLE Trigger: CTCTAGTAGGTGACAGGAGTGGGGCTGACGCTCCCAGAGCCAAAGGTCACAGTTTGAGGACTTGCTATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393862.7 |
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| CDS TCA 72 bp | TCTCCACGGCCTTCGCAGAGGTGTCAGCAACTGCCATaGCCACTTGCAGCAGTTGGCTGTAGGAAGTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SPRPSQRCQQLP*PLAAVGCRKSD Trigger: ATCTGACTTCCTACAGCCAACTGCTGCAAGTGGTCATGGCAGTTGCTGACACCTCTGCGAAGGCCGTGGAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS CCA 72 bp | GATCGAGGGGTCTCACAGGACCAGCCAGTCAGAGGTTaGAAGGCTCGGAGCCTCTCGCTTAGAAAACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: DRGVSQDQPVRG*KARSLSLRKPK Trigger: TTTTGGTTTTCTAAGCGAGAGGCTCCGAGCCTTCCAACCTCTGACTGGCTGGTCCTGTGAGACCCCTCGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330912.7 |
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| CDS TCA 72 bp | TCCAAGCGGTACTCTGAGGGGCTGCACAGCAGTTCCTaGATTGTCTTTGGCTCTGTGATATACAGACCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SKRYSEGLHSSS*IVFGSVIYRPS Trigger: CGAGGGTCTGTATATCACAGAGCCAAAGACAATTCAGGAACTGCTGTGCAGCCCCTCAGAGTACCGCTTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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| CDS TCA 72 bp | GGCTGCACAGCAGTTCCTGAATTGTCTTTGGCTCTGTaGTATACAGACCCTCGAGGAAGGGGCAGTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GCTAVPELSLAL*YTDPRGRGSLG Trigger: ACCTAAACTGCCCCTTCCTCGAGGGTCTGTATATCACAGAGCCAAAGACAATTCAGGAACTGCTGTGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000330912.7 ENST00000334497.7 ENST00000338525.7 ENST00000370232.4 |
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