RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRERF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124496

Ensembl transcript IDs: ENST00000340840.6, ENST00000354325.2, ENST00000372917.8, ENST00000372922.8, ENST00000541110.5

Found 1146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGTCAGCAAAGTGGCCCAGCGTGATAGGCACACCTACGTGGAGCTaGGAACCAGCATACCTGGGGTGGGCGATGCCTGAAAACACCGGC +
Preference number: 1 (lower is better)
Translates to: LSAKWPSVIGTPTWS*EPAYLGWAMPENTG
Trigger: GCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCACTTTGCTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 90 bp GTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTaGGCGATGCCTGAAAACACCGGCCCAGGAAATCACGCTGCATTA +
Preference number: 1 (lower is better)
Translates to: VIGTPTWSWEPAYLG*AMPENTGPGNHAAL
Trigger: TAATGCAGCGTGATTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp ACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTGGGCGATGCCTaGAAACACCGGCCCAGGAAATCACGCTGCATTAACTCCAAAAGG +
Preference number: 1 (lower is better)
Translates to: TYVELGTSIPGVGDA*KHRPRKSRCINSKR
Trigger: CCTTTTGGAGTTAATGCAGCGTGATTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR GCA 90 bp AAGCAGGATCCTCTCTGTACTGGCGCTGTGTCCCAGCCTGACTTTTaGCCTAACGGTGGGATGGGTCAGTCTGACTCAGCTCAGAAGCCT +
Preference number: 1 (lower is better)
Translates to: KQDPLCTGAVSQPDF*PNGGMGQSDSAQKP
Trigger: AGGCTTCTGAGCTGAGTCAGACTGACCCATCCCACCGTTAGGGCAAAAGTCAGGCTGGGACACAGCGCCAGTACAGAGAGGATCCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 90 bp AGCTCTGCCACCCACAACTTGGAGCTGACCAGCCCCCAGGGAACATaGAAGAGGACAGGACACACCTGTTCTAGAAAACCAGGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: SSATHNLELTSPQGT*KRTGHTCSRKPGPQ
Trigger: CTGAGGACCTGGTTTTCTAGAACAGGTGTGTCCTGTCCTCTTCCATGTTCCCTGGGGGCTGGTCAGCTCCAAGTTGTGGGTGGCAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp CGGCCCAGGAAATCACGCTGCATTAACTCCAAAAGGGGAGTTGCATaGAGCAGGATCCTCTCTGTACTGGCGCTGTGTCCCAGCCTGACT +
Preference number: 1 (lower is better)
Translates to: RPRKSRCINSKRGVA*SRILSVLALCPSLT
Trigger: AGTCAGGCTGGGACACAGCGCCAGTACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 90 bp GGCCAAAGGATGACGGGCAACACAGGGGAAACCTGTTTTCACATTTaGTCATCTCCTCACATGTCGTGTGAGCTGGAGGAGAGCCGTGTA +
Preference number: 1 (lower is better)
Translates to: GQRMTGNTGETCFHI*SSPHMSCELEESRV
Trigger: TACACGGCTCTCCTCCAGCTCACACGACATGTGAGGAGATGACCAAATGTGAAAACAGGTTTCCCCTGTGTTGCCCGTCATCCTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp CGATCAGCCAAGGATATGACAGCTGTAATGGTTCGGCCACAAAGTTaGTGCACACTGCCCAGGCAGTTCCTGACTCACAACTGCTTGGAT +
Preference number: 1 (lower is better)
Translates to: RSAKDMTAVMVRPQS*CTLPRQFLTHNCLD
Trigger: ATCCAAGCAGTTGTGAGTCAGGAACTGCCTGGGCAGTGTGCATCAACTTTGTGGCCGAACCATTACAGCTGTCATATCCTTGGCTGATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTaGGATAAAAGGCAACCGGGATGGTTGACATCTGAATGCAATGGA +
Preference number: 1 (lower is better)
Translates to: KRVACVSHTHTHSKL*DKRQPGWLTSECNG
Trigger: TCCATTGCATTCAGATGTCAACCATCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp CACACACTCACAGCAAGCTTTGGGATAAAAGGCAACCGGGATGGTTaGCATCTGAATGCAATGGAACATGAAGGTCAGCTTCAGTCCCTA +
Preference number: 1 (lower is better)
Translates to: HTLTASFGIKGNRDG*HLNAMEHEGQLQSL
Trigger: TAGGGACTGAAGCTGACCTTCATGTTCCATTGCATTCAGATGTCAACCATCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp TCCTACTCTCATGCTTCTGCTGATATTCTCTCTCATGTCAAGCTATaGATGTTGTCAGCAAAGTGGCCCAGCGTGATAGGCACACCTACG +
Preference number: 1 (lower is better)
Translates to: SYSHASADILSHVKL*MLSAKWPSVIGTPT
Trigger: CGTAGGTGTGCCTATCACGCTGGGCCACTTTGCTGACAACATTCATAGCTTGACATGAGAGAGAATATCAGCAGAAGCATGAGAGTAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp ACTGCTGGGAATGAAAGCCTAAAATTATACAGTACTCCATTCCTGTaGACGGGCCAAAGGATGACGGGCAACACAGGGGAAACCTGTTTT +
Preference number: 1 (lower is better)
Translates to: TAGNESLKLYSTPFL*TGQRMTGNTGETCF
Trigger: AAAACAGGTTTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTTAGGCTTTCATTCCCAGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp GATAAAAGGCAACCGGGATGGTTGACATCTGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCTACTGGGAATGATTTCATGAGAAGG +
Preference number: 1 (lower is better)
Translates to: DKRQPGWLTSECNGT*RSASVPTGNDFMRR
Trigger: CCTTCTCATGAAATCATTCCCAGTAGGGACTGAAGCTGACCTTCATGTTCCATTGCATTCAGATGTCAACCATCCCGGTTGCCTTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp ATGGAACATGAAGGTCAGCTTCAGTCCCTACTGGGAATGATTTCATaGGAAGGTAGCCCAGATGAAACACCTCTTAAAGATAGTTGTGCC +
Preference number: 1 (lower is better)
Translates to: MEHEGQLQSLLGMIS*EGSPDETPLKDSCA
Trigger: GGCACAACTATCTTTAAGAGGTGTTTCATCTGGGCTACCTTCTCATGAAATCATTCCCAGTAGGGACTGAAGCTGACCTTCATGTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp ACACCTGTTCTAGAAAACCAGGTCCTCAGTAAACACTGCTGGGAATaGAAGCCTAAAATTATACAGTACTCCATTCCTGTGAACGGGCCA +
Preference number: 1 (lower is better)
Translates to: TPVLENQVLSKHCWE*KPKIIQYSIPVNGP
Trigger: TGGCCCGTTCACAGGAATGGAGTACTGTATAATTTTAGGCTTTCATTCCCAGCAGTGTTTACTGAGGACCTGGTTTTCTAGAACAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp TGGCATTCTAGGTACTTCAATATGTGTCCTTCAATCACCCTGAAGTaGAAGCAGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTC +
Preference number: 1 (lower is better)
Translates to: WHSRYFNMCPSITLK*KQSWQLNICLQMGL
Trigger: GAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACTGCTTTCACTTCAGGGTGATTGAAGGACACATATTGAAGTACCTAGAATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp GGTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTaGAGGATTACAGGTTTATTACCTTCAAGTACAAACAGCAACCCT +
Preference number: 1 (lower is better)
Translates to: GQSDSAQKPGAKWHF*RITGLLPSSTNSNP
Trigger: AGGGTTGCTGTTTGTACTTGAAGGTAATAAACCTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp CTTTCTGGCATTCTAGGTACTTCAATATGTGTCCTTCAATCACCCTaGAGTGAAAGCAGTCCTGGCAACTTAATATTTGCCTCCAGATGG +
Preference number: 1 (lower is better)
Translates to: LSGILGTSICVLQSP*SESSPGNLIFASRW
Trigger: CCATCTGGAGGCAAATATTAAGTTGCCAGGACTGCTTTCACTTCAGGGTGATTGAAGGACACATATTGAAGTACCTAGAATGCCAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 90 bp CTTTTGCAGAGTCAAAGACGTCAGGTCCTACTCTCATGCTTCTGCTaGTATTCTCTCTCATGTCAAGCTATGAATGTTGTCAGCAAAGTG +
Preference number: 1 (lower is better)
Translates to: LLQSQRRQVLLSCFC*YSLSCQAMNVVSKV
Trigger: CACTTTGCTGACAACATTCATAGCTTGACATGAGAGAGAATATCAGCAGAAGCATGAGAGTAGGACCTGACGTCTTTGACTCTGCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGCTGAAACACAGCTCTaGCACCCACAACTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGAETQL*HPQLGA
Trigger: AGCTCCAAGTTGTGGGTGGCAGAGCTGTGTTTCAGC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAAAAGGGGAGTTGCATaGAGCAGGATCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGKRGVA*SRILSV
Trigger: TACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CAA 90 bp GTCTCTAGTCAGTTCATGCTGAAACACAGCTCTGCCACCCACAACTaGGAGCTGACCAGCCCCCAGGGAACATGGAAGAGGACAGGACAC +
Preference number: 2 (lower is better)
Translates to: VSSQFMLKHSSATHN*ELTSPQGTWKRTGH
Trigger: GTGTCCTGTCCTCTTCCATGTTCCCTGGGGGCTGGTCAGCTCCAAGTTGTGGGTGGCAGAGCTGTGTTTCAGCATGAACTGACTAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CAA 90 bp AACACCGGCCCAGGAAATCACGCTGCATTAACTCCAAAAGGGGAGTaGCATGAAGCAGGATCCTCTCTGTACTGGCGCTGTGTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: NTGPGNHAALTPKGE*HEAGSSLYWRCVPA
Trigger: GGCTGGGACACAGCGCCAGTACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGGGCCGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAATCAAAGTAACGCTTaGTGGGAAAAGTTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGNQSNA*WEKLAP
Trigger: TGGGGCCAACTTTTCCCATCAAGCGTTACTTTGATT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAACTCACAGCAAGCTTTaGGATAAAAGGCAACCGGGA +
Preference number: 2 (lower is better)
Translates to: GEPCNTRACFAPGKLPLATHSKL*DKRQPG
Trigger: TCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAGATGCCATGCTCACTaGAAACTATGGAATGAGGTC +
Preference number: 2 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARCHAH*KLWNEV
Trigger: GACCTCATTCCATAGTTTGCAGTGAGCATGGCATCT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCACGAGGGCTTGCTTTaGCCCTGGAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQHEGLL*PWKAAP
Trigger: AGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACACGAGGGCTTGCTTTaGCCCTGGAAAGCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLHEGLL*PWKAAP
Trigger: AGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMECNGT*RSASVP
Trigger: AGGGACTGAAGCTGACCTTCATGTTCCATTGCATTC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATCCTCACATGTCGTGTaGGCTGGAGGAGAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSSHVV*AGGEPC
Trigger: ACACGGCTCTCCTCCAGCTCACACGACATGTGAGGA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGGGGTGGGCGATGCCTaGAAACACCGGCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYGVGDA*KHRPRK
Trigger: TTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTCCTCACATGTCGTGTaGGCTGGAGGAGAGCCGTGT +
Preference number: 2 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVSSHVV*AGGEPC
Trigger: ACACGGCTCTCCTCCAGCTCACACGACATGTGAGGA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAGTACTCCATTCCTGTaGACGGGCCAAAGGATGACG +
Preference number: 2 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSTPFL*TGQRMT
Trigger: CGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAACTAAGAGGGTCGCCTaGGTCTCACACACACACACT +
Preference number: 2 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLTKRVA*VSHTHT
Trigger: AGTGTGTGTGTGTGAGACGCAGGCGACCCTCTTAGT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGTAACACGAGGGCTTaGTTTGCCCCTGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHCNTRA*FAPGKL
Trigger: CAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGCTGAAACACAGCTCTaGCACCCACAACTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQAETQL*HPQLGA
Trigger: AGCTCCAAGTTGTGGGTGGCAGAGCTGTGTTTCAGC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGCAACCGGGATGGTTaGCATCTGAATGCAATGGAA +
Preference number: 2 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGNRDG*HLNAME
Trigger: TTCCATTGCATTCAGATGTCAACCATCCCGGTTGCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAGCCCCCAGGGAACATaGAAGAGGACAGGACACACC +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYSPQGT*KRTGHT
Trigger: GGTGTGTCCTGTCCTCTTCCATGTTCCCTGGGGGCT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCCCTCAGACACTAAGTaGAGGGCAGTAGTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYPSDTK*RAVVPG
Trigger: CCCAGGGACTACTGCCCTCCACTTAGTGTCTGAGGG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGAGTCCCTACTGGGAATaGTTTCATGAGAAGGTAGCC +
Preference number: 2 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSPYWE*FHEKVA
Trigger: GGCTACCTTCTCATGAAATCATTCCCAGTAGGGACT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGATCTCCAGGCAAAGATaGCATGCTCACTGCAAACTA +
Preference number: 2 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQISRQR*HAHCKL
Trigger: TAGTTTGCAGTGAGCATGGCATCTTTGCCTGGAGAT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAAGCCCCCAGGGAACATaGAAGAGGACAGGACACACC +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSPQGT*KRTGHT
Trigger: GGTGTGTCCTGTCCTCTTCCATGTTCCCTGGGGGCT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAATCAAAGTAACGCTTaGTGGGAAAAGTTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLNQSNA*WEKLAP
Trigger: TGGGGCCAACTTTTCCCATCAAGCGTTACTTTGATT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGCCCAGGCAGTTCCTaGCTCACAACTGCTTGGATA +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYCPGSS*LTTAWI
Trigger: TATCCAAGCAGTTGTGAGTCAGGAACTGCCTGGGCA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATACTAAGAGGGTCGCCTaGGTCTCACACACACACACT +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYTKRVA*VSHTHT
Trigger: AGTGTGTGTGTGTGAGACGCAGGCGACCCTCTTAGT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCAGGCAAAGATGCCATaGTCACTGCAAACTATGGAA +
Preference number: 2 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLQAKMP*SLQTME
Trigger: TTCCATAGTTTGCAGTGAGCATGGCATCTTTGCCTG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVECNGT*RSASVP
Trigger: AGGGACTGAAGCTGACCTTCATGTTCCATTGCATTC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGAACGGGCCAAAGGATaGCGGGCAACACAGGGGAAA +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIERAKG*RATQGK
Trigger: TTTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTAGTCAGTTCATGCTaGAACACAGCTCTGCCACCC +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLVSSC*NTALPP
Trigger: GGGTGGCAGAGCTGTGTTTCAGCATGAACTGACTAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATGTAACACGAGGGCTTaGTTTGCCCCTGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVCNTRA*FAPGKL
Trigger: CAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGCTCACTGCAAACTATaGAATGAGGTCAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLAHCKL*NEVRTE
Trigger: TTCTGTTCTGACCTCATTCCATAGTTTGCAGTGAGC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGGGAACCAGCATACCTaGGGTGGGCGATGCCTGAAA +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIGNQHT*GGRCLK
Trigger: TTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCCCAGGAAATCACGCTaGATTAACTCCAAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYPRKSR*INSKRG
Trigger: TCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGGG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGGCTTGCTTTGCCCCTaGAAAGCTGCCCCTAGCATA +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIGLLCP*KAAPSI
Trigger: TATGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTGGGAATGATTTCATaGGAAGGTAGCCCAGATGAA +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLGMIS*EGSPDE
Trigger: TTCATCTGGGCTACCTTCTCATGAAATCATTCCCAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATCAATCACCCTGAAGTaGAAGCAGTCCTGGCAACTT +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSITLK*KQSWQL
Trigger: AAGTTGCCAGGACTGCTTTCACTTCAGGGTGATTGA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGTCCTTCAATCACCCTaGAGTGAAAGCAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIVLQSP*SESSPG
Trigger: GCCAGGACTGCTTTCACTTCAGGGTGATTGAAGGAC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAACTCACAGCAAGCTTTaGGATAAAAGGCAACCGGGA +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVTHSKL*DKRQPG
Trigger: TCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATAGGCACACCTACGTaGAGCTGGGAACCAGCATAC +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIIGTPT*SWEPAY
Trigger: GTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGCAGTCCAGGTTTCCTaGTTAATGAAGATGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIAVQVS*LMKMEA
Trigger: GGCCTCCATCTTCATTAATCAGGAAACCTGGACTGC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTCCAAAAGGGGAGTTaGATGAAGCAGGATCCTCTC +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILQKGS*MKQDPL
Trigger: GAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATACCTGTTTTCACATTTaGTCATCTCCTCACATGTCG +
Preference number: 2 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYTCFHI*SSPHMS
Trigger: CGACATGTGAGGAGATGACCAAATGTGAAAACAGGT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACAAAATCCCAGTGAATaGGGTTTCACAGTACTTCCA +
Preference number: 2 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVQNPSE*GFTVLP
Trigger: TGGAAGTACTGTGAAACCGCATTCACTGGGATTTTG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCCCAGGAAATCACGCTaGATTAACTCCAAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIPRKSR*INSKRG
Trigger: TCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGGG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCAGGCAAAGATGCCATaGTCACTGCAAACTATGGAA +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIQAKMP*SLQTME
Trigger: TTCCATAGTTTGCAGTGAGCATGGCATCTTTGCCTG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATATTTGCCTCCAGATaGGTCTCTAGTCAGTTCATG +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIIFASR*VSSQFM
Trigger: CATGAACTGACTAGAGACCCATCTGGAGGCAAATAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTTTGTTGGCCTTCAATaGTATTTGTCTTGTATTTGC +
Preference number: 2 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIFVGLQ*YLSCIC
Trigger: GCAAATACAAGACAAATAGCATTGAAGGCCAACAAA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR GCA 72 bp CGTGGAGCTGGGAACCAGCATACCTGGGGTGGGCGATaGCTGAAAACACCGGCCCAGGAAATCACGCTGCAT +
Preference number: 3 (lower is better)
Translates to: RGAGNQHTWGGR*LKTPAQEITLH
Trigger: ATGCAGCGTGATTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp AAGTGGCCCAGCGTGATAGGCACACCTACGTGGAGCTaGGAACCAGCATACCTGGGGTGGGCGATGCCTGAA +
Preference number: 3 (lower is better)
Translates to: KWPSVIGTPTWS*EPAYLGWAMPE
Trigger: TTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp TCAGCAAAGTGGCCCAGCGTGATAGGCACACCTACGTaGAGCTGGGAACCAGCATACCTGGGGTGGGCGATG +
Preference number: 3 (lower is better)
Translates to: SAKWPSVIGTPT*SWEPAYLGWAM
Trigger: CATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCACTTTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp ACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTaGGCGATGCCTGAAAACACCGGCCCAGGAAATCAC +
Preference number: 3 (lower is better)
Translates to: TPTWSWEPAYLG*AMPENTGPGNH
Trigger: GTGATTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp GAGCTGGGAACCAGCATACCTGGGGTGGGCGATGCCTaGAAACACCGGCCCAGGAAATCACGCTGCATTAAC +
Preference number: 3 (lower is better)
Translates to: ELGTSIPGVGDA*KHRPRKSRCIN
Trigger: GTTAATGCAGCGTGATTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR GCA 72 bp CCTCTCTGTACTGGCGCTGTGTCCCAGCCTGACTTTTaGCCTAACGGTGGGATGGGTCAGTCTGACTCAGCT +
Preference number: 3 (lower is better)
Translates to: PLCTGAVSQPDF*PNGGMGQSDSA
Trigger: AGCTGAGTCAGACTGACCCATCCCACCGTTAGGGCAAAAGTCAGGCTGGGACACAGCGCCAGTACAGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp CTGTGTCCCAGCCTGACTTTTGCCCTAACGGTGGGATaGGTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTA +
Preference number: 3 (lower is better)
Translates to: LCPSLTFALTVG*VSLTQLRSLGL
Trigger: TAGCCCCAGGCTTCTGAGCTGAGTCAGACTGACCCATCCCACCGTTAGGGCAAAAGTCAGGCTGGGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR GCA 72 bp AGTTGGCCCCAAGACCCCAGTACTAAGAGGGTCGCCTaGGTCTCACACACACACACTCACAGCAAGCTTTGG +
Preference number: 3 (lower is better)
Translates to: SWPQDPSTKRVA*VSHTHTHSKLW
Trigger: CCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTTAGTACTGGGGTCTTGGGGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGACACGAGGGCTTGCTTaGCCCCTGGAAAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLTRGLA*PLESCP
Trigger: GGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATCTGCCACCCACAACTaGGAGCTGACCAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSATHN*ELTSPQ
Trigger: CTGGGGGCTGGTCAGCTCCAAGTTGTGGGTGGCAGA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGGCCTTCAATGCTATTaGTCTTGTATTTGCTATCGT +
Preference number: 3 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGGLQCY*SCICYR
Trigger: ACGATAGCAAATACAAGACAAATAGCATTGAAGGCC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp CTGTTTTCACATTTGGTCATCTCCTCACATGTCGTGTaGGCTGGAGGAGAGCCGTGTAACACGAGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: LFSHLVISSHVV*AGGEPCNTRAC
Trigger: GCAAGCCCTCGTGTTACACGGCTCTCCTCCAGCTCACACGACATGTGAGGAGATGACCAAATGTGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp AAATCACGCTGCATTAACTCCAAAAGGGGAGTTGCATaGAGCAGGATCCTCTCTGTACTGGCGCTGTGTCCC +
Preference number: 3 (lower is better)
Translates to: KSRCINSKRGVA*SRILSVLALCP
Trigger: GGGACACAGCGCCAGTACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGTTAATGCAGCGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp GCCTGCGTCTCACACACACACACTCACAGCAAGCTTTaGGATAAAAGGCAACCGGGATGGTTGACATCTGAA +
Preference number: 3 (lower is better)
Translates to: ACVSHTHTHSKL*DKRQPGWLTSE
Trigger: TTCAGATGTCAACCATCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp ATGACGGGCAACACAGGGGAAACCTGTTTTCACATTTaGTCATCTCCTCACATGTCGTGTGAGCTGGAGGAG +
Preference number: 3 (lower is better)
Translates to: MTGNTGETCFHI*SSPHMSCELEE
Trigger: CTCCTCCAGCTCACACGACATGTGAGGAGATGACCAAATGTGAAAACAGGTTTCCCCTGTGTTGCCCGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGGCAACCGGGATGGTaGACATCTGAATGCAATGGA +
Preference number: 3 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQRQPGW*TSECNG
Trigger: TCCATTGCATTCAGATGTCAACCATCCCGGTTGCCT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp GGCCACAAAGTTGATGCACACTGCCCAGGCAGTTCCTaGCTCACAACTGCTTGGATAAAACAGGATAGCATA +
Preference number: 3 (lower is better)
Translates to: GHKVDAHCPGSS*LTTAWIKQDSI
Trigger: TATGCTATCCTGTTTTATCCAAGCAGTTGTGAGTCAGGAACTGCCTGGGCAGTGTGCATCAACTTTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACAGGCAACCGGGATGGTaGACATCTGAATGCAATGGA +
Preference number: 3 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHRQPGW*TSECNG
Trigger: TCCATTGCATTCAGATGTCAACCATCCCGGTTGCCT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGCAAAGTCATGGAGGTaGGAGAAGTCTAGAAGTGCT +
Preference number: 3 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQAKSWR*EKSRSA
Trigger: AGCACTTCTAGACTTCTCCAACCTCCATGACTTTGC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTACACGAGGGCTTGCTTaGCCCCTGGAAAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LMFKTGTAGQISKQRQYITRGLA*PLESCP
Trigger: GGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp TGGAACATGAAGGTCAGCTTCAGTCCCTACTGGGAATaGTTTCATGAGAAGGTAGCCCAGATGAAACACCTC +
Preference number: 3 (lower is better)
Translates to: WNMKVSFSPYWE*FHEKVAQMKHL
Trigger: GAGGTGTTTCATCTGGGCTACCTTCTCATGAAATCATTCCCAGTAGGGACTGAAGCTGACCTTCATGTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp CAACCGGGATGGTTGACATCTGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCTACTGGGAATGATTTC +
Preference number: 3 (lower is better)
Translates to: QPGWLTSECNGT*RSASVPTGNDF
Trigger: GAAATCATTCCCAGTAGGGACTGAAGCTGACCTTCATGTTCCATTGCATTCAGATGTCAACCATCCCGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp TATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATaGCGGGCAACACAGGGGAAACCTGTTTTCACATTT +
Preference number: 3 (lower is better)
Translates to: YTVLHSCERAKG*RATQGKPVFTF
Trigger: AAATGTGAAAACAGGTTTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp AAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTaGTTAATGAAGATGGAGGCCGTGGGTTTTCACTGT +
Preference number: 3 (lower is better)
Translates to: KGLQNKQAVQVS*LMKMEAVGFHC
Trigger: ACAGTGAAAACCCACGGCCTCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp AATGAAAGCCTAAAATTATACAGTACTCCATTCCTGTaGACGGGCCAAAGGATGACGGGCAACACAGGGGAA +
Preference number: 3 (lower is better)
Translates to: NESLKLYSTPFL*TGQRMTGNTGE
Trigger: TTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTTAGGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CCA 72 bp GAAAGCAGTCCTGGCAACTTAATATTTGCCTCCAGATaGGTCTCTAGTCAGTTCATGCTGAAACACAGCTCT +
Preference number: 3 (lower is better)
Translates to: ESSPGNLIFASR*VSSQFMLKHSS
Trigger: AGAGCTGTGTTTCAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp AGTCAAAGACGTCAGGTCCTACTCTCATGCTTCTGCTaGTATTCTCTCTCATGTCAAGCTATGAATGTTGTC +
Preference number: 3 (lower is better)
Translates to: SQRRQVLLSCFC*YSLSCQAMNVV
Trigger: GACAACATTCATAGCTTGACATGAGAGAGAATATCAGCAGAAGCATGAGAGTAGGACCTGACGTCTTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR TCA 72 bp GACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTaGAGGATTACAGGTTTATTACCTTCAAGTACAAAC +
Preference number: 3 (lower is better)
Translates to: DSAQKPGAKWHF*RITGLLPSSTN
Trigger: GTTTGTACTTGAAGGTAATAAACCTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAACCTGTTTTCACATTaGGTCATCTCCTCACATGTC +
Preference number: 3 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYNLFSH*VISSHV
Trigger: GACATGTGAGGAGATGACCAAATGTGAAAACAGGTT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTACTCCAAAAGGGGAGTaGCATGAAGCAGGATCCTCT +
Preference number: 3 (lower is better)
Translates to: LMFKTGTAGQISKQRQYITPKGE*HEAGSS
Trigger: AGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGCAGCACCCGTGGTGTaGGCGTCAGGGGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGAAPVV*ASGASG
Trigger: CCCTGACGCCCCTGACGCCCACACCACGGGTGCTGC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGACGGGGACGGGTGGTaGCTCCGGGGACTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGDGDGW*LRGLRH
Trigger: GTGCCGAAGTCCCCGGAGCCACCACCCGTCCCCGTC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACGGAGGCGGCAGTGGTaGCTGGGGCTGAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARRRQW*LGLRRQ
Trigger: CTGCCGCCTCAGCCCCAGCCACCACTGCCGCCTCCG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTGTTGGTGAACCCCTaGGAGCTGGGCTTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLLVNP*ELGLGG
Trigger: CCCGCCCAAGCCCAGCTCTCAGGGGTTCACCAACAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACGGGCTCAGCATGGGTaGGGGCGTGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARAQHG*GRVRGQ
Trigger: CTGCCCCCTTACACGCCCCCACCCATGCTGAGCCCG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGAGGCCCCATGTTGTTaGGGTGGATCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGEAPCC*GGSHWG
Trigger: CCCCCAGTGGGATCCACCTCAACAACATGGGGCCTC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACTCCAGGCCCTGGGGTaGCCGTCACGTTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLALQALG*PSRCCH
Trigger: ATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAGCATCTGTGGGGCCTaGAGTGGCTGTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGSICGA*SGCPPC
Trigger: GCAGGGAGGACAGCCACTGCAGGCCCCACAGATGCT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLLSRP*GDRHVA
Trigger: AGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTCTGGGGGCTTCTCCTaGGGTCGGCCAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGSGGFS*GRPIML
Trigger: CAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGA...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCATCCTCACGCTGCTGGTaGTGGGACAGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLASSRCW*WDRWLC
Trigger: GCAGAGCCACCTGTCCCAGCACCAGCAGCGTGAGGA...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAGGCGTGAGGCTTTCTaGCTCGGGAGGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARREAF*LGRELW
Trigger: CCACAGCTCCCTCCCGAGGCAGAAAGCCTCACGCCT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGTGCTGGGGGCTCCATaGGCTTCTGAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGVLGAP*ASETAA
Trigger: AGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCAC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLALLSRP*GDRHVA
Trigger: AGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAPWMRA*PFSACR
Trigger: CCGACAGGCACTGAATGGCCATGCCCGCATCCACGG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCCTTGCAGGGGAAGATaGTGGTGGGGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGPCRGR*WWGLSR
Trigger: GCGAGACAGACCCCACCACCATCTTCCCCTGCAAGG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACAACGGTGCTGTTGGTaGACCCCTGAGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAQRCCW*TPESWA
Trigger: AGCCCAGCTCTCAGGGGTTCACCAACAGCACCGTTG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGGMAIQ*LSGAEH
Trigger: GTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGATGACACCTCCCAACTaGTGGACGACGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGMTPPN*WTTSSS
Trigger: CGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCAT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCCCGACCTGAAGAGCTaGTTTGGACAGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGPDLKS*FGQPTS
Trigger: ACTGGTGGGCTGTCCAAACCAGCTCTTCAGGTCGGG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGAGCTCAGCATGGCCTaGGCCTGTCTGTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGELSMA*ACLSLE
Trigger: CTCTAGTGACAGACAGGCCCAGGCCATGCTGAGCTC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGAGGGCAGTAGTCCCTaGGAGAGACGATCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGEGSSP*ERRSAK
Trigger: CTTGGCTGATCGTCTCTCCCAGGGACTACTGCCCTC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGSIHHC*LSVQHL
Trigger: CAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGA...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAGTTCGGCCACAAAGTTaGTGCACACTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAVRPQS*CTLPRQ
Trigger: CTGCCTGGGCAGTGTGCATCAACTTTGTGGCCGAAC...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGATGGAGATACGCTGTTaGCCGGCTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGMEIRC*PACCCC
Trigger: GCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCAT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAGMAIQ*LSGAEH
Trigger: GTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCC...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTTTGCCACACTCCTTaGAGGGGAAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLCHTP*RGRWWW
Trigger: CCACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGCCAGGTGTTCCTGTTaGCCTGTACCACTCATGTGC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGARCSC*PVPLMC
Trigger: GCACATGAGTGGTACAGGCCAACAGGAACACCTGGC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAACGCTCCTTTGGGTTaGCCACTTGACTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGNAPLG*PLDSGD
Trigger: GTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTGGCTGGCTTGTCTCTaGCGGAGGGGGCGGCAACGG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMWLACL*RRGRQR
Trigger: CCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGAGATTGGCGAGGCCTaGGGGGCATCCATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMEIGEA*GASIPP
Trigger: GGGCGGAATGGATGCCCCTCAGGCCTCGCCAATCTC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCATCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLASIHHC*LSVQHL
Trigger: CAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGA...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAGTACTCCATTCCTGTaGACGGGCCAAAGGATGACG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGSTPFL*TGQRMT
Trigger: CGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATGTAGCTGCTGCGGCTaGTGCTGCTGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKCSCCG*CCCGGG
Trigger: GCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTGCATCTGTTGCTGCTaGTGCTCTTGCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGCICCC*CSCKCC
Trigger: GCAGCACTTGCAAGAGCAGCAGCAGCAACAGATGCA...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTTGGGGGCCTGGTTCTaGGGGCTTCTCCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLGAWF*GLLLRS
Trigger: CGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAGTAGTACTGGGACATaGAGCCCAGGGGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGSSTGT*SPGESA
Trigger: AGCTGATTCCCCTGGGCTCCATGTCCCAGTACTACT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACGGGCTCAGCATGGGTaGGGGCGTGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKRAQHG*GRVRGQ
Trigger: CTGCCCCCTTACACGCCCCCACCCATGCTGAGCCCG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAGCACCGGGCTCAGCATaGGTGGGGGCGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKAPGSA*VGACKG
Trigger: CCCCTTACACGCCCCCACCCATGCTGAGCCCGGTGC...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCATGTCTGCCTTGGTTGTaGACGTCCAGCCACAAAACC +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLACLPWL*TSSHKT
Trigger: GGTTTTGTGGCTGGACGTTCACAACCAAGGCAGACA...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGGCTCCATGGGCTTCTaGGACAGCAGCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMGSMGF*DSSWRR
Trigger: TCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGACCCGGGTCAGATCTaGGCTCGCTGGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMDPGQI*ARWVSH
Trigger: ATGGGAGACCCAGCGAGCTCAGATCTGACCCGGGTC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACAGATGAAGGAGCCTaGGGGCTGGCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTDEGA*GLAQGL
Trigger: CAGGCCCTGGGCCAGCCCTCAGGCTCCTTCATCTGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGTGCCTGTCGGGAGCTaGACACAGCCCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMVPVGS*TQPHSW
Trigger: CCAACTGTGGGGCTGTGTTCAGCTCCCGACAGGCAC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAGTACTCCATTCCTGTaGACGGGCCAAAGGATGACG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLASTPFL*TGQRMT
Trigger: CGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTTTCAGGGTCGTCCTaGTTCTGCGTCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLSGSS*FCVFFL
Trigger: AAGGAAGAAGACGCAGAAGCAGGACGACCCTGAAAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTCCAAAAGGGGAGTTaGATGAAGCAGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLQKGS*MKQDPL
Trigger: GAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKPWSPG*CPRGCG
Trigger: CCCGCATCCACGGGGGCACCAACCAGGTGACCAAGG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKWHLGP*SPGWCP
Trigger: GGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLSRRW*CCERVS
Trigger: GCTCACCCTCTCACAGCACCACCAGCGGCGAGACAG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGAGGGGAAGATGGTGGTaGGGTCTGTCTCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMRGRWW*GLSRRW
Trigger: CCAGCGGCGAGACAGACCCCACCACCATCTTCCCCT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACCTCCGCAGATGGCTaGGTTGGGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTSADG*VGGLVL
Trigger: CAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACGGCGGCTGTGGCTGTaGTGGGCGAATTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKRRLWL*WANLLR
Trigger: CCGCAACAAATTCGCCCATCACAGCCACAGCCGCCG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAGACCCGGGTCAGATCTaGGCTCGCTGGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKDPGQI*ARWVSH
Trigger: ATGGGAGACCCAGCGAGCTCAGATCTGACCCGGGTC...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTTTGGGTTGGCCACTTaGCTCAGGGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMFGLAT*LRGPWL
Trigger: CAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACAGGGCGGCGGCGGGATaGAGAGAGGTTCCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHRAAAG*REVPAG
Trigger: ACCGGCCGGAACCTCTCTTCATCCCGCCGCCGCCCT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGAGGGCGGCGGCGGGATaGAGAGAGGTTCCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRAAAG*REVPAG
Trigger: ACCGGCCGGAACCTCTCTTCATCCCGCCGCCGCCCT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAATCATGCTGCTTTCATaGTGCTGGACAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAIMLLS*CWTGGK
Trigger: CTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGAT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGATGGGCGAATTTGTTaGGGCTGCGTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGDGRIC*GCVCIS
Trigger: AGAAATACAGACGCAGCCGCAACAAATTCGCCCATC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGTTCTTGGCATCAAACTaGTCCCCAAACGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGFLASN*SPNAPL
Trigger: CAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAA...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACCTGGGGTGGGCGATaGCTGAAAACACCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTWGGR*LKTPAQ
Trigger: CTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCTTGACCTCCGCAGATaGCTGAGTTGGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLDLRR*LSWGPG
Trigger: ACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAGGTTCTCACTACCATaGGCCACATGGTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARFSLP*ATWLVL
Trigger: CAAGACCAACCATGTGGCCCATGGTAGTGAGAACCT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCATTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAFGQGF*SQQASP
Trigger: TGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAA...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACCGCTGGTAAGCTTCTaGGTCCGGATCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKPLVSF*VRISLA
Trigger: GGCCAGCGAGATCCGGACCCAGAAGCTTACCAGCGG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGCAAGTGCTGCATCATaGGTTGGGGCTGATAATACT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGASAAS*VGADNT
Trigger: AGTATTATCAGCCCCAACCCATGATGCAGCACTTGC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGGGGCCACATGGCACTaGGAGACAGCTGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMGATWH*ETAADA
Trigger: AGCATCAGCAGCTGTCTCCCAGTGCCATGTGGCCCC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAGGGGCTCCTCGGCTTTaGGCACACTCGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKGAPRL*AHSADA
Trigger: AGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCC...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACGCGGGGAGCGCAGCTaGCTCTGGTACAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLRGERS*LWYRVA
Trigger: CGCCACCCTGTACCAGAGCCAGCTGCGCTCCCCGCG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCAGGACGGGGACGGGTaGTGGCTCCGGGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLQDGDG*WLRGLR
Trigger: CCGAAGTCCCCGGAGCCACCACCCGTCCCCGTCCTG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAATGTTGTCAGCAAAGTaGCCCAGCGTGATAGGCACA +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAMLSAK*PSVIGT
Trigger: TGTGCCTATCACGCTGGGCCACTTTGCTGACAACAT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGGGGGAGGGTGCTGCTaGCCCGGGTCAGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQGGGCC*PGSDLS
Trigger: GCTCAGATCTGACCCGGGTCAGCAGCACCCTCCCCC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTGGGCATTTCACAGATaGAGGAGCCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMWAFHR*RSLRAG
Trigger: GCCAGCCCTCAGGCTCCTTCATCTGTGAAATGCCCA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKPLVVL*EGELFT
Trigger: GGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGTGGTGGCTGGGGCTaGGGCGGCAGGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSGGWG*GGRTFS
Trigger: AGAGAAGGTCCTGCCGCCTCAGCCCCAGCCACCACT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCTGGGAATGATTTCATaGGAAGGTAGCCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGLGMIS*EGSPDE
Trigger: TTCATCTGGGCTACCTTCTCATGAAATCATTCCCAG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCATGTTTCTGCAACAAGTaGATGGGCAATCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLACFCNK*MGNPTR
Trigger: TCTCGTCGGATTGCCCATGCACTTGTTGCAGAAACA...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGTAGCTGCTGCGGCTaGTGCTGCTGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHCSCCG*CCCGGG
Trigger: GCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACCCAGGAAATCACGCTaGATTAACTCCAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAPRKSR*INSKRG
Trigger: TCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGGG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGATGGACCAAGGGACTTaGATTCCGGGAAAATACAGT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGMDQGT*IPGKYS
Trigger: ACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCAT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGGGTCCGGATCTCGCTaGCCTGGGAGTAGGTGTATT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMGSGSR*PGSRCI
Trigger: AATACACCTACTCCCAGGCCAGCGAGATCCGGACCC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCCCAGGGGAATCAGCTaGACAGTGTGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMPRGIS*TVCACS
Trigger: AGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAACTCCTTCAGGCAGATaGAGCATGTCAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLATPSGR*SMSACS
Trigger: AGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAAGAGCCCCGAGCCCTaGCGCACCGGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLKSPEP*RTGLSM
Trigger: CATGCTGAGCCCGGTGCGCCAGGGCTCGGGGCTCTT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQRALVT*LVPPWM
Trigger: CATCCACGGGGGCACCAACCAGGTGACCAAGGCCCG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGGCTGGCTTGTCTCTaGCGGAGGGGGCGGCAACGG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLWLACL*RRGRQR
Trigger: CCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCCCTCAGACACTAAGTaGAGGGCAGTAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMPSDTK*RAVVPG
Trigger: CCCAGGGACTACTGCCCTCCACTTAGTGTCTGAGGG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGAGATTGGCGAGGCCTaGGGGGCATCCATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQEIGEA*GASIPP
Trigger: GGGCGGAATGGATGCCCCTCAGGCCTCGCCAATCTC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCCAGTGAAACCAGGGTaGGGCTGCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQPVKPG*GCWGTC
Trigger: GCAGGTGCCCCAGCAGCCTCACCCTGGTTTCACTGG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCCAGTGAAACCAGGGTaGGGCTGCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLPVKPG*GCWGTC
Trigger: GCAGGTGCCCCAGCAGCCTCACCCTGGTTTCACTGG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTGTTGCATGTGCTGTaGCAGCATCTGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLLHVL*QHLWGL
Trigger: CAGGCCCCACAGATGCTGTCACAGCACATGCAACAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAGAACGGGCCAAAGGATaGCGGGCAACACAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKERAKG*RATQGK
Trigger: TTTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTC...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGAAACAGCAACCCTGCTaGCAGGGACAGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMKQQPC*QGQEEA
Trigger: TGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLGTLG*CFLGIS
Trigger: TGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCGCTGTTGCCCGGCTTaGTGCTGTTGCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRCCPA*CCCCGG
Trigger: CCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAATTGAACCCTGCCGCTaGTGCAGCTGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKIEPCR*CSCSCC
Trigger: GCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAAT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMQLDSV*LLWGIL
Trigger: CAGTATACCCCAGAGCAGGCACACACTGTCCAGCTG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTTGGGGGCCTGGTTCTaGGGGCTTCTCCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLLGAWF*GLLLRS
Trigger: CGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCTGTGGGGCCTGCAGTaGCTGTCCTCCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQLWGLQ*LSSLHW
Trigger: CCAGTGCAGGGAGGACAGCCACTGCAGGCCCCACAG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACTGTGGGGCCTGCAGTaGCTGTCCTCCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLLWGLQ*LSSLHW
Trigger: CCAGTGCAGGGAGGACAGCCACTGCAGGCCCCACAG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGCTCTGGTACAGGGTaGCGCCCGAGTAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGSGTG*RPSRRQ
Trigger: CTGCCTCCTACTCGGGCGCCACCCTGTACCAGAGCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGGGCGCCAGGGCCGTaGCCGGAGATGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQWAPGP*PEMRTL
Trigger: CAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGGGCGCCAGGGCCGTaGCCGGAGATGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLWAPGP*PEMRTL
Trigger: CAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGCAGCACCCGTGGTGTaGGCGTCAGGGGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVAAPVV*ASGASG
Trigger: CCCTGACGCCCCTGACGCCCACACCACGGGTGCTGC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATGCCATCGATGCTGTTaGAGCGACACAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKCHRCC*SDTAAP
Trigger: GGGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMALCVS*ARAEIS
Trigger: AGATATCTCTGCCCTGGCCCAGGACACACACAAGGC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLRALVT*LVPPWM
Trigger: CATCCACGGGGGCACCAACCAGGTGACCAAGGCCCG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLWHLGP*SPGWCP
Trigger: GGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQLSRRW*CCERVS
Trigger: GCTCACCCTCTCACAGCACCACCAGCGGCGAGACAG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTCGGCTGATGCTTCCTaGGGATTTCGAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMSADAS*GFRAQA
Trigger: TGCCTGTGCTCGAAATCCCCAGGAAGCATCAGCCGA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACCCCCACATCATGTTTaGGTTGGCCAGGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKPPHHV*VGQVST
Trigger: CGTGGAAACCTGGCCAACTCAAACATGATGTGGGGG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGGGTGCTGCCCGACCTaGAGAGCTGGTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQGCCPT*RAGLDS
Trigger: GCTGTCCAAACCAGCTCTTCAGGTCGGGCAGCACCC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGAGGCCCCATGTTGTTaGGGTGGATCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHEAPCC*GGSHWG
Trigger: CCCCCAGTGGGATCCACCTCAACAACATGGGGCCTC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGTTTGGGTTGGCCACTTaGCTCAGGGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQFGLAT*LRGPWL
Trigger: CAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAA...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATCTCCTGCACGGTCTTaGGGGGCTCCTCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSPARS*GAPRLW
Trigger: CCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTCTCCTGCACGGTCTTaGGGGGCTCCTCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQSPARS*GAPRLW
Trigger: CCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGGCGGCGGCGGGATaGAGAGAGGTTCCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRAAAG*REVPAG
Trigger: ACCGGCCGGAACCTCTCTTCATCCCGCCGCCGCCCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGGGCGGGAGAAGCTTaGCAGGGACAGACACGGGCA +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQWAGEA*QGQTRA
Trigger: TGCCCGTGTCTGTCCCTGTCAAGCTTCTCCCGCCCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTGCCCAGGCAGTTCCTaGCTCACAACTGCTTGGATA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMCPGSS*LTTAWI
Trigger: TATCCAAGCAGTTGTGAGTCAGGAACTGCCTGGGCA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGGAAGGGATAGCCGGTaGTGGGGGCTCCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLGRDSR*WGLHGL
Trigger: AAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAGCATCTGTGGGGCCTaGAGTGGCTGTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSICGA*SGCPPC
Trigger: GCAGGGAGGACAGCCACTGCAGGCCCCACAGATGCT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTGCAGGTGCATCTGTTaGTGCTGCTGCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMCRCIC*CCCSCK
Trigger: CTTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATCAACATCTACAGTCTaGTCTCCAGGCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKSTSTV*SPGPGV
Trigger: CACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGGTGCCCCCGTGGATaGGGGCATGGCCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQWCPRG*GHGHSV
Trigger: CACTGAATGGCCATGCCCGCATCCACGGGGGCACCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTGGTCACCTGGTTGGTaGCCCCGTGGATGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLWSPGW*PRGCGH
Trigger: ATGCCCGCATCCACGGGGGCACCAACCAGGTGACCA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGGTCACCTGGTTGGTaGCCCCGTGGATGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLWSPGW*PRGCGH
Trigger: ATGCCCGCATCCACGGGGGCACCAACCAGGTGACCA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTTTGCCACACTCCTTaGAGGGGAAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLCHTP*RGRWWW
Trigger: CCACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGGGCGAGCAGAGCTTTaGATTGCTCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQGRAEL*IAPHPR
Trigger: GCGAGGATGGGGAGCAATGCAAAGCTCTGCTCGCCC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGCTGAAACACAGCTCTaGCACCCACAACTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMAETQL*HPQLGA
Trigger: AGCTCCAAGTTGTGGGTGGCAGAGCTGTGTTTCAGC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGCTGAGTTGGGGGCCTaGTTCTGGGGGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLAELGA*FWGLLL
Trigger: CAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCTGAGTTGGGGGCCTaGTTCTGGGGGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHAELGA*FWGLLL
Trigger: CAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGCCCTCATTCCCCCGTaGGACCGCATGTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLALIPP*DRMWPF
Trigger: GAATGGCCACATGCGGTCCCACGGGGGAATGAGGGC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGGGGCTCCTCGGCTTTaGGCACACTCGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLGAPRL*AHSADA
Trigger: AGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGCGGGGAGCGCAGCTaGCTCTGGTACAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRGERS*LWYRVA
Trigger: CGCCACCCTGTACCAGAGCCAGCTGCGCTCCCCGCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCAGCACCCGTGGTGTaGGCGTCAGGGGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAAPVV*ASGASG
Trigger: CCCTGACGCCCCTGACGCCCACACCACGGGTGCTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACAGGACGGGGACGGGTaGTGGCTCCGGGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGQDGDG*WLRGLR
Trigger: CCGAAGTCCCCGGAGCCACCACCCGTCCCCGTCCTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHPWMRA*PFSACR
Trigger: CCGACAGGCACTGAATGGCCATGCCCGCATCCACGG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGGTTGGTGCCCCCGTaGATGCGGGCATGGCCATTC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHWLVPP*MRAWPF
Trigger: GAATGGCCATGCCCGCATCCACGGGGGCACCAACCA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGCAGGGGAAGATGGTaGTGGGGTCTGTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHCRGRW*WGLSRR
Trigger: GCGGCGAGACAGACCCCACCACCATCTTCCCCTGCA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACGGAGGCGGCAGTGGTaGCTGGGGCTGAGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVRRRQW*LGLRRQ
Trigger: CTGCCGCCTCAGCCCCAGCCACCACTGCCGCCTCCG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRPTSS*LACLWR
Trigger: CCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAATATTTGCCTCCAGATaGGTCTCTAGTCAGTTCATG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAIFASR*VSSQFM
Trigger: CATGAACTGACTAGAGACCCATCTGGAGGCAAATAT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGATAGGCACACCTACGTaGAGCTGGGAACCAGCATAC +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMIGTPT*SWEPAY
Trigger: GTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTAT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGTGTGGGGCTGCTGTaGCTCACAGCCAGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQCVGLL*LTASSP
Trigger: GGGGGAACTGGCTGTGAGCCACAGCAGCCCCACACA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCACACAGCACTGTGGTaGGGAGACGTCGCTCACACC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLHTALW*GDVAHT
Trigger: GGTGTGAGCGACGTCTCCTCACCACAGTGCTGTGTG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACACACAGCACTGTGGTaGGGAGACGTCGCTCACACC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLHTALW*GDVAHT
Trigger: GGTGTGAGCGACGTCTCCTCACCACAGTGCTGTGTG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGCACTACTCCACGGCTaGCATGTCTGTGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQALLHG*HVCERG
Trigger: GCCACGTTCACAGACATGTCAGCCGTGGAGTAGTGC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGGGAGGGTGCTGCTaGCCCGGGTCAGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGGGCC*PGSDLS
Trigger: GCTCAGATCTGACCCGGGTCAGCAGCACCCTCCCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHPLVVL*EGELFT
Trigger: GGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAACTAATTCAGGAATTTaGACTGTCTCGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLATNSGI*TVSLRR
Trigger: CCTCCTTAACGAGACAGTTCAAATTCCTGAATTAGT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGATCATGCTGCTTTCATaGTGCTGGACAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMIMLLS*CWTGGK
Trigger: CTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGAT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKVGQSC*FHAAGQ
Trigger: CTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGAC...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGATGGTTTCCAGGCCCTaGATGACTTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQMVSRP*MTSPPS
Trigger: GGAGGGTGGGGAAGTCATGCAGGGCCTGGAAACCAT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGTAGCTGCTGCGGCTaGTGCTGCTGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCSCCG*CCCGGG
Trigger: GCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLVPPGF*FPEGMA
Trigger: TGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCAC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGGTGAGTTTTCATGTGTaGATTTCGGCTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGVSFHV*ISAFDL
Trigger: AAGATCAAAAGCCGAAATGCACACATGAAAACTCAC...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGCGAGCAGAGCTTTaGATTGCTCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGRAEL*IAPHPR
Trigger: GCGAGGATGGGGAGCAATGCAAAGCTCTGCTCGCCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCACGAGGGCTTGCTTTaGCCCTGGAAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHHEGLL*PWKAAP
Trigger: AGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCTCCAAAAGGGGAGTTaGATGAAGCAGGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLQKGS*MKQDPL
Trigger: GAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAAGGTTTCCACGTAGCTaGACATGGTTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKRFPRS*TWFPGP
Trigger: AGGGCCTGGAAACCATGTCCAGCTACGTGGAAACCT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGGCCACATGGCACTaGGAGACAGCTGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGATWH*ETAADA
Trigger: AGCATCAGCAGCTGTCTCCCAGTGCCATGTGGCCCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCATCTGGGGCCACATaGCACTGGGAGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHASGAT*HWETAA
Trigger: AGCAGCTGTCTCCCAGTGCCATGTGGCCCCAGATGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVPWDRM*PFRAGR
Trigger: CCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGGCTCTGGTACAGGGTaGCGCCCGAGTAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVGSGTG*RPSRRQ
Trigger: CTGCCTCCTACTCGGGCGCCACCCTGTACCAGAGCC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAGCGCAGCTGGCTCTaGTACAGGGTGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGERSWL*YRVAPE
Trigger: CTCGGGCGCCACCCTGTACCAGAGCCAGCTGCGCTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGAGCGCAGCTGGCTCTaGTACAGGGTGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYERSWL*YRVAPE
Trigger: CTCGGGCGCCACCCTGTACCAGAGCCAGCTGCGCTC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACGCGGGGAGCGCAGCTaGCTCTGGTACAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVRGERS*LWYRVA
Trigger: CGCCACCCTGTACCAGAGCCAGCTGCGCTCCCCGCG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGGGCTCAGCATGGGTaGGGGCGTGTAAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRAQHG*GRVRGQ
Trigger: CTGCCCCCTTACACGCCCCCACCCATGCTGAGCCCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCACCGGGCTCAGCATaGGTGGGGGCGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAPGSA*VGACKG
Trigger: CCCCTTACACGCCCCCACCCATGCTGAGCCCGGTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAAGAGCCCCGAGCCCTaGCGCACCGGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGKSPEP*RTGLSM
Trigger: CATGCTGAGCCCGGTGCGCCAGGGCTCGGGGCTCTT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACAGGACGGGGACGGGTaGTGGCTCCGGGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVQDGDG*WLRGLR
Trigger: CCGAAGTCCCCGGAGCCACCACCCGTCCCCGTCCTG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVPWSPG*CPRGCG
Trigger: CCCGCATCCACGGGGGCACCAACCAGGTGACCAAGG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACACACCTCCCAACTGCTaGACGACGTCGTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHTPPNC*TTSSSR
Trigger: CCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACATGCTGCTGGACAGGTaGGAAGAGGAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHMLLDR*EEEAWS
Trigger: GGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCAT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGCACTACTCCACGGCTaGCATGTCTGTGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQALLHG*HVCERG
Trigger: GCCACGTTCACAGACATGTCAGCCGTGGAGTAGTGC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAGATTGGCGAGGCCTaGGGGGCATCCATTCCGCCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGEIGEA*GASIPP
Trigger: GGGCGGAATGGATGCCCCTCAGGCCTCGCCAATCTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCAGTGAAACCAGGGTaGGGCTGCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPVKPG*GCWGTC
Trigger: GCAGGTGCCCCAGCAGCCTCACCCTGGTTTCACTGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTCCAGGCCCTGGGGTaGCCGTCACGTTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLQALG*PSRCCH
Trigger: ATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMDDILT*QASAVA
Trigger: TGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACAGATGAAGGAGCCTaGGGGCTGGCCCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTDEGA*GLAQGL
Trigger: CAGGCCCTGGGCCAGCCCTCAGGCTCCTTCATCTGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGGGCATTTCACAGATaGAGGAGCCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLWAFHR*RSLRAG
Trigger: GCCAGCCCTCAGGCTCCTTCATCTGTGAAATGCCCA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAAACACTGCTGGGAATaGAAGCCTAAAATTATACAG +
Preference number: 4 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAKHCWE*KPKIIQ
Trigger: CTGTATAATTTTAGGCTTTCATTCCCAGCAGTGTTT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGAAAAGGGGAGTTGCATaGAGCAGGATCCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMKRGVA*SRILSV
Trigger: TACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGGGGTGGGCGATGCCTaGAAACACCGGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVGVGDA*KHRPRK
Trigger: TTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATGTCCATGGCTTTCCTaGAGTTCAGAGACCACTGTC +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKCPWLS*SSETTV
Trigger: GACAGTGGTCTCTGAACTTCAGGAAAGCCATGGACA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGATGGTTTCCAGGCCCTaGATGACTTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLMVSRP*MTSPPS
Trigger: GGAGGGTGGGGAAGTCATGCAGGGCCTGGAAACCAT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGCTGTTGCCCGGCTTaGTGCTGTTGCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRCCPA*CCCCGG
Trigger: CCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCGCTGTTGCCCGGCTTaGTGCTGTTGCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYRCCPA*CCCCGG
Trigger: CCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGTCAACATCTACAGTCTaGTCTCCAGGCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSTSTV*SPGPGV
Trigger: CACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGA...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTGGTGCCCCCGTGGATaGGGGCATGGCCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVWCPRG*GHGHSV
Trigger: CACTGAATGGCCATGCCCGCATCCACGGGGGCACCA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGATGACACCTCCCAACTaGTGGACGACGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLMTPPN*WTTSSS
Trigger: CGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCAT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGAACACAACACATACATaGAGGCAGAATTATTTCAGA +
Preference number: 4 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGNTTHT*RQNYFR
Trigger: TCTGAAATAATTCTGCCTGCATGTATGTGTTGTGTT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGAGCAGAGCTTTGCATTaGTCCCCATCCTCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSRALH*SPSSPP
Trigger: AGGGGGCGAGGATGGGGAGCAATGCAAAGCTCTGCT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTGGGGGCCTGGTTCTaGGGGCTTCTCCTGCGGTCG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLGAWF*GLLLRS
Trigger: CGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGATTGGTAGCCATCAGTaGGCTCAGCCTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLIGSHQ*AQPGLV
Trigger: CACCAGCCCAGGCTGAGCCCACTGATGGCTACCAAT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGTCCGGATCTCGCTaGCCTGGGAGTAGGTGTATT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGSGSR*PGSRCI
Trigger: AATACACCTACTCCCAGGCCAGCGAGATCCGGACCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGTGGGGCCTGCAGTaGCTGTCCTCCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLWGLQ*LSSLHW
Trigger: CCAGTGCAGGGAGGACAGCCACTGCAGGCCCCACAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGCAAGTGCTGCATCATaGGTTGGGGCTGATAATACT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMASAAS*VGADNT
Trigger: AGTATTATCAGCCCCAACCCATGATGCAGCACTTGC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCCCATGTTGTTGAGGTaGATCCCACTGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQPMLLR*IPLGDR
Trigger: CCTATCCCCCAGTGGGATCCACCTCAACAACATGGG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPWDRM*PFRAGR
Trigger: CCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYPWDRM*PFRAGR
Trigger: CCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGCTCTGGTACAGGGTaGCGCCCGAGTAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGSGTG*RPSRRQ
Trigger: CTGCCTCCTACTCGGGCGCCACCCTGTACCAGAGCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGAGCGCAGCTGGCTCTaGTACAGGGTGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVERSWL*YRVAPE
Trigger: CTCGGGCGCCACCCTGTACCAGAGCCAGCTGCGCTC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGCGGGGAGCGCAGCTaGCTCTGGTACAGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRGERS*LWYRVA
Trigger: CGCCACCCTGTACCAGAGCCAGCTGCGCTCCCCGCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGGCGCCAGGGCCGTaGCCGGAGATGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWAPGP*PEMRTL
Trigger: CAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCAGCACCCGTGGTGTaGGCGTCAGGGGCGTCAGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAAPVV*ASGASG
Trigger: CCCTGACGCCCCTGACGCCCACACCACGGGTGCTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGACGGGGACGGGTGGTaGCTCCGGGGACTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDDGDGW*LRGLRH
Trigger: GTGCCGAAGTCCCCGGAGCCACCACCCGTCCCCGTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCAGGACGGGGACGGGTaGTGGCTCCGGGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDQDGDG*WLRGLR
Trigger: CCGAAGTCCCCGGAGCCACCACCCGTCCCCGTCCTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPWSPG*CPRGCG
Trigger: CCCGCATCCACGGGGGCACCAACCAGGTGACCAAGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRALVT*LVPPWM
Trigger: CATCCACGGGGGCACCAACCAGGTGACCAAGGCCCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWHLGP*SPGWCP
Trigger: GGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCGACATCGAGCTGGCTaGCTTGTCTCTGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVRHRAG*LVSGGG
Trigger: CCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVRPTSS*LACLWR
Trigger: CCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAGCCCCCAGGGAACATaGAAGAGGACAGGACACACC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSPQGT*KRTGHT
Trigger: GGTGTGTCCTGTCCTCTTCCATGTTCCCTGGGGGCT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGAACCAGCATACCTaGGGTGGGCGATGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGNQHT*GGRCLK
Trigger: TTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAACACCTACGTGGAGCTaGGAACCAGCATACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLTPTWS*EPAYLG
Trigger: CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
3UTR CAA 72 bp CCAGGAAATCACGCTGCATTAACTCCAAAAGGGGAGTaGCATGAAGCAGGATCCTCTCTGTACTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PGNHAALTPKGE*HEAGSSLYWRC
Trigger: ACAGCGCCAGTACAGAGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGTTAATGCAGCGTGATTTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACCTCCGCAGATGGCTaGGTTGGGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTSADG*VGGLVL
Trigger: CAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATACCTCCGCAGATGGCTaGGTTGGGGGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYTSADG*VGGLVL
Trigger: CAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGCTCCATGGGCTTCTaGGACAGCAGCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGSMGF*DSSWRR
Trigger: TCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGTGCTGCCCGACCTaGAGAGCTGGTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGCCPT*RAGLDS
Trigger: GCTGTCCAAACCAGCTCTTCAGGTCGGGCAGCACCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGGCGGCTGTGGCTGTaGTGGGCGAATTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRRLWL*WANLLR
Trigger: CCGCAACAAATTCGCCCATCACAGCCACAGCCGCCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGACCCGGGTCAGATCTaGGCTCGCTGGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGDPGQI*ARWVSH
Trigger: ATGGGAGACCCAGCGAGCTCAGATCTGACCCGGGTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGGGAGGGTGCTGCTaGCCCGGGTCAGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGGGCC*PGSDLS
Trigger: GCTCAGATCTGACCCGGGTCAGCAGCACCCTCCCCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAGGCCCCATGTTGTTaGGGTGGATCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGEAPCC*GGSHWG
Trigger: CCCCCAGTGGGATCCACCTCAACAACATGGGGCCTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCTCCTGCACGGTCTTaGGGGGCTCCTCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSPARS*GAPRLW
Trigger: CCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGTCACACAATCGTCGATaGTTTCTGCCAGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSHNRR*FLPGVS
Trigger: GGACACGCCTGGCAGAAATCATCGACGATTGTGTGA...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTGCCTGTCGGGAGCTaGACACAGCCCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVPVGS*TQPHSW
Trigger: CCAACTGTGGGGCTGTGTTCAGCTCCCGACAGGCAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTGTTGGTGAACCCCTaGGAGCTGGGCTTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLLVNP*ELGLGG
Trigger: CCCGCCCAAGCCCAGCTCTCAGGGGTTCACCAACAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGAAGGGATAGCCGGTaGTGGGGGCTCCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGRDSR*WGLHGL
Trigger: AAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGCATCTGTGGGGCCTaGAGTGGCTGTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSICGA*SGCPPC
Trigger: GCAGGGAGGACAGCCACTGCAGGCCCCACAGATGCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACATGGAGATACGCTGTTaGCCGGCTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHMEIRC*PACCCC
Trigger: GCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCAT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGTAGCTGCTGCGGCTaGTGCTGCTGTGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCSCCG*CCCGGG
Trigger: GCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCCTCACGCTGCTGGTaGTGGGACAGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSSRCW*WDRWLC
Trigger: GCAGAGCCACCTGTCCCAGCACCAGCAGCGTGAGGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTCCTCACGCTGCTGGTaGTGGGACAGGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYSSRCW*WDRWLC
Trigger: GCAGAGCCACCTGTCCCAGCACCAGCAGCGTGAGGA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATTCTTGGCATCAAACTaGTCCCCAAACGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKFLASN*SPNAPL
Trigger: CAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAGAGGTTCCGGCCGGTaGCGGAACTTTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLRGSGR*RNFFFS
Trigger: GGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTCT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGTGCCCCCGTGGATaGGGGCATGGCCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWCPRG*GHGHSV
Trigger: CACTGAATGGCCATGCCCGCATCCACGGGGGCACCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGTCACCTGGTTGGTaGCCCCGTGGATGCGGGCAT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWSPGW*PRGCGH
Trigger: ATGCCCGCATCCACGGGGGCACCAACCAGGTGACCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAGGCGTGAGGCTTTCTaGCTCGGGAGGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYRREAF*LGRELW
Trigger: CCACAGCTCCCTCCCGAGGCAGAAAGCCTCACGCCT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATACCTGGGGTGGGCGATaGCTGAAAACACCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYTWGGR*LKTPAQ
Trigger: CTGGGCCGGTGTTTTCAGGCATCGCCCACCCCAGGT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCTGCTTTCATGCTGCTaGACAGGTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHLLSCC*TGGKRR
Trigger: CCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCTGAGTTGGGGGCCTaGTTCTGGGGGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAELGA*FWGLLL
Trigger: CAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCCAGGTGTTCCTGTTaGCCTGTACCACTCATGTGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHARCSC*PVPLMC
Trigger: GCACATGAGTGGTACAGGCCAACAGGAACACCTGGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTCGAGGTATCCATTTaGCCAAGGTTTTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLEVSI*PRFLEP
Trigger: TGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCGCTGGTAAGCTTCTaGGTCCGGATCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPLVSF*VRISLA
Trigger: GGCCAGCGAGATCCGGACCCAGAAGCTTACCAGCGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGGATAGCCGGTGCTaGGGGCTCCATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRDSRC*GLHGLL
Trigger: CAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAGGGATAGCCGGTGCTaGGGGCTCCATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYRDSRC*GLHGLL
Trigger: CAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGTCCTCACGCTGCTaGTGCTGGGACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLSSRC*CWDRWL
Trigger: GAGCCACCTGTCCCAGCACCAGCAGCGTGAGGACAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCCCATGTTGTTGAGGTaGATCCCACTGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHPMLLR*IPLGDR
Trigger: CCTATCCCCCAGTGGGATCCACCTCAACAACATGGG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAACGCTCCTTTGGGTTaGCCACTTGACTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLNAPLG*PLDSGD
Trigger: GTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCCTCATTCCCCCGTaGGACCGCATGTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGALIPP*DRMWPF
Trigger: GAATGGCCACATGCGGTCCCACGGGGGAATGAGGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGGCTCCTCGGCTTTaGGCACACTCGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGAPRL*AHSADA
Trigger: AGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGAGCGCAGCTGGCTCTaGTACAGGGTGGCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDERSWL*YRVAPE
Trigger: CTCGGGCGCCACCCTGTACCAGAGCCAGCTGCGCTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCACCGGGCTCAGCATaGGTGGGGGCGTGTAAGGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAPGSA*VGACKG
Trigger: CCCCTTACACGCCCCCACCCATGCTGAGCCCGGTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAAGAGCCCCGAGCCCTaGCGCACCGGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDKSPEP*RTGLSM
Trigger: CATGCTGAGCCCGGTGCGCCAGGGCTCGGGGCTCTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLLSRP*GDRHVA
Trigger: AGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGCCAATGTTGATGCGTaGTTCAACATCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMANVDA*FNIYSL
Trigger: CAGACTGTAGATGTTGAACCACGCATCAACATTGGC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHALCVS*ARAEIS
Trigger: AGATATCTCTGCCCTGGCCCAGGACACACACAAGGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCTTCCATACCAGTGTaGCCTTGTGTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHASIPV*PCVCPG
Trigger: CCCAGGACACACACAAGGCCACACTGGTATGGAAGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCACCTGGCAATGCACTaGAACAGCACAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMHLAMH*NSTNSE
Trigger: TTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGACGGGGACGGGTGGTaGCTCCGGGGACTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIDGDGW*LRGLRH
Trigger: GTGCCGAAGTCCCCGGAGCCACCACCCGTCCCCGTC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPWMRA*PFSACR
Trigger: CCGACAGGCACTGAATGGCCATGCCCGCATCCACGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGTTGGTGCCCCCGTaGATGCGGGCATGGCCATTC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWLVPP*MRAWPF
Trigger: GAATGGCCATGCCCGCATCCACGGGGGCACCAACCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLSRRW*CCERVS
Trigger: GCTCACCCTCTCACAGCACCACCAGCGGCGAGACAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGGGAAGATGGTGGTaGGGTCTGTCTCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRGRWW*GLSRRW
Trigger: CCAGCGGCGAGACAGACCCCACCACCATCTTCCCCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGCAGGGGAAGATGGTaGTGGGGTCTGTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCRGRW*WGLSRR
Trigger: GCGGCGAGACAGACCCCACCACCATCTTCCCCTGCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGACATCGAGCTGGCTaGCTTGTCTCTGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRHRAG*LVSGGG
Trigger: CCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGTGTGGGGCTGCTGTaGCTCACAGCCAGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYCVGLL*LTASSP
Trigger: GGGGGAACTGGCTGTGAGCCACAGCAGCCCCACACA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACGTCGCTCACACCTTaGCCTCCGCAGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTSLTP*PPQMAE
Trigger: CTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACACACAGCACTGTGGTaGGGAGACGTCGCTCACACC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHTALW*GDVAHT
Trigger: GGTGTGAGCGACGTCTCCTCACCACAGTGCTGTGTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTGTCTGCCTTGGTTGTaGACGTCCAGCCACAAAACC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLCLPWL*TSSHKT
Trigger: GGTTTTGTGGCTGGACGTTCACAACCAAGGCAGACA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCCATCACTGCTGACTaGGTGTGCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSITAD*VCSTWA
Trigger: GGCCCAGGTGCTGCACACTCAGTCAGCAGTGATGGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCAGTGAAACCAGGGTaGGGCTGCTGGGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPVKPG*GCWGTC
Trigger: GCAGGTGCCCCAGCAGCCTCACCCTGGTTTCACTGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGGGGGAGGGTGCTGCTaGCCCGGGTCAGATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIGGGCC*PGSDLS
Trigger: GCTCAGATCTGACCCGGGTCAGCAGCACCCTCCCCC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTTGGGTTGGCCACTTaGCTCAGGGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFGLAT*LRGPWL
Trigger: CAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTCCAGGCCCTGGGGTaGCCGTCACGTTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLQALG*PSRCCH
Trigger: ATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPLVVL*EGELFT
Trigger: GGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGCAAAAGCCGCCTTCTaGGCCTTTTGCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLAKAAF*AFCLCC
Trigger: ACAACAGAGGCAAAAGGCTCAGAAGGCGGCTTTTGC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGTGGTGGCTGGGGCTaGGGCGGCAGGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSGGWG*GGRTFS
Trigger: AGAGAAGGTCCTGCCGCCTCAGCCCCAGCCACCACT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATGGGCGGGAGAAGCTTaGCAGGGACAGACACGGGCA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVWAGEA*QGQTRA
Trigger: TGCCCGTGTCTGTCCCTGTCAAGCTTCTCCCGCCCA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGGCAACCGGGATGGTTaGCATCTGAATGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQGNRDG*HLNAME
Trigger: TTCCATTGCATTCAGATGTCAACCATCCCGGTTGCC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAAATCAAAGTAACGCTTaGTGGGAAAAGTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKNQSNA*WEKLAP
Trigger: TGGGGCCAACTTTTCCCATCAAGCGTTACTTTGATT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGAACGGGCCAAAGGATaGCGGGCAACACAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVERAKG*RATQGK
Trigger: TTTCCCCTGTGTTGCCCGTCATCCTTTGGCCCGTTC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCTCTCATGCTTCTGCTaGTATTCTCTCTCATGTCAA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMLSCFC*YSLSCQ
Trigger: TTGACATGAGAGAGAATATCAGCAGAAGCATGAGAG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGCCCAGGCAGTTCCTaGCTCACAACTGCTTGGATA +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQCPGSS*LTTAWI
Trigger: TATCCAAGCAGTTGTGAGTCAGGAACTGCCTGGGCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACATGCTGCTTTCATGCTaGTGGACAGGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHMLLSC*WTGGKR
Trigger: CCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCAT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQVGQSC*FHAAGQ
Trigger: CTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGAC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCTGGGGGCTTCTCCTaGGGTCGGCCAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSGGFS*GRPIML
Trigger: CAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGCTGTTGCCCGGCTTaGTGCTGTTGCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRCCPA*CCCCGG
Trigger: CCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGATTGAACCCTGCCGCTaGTGCAGCTGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVIEPCR*CSCSCC
Trigger: GCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAAT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVPPGF*FPEGMA
Trigger: TGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCTCGCCGCTGGTGGTaGTGTGAGAGGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSRRWW*CERVSS
Trigger: AGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGCTGAAACACAGCTCTaGCACCCACAACTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLAETQL*HPQLGA
Trigger: AGCTCCAAGTTGTGGGTGGCAGAGCTGTGTTTCAGC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCAAAATCCCAGTGAATaGGGTTTCACAGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMQNPSE*GFTVLP
Trigger: TGGAAGTACTGTGAAACCGCATTCACTGGGATTTTG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGCTGCTGGACAGGTaGGAAGAGGAGGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMLLDR*EEEAWS
Trigger: CGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGCAGATGGCTGAGTTaGGGGCCTGGTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRRWLS*GPGSGG
Trigger: GCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTGACCTCCGCAGATaGCTGAGTTGGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLDLRR*LSWGPG
Trigger: ACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTTGACCTCCGCAGATaGCTGAGTTGGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLDLRR*LSWGPG
Trigger: ACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGTCTTGTACAGTTGCTaGTCACCCATGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLVLYSC*SPMLSA
Trigger: GGCAGACAGCATGGGTGACCAGCAACTGTACAAGAC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGTCTTGTACAGTTGCTaGTCACCCATGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQVLYSC*SPMLSA
Trigger: GGCAGACAGCATGGGTGACCAGCAACTGTACAAGAC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGGTTCTCACTACCATaGGCCACATGGTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQRFSLP*ATWLVL
Trigger: CAAGACCAACCATGTGGCCCATGGTAGTGAGAACCT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGAGGTTTCCACGTAGCTaGACATGGTTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQRFPRS*TWFPGP
Trigger: AGGGCCTGGAAACCATGTCCAGCTACGTGGAAACCT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGATTGGTAGCCATCAGTaGGCTCAGCCTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVIGSHQ*AQPGLV
Trigger: CACCAGCCCAGGCTGAGCCCACTGATGGCTACCAAT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTGCTGGGGGCTCCATaGGCTTCTGAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVLGAP*ASETAA
Trigger: AGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGTGGGGCCTGCAGTaGCTGTCCTCCCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLWGLQ*LSSLHW
Trigger: CCAGTGCAGGGAGGACAGCCACTGCAGGCCCCACAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGAGTAGTACTGGGACATaGAGCCCAGGGGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQSSTGT*SPGESA
Trigger: AGCTGATTCCCCTGGGCTCCATGTCCCAGTACTACT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGGCCACATGGCACTaGGAGACAGCTGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGATWH*ETAADA
Trigger: AGCATCAGCAGCTGTCTCCCAGTGCCATGTGGCCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCATCTGGGGCCACATaGCACTGGGAGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGASGAT*HWETAA
Trigger: AGCAGCTGTCTCCCAGTGCCATGTGGCCCCAGATGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPWDRM*PFRAGR
Trigger: CCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGCTCTGGTACAGGGTaGCGCCCGAGTAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGSGTG*RPSRRQ
Trigger: CTGCCTCCTACTCGGGCGCCACCCTGTACCAGAGCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGGCGCCAGGGCCGTaGCCGGAGATGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWAPGP*PEMRTL
Trigger: CAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTTCTCCACTCTTTGCTaGAGGTCATGGTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMFSTLC*RSWFSS
Trigger: ACTAGAAAACCATGACCTCCAGCAAAGAGTGGAGAA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGATTGGTCCCTCCACCTaGCAATGCACTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLIGPST*QCTGTA
Trigger: TGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAAT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPWSPG*CPRGCG
Trigger: CCCGCATCCACGGGGGCACCAACCAGGTGACCAAGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRALVT*LVPPWM
Trigger: CATCCACGGGGGCACCAACCAGGTGACCAAGGCCCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWHLGP*SPGWCP
Trigger: GGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCTTGCAGGGGAAGATaGTGGTGGGGTCTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPCRGR*WWGLSR
Trigger: GCGAGACAGACCCCACCACCATCTTCCCCTGCAAGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACACCTCCCAACTGCTaGACGACGTCGTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTPPNC*TTSSSR
Trigger: CCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGGGAAGAGGAGGCCTaGTCCTGTTTGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQWEEEA*SCLRMK
Trigger: CTTCATCCTCAAACAGGACCAGGCCTCCTCTTCCCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATATGCTGCTGGACAGGTaGGAAGAGGAGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYMLLDR*EEEAWS
Trigger: GGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCAT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGAAAAGGCAACCGGGATaGTTGACATCTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMKRQPG*LTSECN
Trigger: ATTGCATTCAGATGTCAACCATCCCGGTTGCCTTTT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCACTACTCCACGGCTaGCATGTCTGTGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGALLHG*HVCERG
Trigger: GCCACGTTCACAGACATGTCAGCCGTGGAGTAGTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGGCAAACACCTGGGTaGAAGAGTCCAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHWQTPG*KSPACV
Trigger: TACACAAGCTGGACTCTTTCACCCAGGTGTTTGCCA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGCTCCATGGGCTTCTaGGACAGCAGCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGSMGF*DSSWRR
Trigger: TCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGTGCTGCCCGACCTaGAGAGCTGGTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGCCPT*RAGLDS
Trigger: GCTGTCCAAACCAGCTCTTCAGGTCGGGCAGCACCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGTTGCATGTGCTGTaGCAGCATCTGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLLHVL*QHLWGL
Trigger: CAGGCCCCACAGATGCTGTCACAGCACATGCAACAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTGTTGCATGTGCTGTaGCAGCATCTGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLLHVL*QHLWGL
Trigger: CAGGCCCCACAGATGCTGTCACAGCACATGCAACAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGGCGGCTGTGGCTGTaGTGGGCGAATTTGTTGCGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRRLWL*WANLLR
Trigger: CCGCAACAAATTCGCCCATCACAGCCACAGCCGCCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGAGGTATCTGCATTaGACCCTGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLRYLH*TLPLLQ
Trigger: CTGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTGAGGTATCTGCATTaGACCCTGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLRYLH*TLPLLQ
Trigger: CTGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGACCCGGGTCAGATCTaGGCTCGCTGGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDDPGQI*ARWVSH
Trigger: ATGGGAGACCCAGCGAGCTCAGATCTGACCCGGGTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGAGGCCCCATGTTGTTaGGGTGGATCCCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDEAPCC*GGSHWG
Trigger: CCCCCAGTGGGATCCACCTCAACAACATGGGGCCTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGCAGGCAGGTTCTTaGACTCCTTCAGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGQAGS*TPSGRW
Trigger: CCATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGGGATTTCCTGTTTaGGGTTGGGGGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWGFPV*GWGRPS
Trigger: TGAGGGCCTCCCCCAACCTCAAACAGGAAATCCCCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLGTLG*CFLGIS
Trigger: GGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTCCGCCCCAGCCGCATaGTCTTTTTCCACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVSAPAA*SFSTCS
Trigger: ACTACACGTGGAAAAAGATCATGCGGCTGGGGCGGA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATTCACTGTCTCTAAGTaGCACACAGGGCTTTATAGT +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKFTVSK*HTGLYS
Trigger: ACTATAAAGCCCTGTGTGTCACTTAGAGACAGTGAA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTCCTTCCTCCTGTTTaGGGTTGGGGGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLLPPV*GWGRPS
Trigger: TGAGGGCCTCCCCCAACCTCAAACAGGAGGAAGGAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGTCCCTACTGGGAATaGTTTCATGAGAAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSPYWE*FHEKVA
Trigger: GGCTACCTTCTCATGAAATCATTCCCAGTAGGGACT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTCCTCACATGTCGTGTaGGCTGGAGGAGAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYSSHVV*AGGEPC
Trigger: ACACGGCTCTCCTCCAGCTCACACGACATGTGAGGA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGTCCATGGCTTTCCTaGAGTTCAGAGACCACTGTC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHCPWLS*SSETTV
Trigger: GACAGTGGTCTCTGAACTTCAGGAAAGCCATGGACA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVAVGQS*CFHAAG
Trigger: TCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATCTGGGGGCTTCTCCTaGGGTCGGCCAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSGGFS*GRPIML
Trigger: CAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSAPCN*IPIVVV
Trigger: AACCACAACTATGGGAATGCAGTTACAGGGGGCGGA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTCCCCACCCTCCCTaGCTCGAGGTATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLPHPP*LEVSIW
Trigger: CCAAATGGATACCTCGAGGCAGGGAGGGTGGGGAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGGTTTCCAGGCCCTaGATGACTTCCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMVSRP*MTSPPS
Trigger: GGAGGGTGGGGAAGTCATGCAGGGCCTGGAAACCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGGATAGCCGGTaGTGGGGGCTCCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGRDSR*WGLHGL
Trigger: AAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGCATCTGTGGGGCCTaGAGTGGCTGTCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSICGA*SGCPPC
Trigger: GCAGGGAGGACAGCCACTGCAGGCCCCACAGATGCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGCATCTGTTGCATGTaGTGTGACAGCATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQCICCM*CDSICG
Trigger: CCCACAGATGCTGTCACAGCACATGCAACAGATGCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTGCATCTGTTGCATGTaGTGTGACAGCATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHCICCM*CDSICG
Trigger: CCCACAGATGCTGTCACAGCACATGCAACAGATGCA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATTGAACCCTGCCGCTaGTGCAGCTGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIEPCR*CSCSCC
Trigger: GCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTGCTGCTCTTGCAAGTaGTGCATCATGGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVCCSCK*CIMGWG
Trigger: GCCCCAACCCATGATGCAGCACTTGCAAGAGCAGCA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAACTTTTTCTTCTCCTaGACGGTCTTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLNFFFS*TVLRGS
Trigger: GGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACAACTTTTTCTTCTCCTaGACGGTCTTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHNFFFS*TVLRGS
Trigger: GGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGATCGTCGATGATTTCTaGCAGGCGTGTCCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLIVDDF*QACPVF
Trigger: AAACACCGGACACGCCTGGCAGAAATCATCGACGAT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGMAIQ*LSGAEH
Trigger: GTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGTGCCCCCGTGGATaGGGGCATGGCCATTCAGTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWCPRG*GHGHSV
Trigger: CACTGAATGGCCATGCCCGCATCCACGGGGGCACCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVVPPGF*FPEGMA
Trigger: TGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCAC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGACACCTCCCAACTaGTGGACGACGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMTPPN*WTTSSS
Trigger: CGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTCTGCAACAAGTGCATaGGCAATCCGACGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSATSA*AIRRED
Trigger: GTCTTCTCGTCGGATTGCCCATGCACTTGTTGCAGA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCTGAGTTGGGGGCCTaGTTCTGGGGGCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAELGA*FWGLLL
Trigger: CAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCGCAGATGGCTGAGTTaGGGGCCTGGTTCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIRRWLS*GPGSGG
Trigger: GCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATTCACATCCTCTCCCTaGCTGAGGTATAGACCACAC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLFTSSP*LRYRPH
Trigger: GTGTGGTCTATACCTCAGCCAGGGAGAGGATGTGAA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTTCACATCCTCTCCCTaGCTGAGGTATAGACCACAC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQFTSSP*LRYRPH
Trigger: GTGTGGTCTATACCTCAGCCAGGGAGAGGATGTGAA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCATGGGCCACATGGTTaGTCTTGTACAGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLHGPHG*SCTVAG
Trigger: ACCAGCAACTGTACAAGACCAACCATGTGGCCCATG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACTACCATGGGCCACATaGTTGGTCTTGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLLPWAT*LVLYSC
Trigger: GCAACTGTACAAGACCAACCATGTGGCCCATGGTAG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQFGQGF*SQQASP
Trigger: TGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGTCCGGATCTCGCTaGCCTGGGAGTAGGTGTATT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGSGSR*PGSRCI
Trigger: AATACACCTACTCCCAGGCCAGCGAGATCCGGACCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCGCTGGTAAGCTTCTaGGTCCGGATCTCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPLVSF*VRISLA
Trigger: GGCCAGCGAGATCCGGACCCAGAAGCTTACCAGCGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTGGTTGGCAAACACCTaGGTGAAAGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQWLANT*VKESSL
Trigger: CAAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGGGATAGCCGGTGCTaGGGGCTCCATGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRDSRC*GLHGLL
Trigger: CAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCCGACCTGAAGAGCTaGTTTGGACAGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPDLKS*FGQPTS
Trigger: ACTGGTGGGCTGTCCAAACCAGCTCTTCAGGTCGGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCCAGGGGAATCAGCTaGACAGTGTGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPRGIS*TVCACS
Trigger: AGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGTCCTCACGCTGCTaGTGCTGGGACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLSSRC*CWDRWL
Trigger: GAGCCACCTGTCCCAGCACCAGCAGCGTGAGGACAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAGCTCAGCATGGCCTaGGCCTGTCTGTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGELSMA*ACLSLE
Trigger: CTCTAGTGACAGACAGGCCCAGGCCATGCTGAGCTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCAGGTAGGTGCATCTaGGGCCACATGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSGRCI*GHMALG
Trigger: TCCCAGTGCCATGTGGCCCCAGATGCACCTACCTGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCCTCATTCCCCCGTaGGACCGCATGTGGCCATTC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDALIPP*DRMWPF
Trigger: GAATGGCCACATGCGGTCCCACGGGGGAATGAGGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGGCTCCTCGGCTTTaGGCACACTCGGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGAPRL*AHSADA
Trigger: AGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGCCATCGATGCTGTTaGAGCGACACAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCHRCC*SDTAAP
Trigger: GGGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGCCATCGATGCTGTTaGAGCGACACAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYCHRCC*SDTAAP
Trigger: GGGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLLSRP*GDRHVA
Trigger: AGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGACTGAGCCACCGTCTTaGACTTCACCATCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQTEPPS*TSPSSV
Trigger: TACAGAAGATGGTGAAGTCCAAGACGGTGGCTCAGT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPWMRA*PFSACR
Trigger: CCGACAGGCACTGAATGGCCATGCCCGCATCCACGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGTTGGTGCCCCCGTaGATGCGGGCATGGCCATTC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWLVPP*MRAWPF
Trigger: GAATGGCCATGCCCGCATCCACGGGGGCACCAACCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCTTCCCAGAGGGGATaGCACCTCGGGCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDASQRG*HLGPWS
Trigger: TGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLSRRW*CCERVS
Trigger: GCTCACCCTCTCACAGCACCACCAGCGGCGAGACAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGGGGAAGATGGTGGTaGGGTCTGTCTCGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRGRWW*GLSRRW
Trigger: CCAGCGGCGAGACAGACCCCACCACCATCTTCCCCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCAGGGGAAGATGGTaGTGGGGTCTGTCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCRGRW*WGLSRR
Trigger: GCGGCGAGACAGACCCCACCACCATCTTCCCCTGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAAAAAGGCAACCGGGATaGTTGACATCTGAATGCAAT +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKKRQPG*LTSECN
Trigger: ATTGCATTCAGATGTCAACCATCCCGGTTGCCTTTT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAATATTTGCCTCCAGATaGGTCTCTAGTCAGTTCATG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKIFASR*VSSQFM
Trigger: CATGAACTGACTAGAGACCCATCTGGAGGCAAATAT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACGTCGCTCACACCTTaGCCTCCGCAGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTSLTP*PPQMAE
Trigger: CTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCACACAGCACTGTGGTaGGGAGACGTCGCTCACACC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDHTALW*GDVAHT
Trigger: GGTGTGAGCGACGTCTCCTCACCACAGTGCTGTGTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCCCCCACATCATGTTTaGGTTGGCCAGGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYPPHHV*VGQVST
Trigger: CGTGGAAACCTGGCCAACTCAAACATGATGTGGGGG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCCTGGGCCATATTGTTaGCCTGAATTCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQPGPYC*PEFAGF
Trigger: AAAACCTGCGAATTCAGGTCAACAATATGGCCCAGG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCCATCACTGCTGACTaGGTGTGCAGCACCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSITAD*VCSTWA
Trigger: GGCCCAGGTGCTGCACACTCAGTCAGCAGTGATGGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSIHHC*LSVQHL
Trigger: CAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGGCTCCATGGGCTTCTaGGACAGCAGCTGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIGSMGF*DSSWRR
Trigger: TCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTTGGGTTGGCCACTTaGCTCAGGGGACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFGLAT*LRGPWL
Trigger: CAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCCGCCCCAGCCGCATaGTCTTTTTCCACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSAPAA*SFSTCS
Trigger: ACTACACGTGGAAAAAGATCATGCGGCTGGGGCGGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGGTGCTGTGAGAGGGTaGGCTCTTTACCGAACAGTA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVGAVRG*ALYRTV
Trigger: TACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPLVVL*EGELFT
Trigger: GGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGACCCTGAAGCAAGACTaGATCTTGATCATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQTLKQD*ILIIQE
Trigger: CTCTTGGATGATCAAGATTCAGTCTTGCTTCAGGGT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGTGCCTGTCGGGAGCTaGACACAGCCCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIVPVGS*TQPHSW
Trigger: CCAACTGTGGGGCTGTGTTCAGCTCCCGACAGGCAC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLGTLG*CFLGIS
Trigger: CGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAGTCCCTACTGGGAATaGTTTCATGAGAAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSPYWE*FHEKVA
Trigger: GGCTACCTTCTCATGAAATCATTCCCAGTAGGGACT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLECNGT*RSASVP
Trigger: AGGGACTGAAGCTGACCTTCATGTTCCATTGCATTC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTCAATCACCCTGAAGTaGAAGCAGTCCTGGCAACTT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQSITLK*KQSWQL
Trigger: AAGTTGCCAGGACTGCTTTCACTTCAGGGTGATTGA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTCAATCACCCTGAAGTaGAAGCAGTCCTGGCAACTT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHSITLK*KQSWQL
Trigger: AAGTTGCCAGGACTGCTTTCACTTCAGGGTGATTGA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGGGGTGGGCGATGCCTaGAAACACCGGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIGVGDA*KHRPRK
Trigger: TTTCCTGGGCCGGTGTTTTCAGGCATCGCCCACCCC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGTTCGGCCACAAAGTTaGTGCACACTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVVRPQS*CTLPRQ
Trigger: CTGCCTGGGCAGTGTGCATCAACTTTGTGGCCGAAC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACTAATTCAGGAATTTaGACTGTCTCGTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTNSGI*TVSLRR
Trigger: CCTCCTTAACGAGACAGTTCAAATTCCTGAATTAGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAVGQS*CFHAAG
Trigger: TCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCTGGGGGCTTCTCCTaGGGTCGGCCAATCATGCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSGGFS*GRPIML
Trigger: CAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGGAGATACGCTGTTaGCCGGCTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMEIRC*PACCCC
Trigger: GCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTGCTGCTGCTGCTCTTaGAAGTGCTGCATCATGGGT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVCCCCS*KCCIMG
Trigger: ACCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTGCATCTGTTGCTGCTaGTGCTCTTGCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVCICCC*CSCKCC
Trigger: GCAGCACTTGCAAGAGCAGCAGCAGCAACAGATGCA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGQLDSV*LLWGIL
Trigger: CAGTATACCCCAGAGCAGGCACACACTGTCCAGCTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGAGGTTCCGGCCGGTaGCGGAACTTTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRGSGR*RNFFFS
Trigger: GGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCAACATCTACAGTCTaGTCTCCAGGCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSTSTV*SPGPGV
Trigger: CACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVPPGF*FPEGMA
Trigger: TGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCTCGCCGCTGGTGGTaGTGTGAGAGGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSRRWW*CERVSS
Trigger: AGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTTGCCACACTCCTTaGAGGGGAAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLCHTP*RGRWWW
Trigger: CCACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGATGCCATGCTCACTaGAAACTATGGAATGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQRCHAH*KLWNEV
Trigger: GACCTCATTCCATAGTTTGCAGTGAGCATGGCATCT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCAGGCAAAGATGCCATaGTCACTGCAAACTATGGAA +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQQAKMP*SLQTME
Trigger: TTCCATAGTTTGCAGTGAGCATGGCATCTTTGCCTG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCACAGCCAGGGCCTTaGCTGTTTCTGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPQPGP*LFLQQV
Trigger: CACTTGTTGCAGAAACAGCCAAGGCCCTGGCTGTGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGCTGCTGGACAGGTaGGAAGAGGAGGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMLLDR*EEEAWS
Trigger: CGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTGACCTCCGCAGATaGCTGAGTTGGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLDLRR*LSWGPG
Trigger: ACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCAGGTGTTCCTGTTaGCCTGTACCACTCATGTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGARCSC*PVPLMC
Trigger: GCACATGAGTGGTACAGGCCAACAGGAACACCTGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTCTGTGAACGTGGCTaGAGCCAGGTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVCERG*SQVFLL
Trigger: CAACAGGAACACCTGGCTCCAGCCACGTTCACAGAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGTCTGTGAACGTGGCTaGAGCCAGGTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYVCERG*SQVFLL
Trigger: CAACAGGAACACCTGGCTCCAGCCACGTTCACAGAC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVAVDAK*WLLVEK
Trigger: CTTTTCTACCAACAGCCACCACTTGGCGTCCACAGC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGACATCATGTTTGAGTTaGCCAGGTTTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQTSCLS*PGFHVA
Trigger: AGCTACGTGGAAACCTGGCCAACTCAAACATGATGT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTGCTGGGGGCTCCATaGGCTTCTGAGACAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVLGAP*ASETAA
Trigger: AGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGCTGTTGCTGCGGTaGGTAATACTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLLLLR*VILVLL
Trigger: CAGCAGCACCAGTATTACCCACCGCAGCAACAGCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTGCTGTTGCTGCGGTaGGTAATACTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLLLLR*VILVLL
Trigger: CAGCAGCACCAGTATTACCCACCGCAGCAACAGCAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACCCAGGGGAATCAGCTaGACAGTGTGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVPRGIS*TVCACS
Trigger: AGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTGTCCTCACGCTGCTaGTGCTGGGACAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILSSRC*CWDRWL
Trigger: GAGCCACCTGTCCCAGCACCAGCAGCGTGAGGACAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCCATGTTGTTGAGGTaGATCCCACTGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPMLLR*IPLGDR
Trigger: CCTATCCCCCAGTGGGATCCACCTCAACAACATGGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGGCCACATGGCACTaGGAGACAGCTGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGATWH*ETAADA
Trigger: AGCATCAGCAGCTGTCTCCCAGTGCCATGTGGCCCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCATCTGGGGCCACATaGCACTGGGAGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDASGAT*HWETAA
Trigger: AGCAGCTGTCTCCCAGTGCCATGTGGCCCCAGATGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATCAGGTAGGTGCATCTaGGGCCACATGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSGRCI*GHMALG
Trigger: TCCCAGTGCCATGTGGCCCCAGATGCACCTACCTGA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAACGCTCCTTTGGGTTaGCCACTTGACTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGNAPLG*PLDSGD
Trigger: GTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCCCAAACGCTCCTTTaGGTTGGCCACTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPQTLL*VGHLTQ
Trigger: CTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCCCCAAACGCTCCTTTaGGTTGGCCACTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYPQTLL*VGHLTQ
Trigger: CTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGALCVS*ARAEIS
Trigger: AGATATCTCTGCCCTGGCCCAGGACACACACAAGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCTTCCATACCAGTGTaGCCTTGTGTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGASIPV*PCVCPG
Trigger: CCCAGGACACACACAAGGCCACACTGGTATGGAAGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCTTTGCTGGAGGTCATaGTTTTCTAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQLCWRS*FSSSGQ
Trigger: CTGGCCAGAACTAGAAAACCATGACCTCCAGCAAAG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGGGAGCTGAACACCTaGGGAAGAAAGGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRELNT*GRKGVT
Trigger: TGTCACTCCCTTTCTTCCCCAGGTGTTCAGCTCCCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGCTTCCCAGAGGGGATaGCACCTCGGGCCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIASQRG*HLGPWS
Trigger: TGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACACCTCCCAACTGCTaGACGACGTCGTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTPPNC*TTSSSR
Trigger: CCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACACTCACAGCAAGCTTTaGGATAAAAGGCAACCGGGA +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHTHSKL*DKRQPG
Trigger: TCCCGGTTGCCTTTTATCCCAAAGCTTGCTGTGAGT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGCTTGCTTTGCCCCTaGAAAGCTGCCCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGLLCP*KAAPSI
Trigger: TATGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGAGGGCAGTAGTCCCTaGGAGAGACGATCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVEGSSP*ERRSAK
Trigger: CTTGGCTGATCGTCTCTCCCAGGGACTACTGCCCTC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCACTACTCCACGGCTaGCATGTCTGTGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDALLHG*HVCERG
Trigger: GCCACGTTCACAGACATGTCAGCCGTGGAGTAGTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGTTGCATGTGCTGTaGCAGCATCTGTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLLHVL*QHLWGL
Trigger: CAGGCCCCACAGATGCTGTCACAGCACATGCAACAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGAGGTATCTGCATTaGACCCTGCCGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLRYLH*TLPLLQ
Trigger: CTGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGGGATTTCCTGTTTaGGGTTGGGGGAGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWGFPV*GWGRPS
Trigger: TGAGGGCCTCCCCCAACCTCAAACAGGAAATCCCCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLGTLG*CFLGIS
Trigger: GGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCACACAATCGTCGATaGTTTCTGCCAGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSHNRR*FLPGVS
Trigger: GGACACGCCTGGCAGAAATCATCGACGATTGTGTGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGGCATTTCACAGATaGAGGAGCCTGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWAFHR*RSLRAG
Trigger: GCCAGCCCTCAGGCTCCTTCATCTGTGAAATGCCCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGTGCTGTGAGAGGGTaGGCTCTTTACCGAACAGTA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGAVRG*ALYRTV
Trigger: TACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCAAAAGCCGCCTTCTaGGCCTTTTGCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAKAAF*AFCLCC
Trigger: ACAACAGAGGCAAAAGGCTCAGAAGGCGGCTTTTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAACCCTGAAGCAAGACTaGATCTTGATCATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLTLKQD*ILIIQE
Trigger: CTCTTGGATGATCAAGATTCAGTCTTGCTTCAGGGT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGAATCAAAGTAACGCTTaGTGGGAAAAGTTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQNQSNA*WEKLAP
Trigger: TGGGGCCAACTTTTCCCATCAAGCGTTACTTTGATT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTAGTCAGTTCATGCTaGAACACAGCTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLVSSC*NTALPP
Trigger: GGGTGGCAGAGCTGTGTTTCAGCATGAACTGACTAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGTCCTTCAATCACCCTaGAGTGAAAGCAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYVLQSP*SESSPG
Trigger: GCCAGGACTGCTTTCACTTCAGGGTGATTGAAGGAC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGCTGCTTTCATGCTaGTGGACAGGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMLLSC*WTGGKR
Trigger: CCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVGQSC*FHAAGQ
Trigger: CTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVSAPCN*IPIVVV
Trigger: AACCACAACTATGGGAATGCAGTTACAGGGGGCGGA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTCCCCACCCTCCCTaGCTCGAGGTATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLPHPP*LEVSIW
Trigger: CCAAATGGATACCTCGAGGCAGGGAGGGTGGGGAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRICCG*VCISCM
Trigger: CATGCAAGAAATACAGACGCAGCCGCAACAAATTCG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTGAACCCTGCCGCTaGTGCAGCTGTAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIEPCR*CSCSCC
Trigger: GCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATGCTGCTCTTGCAAGTaGTGCATCATGGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVCCSCK*CIMGWG
Trigger: GCCCCAACCCATGATGCAGCACTTGCAAGAGCAGCA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGCTGCTGCTGCTCTTaGAAGTGCTGCATCATGGGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCCCCS*KCCIMG
Trigger: ACCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGAGTTCAGGGATTTCTaGTTGGAATCTCAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQEFRDF*LESQAN
Trigger: ATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCCCTCCACCTGGCAATaGACTGGAACAGCACAAATT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVPSTWQ*TGTAQI
Trigger: AATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGMAIQ*LSGAEH
Trigger: GTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTCTCGCCGCTGGTGGTaGTGTGAGAGGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYISRRWW*CERVSS
Trigger: AGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCTCTCAATCGTGGCTaGCATCTCAGCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPLNRG*HLSCKS
Trigger: GCTTTTGCAGCTGAGATGGCAGCCACGATTGAGAGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGACACCTCCCAACTaGTGGACGACGTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMTPPN*WTTSSS
Trigger: CGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGTAACACGAGGGCTTaGTTTGCCCCTGGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCNTRA*FAPGKL
Trigger: CAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAATGGACCAAGGGACTTaGATTCCGGGAAAATACAGT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLMDQGT*IPGKYS
Trigger: ACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCAT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAVDAK*WLLVEK
Trigger: CTTTTCTACCAACAGCCACCACTTGGCGTCCACAGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGTTTCCACGTAGCTaGACATGGTTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRFPRS*TWFPGP
Trigger: AGGGCCTGGAAACCATGTCCAGCTACGTGGAAACCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGACATCATGTTTGAGTTaGCCAGGTTTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQTSCLS*PGFHVA
Trigger: AGCTACGTGGAAACCTGGCCAACTCAAACATGATGT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTGGTAGCCATCAGTaGGCTCAGCCTGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIGSHQ*AQPGLV
Trigger: CACCAGCCCAGGCTGAGCCCACTGATGGCTACCAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGTCCGGATCTCGCTaGCCTGGGAGTAGGTGTATT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGSGSR*PGSRCI
Trigger: AATACACCTACTCCCAGGCCAGCGAGATCCGGACCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCGACCTGAAGAGCTaGTTTGGACAGCCCACCAGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPDLKS*FGQPTS
Trigger: ACTGGTGGGCTGTCCAAACCAGCTCTTCAGGTCGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCAGGGGAATCAGCTaGACAGTGTGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPRGIS*TVCACS
Trigger: AGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGAGCTCAGCATGGCCTaGGCCTGTCTGTCACTAGAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDELSMA*ACLSLE
Trigger: CTCTAGTGACAGACAGGCCCAGGCCATGCTGAGCTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGCATCTGGGGCCACATaGCACTGGGAGACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIASGAT*HWETAA
Trigger: AGCAGCTGTCTCCCAGTGCCATGTGGCCCCAGATGC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCAGGTAGGTGCATCTaGGGCCACATGGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSGRCI*GHMALG
Trigger: TCCCAGTGCCATGTGGCCCCAGATGCACCTACCTGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCCATCGATGCTGTTaGAGCGACACAGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCHRCC*SDTAAP
Trigger: GGGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATTGGTCCCTCCACCTaGCAATGCACTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIGPST*QCTGTA
Trigger: TGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGAACCAGCATACCTaGGGTGGGCGATGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGNQHT*GGRCLK
Trigger: TTTCAGGCATCGCCCACCCCAGGTATGCTGGTTCCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATAGGCACACCTACGTaGAGCTGGGAACCAGCATAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIGTPT*SWEPAY
Trigger: GTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTGGTAGCCATCAGTaGGCTCAGCCCGCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIGSHQ*AQPAVD
Trigger: GTCCACAGCGGGCTGAGCCCACTGATGGCTACCAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372917.8
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCGGCTGATGCTTCCTaGGGATTTCAGCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSADAS*GFQQAC
Trigger: GCACGCCTGCTGAAATCCCCAGGAAGCATCAGCCGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGAAACCCTGAGAAGCTaGGAGAAAAGTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVETLRS*EKSVST
Trigger: AGTGCTGACACTTTTCTCTCAGCTTCTCAGGGTTTC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCCCACATCATGTTTaGGTTGGCCAGGTTTCCACG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPPHHV*VGQVST
Trigger: CGTGGAAACCTGGCCAACTCAAACATGATGTGGGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGGCAAACACCTGGGTaGAAGAGTCCAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGWQTPG*KSPACV
Trigger: TACACAAGCTGGACTCTTTCACCCAGGTGTTTGCCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSIHHC*LSVQHL
Trigger: CAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVDDILT*QASAVA
Trigger: TGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCCGCCCCAGCCGCATaGTCTTTTTCCACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSAPAA*SFSTCS
Trigger: ACTACACGTGGAAAAAGATCATGCGGCTGGGGCGGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGAAAGGGAGTGACATaGCATCTACAGTCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRKGVT*HLQSAP
Trigger: TGGGGCTGACTGTAGATGTCATGTCACTCCCTTTCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCAGTCCAGGTTTCCTaGTTAATGAAGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAVQVS*LMKMEA
Trigger: GGCCTCCATCTTCATTAATCAGGAAACCTGGACTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAAACAGCAACCCTGCTaGCAGGGACAGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDKQQPC*QGQEEA
Trigger: TGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTTCAGGGTCGTCCTaGTTCTGCGTCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLSGSS*FCVFFL
Trigger: AAGGAAGAAGACGCAGAAGCAGGACGACCCTGAAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAVGQS*CFHAAG
Trigger: TCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSAPCN*IPIVVV
Trigger: AACCACAACTATGGGAATGCAGTTACAGGGGGCGGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTTCCCCACCCTCCCTaGCTCGAGGTATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILPHPP*LEVSIW
Trigger: CCAAATGGATACCTCGAGGCAGGGAGGGTGGGGAAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGCATCTGTTGCATGTaGTGTGACAGCATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCICCM*CDSICG
Trigger: CCCACAGATGCTGTCACAGCACATGCAACAGATGCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGGAGATACGCTGTTaGCCGGCTTGCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMEIRC*PACCCC
Trigger: GCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCTGCTCTTGCAAGTaGTGCATCATGGGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCCSCK*CIMGWG
Trigger: GCCCCAACCCATGATGCAGCACTTGCAAGAGCAGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDQLDSV*LLWGIL
Trigger: CAGTATACCCCAGAGCAGGCACACACTGTCCAGCTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGAGGTTCCGGCCGGTaGCGGAACTTTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRGSGR*RNFFFS
Trigger: GGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCAACATCTACAGTCTaGTCTCCAGGCCCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSTSTV*SPGPGV
Trigger: CACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGAGATTCTCCACTCTTTaGTGGAGGTCATGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQRFSTL*WRSWFS
Trigger: AGAAAACCATGACCTCCAGCAAAGAGTGGAGAATCT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACAGATTCTCCACTCTTTaGTGGAGGTCATGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHRFSTL*WRSWFS
Trigger: AGAAAACCATGACCTCCAGCAAAGAGTGGAGAATCT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATCGTCGATGATTTCTaGCAGGCGTGTCCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIVDDF*QACPVF
Trigger: AAACACCGGACACGCCTGGCAGAAATCATCGACGAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTTGCCACACTCCTTaGAGGGGAAGATGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLCHTP*RGRWWW
Trigger: CCACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAACTAAGAGGGTCGCCTaGGTCTCACACACACACACT +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVTKRVA*VSHTHT
Trigger: AGTGTGTGTGTGTGAGACGCAGGCGACCCTCTTAGT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCTGCAACAAGTGCATaGGCAATCCGACGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSATSA*AIRRED
Trigger: GTCTTCTCGTCGGATTGCCCATGCACTTGTTGCAGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCACAGCCAGGGCCTTaGCTGTTTCTGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPQPGP*LFLQQV
Trigger: CACTTGTTGCAGAAACAGCCAAGGCCCTGGCTGTGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCTTTCATGCTGCTaGACAGGTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLLSCC*TGGKRR
Trigger: CCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCACATCCTCTCCCTaGCTGAGGTATAGACCACAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFTSSP*LRYRPH
Trigger: GTGTGGTCTATACCTCAGCCAGGGAGAGGATGTGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCAGGTGTTCCTGTTaGCCTGTACCACTCATGTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDARCSC*PVPLMC
Trigger: GCACATGAGTGGTACAGGCCAACAGGAACACCTGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTCTGTGAACGTGGCTaGAGCCAGGTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVCERG*SQVFLL
Trigger: CAACAGGAACACCTGGCTCCAGCCACGTTCACAGAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACATGGGCCACATGGTTaGTCTTGTACAGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHGPHG*SCTVAG
Trigger: ACCAGCAACTGTACAAGACCAACCATGTGGCCCATG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTACCATGGGCCACATaGTTGGTCTTGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLPWAT*LVLYSC
Trigger: GCAACTGTACAAGACCAACCATGTGGCCCATGGTAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGTTCTCACTACCATaGGCCACATGGTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRFSLP*ATWLVL
Trigger: CAAGACCAACCATGTGGCCCATGGTAGTGAGAACCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVAVDAK*WLLVEK
Trigger: CTTTTCTACCAACAGCCACCACTTGGCGTCCACAGC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFGQGF*SQQASP
Trigger: TGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGGTTGGCAAACACCTaGGTGAAAGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYWLANT*VKESSL
Trigger: CAAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCTGTTGCTGCGGTaGGTAATACTGGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLLLLR*VILVLL
Trigger: CAGCAGCACCAGTATTACCCACCGCAGCAACAGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCATGTTGTTGAGGTaGATCCCACTGGGGGATAGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPMLLR*IPLGDR
Trigger: CCTATCCCCCAGTGGGATCCACCTCAACAACATGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAACGCTCCTTTGGGTTaGCCACTTGACTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDNAPLG*PLDSGD
Trigger: GTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCCAAACGCTCCTTTaGGTTGGCCACTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPQTLL*VGHLTQ
Trigger: CTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTCAGGGATTTCTGCTTaGAATCTCAAGCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSGISA*NLKPML
Trigger: CAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDALCVS*ARAEIS
Trigger: AGATATCTCTGCCCTGGCCCAGGACACACACAAGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCTTCCATACCAGTGTaGCCTTGTGTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDASIPV*PCVCPG
Trigger: CCCAGGACACACACAAGGCCACACTGGTATGGAAGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATGGGAAGAGGAGGCCTaGTCCTGTTTGAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVWEEEA*SCLRMK
Trigger: CTTCATCCTCAAACAGGACCAGGCCTCCTCTTCCCA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCTCACTGCAAACTATaGAATGAGGTCAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHAHCKL*NEVRTE
Trigger: TTCTGTTCTGACCTCATTCCATAGTTTGCAGTGAGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGCTTGCTTTGCCCCTaGAAAGCTGCCCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGLLCP*KAAPSI
Trigger: TATGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGACCTGTTTTCACATTTaGTCATCTCCTCACATGTCG +
Preference number: 4 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLTCFHI*SSPHMS
Trigger: CGACATGTGAGGAGATGACCAAATGTGAAAACAGGT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTACACCTACGTGGAGCTaGGAACCAGCATACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYITPTWS*EPAYLG
Trigger: CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCCCTCAGACACTAAGTaGAGGGCAGTAGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIPSDTK*RAVVPG
Trigger: CCCAGGGACTACTGCCCTCCACTTAGTGTCTGAGGG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAAACCCTGAGAAGCTaGGAGAAAAGTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGETLRS*EKSVST
Trigger: AGTGCTGACACTTTTCTCTCAGCTTCTCAGGGTTTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGAAACCCTGAGAAGCTaGGAGAAAAGTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYETLRS*EKSVST
Trigger: AGTGCTGACACTTTTCTCTCAGCTTCTCAGGGTTTC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGTCTGCCTTGGTTGTaGACGTCCAGCCACAAAACC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCLPWL*TSSHKT
Trigger: GGTTTTGTGGCTGGACGTTCACAACCAAGGCAGACA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCTGGGCCATATTGTTaGCCTGAATTCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPGPYC*PEFAGF
Trigger: AAAACCTGCGAATTCAGGTCAACAATATGGCCCAGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGDDILT*QASAVA
Trigger: TGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTCCGCCCCAGCCGCATaGTCTTTTTCCACGTGTAGT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYISAPAA*SFSTCS
Trigger: ACTACACGTGGAAAAAGATCATGCGGCTGGGGCGGA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCACACAATCGTCGATaGTTTCTGCCAGGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSHNRR*FLPGVS
Trigger: GGACACGCCTGGCAGAAATCATCGACGATTGTGTGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGTGCTGTGAGAGGGTaGGCTCTTTACCGAACAGTA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGAVRG*ALYRTV
Trigger: TACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCAAAAGCCGCCTTCTaGGCCTTTTGCCTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAKAAF*AFCLCC
Trigger: ACAACAGAGGCAAAAGGCTCAGAAGGCGGCTTTTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGAATGCAATGGAACATaGAGGTCAGCTTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYECNGT*RSASVP
Trigger: AGGGACTGAAGCTGACCTTCATGTTCCATTGCATTC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGGCAACCGGGATGGTTaGCATCTGAATGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVGNRDG*HLNAME
Trigger: TTCCATTGCATTCAGATGTCAACCATCCCGGTTGCC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTAGTCAGTTCATGCTaGAACACAGCTCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLVSSC*NTALPP
Trigger: GGGTGGCAGAGCTGTGTTTCAGCATGAACTGACTAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTCCTTCAATCACCCTaGAGTGAAAGCAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVLQSP*SESSPG
Trigger: GCCAGGACTGCTTTCACTTCAGGGTGATTGAAGGAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACCCTGGTTCCCTTTTTaGAGAAGCATTGTGATAATT +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLPWFPF*RSIVII
Trigger: AATTATCACAATGCTTCTTCAAAAAGGGAACCAGGG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGTTTCTGCAACAAGTaGATGGGCAATCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCFCNK*MGNPTR
Trigger: TCTCGTCGGATTGCCCATGCACTTGTTGCAGAAACA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGTCGTCCTGCTTCTaGGTCTTCTTCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGSSCF*VFFLQH
Trigger: ATGCTGAAGGAAGAAGACGCAGAAGCAGGACGACCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTTTCAGGGTCGTCCTaGTTCTGCGTCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLSGSS*FCVFFL
Trigger: AAGGAAGAAGACGCAGAAGCAGGACGACCCTGAAAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGAGGCCTGGTCGACTaGTTTGCTGTAAAATATTCC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGGLVD*FAVKYS
Trigger: GGAATATTTTACAGCAAAGCAGTCGACCAGGCCTCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGCTGCTTTCATGCTaGTGGACAGGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMLLSC*WTGGKR
Trigger: CCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVGQSC*FHAAGQ
Trigger: CTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIAVGQS*CFHAAG
Trigger: TCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGATGGGCGAATTTGTTaGGGCTGCGTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYDGRIC*GCVCIS
Trigger: AGAAATACAGACGCAGCCGCAACAAATTCGCCCATC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCTGCTGCTGCTCTTaGAAGTGCTGCATCATGGGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCCCCS*KCCIMG
Trigger: ACCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCATCTGTTGCTGCTaGTGCTCTTGCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCICCC*CSCKCC
Trigger: GCAGCACTTGCAAGAGCAGCAGCAGCAACAGATGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCAGGTGCATCTGTTaGTGCTGCTGCTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCRCIC*CCCSCK
Trigger: CTTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIQLDSV*LLWGIL
Trigger: CAGTATACCCCAGAGCAGGCACACACTGTCCAGCTG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCTTGGCATCAAACTaGTCCCCAAACGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFLASN*SPNAPL
Trigger: CAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCTCTCAATCGTGGCTaGCATCTCAGCTGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPLNRG*HLSCKS
Trigger: GCTTTTGCAGCTGAGATGGCAGCCACGATTGAGAGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCAGGCAAAGATGCCATaGTCACTGCAAACTATGGAA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVQAKMP*SLQTME
Trigger: TTCCATAGTTTGCAGTGAGCATGGCATCTTTGCCTG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCTGATATGGAAGGCATaGAATTCATCTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQLIWKA*NSSAEN
Trigger: ATTCTCAGCAGATGAATTGCATGCCTTCCATATCAG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTGCTTTCATGCTGCTaGACAGGTGGGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILLSCC*TGGKRR
Trigger: CCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTGTCTGTGAACGTGGCTaGAGCCAGGTGTTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIVCERG*SQVFLL
Trigger: CAACAGGAACACCTGGCTCCAGCCACGTTCACAGAC...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTCTTGTACAGTTGCTaGTCACCCATGCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVLYSC*SPMLSA
Trigger: GGCAGACAGCATGGGTGACCAGCAACTGTACAAGAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTACCATGGGCCACATaGTTGGTCTTGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLPWAT*LVLYSC
Trigger: GCAACTGTACAAGACCAACCATGTGGCCCATGGTAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAVDAK*WLLVEK
Trigger: CTTTTCTACCAACAGCCACCACTTGGCGTCCACAGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTCGAGGTATCCATTTaGCCAAGGTTTTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLEVSI*PRFLEP
Trigger: TGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGGTTTCCACGTAGCTaGACATGGTTTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRFPRS*TWFPGP
Trigger: AGGGCCTGGAAACCATGTCCAGCTACGTGGAAACCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATCTGTATTTCTTGCATaGAGATACGCTGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSVFLA*RYAVAR
Trigger: CCGGGCAACAGCGTATCTCCATGCAAGAAATACAGA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTCTGTATTTCTTGCATaGAGATACGCTGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYSVFLA*RYAVAR
Trigger: CCGGGCAACAGCGTATCTCCATGCAAGAAATACAGA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCAAGTGCTGCATCATaGGTTGGGGCTGATAATACT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGASAAS*VGADNT
Trigger: AGTATTATCAGCCCCAACCCATGATGCAGCACTTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGTAGTACTGGGACATaGAGCCCAGGGGAATCAGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSSTGT*SPGESA
Trigger: AGCTGATTCCCCTGGGCTCCATGTCCCAGTACTACT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCCCCAAACGCTCCTTTaGGTTGGCCACTTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIPQTLL*VGHLTQ
Trigger: CTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACTCCTTCAGGCAGATaGAGCATGTCAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTPSGR*SMSACS
Trigger: AGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTTGCTGGAGGTCATaGTTTTCTAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLCWRS*FSSSGQ
Trigger: CTGGCCAGAACTAGAAAACCATGACCTCCAGCAAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTGGTCCCTCCACCTaGCAATGCACTGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIGPST*QCTGTA
Trigger: TGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACTGAGCCACCGTCTTaGACTTCACCATCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTEPPS*TSPSSV
Trigger: TACAGAAGATGGTGAAGTCCAAGACGGTGGCTCAGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGAGCAGAGCAAAGTCATaGAGGTTGGAGAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVSRAKS*RLEKSR
Trigger: TCTAGACTTCTCCAACCTCCATGACTTTGCTCTGCT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCATAGTGCTTTAATATaGACCAAGGGACTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQHSALI*TKGLAF
Trigger: GAATGCAAGTCCCTTGGTCCATATTAAAGCACTATG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGCAAACACCTGGGTaGAAGAGTCCAGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWQTPG*KSPACV
Trigger: TACACAAGCTGGACTCTTTCACCCAGGTGTTTGCCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCATATTGTTGACCTaGATTCGCAGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAILLT*IRRFWL
Trigger: CAACCAAAACCTGCGAATTCAGGTCAACAATATGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACCCTGAAGCAAGACTaGATCTTGATCATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTLKQD*ILIIQE
Trigger: CTCTTGGATGATCAAGATTCAGTCTTGCTTCAGGGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCAGTCCAGGTTTCCTaGTTAATGAAGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAVQVS*LMKMEA
Trigger: GGCCTCCATCTTCATTAATCAGGAAACCTGGACTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCTCTCATGCTTCTGCTaGTATTCTCTCTCATGTCAA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVLSCFC*YSLSCQ
Trigger: TTGACATGAGAGAGAATATCAGCAGAAGCATGAGAG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATGTTTCTGCAACAAGTaGATGGGCAATCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVCFCNK*MGNPTR
Trigger: TCTCGTCGGATTGCCCATGCACTTGTTGCAGAAACA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTTCAGGGTCGTCCTaGTTCTGCGTCTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLSGSS*FCVFFL
Trigger: AAGGAAGAAGACGCAGAAGCAGGACGACCCTGAAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATGCTGCTTTCATGCTaGTGGACAGGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIMLLSC*WTGGKR
Trigger: CCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATCATGCTGCTTTCATaGTGCTGGACAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIMLLS*CWTGGK
Trigger: CTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSAPCN*IPIVVV
Trigger: AACCACAACTATGGGAATGCAGTTACAGGGGGCGGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGCATCTGTTGCATGTaGTGTGACAGCATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCICCM*CDSICG
Trigger: CCCACAGATGCTGTCACAGCACATGCAACAGATGCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGCGTCTGTATTTCTTaGATGGAGATACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCVCIS*MEIRCC
Trigger: GCAACAGCGTATCTCCATGCAAGAAATACAGACGCA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGCGTCTGTATTTCTTaGATGGAGATACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYCVCIS*MEIRCC
Trigger: GCAACAGCGTATCTCCATGCAAGAAATACAGACGCA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRICCG*VCISCM
Trigger: CATGCAAGAAATACAGACGCAGCCGCAACAAATTCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAACTTTTTCTTCTCCTaGACGGTCTTGAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDNFFFS*TVLRGS
Trigger: GGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCTCCACCTGGCAATaGACTGGAACAGCACAAATT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPSTWQ*TGTAQI
Trigger: AATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATCTCCAGGCAAAGATaGCATGCTCACTGCAAACTA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGISRQR*HAHCKL
Trigger: TAGTTTGCAGTGAGCATGGCATCTTTGCCTGGAGAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATCTCCATTTGATGAATaGCCATCTATAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLSPFDE*PSIGTV
Trigger: TACAGTTCCTATAGATGGGCATTCATCAAATGGAGA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCTGCAACAAGTGCATaGGCAATCCGACGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSATSA*AIRRED
Trigger: GTCTTCTCGTCGGATTGCCCATGCACTTGTTGCAGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCACATCCTCTCCCTaGCTGAGGTATAGACCACAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFTSSP*LRYRPH
Trigger: GTGTGGTCTATACCTCAGCCAGGGAGAGGATGTGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTACCATGGGCCACATaGTTGGTCTTGTACAGTTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLPWAT*LVLYSC
Trigger: GCAACTGTACAAGACCAACCATGTGGCCCATGGTAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGGTTCTCACTACCATaGGCCACATGGTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRFSLP*ATWLVL
Trigger: CAAGACCAACCATGTGGCCCATGGTAGTGAGAACCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFGQGF*SQQASP
Trigger: TGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGGTTGGCAAACACCTaGGTGAAAGAGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDWLANT*VKESSL
Trigger: CAAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCAATGTTGATGCGTaGTTCAACATCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGANVDA*FNIYSL
Trigger: CAGACTGTAGATGTTGAACCACGCATCAACATTGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTTTGCTGGAGGTCATaGTTTTCTAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLCWRS*FSSSGQ
Trigger: CTGGCCAGAACTAGAAAACCATGACCTCCAGCAAAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACACCTGGCAATGCACTaGAACAGCACAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHLAMH*NSTNSE
Trigger: TTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCAAAGTCATGGAGGTTaGAGAAGTCTAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVQSHGG*RSLEVL
Trigger: AAGCACTTCTAGACTTCTCCAACCTCCATGACTTTG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGAAACCCTGAGAAGCTaGGAGAAAAGTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDETLRS*EKSVST
Trigger: AGTGCTGACACTTTTCTCTCAGCTTCTCAGGGTTTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCTGGGCCATATTGTTaGCCTGAATTCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPGPYC*PEFAGF
Trigger: AAAACCTGCGAATTCAGGTCAACAATATGGCCCAGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDDDILT*QASAVA
Trigger: TGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCACTGTCTCTAAGTaGCACACAGGGCTTTATAGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFTVSK*HTGLYS
Trigger: ACTATAAAGCCCTGTGTGTCACTTAGAGACAGTGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTGGGAATGATTTCATaGGAAGGTAGCCCAGATGAA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLGMIS*EGSPDE
Trigger: TTCATCTGGGCTACCTTCTCATGAAATCATTCCCAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGTTTCTGCAACAAGTaGATGGGCAATCCGACGAGA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCFCNK*MGNPTR
Trigger: TCTCGTCGGATTGCCCATGCACTTGTTGCAGAAACA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCTGGTCGACTGCTTTaGTGTAAAATATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPGRLL*CKIFQH
Trigger: GTGTTGGAATATTTTACAGCAAAGCAGTCGACCAGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGCCTGGTCGACTaGTTTGCTGTAAAATATTCC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGGLVD*FAVKYS
Trigger: GGAATATTTTACAGCAAAGCAGTCGACCAGGCCTCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGATGGGCGAATTTGTTaGGGCTGCGTCTGTATTTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDDGRIC*GCVCIS
Trigger: AGAAATACAGACGCAGCCGCAACAAATTCGCCCATC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCTTGGCATCAAACTaGTCCCCAAACGCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFLASN*SPNAPL
Trigger: CAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGAGTTCAGGGATTTCTaGTTGGAATCTCAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGEFRDF*LESQAN
Trigger: ATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGATTCTCCACTCTTTaGTGGAGGTCATGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRFSTL*WRSWFS
Trigger: AGAAAACCATGACCTCCAGCAAAGAGTGGAGAATCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATCGTCGATGATTTCTaGCAGGCGTGTCCGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIIVDDF*QACPVF
Trigger: AAACACCGGACACGCCTGGCAGAAATCATCGACGAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAAGATGCCATGCTCACTaGAAACTATGGAATGAGGTC +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVRCHAH*KLWNEV
Trigger: GACCTCATTCCATAGTTTGCAGTGAGCATGGCATCT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTTTGTTGGCCTTCAATaGTATTTGTCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHFVGLQ*YLSCIC
Trigger: GCAAATACAAGACAAATAGCATTGAAGGCCAACAAA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTCGAGGTATCCATTTaGCCAAGGTTTTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLEVSI*PRFLEP
Trigger: TGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCTGTATTTCTTGCATaGAGATACGCTGTTGCCCGG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSVFLA*RYAVAR
Trigger: CCGGGCAACAGCGTATCTCCATGCAAGAAATACAGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCAAGTGCTGCATCATaGGTTGGGGCTGATAATACT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDASAAS*VGADNT
Trigger: AGTATTATCAGCCCCAACCCATGATGCAGCACTTGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACTCCTTCAGGCAGATaGAGCATGTCAGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTPSGR*SMSACS
Trigger: AGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGCCAATGTTGATGCGTaGTTCAACATCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVANVDA*FNIYSL
Trigger: CAGACTGTAGATGTTGAACCACGCATCAACATTGGC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTTGCTGGAGGTCATaGTTTTCTAGTTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLCWRS*FSSSGQ
Trigger: CTGGCCAGAACTAGAAAACCATGACCTCCAGCAAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCTCCACTCTTTGCTaGAGGTCATGGTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFSTLC*RSWFSS
Trigger: ACTAGAAAACCATGACCTCCAGCAAAGAGTGGAGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACTGAGCCACCGTCTTaGACTTCACCATCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTEPPS*TSPSSV
Trigger: TACAGAAGATGGTGAAGTCCAAGACGGTGGCTCAGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCTCACTGCAAACTATaGAATGAGGTCAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAHCKL*NEVRTE
Trigger: TTCTGTTCTGACCTCATTCCATAGTTTGCAGTGAGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACCTGTTTTCACATTTaGTCATCTCCTCACATGTCG +
Preference number: 4 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTCFHI*SSPHMS
Trigger: CGACATGTGAGGAGATGACCAAATGTGAAAACAGGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAAGCAGAGCAAAGTCATaGAGGTTGGAGAAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSRAKS*RLEKSR
Trigger: TCTAGACTTCTCCAACCTCCATGACTTTGCTCTGCT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATGTTGTCAGCAAAGTaGCCCAGCGTGATAGGCACA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIMLSAK*PSVIGT
Trigger: TGTGCCTATCACGCTGGGCCACTTTGCTGACAACAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGAATTACATCCTGATATaGAAGGCATGCAATTCATCT +
Preference number: 4 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQNYILI*KACNSS
Trigger: AGATGAATTGCATGCCTTCCATATCAGGATGTAATT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCATATTGTTGACCTaGATTCGCAGGTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAILLT*IRRFWL
Trigger: CAACCAAAACCTGCGAATTCAGGTCAACAATATGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCCTGGGCCATATTGTTaGCCTGAATTCGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIPGPYC*PEFAGF
Trigger: AAAACCTGCGAATTCAGGTCAACAATATGGCCCAGG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACCCTGAAGCAAGACTaGATCTTGATCATCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTLKQD*ILIIQE
Trigger: CTCTTGGATGATCAAGATTCAGTCTTGCTTCAGGGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRICCG*VCISCM
Trigger: CATGCAAGAAATACAGACGCAGCCGCAACAAATTCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACATCATGTTTGAGTTaGCCAGGTTTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTSCLS*PGFHVA
Trigger: AGCTACGTGGAAACCTGGCCAACTCAAACATGATGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCAATGTTGATGCGTaGTTCAACATCTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDANVDA*FNIYSL
Trigger: CAGACTGTAGATGTTGAACCACGCATCAACATTGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTATCAGGGATTTCTGCTTaGAATCTCAAGCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVSGISA*NLKPML
Trigger: CAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGA...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCACCTGGCAATGCACTaGAACAGCACAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDHLAMH*NSTNSE
Trigger: TTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGAAAAAGCTTATCACTTaGAGGGGAAACAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVKKLIT*RGNNLE
Trigger: TTCTAGGTTGTTTCCCCTCCAAGTGATAAGCTTTTT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR TCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCACTGTCTCTAAGTaGCACACAGGGCTTTATAGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFTVSK*HTGLYS
Trigger: ACTATAAAGCCCTGTGTGTCACTTAGAGACAGTGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCTGGTCGACTGCTTTaGTGTAAAATATTCCAACAC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPGRLL*CKIFQH
Trigger: GTGTTGGAATATTTTACAGCAAAGCAGTCGACCAGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIRICCG*VCISCM
Trigger: CATGCAAGAAATACAGACGCAGCCGCAACAAATTCG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGAGTTCAGGGATTTCTaGTTGGAATCTCAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDEFRDF*LESQAN
Trigger: ATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGATTCTCCACTCTTTaGTGGAGGTCATGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRFSTL*WRSWFS
Trigger: AGAAAACCATGACCTCCAGCAAAGAGTGGAGAATCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATCTCCAGGCAAAGATaGCATGCTCACTGCAAACTA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIISRQR*HAHCKL
Trigger: TAGTTTGCAGTGAGCATGGCATCTTTGCCTGGAGAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCAAAATCCCAGTGAATaGGGTTTCACAGTACTTCCA +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDQNPSE*GFTVLP
Trigger: TGGAAGTACTGTGAAACCGCATTCACTGGGATTTTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACTGATATGGAAGGCATaGAATTCATCTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVLIWKA*NSSAEN
Trigger: ATTCTCAGCAGATGAATTGCATGCCTTCCATATCAG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCAGGGATTTCTGCTTaGAATCTCAAGCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSGISA*NLKPML
Trigger: CAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCTCCACTCTTTGCTaGAGGTCATGGTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFSTLC*RSWFSS
Trigger: ACTAGAAAACCATGACCTCCAGCAAAGAGTGGAGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCACCTGGCAATGCACTaGAACAGCACAAATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIHLAMH*NSTNSE
Trigger: TTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACATAGTGCTTTAATATaGACCAAGGGACTTGCATTC +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVHSALI*TKGLAF
Trigger: GAATGCAAGTCCCTTGGTCCATATTAAAGCACTATG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAACACAACACATACATaGAGGCAGAATTATTTCAGA +
Preference number: 4 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYNTTHT*RQNYFR
Trigger: TCTGAAATAATTCTGCCTGCATGTATGTGTTGTGTT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTTCTCCACTCTTTGCTaGAGGTCATGGTTTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIFSTLC*RSWFSS
Trigger: ACTAGAAAACCATGACCTCCAGCAAAGAGTGGAGAA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCAAAGTCATGGAGGTTaGAGAAGTCTAGAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIQSHGG*RSLEVL
Trigger: AAGCACTTCTAGACTTCTCCAACCTCCATGACTTTG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTGAGTTTTCATGTGTaGATTTCGGCTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVSFHV*ISAFDL
Trigger: AAGATCAAAAGCCGAAATGCACACATGAAAACTCAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CCA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAAATTACATCCTGATATaGAAGGCATGCAATTCATCT +
Preference number: 4 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVNYILI*KACNSS
Trigger: AGATGAATTGCATGCCTTCCATATCAGGATGTAATT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR GCA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTTGTTGGCCTTCAATaGTATTTGTCTTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFVGLQ*YLSCIC
Trigger: GCAAATACAAGACAAATAGCATTGAAGGCCAACAAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS TCA 90 bp GGTGGCGGCGGAGGCGGAGGCGGAGGCGGCAGTGGTGGCTGGGGCTaGGGCGGCAGGACCTTCTCTCCTTCCTCCTGTTTGAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGGGGGGGGGSGGWG*GGRTFSPSSCLRLG
Trigger: CCCCAACCTCAAACAGGAGGAAGGAGAGAAGGTCCTGCCGCCTCAGCCCCAGCCACCACTGCCGCCTCCGCCTCCGCCTCCGCCGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AGCACCCGTGGTGTGGGCGTCAGGGGCGTCAGGGGCAGCTGCGGGTaGGCGCCAGGGCCGTGGCCGGAGATGAGGACATTGCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: STRGVGVRGVRGSCG*APGPWPEMRTLLKS
Trigger: GCTCTTCAGCAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCACCCGCAGCTGCCCCTGACGCCCCTGACGCCCACACCACGGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp CACGTTGCTGCCATCGATGCTGTTGGAGCGACACAGCAGCACCCGTaGTGTGGGCGTCAGGGGCGTCAGGGGCAGCTGCGGGTGGGCGCC +
Preference number: 5 (lower is better)
Translates to: HVAAIDAVGATQQHP*CGRQGRQGQLRVGA
Trigger: GGCGCCCACCCGCAGCTGCCCCTGACGCCCCTGACGCCCACACCACGGGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCAGCAACGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GTGAGGCTGCTGGGGCACCTGCTGGTAGCGGGAAGGGATAGCCGGTaGTGGGGGCTCCATGGGCTTCTGAGACAGCAGCTGGCGGAGAGC +
Preference number: 5 (lower is better)
Translates to: VRLLGHLLVAGRDSR*WGLHGLLRQQLAES
Trigger: GCTCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCCCGCTACCAGCAGGTGCCCCAGCAGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AGGCTGCTGGGGCACCTGCTGGTAGCGGGAAGGGATAGCCGGTGCTaGGGGCTCCATGGGCTTCTGAGACAGCAGCTGGCGGAGAGCACT +
Preference number: 5 (lower is better)
Translates to: RLLGHLLVAGRDSRC*GLHGLLRQQLAEST
Trigger: AGTGCTCTCCGCCAGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCCCGCTACCAGCAGGTGCCCCAGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTGCCTGTCGGG +
Preference number: 5 (lower is better)
Translates to: SASQRGWHLGPWSPG*CPRGCGHGHSVPVG
Trigger: CCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGCTTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTGCCTGT +
Preference number: 5 (lower is better)
Translates to: GFCFPEGMAPRALVT*LVPPWMRAWPFSAC
Trigger: ACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TGCCACCAGGCTTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCATGGCCATTCA +
Preference number: 5 (lower is better)
Translates to: CHQASASQRGWHLGP*SPGWCPRGCGHGHS
Trigger: TGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGGTCATCCTCACGAGCACAGGCATCTCGTCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GSSSRAQASRRPTSS*LACLWRRGRQRCCW
Trigger: CCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGTGAGGATGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCCGCAGATGGCTGAGTaGGGGGCCTGGTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGPQMAE*GAWFWG
Trigger: CCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GGGGGCCTGGTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAGGTGGGAAGAGGAGGCCTGGTCGAC +
Preference number: 5 (lower is better)
Translates to: GGLVLGASPAVGQSC*FHAAGQVGRGGLVD
Trigger: GTCGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS GCA 90 bp ATTGAACCCTGCCGCTGCTGCAGCTGTAGCTGCTGCGGCTGCTGCTaGTGTGGCGGCGGCTGTGGCTGTGATGGGCGAATTTGTTGCGGC +
Preference number: 5 (lower is better)
Translates to: IEPCRCCSCSCCGCC*CGGGCGCDGRICCG
Trigger: GCCGCAACAAATTCGCCCATCACAGCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GGGGGCCTGGTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAGGTGGGAAGAGGAGGCCTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GGLVLGASPAVGQSC*FHAAGQVGRGGLVL
Trigger: CAGGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TCCTGGGGATTTCGAGCACAGGCATCTCGTCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: SWGFRAQASRRPTSS*LACLWRRGRQRCCW
Trigger: CCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGAAATCCCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS GCA 90 bp GTTGGGGGCCTGGTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGACAGGTGGGAAGAGGAGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VGGLVLGASPAVGQS*CFHAAGQVGRGGLV
Trigger: GACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp CTCCGCAGATGGCTGAGTTGGGGGCCTGGTTCTGGGGGCTTCTCCTaGGGTCGGCCAATCATGCTGCTTTCATGCTGCTGGACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LRRWLSWGPGSGGFS*GRPIMLLSCCWTGG
Trigger: CCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp TGCATTGAACCCTGCCGCTGCTGCAGCTGTAGCTGCTGCGGCTGCTaGTGCTGTGGCGGCGGCTGTGGCTGTGATGGGCGAATTTGTTGC +
Preference number: 5 (lower is better)
Translates to: CIEPCRCCSCSCCGC*CCGGGCGCDGRICC
Trigger: GCAACAAATTCGCCCATCACAGCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAATGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GTGAGGAGACGTCGCTCACACCTTGACCTCCGCAGATGGCTGAGTTaGGGGCCTGGTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATG +
Preference number: 5 (lower is better)
Translates to: VRRRRSHLDLRRWLS*GPGSGGFSCGRPIM
Trigger: CATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACGTCTCCTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGTGGCTGTAGGGCTGCTGGGGCTCCTGGTAGTAGTACTGGGACATaGAGCCCAGGGGAATCAGCTGGACAGTGTGTGCCTGCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGCRAAGAPGSSTGT*SPGESAGQCVPALG
Trigger: CCCCAGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGGCTCCATGTCCCAGTACTACTACCAGGAGCCCCAGCAGCCCTACAGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGGGATTTCGAGCACAGGCATCTCGTCGTCCGACATCGAGCTGGCTaGCTTGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GDFEHRHLVVRHRAG*LVSGGGGGNGAVGE
Trigger: TTCACCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGAAATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS CCA 90 bp CATCCTCACGAGCACAGGCATCTCGTCGTCCGACATCGAGCTGGCTaGCTTGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: HPHEHRHLVVRHRAG*LVSGGGGGNGAVGE
Trigger: TTCACCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGTGAGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS TCA 90 bp GAGGTTCCGGCCGGTGCCGGAACTTTTTCTTCTCCTGCACGGTCTTaGGGGGCTCCTCGGCTTTGGGCACACTCGGCTGATGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: EVPAGAGTFSSPARS*GAPRLWAHSADASW
Trigger: CCAGGAAGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp ATCTGCATTGAACCCTGCCGCTGCTGCAGCTGTAGCTGCTGCGGCTaGTGCTGCTGTGGCGGCGGCTGTGGCTGTGATGGGCGAATTTGT +
Preference number: 5 (lower is better)
Translates to: ICIEPCRCCSCSCCG*CCCGGGCGCDGRIC
Trigger: ACAAATTCGCCCATCACAGCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAATGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACACCTGGGGAAGAAAGGGAGTGACATG +
Preference number: 5 (lower is better)
Translates to: GHLVGAPVDAGMAIQ*LSGAEHLGKKGSDM
Trigger: CATGTCACTCCCTTTCTTCCCCAGGTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS TCA 90 bp GATGGTGGTGGGGTCTGTCTCGCCGCTGGTGGTGCTGTGAGAGGGTaGGCTCTTTACCGAACAGTACCCACTCTGGGTGCCACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: DGGGVCLAAGGAVRG*ALYRTVPTLGATRL
Trigger: AAGCCTGGTGGCACCCAGAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 90 bp CAGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACCGAACAGTACCCACTCTGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: QGKMVVGSVSPLVVL*EGELFTEQYPLWVP
Trigger: TGGCACCCAGAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GGAGATTGGCGAGGCCTGAGGGGCATCCATTCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTTCAGCCCGCTGTGGACGCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GDWRGLRGIHSAPCN*IPIVVVQPAVDAKW
Trigger: CCACTTGGCGTCCACAGCGGGCTGAACCACAACTATGGGAATGCAGTTACAGGGGGCGGAATGGATGCCCCTCAGGCCTCGCCAATCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GAGCTCTTTACCGAACAGTACCCACTCTGGGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ELFTEQYPLWVPPGF*FPEGMAPRALVTWL
Trigger: CAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCACCCAGAGTGGGTACTGTTCGGTAAAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp CCTTGCAGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTGGTGGTaGTGTGAGAGGGTGAGCTCTTTACCGAACAGTACCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: PCRGRWWWGLSRRWW*CERVSSLPNSTHSG
Trigger: CCCAGAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TCTCCTTCCTCCTGTTTGAGGTTGGGGGAGGCCCTCATTCCCCCGTaGGACCGCATGTGGCCATTCAGGGCAGGCAGGTTCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: SPSSCLRLGEALIPP*DRMWPFRAGRFLNS
Trigger: GGAGTTCAAGAACCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGGGGGAATGAGGGCCTCCCCCAACCTCAAACAGGAGGAAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACTGCCATCGATGCTGTaGGAGCGACACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GEPCNTRACFAPGKLPLALPSML*ERHSST
Trigger: GGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCAG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp TCTGGGGGCTTCTCCTGCGGTCGGCCAATCATGCTGCTTTCATGCTaGTGGACAGGTGGGAAGAGGAGGCCTGGTCGACTGCTTTGCTGT +
Preference number: 5 (lower is better)
Translates to: SGGFSCGRPIMLLSC*WTGGKRRPGRLLCC
Trigger: ACAGCAAAGCAGTCGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS CCA 90 bp ATAATACAGGTGCCCTTGGGTAGGGTGCTGCCCGACCTGAAGAGCTaGTTTGGACAGCCCACCAGTGAAACCAGGGTGAGGCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: IIQVPLGRVLPDLKS*FGQPTSETRVRLLG
Trigger: CCCCAGCAGCCTCACCCTGGTTTCACTGGTGGGCTGTCCAAACCAGCTCTTCAGGTCGGGCAGCACCCTACCCAAGGGCACCTGTATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TGTTTGAGGTTGGGGGAGGCCCTCATTCCCCCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGGTTCTTGAACTCCTTCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: CLRLGEALIPPWDRM*PFRAGRFLNSFRQM
Trigger: CATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGGGGGAATGAGGGCCTCCCCCAACCTCAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp CACACTCCTTGCAGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTaGTGGTGCTGTGAGAGGGTGAGCTCTTTACCGAACAGTACCCAC +
Preference number: 5 (lower is better)
Translates to: HTPCRGRWWWGLSRR*WCCERVSSLPNSTH
Trigger: GTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTGCAAGGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp TGCTGTGGCGGCGGCTGTGGCTGTGATGGGCGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATGGAGATACGCTGTTGCCCGGCTTGC +
Preference number: 5 (lower is better)
Translates to: CCGGGCGCDGRICCG*VCISCMEIRCCPAC
Trigger: GCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATTCGCCCATCACAGCCACAGCCGCCGCCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGGGGCTTCTCCTGCGGTCGGCCAATCATGCTGCTTTCATGCTGCTaGACAGGTGGGAAGAGGAGGCCTGGTCGACTGCTTTGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: GGFSCGRPIMLLSCC*TGGKRRPGRLLCCK
Trigger: TTTACAGCAAAGCAGTCGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS CCA 90 bp ACTCCTTGCAGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGCTCTTTACCGAACAGTACCCACTCT +
Preference number: 5 (lower is better)
Translates to: TPCRGRWWWGLSRRW*CCERVSSLPNSTHS
Trigger: AGAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTGCAAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAAGGGCAGGCAGGTTCTaGAACTCCTTCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: GEPCNTRACFAPGKLPLARAGRF*NSFRQM
Trigger: CATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCCT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGATGGCACCTCGGGCCTaGGTCACCTGGTTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMMAPRA*VTWLVP
Trigger: GGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCAT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCAACTTTGCCACACTCCTaGCAGGGGAAGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GEPCNTRACFAPGKLPLATLPHS*QGKMVV
Trigger: CACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAGT...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS TCA 90 bp CAGCAGCTGGCGGAGAGCACTGTCAGGGGCTCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTGGGCCATATTGTTGACCTGAATTCG +
Preference number: 5 (lower is better)
Translates to: QQLAESTVRGSIHHC*LSVQHLGHIVDLNS
Trigger: CGAATTCAGGTCAACAATATGGCCCAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGAGCCCCTGACAGTGCTCTCCGCCAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCATGTCAGCTTGTTCTaGGCATCAAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGHVSLF*ASNCSP
Trigger: TGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGACCATCACATCACCTTaGGCCTCAAACAGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGTITSP*ASNREC
Trigger: GCACTCTCTGTTTGAGGCCAAAGGTGATGTGATGGT...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGACACGAGGGCTTGCTTaGCCCCTGGAAAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMTRGLA*PLESCP
Trigger: GGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp GTAGTACTGGGACATGGAGCCCAGGGGAATCAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTGGTGAGGGTCCCTGTGATAAGAAGG +
Preference number: 5 (lower is better)
Translates to: VVLGHGAQGNQLDSV*LLWGILVRVPVIRR
Trigger: CCTTCTTATCACAGGGACCCTCACCAGTATACCCCAGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGGCTCCATGTCCCAGTACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TTCCCCACCCTCCCTGCCTCGAGGTATCCATTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCAGACCATCCCGTGTATCTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: FPTLPASRYPFGQGF*SQQASPDHPVYLEG
Trigger: TCCCTCAAGATACACGGGATGGTCTGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGGCAGGGAGGGTGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GCTGTGATGGGCGAATTTGTTGCGGCTGCGTCTGTATTTCTTGCATaGAGATACGCTGTTGCCCGGCTTGCTGCTGTTGCTGCGGTGGGT +
Preference number: 5 (lower is better)
Translates to: AVMGEFVAAASVFLA*RYAVARLAAVAAVG
Trigger: ACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATTCGCCCATCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GGAGAGCCGTGTAACACGAGGGCTTGCTTTGCCCCTGGAAAGCTGCCCCTAGCACACATCATGTTTGAGTaGGCCAGGTTTCCACGTAGC +
Preference number: 5 (lower is better)
Translates to: GEPCNTRACFAPGKLPLAHIMFE*ARFPRS
Trigger: GCTACGTGGAAACCTGGCCAACTCAAACATGATGTG...TGCTAGGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGTTACACGGCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQALVTW*VPPWMR
Trigger: CCGCATCCACGGGGGCACCAACCAGGTGACCAAGGC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp AGATCGGTGTCCACAACTTCAGCCTCTTCCATGACACCTCCCAACTaGTGGACGACGTCGTCGTCGAGGATGTCCACATCCTTGATGGGT +
Preference number: 5 (lower is better)
Translates to: RSVSTTSASSMTPPN*WTTSSSRMSTSLMG
Trigger: ACCCATCAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCATGGAAGAGGCTGAAGTTGTGGACACCGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AATGTTGATGCGTGGTTCAACATCTACAGTCTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCTGCCATCGATGCTGTTGGAGCGACA +
Preference number: 5 (lower is better)
Translates to: NVDAWFNIYSLLSRP*GDRHVAAIDAVGAT
Trigger: TGTCGCTCCAACAGCATCGATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGAACCACGCATCAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AGTTCTGGCCAGGGCTTCCATACCAGTGTGGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCTTGGAGTTCAGGGATTTCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSGQGFHTSVALCVS*ARAEISWSSGISAW
Trigger: CCAAGCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTGGCCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GTGGTGGCTCCGGGGACTTCGGCACCTCACTCTCTTCTTCTTTTGTaGATTTCCTATCTTCTTCCGGGTCCTCCTCCTCCTCCTCCTCTA +
Preference number: 5 (lower is better)
Translates to: VVAPGTSAPHSLLLL*ISYLLPGPPPPPPL
Trigger: TAGAGGAGGAGGAGGAGGAGGACCCGGAAGAAGATAGGAAATCCACAAAAGAAGAAGAGAGTGAGGTGCCGAAGTCCCCGGAGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp TCGGTGTCCACAACTTCAGCCTCTTCCATGACACCTCCCAACTGCTaGACGACGTCGTCGTCGAGGATGTCCACATCCTTGATGGGTTTG +
Preference number: 5 (lower is better)
Translates to: SVSTTSASSMTPPNC*TTSSSRMSTSLMGL
Trigger: CAAACCCATCAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCATGGAAGAGGCTGAAGTTGTGGACACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCCGCAGATGGCTGAGTaGGGGGCCTGGTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHPQMAE*GAWFWG
Trigger: CCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGCCCATGCTGTCTGCCTaGGTTGTGAACGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMPMLSA*VVNVQP
Trigger: TGGCTGGACGTTCACAACCAAGGCAGACAGCATGGG...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLALVTW*VPPWMR
Trigger: CCGCATCCACGGGGGCACCAACCAGGTGACCAAGGC...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp TCCTTCAGGCAGATGGAGCATGTCAGCTTGTTCTTGGCATCAAACTaGTCCCCAAACGCTCCTTTGGGTTGGCCACTTGACTCAGGGGAC +
Preference number: 5 (lower is better)
Translates to: SFRQMEHVSLFLASN*SPNAPLGWPLDSGD
Trigger: GTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATGCTCCATCTGCCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GGAGGTCATGGTTTTCTAGTTCTGGCCAGGGCTTCCATACCAGTGTaGCCTTGTGTGTGTCCTGGGCCAGGGCAGAGATATCTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: GGHGFLVLARASIPV*PCVCPGPGQRYLGV
Trigger: AACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTGGCCAGAACTAGAAAACCATGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGGCCACATGGTTGGTCTaGTACAGTTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMATWLV*YSCWSP
Trigger: GGGTGACCAGCAACTGTACAAGACCAACCATGTGGC...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGTCCCCAAACGCTCCTTaGGGTTGGCCACTTGACTCA +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMSPNAP*GWPLDS
Trigger: TGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGGA...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCCGGAGATGAGGACATaGCTGAAGAGCCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQPEMRT*LKSPEP
Trigger: GGGCTCGGGGCTCTTCAGCAATGTCCTCATCTCCGG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGACACGAGGGCTTGCTTaGCCCCTGGAAAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQTRGLA*PLESCP
Trigger: GGGGCAGCTTTCCAGGGGCAAAGCAAGCCCTCGTGT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AGGTTCTCACTACCATGGGCCACATGGTTGGTCTTGTACAGTTGCTaGTCACCCATGCTGTCTGCCTTGGTTGTGAACGTCCAGCCACAA +
Preference number: 5 (lower is better)
Translates to: RFSLPWATWLVLYSC*SPMLSALVVNVQPQ
Trigger: TTGTGGCTGGACGTTCACAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AACTGCATTCCCATAGTTGTGGTTCAGCCCGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAGGTTCTCACTACCATGGGCCACATG +
Preference number: 5 (lower is better)
Translates to: NCIPIVVVQPAVDAK*WLLVEKVLTTMGHM
Trigger: CATGTGGCCCATGGTAGTGAGAACCTTTTCTACCAACAGCCACCACTTGGCGTCCACAGCGGGCTGAACCACAACTATGGGAATGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTGGGAGTAGGTGTATaGGTAGCCATCAGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLGVGV*VAISGL
Trigger: GAGCCCACTGATGGCTACCAATACACCTACTCCCAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCCGGAGATGAGGACATaGCTGAAGAGCCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHPEMRT*LKSPEP
Trigger: GGGCTCGGGGCTCTTCAGCAATGTCCTCATCTCCGG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGGCGAGCAGAGCTTaGCATTGCTCCCCATCCTCG +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGASRA*HCSPSS
Trigger: CGAGGATGGGGAGCAATGCAAAGCTCTGCTCGCCCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGTCTCCTTCCTCCTGTTaGAGGTTGGGGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSPSSC*RLGEAL
Trigger: GAGGGCCTCCCCCAACCTCAAACAGGAGGAAGGAGA...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGAGCAGAGCTTTGCATaGCTCCCCATCCTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLEQSFA*LPILAP
Trigger: GGGGGCGAGGATGGGGAGCAATGCAAAGCTCTGCTC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS GCA 90 bp AAAAGGTTCTCACTACCATGGGCCACATGGTTGGTCTTGTACAGTTaGTGGTCACCCATGCTGTCTGCCTTGGTTGTGAACGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: KRFSLPWATWLVLYS*WSPMLSALVVNVQP
Trigger: TGGCTGGACGTTCACAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp GTGGCTGTTGGTAGAAAAGGTTCTCACTACCATGGGCCACATGGTTaGTCTTGTACAGTTGCTGGTCACCCATGCTGTCTGCCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: VAVGRKGSHYHGPHG*SCTVAGHPCCLPWL
Trigger: CAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTTCTACCAACAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACTTTGGGTTGGCCACTaGACTCAGGGGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLLWVGH*TQGTLA
Trigger: AGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGGGGTGACCGTCACGTaGCTGCCATCGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLGVTVT*LPSMLL
Trigger: CAACAGCATCGATGGCAGCAACGTGACGGTCACCCC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGGGGTGACCGTCACGTaGCTGCCATCGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHGVTVT*LPSMLL
Trigger: CAACAGCATCGATGGCAGCAACGTGACGGTCACCCC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGCCCAGCGTGATAGGCACACCTACGTGGAGCTGGGAACCAGCATACCTGGGGCGGCATAGTGGTAATTaGCTAAAGGATGACATTTTA +
Preference number: 5 (lower is better)
Translates to: WPSVIGTPTWSWEPAYLGRHSGN*LKDDIL
Trigger: TAAAATGTCATCCTTTAGCAAATTACCACTATGCCG...CCCCAGGTATGCTGGTTCCCAGCTCCACGTAGGTGTGCCTATCACGCTGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGALVTW*VPPWMR
Trigger: CCGCATCCACGGGGGCACCAACCAGGTGACCAAGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGATCTTGAAGAAGACTTaGCCACACTCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMILKKT*PHSLQG
Trigger: CCCCTGCAAGGAGTGTGGCAAAGTCTTCTTCAAGAT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp CTTTGCCCCTGGAAAGCTGCCCCTAGCATAGTATCTCCAGGCAAAGATGCCATGACATCCTTGATGGGTTaGATCAGACTCAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LCPWKAAPSIVSPGKDAMTSLMG*IRLSWS
Trigger: GGACCAGCTGAGTCTGATCAAACCCATCAAGGATGT...CATGGCATCTTTGCCTGGAGATACTATGCTAGGGGCAGCTTTCCAGGGGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp ACCAGTGTGGCCTTGTGTGTGTCCTGGGCCAGGGCAGAGATATCTTaGAGTTCAGGGATTTCTGCTTGGAATCTCAAGCCAATGTTGATG +
Preference number: 5 (lower is better)
Translates to: TSVALCVSWARAEIS*SSGISAWNLKPMLM
Trigger: CATCAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAGCCAGGTGTTCCTGTaGGCCTGTACCACTCATGTG +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQSQVFL*ACTTHV
Trigger: CACATGAGTGGTACAGGCCAACAGGAACACCTGGCT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTGAATTCGCAGGTTTaGGTTGGCAAACACCTGGGT +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLNSQV*VGKHLG
Trigger: ACCCAGGTGTTTGCCAACCAAAACCTGCGAATTCAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACGCTGTTGCCCGGCTaGCTGCTGTTGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTLLPG*LLLLRW
Trigger: CCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACCATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHHGDTL*PGLLLL
Trigger: CAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATG...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGTTGCTGCTGCTGCTCTaGCAAGTGCTGCATCATGGG +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQLLLLL*QVLHHG
Trigger: CCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCAA...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGCTGCAGGTGCATCTGTaGCTGCTGCTGCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQLQVHL*LLLLLQ
Trigger: TTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCAG...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGGCACCTCGGGCCTaGGTCACCTGGTTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMAPRA*VTWLVP
Trigger: GGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACATCCTTGATGGGTTaGATCAGACTCAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTSLMG*IRLSWS
Trigger: GGACCAGCTGAGTCTGATCAAACCCATCAAGGATGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAAACACAGCCCCACAGTaGGGCATTTCACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKNTAPQ*GISQMK
Trigger: CTTCATCTGTGAAATGCCCAACTGTGGGGCTGTGTT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAAACTCCAAAAGGGGAGTaGCATGAAGCAGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKTPKGE*HEAGSS
Trigger: AGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGT...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCGCAGATGGCTGAGTaGGGGGCCTGGTTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPQMAE*GAWFWG
Trigger: CCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCCACATGGTTGGTCTaGTACAGTTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHATWLV*YSCWSP
Trigger: GGGTGACCAGCAACTGTACAAGACCAACCATGTGGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCCATGGGCCACATGGTaGGTCTTGTACAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQPWATW*VLYSCW
Trigger: CCAGCAACTGTACAAGACCAACCATGTGGCCCATGG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACCATGGGCCACATGGTaGGTCTTGTACAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLPWATW*VLYSCW
Trigger: CCAGCAACTGTACAAGACCAACCATGTGGCCCATGG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAACTGCGTCTGTATTTCTaGCATGGAGATACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKLRLYF*HGDTLL
Trigger: CAACAGCGTATCTCCATGCAAGAAATACAGACGCAG...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACACTGAGGTATCTGCATaGAACCCTGCCGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHTEVSA*NPAAAA
Trigger: TGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAGT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGGTGCTGCATCATGGGTaGGGGCTGATAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQVLHHG*GLIILR
Trigger: CCTCAGTATTATCAGCCCCAACCCATGATGCAGCAC...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATTGCTGCTGCTGCTCTaGCAAGTGCTGCATCATGGG +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLLLLLL*QVLHHG
Trigger: CCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCAA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTCCCCAAACGCTCCTTaGGGTTGGCCACTTGACTCA +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHSPNAP*GWPLDS
Trigger: TGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGGA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGTTCTCCTGCACGGTCTaGAGGGGCTCCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVFSCTV*RGSSAL
Trigger: CAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAA...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCGGAGATGAGGACATaGCTGAAGAGCCCCGAGCCC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPEMRT*LKSPEP
Trigger: GGGCTCGGGGCTCTTCAGCAATGTCCTCATCTCCGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDALVTW*VPPWMR
Trigger: CCGCATCCACGGGGGCACCAACCAGGTGACCAAGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGACTTTGCCACACTCCTaGCAGGGGAAGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLTLPHS*QGKMVV
Trigger: CACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAGT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGAGCCTTTTGCCTCTGTaGTTCCTCCTGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLSLLPL*FLLLPV
Trigger: CACAGGCAGCAGGAGGAACAACAGAGGCAAAAGGCT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACAGCCTTTTGCCTCTGTaGTTCCTCCTGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHSLLPL*FLLLPV
Trigger: CACAGGCAGCAGGAGGAACAACAGAGGCAAAAGGCT...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCGCCTTCTGAGCCTTTaGCCTCTGTTGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRLLSL*PLLFLL
Trigger: CAGGAGGAACAACAGAGGCAAAAGGCTCAGAAGGCG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGCGCCTTCTGAGCCTTTaGCCTCTGTTGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQRLLSL*PLLFLL
Trigger: CAGGAGGAACAACAGAGGCAAAAGGCTCAGAAGGCG...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGGCGAGCAGAGCTTaGCATTGCTCCCCATCCTCG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGASRA*HCSPSS
Trigger: CGAGGATGGGGAGCAATGCAAAGCTCTGCTCGCCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTTGGGCGGGAGAAGCTaGACAGGGACAGACACGGGC +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLGGRS*TGTDTG
Trigger: GCCCGTGTCTGTCCCTGTCAAGCTTCTCCCGCCCAA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTCTGCCACCCACAACTaGGAGCTGACCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYSATHN*ELTSPQ
Trigger: CTGGGGGCTGGTCAGCTCCAAGTTGTGGGTGGCAGA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAGAGGGTCGCCTGCGTCTCACACACACACACTCACAGCAAGCTTTGGGATAAATATGGACCAAGGGACTaGCATTCCGGGAAAATACAG +
Preference number: 5 (lower is better)
Translates to: KRVACVSHTHTHSKLWDKYGPRD*HSGKIQ
Trigger: CTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCATA...TTTATCCCAAAGCTTGCTGTGAGTGTGTGTGTGTGAGACGCAGGCGACCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp TGTGTCCTGGGCCAGGGCAGAGATATCTTGGAGTTCAGGGATTTCTaGTTGGAATCTCAAGCCAATGTTGATGCGTGGTTCAACATCTAC +
Preference number: 5 (lower is better)
Translates to: CVLGQGRDILEFRDF*LESQANVDAWFNIY
Trigger: GTAGATGTTGAACCACGCATCAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAGTTGGTCTTGTACAGTaGCTGGTCACCCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLVGLVQ*LVTHAV
Trigger: GACAGCATGGGTGACCAGCAACTGTACAAGACCAAC...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACCTCGAGGTATCCATTaGGCCAAGGTTTTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLPRGIH*AKVFGA
Trigger: GGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGG...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACGCTGTTGCCCGGCTaGCTGCTGTTGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTLLPG*LLLLRW
Trigger: CCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVHGDTL*PGLLLL
Trigger: CAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTTTGGGTTGGCCACTaGACTCAGGGGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLWVGH*TQGTLA
Trigger: AGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCTTTGGGTTGGCCACTaGACTCAGGGGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYLWVGH*TQGTLA
Trigger: AGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGGGGATTTCCTGTTaGAGGTTGGGGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLGISC*RLGEAL
Trigger: GAGGGCCTCCCCCAACCTCAAACAGGAAATCCCCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCTCCTGCACGGTCTaGAGGGGCTCCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFSCTV*RGSSAL
Trigger: CAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGCCATCGATGCTGTaGGAGCGACACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLPSML*ERHSST
Trigger: GGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGGGGTGACCGTCACGTaGCTGCCATCGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGGVTVT*LPSMLL
Trigger: CAACAGCATCGATGGCAGCAACGTGACGGTCACCCC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACATACCAGTGTGGCCTaGTGTGTGTCCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHTSVA*CVSWAR
Trigger: CCTGGCCCAGGACACACACAAGGCCACACTGGTATG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGGCACCTCGGGCCTaGGTCACCTGGTTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMAPRA*VTWLVP
Trigger: GGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGAGCCAGGTGTTCCTGTaGGCCTGTACCACTCATGTG +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVSQVFL*ACTTHV
Trigger: CACATGAGTGGTACAGGCCAACAGGAACACCTGGCT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCCATGCTGTCTGCCTaGGTTGTGAACGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPMLSA*VVNVQP
Trigger: TGGCTGGACGTTCACAACCAAGGCAGACAGCATGGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIIQVP*GRVLPD
Trigger: GTCGGGCAGCACCCTACCCAAGGGCACCTGTATTAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTACGCTGTTGCCCGGCTaGCTGCTGTTGCTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYITLLPG*LLLLRW
Trigger: CCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHGDTL*PGLLLL
Trigger: CAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGAGGGCAGGCAGGTTCTaGAACTCCTTCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVRAGRF*NSFRQM
Trigger: CATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCCT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACATACCAGTGTGGCCTaGTGTGTGTCCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVHTSVA*CVSWAR
Trigger: CCTGGCCCAGGACACACACAAGGCCACACTGGTATG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGAGGCAACCGGGATGGTaGACATCTGAATGCAATGGA +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLRQPGW*TSECNG
Trigger: TCCATTGCATTCAGATGTCAACCATCCCGGTTGCCT...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATGGTTCGGCCACAAAGTaGATGCACACTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYGSATK*MHTAQA
Trigger: TGCCTGGGCAGTGTGCATCAACTTTGTGGCCGAACC...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS TCA 90 bp CCGAACCGGCATAGTGGTAATTTGCTAAAGGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCAGCATTTCCAGAGCAACCATCACAT +
Preference number: 5 (lower is better)
Translates to: PNRHSGNLLKDDILT*QASAVAAFPEQPSH
Trigger: ATGTGATGGTTGCTCTGGAAATGCTGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATCCTTTAGCAAATTACCACTATGCCGGTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 90 bp CAGAGAGTGCAAAGCAAATTCAGAATTGGTCCCTCCACCTGGCAATaGACTGGAACAGCACAAATTCAGAAGATTCTCCACTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QRVQSKFRIGPSTWQ*TGTAQIQKILHSLL
Trigger: CAGCAAAGAGTGGAGAATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp AGTGCAAAGCAAATTCAGAATTGGTCCCTCCACCTGGCAATGCACTaGAACAGCACAAATTCAGAAGATTCTCCACTCTTTGCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SAKQIQNWSLHLAMH*NSTNSEDSPLFAGG
Trigger: ACCTCCAGCAAAGAGTGGAGAATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp CATCACCTTTGGCCTCAAACAGAGAGTGCAAAGCAAATTCAGAATTaGTCCCTCCACCTGGCAATGCACTGGAACAGCACAAATTCAGAA +
Preference number: 5 (lower is better)
Translates to: HHLWPQTESAKQIQN*SLHLAMHWNSTNSE
Trigger: TTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACTCTCTGTTTGAGGCCAAAGGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGCCAGGTGTTCCTGTaGGCCTGTACCACTCATGTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGSQVFL*ACTTHV
Trigger: CACATGAGTGGTACAGGCCAACAGGAACACCTGGCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACCCATGCTGTCTGCCTaGGTTGTGAACGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVPMLSA*VVNVQP
Trigger: TGGCTGGACGTTCACAACCAAGGCAGACAGCATGGG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCACATGGTTGGTCTaGTACAGTTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGATWLV*YSCWSP
Trigger: GGGTGACCAGCAACTGTACAAGACCAACCATGTGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACCATGGGCCACATGGTaGGTCTTGTACAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGPWATW*VLYSCW
Trigger: CCAGCAACTGTACAAGACCAACCATGTGGCCCATGG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGGGAGTAGGTGTATaGGTAGCCATCAGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLGVGV*VAISGL
Trigger: GAGCCCACTGATGGCTACCAATACACCTACTCCCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVIIQVP*GRVLPD
Trigger: GTCGGGCAGCACCCTACCCAAGGGCACCTGTATTAT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACTGAGGTATCTGCATaGAACCCTGCCGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTEVSA*NPAAAA
Trigger: TGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTGCTGCTGCTGCTCTaGCAAGTGCTGCATCATGGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLLLLL*QVLHHG
Trigger: CCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGCAGGTGCATCTGTaGCTGCTGCTGCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLQVHL*LLLLLQ
Trigger: TTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTTTGGGTTGGCCACTaGACTCAGGGGACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLWVGH*TQGTLA
Trigger: AGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGATGGAGCATGTCAGCTaGTTCTTGGCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQMEHVS*FLASNC
Trigger: GCAGTTTGATGCCAAGAACAAGCTGACATGCTCCAT...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAGGGCAGGCAGGTTCTaGAACTCCTTCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRAGRF*NSFRQM
Trigger: CATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCCT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATTTCCTGTTTGAGGTaGGGGGAGGCCCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGISCLR*GEALIP
Trigger: GGGAATGAGGGCCTCCCCCAACCTCAAACAGGAAAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGGGGATTTCCTGTTaGAGGTTGGGGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLGISC*RLGEAL
Trigger: GAGGGCCTCCCCCAACCTCAAACAGGAAATCCCCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCTCCTGCACGGTCTaGAGGGGCTCCTCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFSCTV*RGSSAL
Trigger: CAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCCATCGATGCTGTaGGAGCGACACAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLPSML*ERHSST
Trigger: GGTGCTGCTGTGTCGCTCCAACAGCATCGATGGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGGGTGACCGTCACGTaGCTGCCATCGATGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGVTVT*LPSMLL
Trigger: CAACAGCATCGATGGCAGCAACGTGACGGTCACCCC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCATACCAGTGTGGCCTaGTGTGTGTCCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDHTSVA*CVSWAR
Trigger: CCTGGCCCAGGACACACACAAGGCCACACTGGTATG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACTTTGCCACACTCCTaGCAGGGGAAGATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTLPHS*QGKMVV
Trigger: CACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGCCTTCTGAGCCTTTaGCCTCTGTTGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRLLSL*PLLFLL
Trigger: CAGGAGGAACAACAGAGGCAAAAGGCTCAGAAGGCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTTGGGCGGGAGAAGCTaGACAGGGACAGACACGGGC +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILGGRS*TGTDTG
Trigger: GCCCGTGTCTGTCCCTGTCAAGCTTCTCCCGCCCAA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTCTGCCACCCACAACTaGGAGCTGACCAGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYISATHN*ELTSPQ
Trigger: CTGGGGGCTGGTCAGCTCCAAGTTGTGGGTGGCAGA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACGCAAAGTCATGGAGGTaGGAGAAGTCTAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHAKSWR*EKSRSA
Trigger: AGCACTTCTAGACTTCTCCAACCTCCATGACTTTGC...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 90 bp CTCAAACAGAGAGTGCAAAGCAAATTCAGAATTGGTCCCTCCACCTaGCAATGCACTGGAACAGCACAAATTCAGAAGATTCTCCACTCT +
Preference number: 5 (lower is better)
Translates to: LKQRVQSKFRIGPST*QCTGTAQIQKILHS
Trigger: AGAGTGGAGAATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACTCTCTGTTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCCATGCTGTCTGCCTaGGTTGTGAACGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPMLSA*VVNVQP
Trigger: TGGCTGGACGTTCACAACCAAGGCAGACAGCATGGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTTGGTCTTGTACAGTaGCTGGTCACCCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVGLVQ*LVTHAV
Trigger: GACAGCATGGGTGACCAGCAACTGTACAAGACCAAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVAKWWL*VEKVLT
Trigger: AGTGAGAACCTTTTCTACCAACAGCCACCACTTGGC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIIQVP*GRVLPD
Trigger: GTCGGGCAGCACCCTACCCAAGGGCACCTGTATTAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDHGDTL*PGLLLL
Trigger: CAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTGCTGCATCATGGGTaGGGGCTGATAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVLHHG*GLIILR
Trigger: CCTCAGTATTATCAGCCCCAACCCATGATGCAGCAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTATTACCTTCAAGTACAAACAGCAACCCTGCTGACAGGGACAGGAGGAAGCAGAATCTCAAGCCAATGTaGATGCGTGGTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: LLPSSTNSNPADRDRRKQNLKPM*MRGSTS
Trigger: AGATGTTGAACCACGCATCAACATTGGCTTGAGATT...CTGCTTCCTCCTGTCCCTGTCAGCAGGGTTGCTGTTTGTACTTGAAGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGCAGGGCAGAGATATCTaGGAGTTCAGGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVQGRDI*EFRDFC
Trigger: GCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTG...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTAAAGATTCTCCACTCTTaGCTGGAGGTCATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLKILHS*LEVMVF
Trigger: GAAAACCATGACCTCCAGCAAAGAGTGGAGAATCTT...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGATCTTGAAGAAGACTTaGCCACACTCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVILKKT*PHSLQG
Trigger: CCCCTGCAAGGAGTGTGGCAAAGTCTTCTTCAAGAT...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTCTCCTTCCTCCTGTTaGAGGTTGGGGGAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYISPSSC*RLGEAL
Trigger: GAGGGCCTCCCCCAACCTCAAACAGGAGGAAGGAGA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGTTCGGCCACAAAGTaGATGCACACTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDGSATK*MHTAQA
Trigger: TGCCTGGGCAGTGTGCATCAACTTTGTGGCCGAACC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGAGAAGCGACCTGTTaGAGGATGAAGAGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGREATC*RMKRLN
Trigger: ATTCAGCCTCTTCATCCTCAAACAGGTCGCTTCTCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGCCAGGTGTTCCTGTaGGCCTGTACCACTCATGTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSQVFL*ACTTHV
Trigger: CACATGAGTGGTACAGGCCAACAGGAACACCTGGCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCACATGGTTGGTCTaGTACAGTTGCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDATWLV*YSCWSP
Trigger: GGGTGACCAGCAACTGTACAAGACCAACCATGTGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCATGGGCCACATGGTaGGTCTTGTACAGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPWATW*VLYSCW
Trigger: CCAGCAACTGTACAAGACCAACCATGTGGCCCATGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAKWWL*VEKVLT
Trigger: AGTGAGAACCTTTTCTACCAACAGCCACCACTTGGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACACATCATGTTTGAGTaGGCCAGGTTTCCACGTAGC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGHIMFE*ARFPRS
Trigger: GCTACGTGGAAACCTGGCCAACTCAAACATGATGTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATCACATCATGTTTGAGTaGGCCAGGTTTCCACGTAGC +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYHIMFE*ARFPRS
Trigger: GCTACGTGGAAACCTGGCCAACTCAAACATGATGTG...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGGGAGTAGGTGTATaGGTAGCCATCAGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLGVGV*VAISGL
Trigger: GAGCCCACTGATGGCTACCAATACACCTACTCCCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGTGAAAGAGTCCAGCTaGTGTAAGACACCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGVKESS*CKTPLV
Trigger: TACCAGCGGTGTCTTACACAAGCTGGACTCTTTCAC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGAATTCGCAGGTTTaGGTTGGCAAACACCTGGGT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLNSQV*VGKHLG
Trigger: ACCCAGGTGTTTGCCAACCAAAACCTGCGAATTCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGAC +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIIIQVP*GRVLPD
Trigger: GTCGGGCAGCACCCTACCCAAGGGCACCTGTATTAT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATACTGAGGTATCTGCATaGAACCCTGCCGCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDTEVSA*NPAAAA
Trigger: TGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAGT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGTGCTGCATCATGGGTaGGGGCTGATAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVVLHHG*GLIILR
Trigger: CCTCAGTATTATCAGCCCCAACCCATGATGCAGCAC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTGCTGCTGCTGCTCTaGCAAGTGCTGCATCATGGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLLLLL*QVLHHG
Trigger: CCCATGATGCAGCACTTGCAAGAGCAGCAGCAGCAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCAGGTGCATCTGTaGCTGCTGCTGCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLQVHL*LLLLLQ
Trigger: TTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTCCCCAAACGCTCCTTaGGGTTGGCCACTTGACTCA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSPNAP*GWPLDS
Trigger: TGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGGA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGGGCAGGCAGGTTCTaGAACTCCTTCAGGCAGATG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRAGRF*NSFRQM
Trigger: CATCTGCCTGAAGGAGTTCAAGAACCTGCCTGCCCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTTCCTGTTTGAGGTaGGGGGAGGCCCTCATTCCC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDISCLR*GEALIP
Trigger: GGGAATGAGGGCCTCCCCCAACCTCAAACAGGAAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp AAAATTATACAGTACTCCATTCCTGTGAACGGGCCAAAGGATGACGGGCAACACTTCAGGGATTTCTGCTaGGAATCTCAAGCCAATGTT +
Preference number: 5 (lower is better)
Translates to: KIIQYSIPVNGPKDDGQHFRDFC*ESQANV
Trigger: AACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAA...GTGTTGCCCGTCATCCTTTGGCCCGTTCACAGGAATGGAGTACTGTATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACAGGGCAGAGATATCTaGGAGTTCAGGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGQGRDI*EFRDFC
Trigger: GCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACCATCACATCACCTTaGGCCTCAAACAGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTITSP*ASNREC
Trigger: GCACTCTCTGTTTGAGGCCAAAGGTGATGTGATGGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATACCATCACATCACCTTaGGCCTCAAACAGAGAGTGC +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYTITSP*ASNREC
Trigger: GCACTCTCTGTTTGAGGCCAAAGGTGATGTGATGGT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATCTTGAAGAAGACTTaGCCACACTCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGILKKT*PHSLQG
Trigger: CCCCTGCAAGGAGTGTGGCAAAGTCTTCTTCAAGAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGTTTCGGCTTTTGATCTaGAAGAAGACTTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQFRLLI*KKTLPH
Trigger: GTGTGGCAAAGTCTTCTTCAAGATCAAAAGCCGAAA...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGTTTCGGCTTTTGATCTaGAAGAAGACTTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLFRLLI*KKTLPH
Trigger: GTGTGGCAAAGTCTTCTTCAAGATCAAAAGCCGAAA...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAGCCTTTTGCCTCTGTaGTTCCTCCTGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDSLLPL*FLLLPV
Trigger: CACAGGCAGCAGGAGGAACAACAGAGGCAAAAGGCT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGCCTTCTGAGCCTTTaGCCTCTGTTGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRLLSL*PLLFLL
Trigger: CAGGAGGAACAACAGAGGCAAAAGGCTCAGAAGGCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAACATCCTTGATGGGTTaGATCAGACTCAGCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGTSLMG*IRLSWS
Trigger: GGACCAGCTGAGTCTGATCAAACCCATCAAGGATGT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAACACAGCCCCACAGTaGGGCATTTCACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGNTAPQ*GISQMK
Trigger: CTTCATCTGTGAAATGCCCAACTGTGGGGCTGTGTT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTTGGTCTTGTACAGTaGCTGGTCACCCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVGLVQ*LVTHAV
Trigger: GACAGCATGGGTGACCAGCAACTGTACAAGACCAAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVAKWWL*VEKVLT
Trigger: AGTGAGAACCTTTTCTACCAACAGCCACCACTTGGC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCCTCGAGGTATCCATTaGGCCAAGGTTTTTGGAGCC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDPRGIH*AKVFGA
Trigger: GGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTGGGAGTAGGTGTATaGGTAGCCATCAGTGGGCTC +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILGVGV*VAISGL
Trigger: GAGCCCACTGATGGCTACCAATACACCTACTCCCAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATTCGCAGGTTTTGGTaGGCAAACACCTGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGIRRFW*ANTWVK
Trigger: TTTCACCCAGGTGTTTGCCAACCAAAACCTGCGAAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGCGTCTGTATTTCTaGCATGGAGATACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLRLYF*HGDTLL
Trigger: CAACAGCGTATCTCCATGCAAGAAATACAGACGCAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTGCTGCATCATGGGTaGGGGCTGATAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVLHHG*GLIILR
Trigger: CCTCAGTATTATCAGCCCCAACCCATGATGCAGCAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCTGCAGGTGCATCTGTaGCTGCTGCTGCTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYILQVHL*LLLLLQ
Trigger: TTGCAAGAGCAGCAGCAGCAACAGATGCACCTGCAG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAATGGAGCATGTCAGCTaGTTCTTGGCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGMEHVS*FLASNC
Trigger: GCAGTTTGATGCCAAGAACAAGCTGACATGCTCCAT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTACAGGGCAGAGATATCTaGGAGTTCAGGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVQGRDI*EFRDFC
Trigger: GCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTG...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCAGTCAGCCCCACAGTaGGGCATTTCACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDQSAPQ*GISQMK
Trigger: CTTCATCTGTGAAATGCCCAACTGTGGGGCTGACTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS-3UTR CAA 90 bp GTCAGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTATGTGCATTTCGGCTTTaGATCTTGAAGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: VSLTQLRSLGLNGIFEGLCAFRL*ILKKTL
Trigger: CAAAGTCTTCTTCAAGATCAAAAGCCGAAATGCACA...TAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAGCAAAGTCATGGAGGTaGGAGAAGTCTAGAAGTGCT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGAKSWR*EKSRSA
Trigger: AGCACTTCTAGACTTCTCCAACCTCCATGACTTTGC...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAACTCCAAAAGGGGAGTaGCATGAAGCAGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVTPKGE*HEAGSS
Trigger: AGAGGATCCTGCTTCATGCAACTCCCCTTTTGGAGT...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCCTGGCAACTTAATATTTGCCTCCAGATGGGTCTCTAGTCAGTTCATGCTGCTGTGCATTCTATTTTaGCCATGGCAACTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: SPGNLIFASRWVSSQFMLLCILF*PWQLSL
Trigger: TAAACTCAGTTGCCATGGCAAAAATAGAATGCACAG...CAGCATGAACTGACTAGAGACCCATCTGGAGGCAAATATTAAGTTGCCAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGAGAAGCGACCTGTTaGAGGATGAAGAGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDREATC*RMKRLN
Trigger: ATTCAGCCTCTTCATCCTCAAACAGGTCGCTTCTCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDAKWWL*VEKVLT
Trigger: AGTGAGAACCTTTTCTACCAACAGCCACCACTTGGC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGTGAAAGAGTCCAGCTaGTGTAAGACACCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDVKESS*CKTPLV
Trigger: TACCAGCGGTGTCTTACACAAGCTGGACTCTTTCAC...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGAATTCGCAGGTTTaGGTTGGCAAACACCTGGGT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLNSQV*VGKHLG
Trigger: ACCCAGGTGTTTGCCAACCAAAACCTGCGAATTCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCATGTCAGCTTGTTCTaGGCATCAAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDHVSLF*ASNCSP
Trigger: TGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCAGGGCAGAGATATCTaGGAGTTCAGGGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDQGRDI*EFRDFC
Trigger: GCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAAGATTCTCCACTCTTaGCTGGAGGTCATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGKILHS*LEVMVF
Trigger: GAAAACCATGACCTCCAGCAAAGAGTGGAGAATCTT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATAAGATTCTCCACTCTTaGCTGGAGGTCATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYKILHS*LEVMVF
Trigger: GAAAACCATGACCTCCAGCAAAGAGTGGAGAATCTT...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATCTTGAAGAAGACTTaGCCACACTCCTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDILKKT*PHSLQG
Trigger: CCCCTGCAAGGAGTGTGGCAAAGTCTTCTTCAAGAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAACACAGCCCCACAGTaGGGCATTTCACAGATGAAG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDNTAPQ*GISQMK
Trigger: CTTCATCTGTGAAATGCCCAACTGTGGGGCTGTGTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AGTCTGACTCAGCTCAGAAGCCTGGGGCTAAATGGCATTTTTGAAGGATTACAGGCAGCTGATGCAATATaGAATCAGGTTTTCACAAAT +
Preference number: 5 (lower is better)
Translates to: SLTQLRSLGLNGIFEGLQAADAI*NQVFTN
Trigger: ATTTGTGAAAACCTGATTCAATATTGCATCAGCTGC...CTGTAATCCTTCAAAAATGCCATTTAGCCCCAGGCTTCTGAGCTGAGTCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATTCGCAGGTTTTGGTaGGCAAACACCTGGGTGAAA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDIRRFW*ANTWVK
Trigger: TTTCACCCAGGTGTTTGCCAACCAAAACCTGCGAAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCTGCGTCTGTATTTCTaGCATGGAGATACGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDLRLYF*HGDTLL
Trigger: CAACAGCGTATCTCCATGCAAGAAATACAGACGCAG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTCATGTCAGCTTGTTCTaGGCATCAAACTGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIHVSLF*ASNCSP
Trigger: TGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATG...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATATGGAGCATGTCAGCTaGTTCTTGGCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDMEHVS*FLASNC
Trigger: GCAGTTTGATGCCAAGAACAAGCTGACATGCTCCAT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAATCTCAAGCCAATGTaGATGCGTGGTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGNLKPM*MRGSTS
Trigger: AGATGTTGAACCACGCATCAACATTGGCTTGAGATT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTCAGGGATTTCTGCTaGGAATCTCAAGCCAATGTT +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFRDFC*ESQANV
Trigger: AACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATTTCGGCTTTTGATCTaGAAGAAGACTTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGFRLLI*KKTLPH
Trigger: GTGTGGCAAAGTCTTCTTCAAGATCAAAAGCCGAAA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTAGGCAACCGGGATGGTaGACATCTGAATGCAATGGA +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIRQPGW*TSECNG
Trigger: TCCATTGCATTCAGATGTCAACCATCCCGGTTGCCT...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGAAACCTGTTTTCACATTaGGTCATCTCCTCACATGTC +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGNLFSH*VISSHV
Trigger: GACATGTGAGGAGATGACCAAATGTGAAAACAGGTT...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GATGTGAATTACAGCAAAATCCCAGTGAATGCGGTTTCACAGTACTTCCAAGTGGGCCTTCAATGCTATTaGTCTTGTATTTGCTATCGT +
Preference number: 5 (lower is better)
Translates to: DVNYSKIPVNAVSQYFQVGLQCY*SCICYR
Trigger: ACGATAGCAAATACAAGACAAATAGCATTGAAGGCC...CACTTGGAAGTACTGTGAAACCGCATTCACTGGGATTTTGCTGTAATTCACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAAGATTCTCCACTCTTaGCTGGAGGTCATGGTTTTC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDKILHS*LEVMVF
Trigger: GAAAACCATGACCTCCAGCAAAGAGTGGAGAATCTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGATGTGCATTTCGGCTTTaGATCTTGAAGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGCAFRL*ILKKTL
Trigger: CAAAGTCTTCTTCAAGATCAAAAGCCGAAATGCACA...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TGGACCAAGGGACTTGCATTCCGGGAAAATACAGTTAAGCACACTAGATATTATTGTGCATTTCGGCTTTaGATCTTGAAGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: WTKGLAFRENTVKHTRYYCAFRL*ILKKTL
Trigger: CAAAGTCTTCTTCAAGATCAAAAGCCGAAATGCACA...ATAATATCTAGTGTGCTTAACTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACTGTGCATTCTATTTTaGCCATGGCAACTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGLCILF*PWQLSL
Trigger: TAAACTCAGTTGCCATGGCAAAAATAGAATGCACAG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTAATGTTTAAAACTGGAACAGCTGGGCAAATCTCTAAACAGAGGCAATACATTTATGGACCAAGGGACTaGCATTCCGGGAAAATACAG +
Preference number: 5 (lower is better)
Translates to: LMFKTGTAGQISKQRQYIYGPRD*HSGKIQ
Trigger: CTGTATTTTCCCGGAATGCAAGTCCCTTGGTCCATA...AATGTATTGCCTCTGTTTAGAGATTTGCCCAGCTGTTCCAGTTTTAAACATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAATCTCAAGCCAATGTaGATGCGTGGTTCAACATCT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDNLKPM*MRGSTS
Trigger: AGATGTTGAACCACGCATCAACATTGGCTTGAGATT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTCAGGGATTTCTGCTaGGAATCTCAAGCCAATGTT +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFRDFC*ESQANV
Trigger: AACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp AAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATGGACGGCATAGTGGTAATTaGCTAAAGGATGACATTTTA +
Preference number: 5 (lower is better)
Translates to: KRVTKQAGSPGFLINEDGRHSGN*LKDDIL
Trigger: TAAAATGTCATCCTTTAGCAAATTACCACTATGCCG...TCCATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTTTCGGCTTTTGATCTaGAAGAAGACTTTGCCACAC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDFRLLI*KKTLPH
Trigger: GTGTGGCAAAGTCTTCTTCAAGATCAAAAGCCGAAA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATAACCTGTTTTCACATTaGGTCATCTCCTCACATGTC +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDNLFSH*VISSHV
Trigger: GACATGTGAGGAGATGACCAAATGTGAAAACAGGTT...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp GCTAAGGTGTATCTGAAGCCATTTTTGTTGGCCTTCAATGCTATTTGTCTTGTAGGCCTTCAATGCTATTaGTCTTGTATTTGCTATCGT +
Preference number: 5 (lower is better)
Translates to: AKVYLKPFLLAFNAICLVGLQCY*SCICYR
Trigger: ACGATAGCAAATACAAGACAAATAGCATTGAAGGCC...TACAAGACAAATAGCATTGAAGGCCAACAAAAATGGCTTCAGATACACCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATTGTGCATTTCGGCTTTaGATCTTGAAGAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDCAFRL*ILKKTL
Trigger: CAAAGTCTTCTTCAAGATCAAAAGCCGAAATGCACA...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS-3UTR CAA 90 bp TTTAAAAGGGTTACAAAACAAGCAGGCAGTCCAGGTTTCCTGATTAATGAAGATCGGCATAGTGGTAATTaGCTAAAGGATGACATTTTA +
Preference number: 5 (lower is better)
Translates to: FKRVTKQAGSPGFLINEDRHSGN*LKDDIL
Trigger: TAAAATGTCATCCTTTAGCAAATTACCACTATGCCG...ATCTTCATTAATCAGGAAACCTGGACTGCCTGCTTGTTTTGTAACCCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GGCGTCAGGGGCAGCTGCGGGTGGGCGCCAGGGCCGTaGCCGGAGATGAGGACATTGCTGAAGAGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: GVRGSCGWAPGP*PEMRTLLKSPE
Trigger: CTCGGGGCTCTTCAGCAATGTCCTCATCTCCGGCCACGGCCCTGGCGCCCACCCGCAGCTGCCCCTGACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GGGCACCTGCTGGTAGCGGGAAGGGATAGCCGGTGCTaGGGGCTCCATGGGCTTCTGAGACAGCAGCTGGCG +
Preference number: 6 (lower is better)
Translates to: GHLLVAGRDSRC*GLHGLLRQQLA
Trigger: CGCCAGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCCCGCTACCAGCAGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp GGCTTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTaGGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCA +
Preference number: 6 (lower is better)
Translates to: GFCFPEGMAPRA*VTWLVPPWMRA
Trigger: TGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp GTGCCACCAGGCTTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTaGGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCATGGCCATTC +
Preference number: 6 (lower is better)
Translates to: VPPGFCFPEGMAPRA*VTWLVPPWMRAWPF
Trigger: GAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp CTGGGGCACCTGCTGGTAGCGGGAAGGGATAGCCGGTaGTGGGGGCTCCATGGGCTTCTGAGACAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LGHLLVAGRDSR*WGLHGLLRQQL
Trigger: CAGCTGCTGTCTCAGAAGCCCATGGAGCCCCCAGCACCGGCTATCCCTTCCCGCTACCAGCAGGTGCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp TGCCGCTGCTGCAGCTGTAGCTGCTGCGGCTGCTGCTaGTGTGGCGGCGGCTGTGGCTGTGATGGGCGAATT +
Preference number: 6 (lower is better)
Translates to: CRCCSCSCCGCC*CGGGCGCDGRI
Trigger: AATTCGCCCATCACAGCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp TGCATTGAACCCTGCCGCTGCTGCAGCTGTAGCTGCTaGGGCTGCTGCTGCTGTGGCGGCGGCTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: CIEPCRCCSCSC*GCCCCGGGCGC
Trigger: ACAGCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAATGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp ATCTGCATTGAACCCTGCCGCTGCTGCAGCTGTAGCTaGTGCGGCTGCTGCTGCTGTGGCGGCGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: ICIEPCRCCSCS*CGCCCCGGGCG
Trigger: GCCACAGCCGCCGCCACAGCAGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAATGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CGTCGCTCACACCTTGACCTCCGCAGATGGCTGAGTTaGGGGCCTGGTTCTGGGGGCTTCTCCTGCGGTCGG +
Preference number: 6 (lower is better)
Translates to: RRSHLDLRRWLS*GPGSGGFSCGR
Trigger: CCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CAGAGGGGATGGCACCTCGGGCCTTGGTCACCTGGTTaGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTG +
Preference number: 6 (lower is better)
Translates to: QRGWHLGPWSPG*CPRGCGHGHSV
Trigger: CACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TTCCCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTaGTTGGTGCCCCCGTGGATGCGGGCATGGCCATTC +
Preference number: 6 (lower is better)
Translates to: FPEGMAPRALVT*LVPPWMRAWPF
Trigger: GAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GCTTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTTaGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCAT +
Preference number: 6 (lower is better)
Translates to: ASASQRGWHLGP*SPGWCPRGCGH
Trigger: ATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GAGCACAGGCATCTCGTCGTCCGACATCGAGCTGGCTaGCTTGTCTCTGGCGGAGGGGGCGGCAACGGTGCT +
Preference number: 6 (lower is better)
Translates to: EHRHLVVRHRAG*LVSGGGGGNGA
Trigger: AGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TCACGAGCACAGGCATCTCGTCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGGAGGGGGCGGCAACGG +
Preference number: 6 (lower is better)
Translates to: SRAQASRRPTSS*LACLWRRGRQR
Trigger: CCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS CAA 72 bp CCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGT +
Preference number: 6 (lower is better)
Translates to: PEGMAPRALVTW*VPPWMRAWPFS
Trigger: ACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp TTCTGCTTCCCAGAGGGGATGGCACCTCGGGCCTTGGTCACCTGGTaGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTGCCTGTCGG +
Preference number: 6 (lower is better)
Translates to: FCFPEGMAPRALVTW*VPPWMRAWPFSACR
Trigger: CCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CTCACGAGCACAGGCATCTCGTCGTCCGACATCGAGCTGGCTGGCTaGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGGTGAACCCC +
Preference number: 6 (lower is better)
Translates to: LTSTGISSSDIELAG*SLAEGAATVLLVNP
Trigger: GGGGTTCACCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS TCA 72 bp GGAGACGTCGCTCACACCTTGACCTCCGCAGATGGCTaGGTTGGGGGCCTGGTTCTGGGGGCTTCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: GDVAHTLTSADG*VGGLVLGASPA
Trigger: CGCAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACGTCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GCGATGGGGGAGGGTGCTGCTGACCCGGGTCAGATCTaGGCTCGCTGGGTCTCCCATTCCTGTGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: AMGEGAADPGQI*ARWVSHSCVRR
Trigger: CCTCCTGACACAGGAATGGGAGACCCAGCGAGCTCAGATCTGACCCGGGTCAGCAGCACCCTCCCCCATCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GTCTTGAGGGGCTCCTCGGCTTTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCAGCAGGCGTGCGGGGG +
Preference number: 6 (lower is better)
Translates to: VLRGSSALGTLG*CFLGISAGVRG
Trigger: CCCCCGCACGCCTGCTGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCCTCAAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541110.5
CDS GCA 72 bp GTTGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACACAGCCCCACAGTTGGG +
Preference number: 6 (lower is better)
Translates to: VGAPVDAGMAIQ*LSGAEHSPTVG
Trigger: CCCAACTGTGGGGCTGTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TTTCGAGCACAGGCATCTCGTCGTCCGACATCGAGCTaGCTGGCTTGTCTCTGGCGGAGGGGGCGGCAACGG +
Preference number: 6 (lower is better)
Translates to: FRAQASRRPTSS*LACLWRRGRQR
Trigger: CCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGAAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS CAA 90 bp TGCTGGACGACGTCGTCGTCGAGGATGTCCACATCCTTGATGGGTTaGATCAGACTCAGCTGGTCCAGGGGCAGCAGCCCCGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: CWTTSSSRMSTSLMG*IRLSWSRGSSPGAP
Trigger: GGGGGCGCCGGGGCTGCTGCCCCTGGACCAGCTGAGTCTGATCAAACCCATCAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp GAGGGCGGCGGCGGGATGAAGAGAGGTTCCGGCCGGTaGCGGAACTTTTTCTTCTCCTGCACGGTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: EGGGGMKRGSGR*RNFFFSCTVLR
Trigger: CCTCAAGACCGTGCAGGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTCTCTTCATCCCGCCGCCGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp GTTGGTGCCCCCGTGGATGCGGGCATGGCCATTCAGTaGCTGTCGGGAGCTGAACACCTGGGGAAGAAAGGG +
Preference number: 6 (lower is better)
Translates to: VGAPVDAGMAIQ*LSGAEHLGKKG
Trigger: CCCTTTCTTCCCCAGGTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS GCA 72 bp ACCGAACAGTACCCACTCTGGGTGCCACCAGGCTTCTaGTTCCCAGAGGGGATGGCACCTCGGGCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: TEQYPLWVPPGF*FPEGMAPRALV
Trigger: GACCAAGGCCCGAGGTGCCATCCCCTCTGGGAAGCAGAAGCCTGGTGGCACCCAGAGTGGGTACTGTTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GTGAGGAGACGTCGCTCACACCTTGACCTCCGCAGATaGCTGAGTTGGGGGCCTGGTTCTGGGGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VRRRRSHLDLRR*LSWGPGSGGFS
Trigger: GGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGCGGAGGTCAAGGTGTGAGCGACGTCTCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CCTTTGGGTTGGCCACTTGACTCAGGGGACCCTGGCTaGGCTCTCCCATCAGGTAGGTGCATCTGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: PLGWPLDSGDPG*ALPSGRCIWGH
Trigger: GTGGCCCCAGATGCACCTACCTGATGGGAGAGCCCAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TTGGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGGGAGCTGAACACCTGG +
Preference number: 6 (lower is better)
Translates to: LVTWLVPPWMRA*PFSACRELNTW
Trigger: CCAGGTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS CCA 72 bp TTGGTCACCTGGTTGGTGCCCCCGTGGATGCGGGCATaGCCATTCAGTGCCTGTCGGGAGCTGAACACAGCC +
Preference number: 6 (lower is better)
Translates to: LVTWLVPPWMRA*PFSACRELNTA
Trigger: GGCTGTGTTCAGCTCCCGACAGGCACTGAATGGCCATGCCCGCATCCACGGGGGCACCAACCAGGTGACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp CTGGGTCCGGATCTCGCTGGCCTGGGAGTAGGTGTATaGGTAGCCATCAGTGGGCTCAGCCCGCTGTGGACG +
Preference number: 6 (lower is better)
Translates to: LGPDLAGLGVGV*VAISGLSPLWT
Trigger: CGTCCACAGCGGGCTGAGCCCACTGATGGCTACCAATACACCTACTCCCAGGCCAGCGAGATCCGGACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372917.8
CDS CAA 90 bp ATTTCGAGCACAGGCATCTCGTCGTCCGACATCGAGCTGGCTGGCTaGTCTCTGGCGGAGGGGGCGGCAACGGTGCTGTTGGTGAACCCC +
Preference number: 6 (lower is better)
Translates to: ISSTGISSSDIELAG*SLAEGAATVLLVNP
Trigger: GGGGTTCACCAACAGCACCGTTGCCGCCCCCTCCGCCAGAGACAAGCCAGCCAGCTCGATGTCGGACGACGAGATGCCTGTGCTCGAAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS TCA 72 bp GGGGTCTGTCTCGCCGCTGGTGGTGCTGTGAGAGGGTaGGCTCTTTACCGAACAGTACCCACTCTGGGTGCC +
Preference number: 6 (lower is better)
Translates to: GVCLAAGGAVRG*ALYRTVPTLGA
Trigger: GGCACCCAGAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TTGGGGGAGGCCCTCATTCCCCCGTGGGACCGCATGTaGCCATTCAGGGCAGGCAGGTTCTTGAACTCCTTC +
Preference number: 6 (lower is better)
Translates to: LGEALIPPWDRM*PFRAGRFLNSF
Trigger: GAAGGAGTTCAAGAACCTGCCTGCCCTGAATGGCCACATGCGGTCCCACGGGGGAATGAGGGCCTCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp ACAGTCTGCTCTCCAGGCCCTGGGGTGACCGTCACGTaGCTGCCATCGATGCTGTTGGAGCGACACAGCAGC +
Preference number: 6 (lower is better)
Translates to: TVCSPGPGVTVT*LPSMLLERHSS
Trigger: GCTGCTGTGTCGCTCCAACAGCATCGATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CCTCCCAACTGCTGGACGACGTCGTCGTCGAGGATGTCCACATCCTaGATGGGTTTGATCAGACTCAGCTGGTCCAGGGGCAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PPNCWTTSSSRMSTS*MGLIRLSWSRGSSP
Trigger: GGGGCTGCTGCCCCTGGACCAGCTGAGTCTGATCAAACCCATCAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCAGTTGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GCCGGTGCCGGAACTTTTTCTTCTCCTGCACGGTCTTaGGGGGCTCCTCGGCTTTGGGCACACTCGGCTGAT +
Preference number: 6 (lower is better)
Translates to: AGAGTFSSPARS*GAPRLWAHSAD
Trigger: ATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTTCCGGCACCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GTCTTGAGGGGCTCCTCGGCTTTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCGAGCACAGGCATCTCG +
Preference number: 6 (lower is better)
Translates to: VLRGSSALGTLG*CFLGISSTGIS
Trigger: CGAGATGCCTGTGCTCGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCCTCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372922.8
CDS GCA 72 bp GTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATGCTaGTTTCATGCTGCTGGACAGGTGGGAAGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: VLGASPAVGQSC*FHAAGQVGRGG
Trigger: GCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp CGAGGCCTGAGGGGCATCCATTCCGCCCCCTGTAACTaGATTCCCATAGTTGTGGTTCAGCCCGCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: RGLRGIHSAPCN*IPIVVVQPAVD
Trigger: GTCCACAGCGGGCTGAACCACAACTATGGGAATGCAGTTACAGGGGGCGGAATGGATGCCCCTCAGGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp GGACATGGAGCCCAGGGGAATCAGCTGGACAGTGTGTaGCTGCTCTGGGGTATACTGGTGAGGGTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: GHGAQGNQLDSV*LLWGILVRVPV
Trigger: CACAGGGACCCTCACCAGTATACCCCAGAGCAGGCACACACTGTCCAGCTGATTCCCCTGGGCTCCATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp AGAGGTTCCGGCCGGTGCCGGAACTTTTTCTTCTCCTaGACGGTCTTGAGGGGCTCCTCGGCTTTGGGCACA +
Preference number: 6 (lower is better)
Translates to: RGSGRCRNFFFS*TVLRGSSALGT
Trigger: TGTGCCCAAAGCCGAGGAGCCCCTCAAGACCGTGCAGGAGAAGAAAAAGTTCCGGCACCGGCCGGAACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AGGGCTGCTGGGGCTCCTGGTAGTAGTACTGGGACATaGAGCCCAGGGGAATCAGCTGGACAGTGTGTGCCT +
Preference number: 6 (lower is better)
Translates to: RAAGAPGSSTGT*SPGESAGQCVP
Trigger: AGGCACACACTGTCCAGCTGATTCCCCTGGGCTCCATGTCCCAGTACTACTACCAGGAGCCCCAGCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TGCAGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTaGTGGTGCTGTGAGAGGGTGAGCTCTTTACCGAAC +
Preference number: 6 (lower is better)
Translates to: CRGRWWWGLSRR*WCCERVSSLPN
Trigger: GTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AGACTTTGCCACACTCCTTGCAGGGGAAGATGGTGGTaGGGTCTGTCTCGCCGCTGGTGGTGCTGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: RLCHTPCRGRWW*GLSRRWWCCER
Trigger: CCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCTGCAAGGAGTGTGGCAAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp TGGCACCTGAGCCAGAGGCTGCTGGTAGTCATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGACCTGAAGAGCTGGTTTGGACAGCCC +
Preference number: 6 (lower is better)
Translates to: WHLSQRLLVVIIQVP*GRVLPDLKSWFGQP
Trigger: GGGCTGTCCAAACCAGCTCTTCAGGTCGGGCAGCACCCTACCCAAGGGCACCTGTATTATGACTACCAGCAGCCTCTGGCTCAGGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GTCTTGAGGGGCTCCTCGGCTTTGGGCACACTCGGCTaGTGCTTCCTGGGGATTTCCTGTTTGAGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: VLRGSSALGTLG*CFLGISCLRLG
Trigger: CCCCAACCTCAAACAGGAAATCCCCAGGAAGCATCAGCCGAGTGTGCCCAAAGCCGAGGAGCCCCTCAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS TCA 72 bp ATGGTGGTGGGGTCTGTCTCGCCGCTGGTGGTGCTGTaGGAGGGTGAGCTCTTTACCGAACAGTACCCACTC +
Preference number: 6 (lower is better)
Translates to: MVVGSVSPLVVL*EGELFTEQYPL
Trigger: GAGTGGGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp CTGGTTCTGGGGGCTTCTCCTGCGGTCGGCCAATCATaGTGCTTTCATGCTGCTGGACAGGTGGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: LVLGASPAVGQS*CFHAAGQVGRG
Trigger: TCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGAGAAGCCCCCAGAACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp GGAAGATGGTGGTGGGGTCTGTCTCGCCGCTGGTGGTaGTGTGAGAGGGTGAGCTCTTTACCGAACAGTACC +
Preference number: 6 (lower is better)
Translates to: GRWWWGLSRRWW*CERVSSLPNST
Trigger: GGTACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TCCTGCGGTCGGCCAATCATGCTGCTTTCATGCTGCTaGACAGGTGGGAAGAGGAGGCCTGGTCGACTGCTT +
Preference number: 6 (lower is better)
Translates to: SCGRPIMLLSCC*TGGKRRPGRLL
Trigger: AAGCAGTCGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGACCGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS CCA 72 bp TCCCATCAGGTAGGTGCATCTGGGGCCACATGGCACTaGGAGACAGCTGCTGATGCTGAGGCCCCATGTTGT +
Preference number: 6 (lower is better)
Translates to: SHQVGASGATWH*ETAADAEAPCC
Trigger: ACAACATGGGGCCTCAGCATCAGCAGCTGTCTCCCAGTGCCATGTGGCCCCAGATGCACCTACCTGATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AGGGGAAGATGGTGGTGGGGTCTGTCTCGCCGCTGGTaGTGCTGTGAGAGGGTGAGCTCTTTACCGAACAGT +
Preference number: 6 (lower is better)
Translates to: RGRWWWGLSRRW*CCERVSSLPNS
Trigger: ACTGTTCGGTAAAGAGCTCACCCTCTCACAGCACCACCAGCGGCGAGACAGACCCCACCACCATCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp ACGTCGTCGTCGAGGATGTCCACATCCTTGATGGGTTaGATCAGACTCAGCTGGTCCAGGGGCAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: TSSSRMSTSLMG*IRLSWSRGSSP
Trigger: GGGGCTGCTGCCCCTGGACCAGCTGAGTCTGATCAAACCCATCAAGGATGTGGACATCCTCGACGACGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CGGGTGGTGGCTCCGGGGACTTCGGCACCTCACTCTCTTCTTCTTTaGTGGATTTCCTATCTTCTTCCGGGTCCTCCTCCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RVVAPGTSAPHSLLL*WISYLLPGPPPPPP
Trigger: AGGAGGAGGAGGAGGAGGACCCGGAAGAAGATAGGAAATCCACAAAAGAAGAAGAGAGTGAGGTGCCGAAGTCCCCGGAGCCACCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GCGGAGAGCACTGTCAGGGGCTCCATCCATCACTGCTaGCTGAGTGTGCAGCACCTGGGCCATATTGTTGAC +
Preference number: 6 (lower is better)
Translates to: AESTVRGSIHHC*LSVQHLGHIVD
Trigger: GTCAACAATATGGCCCAGGTGCTGCACACTCAGTCAGCAGTGATGGATGGAGCCCCTGACAGTGCTCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GTTCAACATCTACAGTCTGCTCTCCAGGCCCTGGGGTaGCCGTCACGTTGCTGCCATCGATGCTGTTGGAGC +
Preference number: 6 (lower is better)
Translates to: VQHLQSALQALG*PSRCCHRCCWS
Trigger: GCTCCAACAGCATCGATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp CTGCCAGGCGTGTCCGGTGTTTCCGCCCCAGCCGCATaGTCTTTTTCCACGTGTAGTAGTACTCCACGCACT +
Preference number: 6 (lower is better)
Translates to: LPGVSGVSAPAA*SFSTCSSTPRT
Trigger: AGTGCGTGGAGTACTACTACACGTGGAAAAAGATCATGCGGCTGGGGCGGAAACACCGGACACGCCTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GCGTGGTTCAACATCTACAGTCTGCTCTCCAGGCCCTaGGGTGACCGTCACGTTGCTGCCATCGATGCTGTT +
Preference number: 6 (lower is better)
Translates to: AWFNIYSLLSRP*GDRHVAAIDAV
Trigger: AACAGCATCGATGGCAGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGAACCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp TGCTGGACGACGTCGTCGTCGAGGATGTCCACATCCTaGATGGGTTTGATCAGACTCAGCTGGTCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: CWTTSSSRMSTS*MGLIRLSWSRG
Trigger: GCCCCTGGACCAGCTGAGTCTGATCAAACCCATCAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CGGCTGCGTCTGTATTTCTTGCATGGAGATACGCTGTTGCCCGGCTaGCTGCTGTTGCTGCGGTGGGTAATACTGGTGCTGCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: RLRLYFLHGDTLLPG*LLLLRWVILVLLHL
Trigger: CAGATGCAGCAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp AGTGCTGCATCATGGGTTGGGGCTGATAATACTGAGGTATCTGCATaGAACCCTGCCGCTGCTGCAGCTGTAGCTGCTGCGGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SAASWVGADNTEVSA*NPAAAAAVAAAAAA
Trigger: AGCAGCAGCCGCAGCAGCTACAGCTGCAGCAGCGGCAGGGTTCAATGCAGATACCTCAGTATTATCAGCCCCAACCCATGATGCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp AGCCATCAGTGGGCTCAGCCCGCTGTGGACGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACTACCATGGGCCACATGGTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: SHQWAQPAVDAKWWL*VEKVLTTMGHMVGL
Trigger: AAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTTCTACCAACAGCCACCACTTGGCGTCCACAGCGGGCTGAGCCCACTGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372917.8
CDS GCA 72 bp TGTGGCGGCGGCTGTGGCTGTGATGGGCGAATTTGTTaGGGCTGCGTCTGTATTTCTTGCATGGAGATACGC +
Preference number: 6 (lower is better)
Translates to: CGGGCGCDGRIC*GCVCISCMEIR
Trigger: GCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATTCGCCCATCACAGCCACAGCCGCCGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp TCCACAACTTCAGCCTCTTCCATGACACCTCCCAACTaGTGGACGACGTCGTCGTCGAGGATGTCCACATCC +
Preference number: 6 (lower is better)
Translates to: STTSASSMTPPN*WTTSSSRMSTS
Trigger: GGATGTGGACATCCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCATGGAAGAGGCTGAAGTTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GATACGCTGTTGCCCGGCTTGCTGCTGTTGCTGCGGTaGGTAATACTGGTGCTGCTGCATCTGTTGCATGTG +
Preference number: 6 (lower is better)
Translates to: DTLLPGLLLLLR*VILVLLHLLHV
Trigger: CACATGCAACAGATGCAGCAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AGCCATCAGTGGGCTCAGCCCGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAGGTTCTCACTACCATG +
Preference number: 6 (lower is better)
Translates to: SHQWAQPAVDAK*WLLVEKVLTTM
Trigger: CATGGTAGTGAGAACCTTTTCTACCAACAGCCACCACTTGGCGTCCACAGCGGGCTGAGCCCACTGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372917.8
CDS CAA 72 bp CCTCCCTGCCTCGAGGTATCCATTTGGCCAAGGTTTTaGGAGCCAACAGGCAAGCCCAGACCATCCCGTGTA +
Preference number: 6 (lower is better)
Translates to: PPCLEVSIWPRF*EPTGKPRPSRV
Trigger: TACACGGGATGGTCTGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGGCAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp ATGACTTCCCCACCCTCCCTGCCTCGAGGTATCCATTaGGCCAAGGTTTTTGGAGCCAACAGGCAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: MTSPPSLPRGIH*AKVFGANRQAQ
Trigger: CTGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGGCAGGGAGGGTGGGGAAGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp AGCCAGAGGCTGCTGGTAGTCATAATACAGGTGCCCTaGGGTAGGGTGCTGCCCGACCTGAAGAGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: SQRLLVVIIQVP*GRVLPDLKSWF
Trigger: AAACCAGCTCTTCAGGTCGGGCAGCACCCTACCCAAGGGCACCTGTATTATGACTACCAGCAGCCTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp TTGCATGGAGATACGCTGTTGCCCGGCTTGCTGCTGTaGCTGCGGTGGGTAATACTGGTGCTGCTGCATCTG +
Preference number: 6 (lower is better)
Translates to: LHGDTLLPGLLL*LRWVILVLLHL
Trigger: CAGATGCAGCAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp TTGTTCTTGGCATCAAACTGCTCCCCAAACGCTCCTTaGGGTTGGCCACTTGACTCAGGGGACCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: LFLASNCSPNAP*GWPLDSGDPGW
Trigger: CCAGCCAGGGTCCCCTGAGTCAAGTGGCCAACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp TCTAGTTCTGGCCAGGGCTTCCATACCAGTGTGGCCTaGTGTGTGTCCTGGGCCAGGGCAGAGATATCTTGG +
Preference number: 6 (lower is better)
Translates to: SSSGQGFHTSVA*CVSWARAEISW
Trigger: CCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTGGCCAGAACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp GGCGGCTGTGGCTGTGATGGGCGAATTTGTTGCGGCTaGGTCTGTATTTCTTGCATGGAGATACGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: GGCGCDGRICCG*VCISCMEIRCC
Trigger: GCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATTCGCCCATCACAGCCACAGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp AAGCCAATGTTGATGCGTGGTTCAACATCTACAGTCTaGTCTCCAGGCCCTGGGGTGACCGTCACGTTGCTG +
Preference number: 6 (lower is better)
Translates to: KPMLMRGSTSTV*SPGPGVTVTLL
Trigger: CAGCAACGTGACGGTCACCCCAGGGCCTGGAGAGCAGACTGTAGATGTTGAACCACGCATCAACATTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CTCCCTGCCTCGAGGTATCCATTTGGCCAAGGTTTTTaGAGCCAACAGGCAAGCCCAGACCATCCCGTGTAT +
Preference number: 6 (lower is better)
Translates to: LPASRYPFGQGF*SQQASPDHPVY
Trigger: ATACACGGGATGGTCTGGGCTTGCCTGTTGGCTCCAAAAACCTTGGCCAAATGGATACCTCGAGGCAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CAGGGCTTCCATACCAGTGTGGCCTTGTGTGTGTCCTaGGCCAGGGCAGAGATATCTTGGAGTTCAGGGATT +
Preference number: 6 (lower is better)
Translates to: QGFHTSVALCVS*ARAEISWSSGI
Trigger: AATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GGTTTTCTAGTTCTGGCCAGGGCTTCCATACCAGTGTaGCCTTGTGTGTGTCCTGGGCCAGGGCAGAGATAT +
Preference number: 6 (lower is better)
Translates to: GFLVLARASIPV*PCVCPGPGQRY
Trigger: ATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTGGCCAGAACTAGAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp ACAACTTCAGCCTCTTCCATGACACCTCCCAACTGCTaGACGACGTCGTCGTCGAGGATGTCCACATCCTTG +
Preference number: 6 (lower is better)
Translates to: TTSASSMTPPNC*TTSSSRMSTSL
Trigger: CAAGGATGTGGACATCCTCGACGACGACGTCGTCCAGCAGTTGGGAGGTGTCATGGAAGAGGCTGAAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp TCGGCCAATCATGCTGCTTTCATGCTGCTGGACAGGTaGGAAGAGGAGGCCTGGTCCTGTTTGAGGATGAAG +
Preference number: 6 (lower is better)
Translates to: SANHAAFMLLDR*EEEAWSCLRMK
Trigger: CTTCATCCTCAAACAGGACCAGGCCTCCTCTTCCCACCTGTCCAGCAGCATGAAAGCAGCATGATTGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp CGGCTGCGTCTGTATTTCTTGCATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTGCTGCGGTGGGTAATA +
Preference number: 6 (lower is better)
Translates to: RLRLYFLHGDTL*PGLLLLLRWVI
Trigger: TATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CCCATAGTTGTGGTTCAGCCCGCTGTGGACGCCAAGTGGTGGCTGTaGGTAGAAAAGGTTCTCACTACCATGGGCCACATGGTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: PIVVVQPAVDAKWWL*VEKVLTTMGHMVGL
Trigger: AAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTTCTACCAACAGCCACCACTTGGCGTCCACAGCGGGCTGAACCACAACTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp TCATGGTTTTCTAGTTCTGGCCAGGGCTTCCATACCAGTGTGGCCTaGTGTGTGTCCTGGGCCAGGGCAGAGATATCTTGGAGTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SWFSSSGQGFHTSVA*CVSWARAEISWSSG
Trigger: CCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTATGGAAGCCCTGGCCAGAACTAGAAAACCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp GAAGCTGAGAGAAAAGTGTCAGCACTACTCCACGGCTaGCATGTCTGTGAACGTGGCTGGAGCCAGGTGTTC +
Preference number: 6 (lower is better)
Translates to: EAERKVSALLHG*HVCERGWSQVF
Trigger: GAACACCTGGCTCCAGCCACGTTCACAGACATGTCAGCCGTGGAGTAGTGCTGACACTTTTCTCTCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp CGGGAGCTGAACACCTGGGGAAGAAAGGGAGTGACATaGCATCTACAGTCAGCCCCACAGTTGGGCATTTCA +
Preference number: 6 (lower is better)
Translates to: RELNTWGRKGVT*HLQSAPQLGIS
Trigger: TGAAATGCCCAACTGTGGGGCTGACTGTAGATGTCATGTCACTCCCTTTCTTCCCCAGGTGTTCAGCTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340840.6
CDS GCA 72 bp GATGGGCGAATTTGTTGCGGCTGCGTCTGTATTTCTTaGATGGAGATACGCTGTTGCCCGGCTTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: DGRICCGCVCIS*MEIRCCPACCC
Trigger: ACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATTCGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp TTCTTCTTCACTTGTCACACAATCGTCGATGATTTCTaGCAGGCGTGTCCGGTGTTTCCGCCCCAGCCGCAT +
Preference number: 6 (lower is better)
Translates to: FFFTCHTIVDDF*QACPVFPPQPH
Trigger: ATGCGGCTGGGGCGGAAACACCGGACACGCCTGGCAGAAATCATCGACGATTGTGTGACAAGTGAAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CTACCATGGGCCACATGGTTGGTCTTGTACAGTTGCTaGTCACCCATGCTGTCTGCCTTGGTTGTGAACGTC +
Preference number: 6 (lower is better)
Translates to: LPWATWLVLYSC*SPMLSALVVNV
Trigger: GACGTTCACAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CCCATAGTTGTGGTTCAGCCCGCTGTGGACGCCAAGTaGTGGCTGTTGGTAGAAAAGGTTCTCACTACCATG +
Preference number: 6 (lower is better)
Translates to: PIVVVQPAVDAK*WLLVEKVLTTM
Trigger: CATGGTAGTGAGAACCTTTTCTACCAACAGCCACCACTTGGCGTCCACAGCGGGCTGAACCACAACTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp CTGTATTTCTTGCATGGAGATACGCTGTTGCCCGGCTaGCTGCTGTTGCTGCGGTGGGTAATACTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LYFLHGDTLLPG*LLLLRWVILVL
Trigger: CAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp GCTCCGGGGACTTCGGCACCTCACTCTCTTCTTCTTTaGTGGATTTCCTATCTTCTTCCGGGTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: APGTSAPHSLLL*WISYLLPGPPP
Trigger: AGGAGGAGGACCCGGAAGAAGATAGGAAATCCACAAAAGAAGAAGAGAGTGAGGTGCCGAAGTCCCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp GAAAAGGTTCTCACTACCATGGGCCACATGGTTGGTCTTGTACAGTaGCTGGTCACCCATGCTGTCTGCCTTGGTTGTGAACGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: EKVLTTMGHMVGLVQ*LVTHAVCLGCERPA
Trigger: GGCTGGACGTTCACAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp ATTCGCAGGTTTTGGTTGGCAAACACCTGGGTGAAAGAGTCCAGCTaGTGTAAGACACCGCTGGTAAGCTTCTGGGTCCGGATCTCGCTG +
Preference number: 6 (lower is better)
Translates to: IRRFWLANTWVKESS*CKTPLVSFWVRISL
Trigger: CAGCGAGATCCGGACCCAGAAGCTTACCAGCGGTGTCTTACACAAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCAAAACCTGCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp CTGTATTTCTTGCATGGAGATACGCTGTTGCCCGGCTTGCTGCTGTaGCTGCGGTGGGTAATACTGGTGCTGCTGCATCTGTTGCATGTG +
Preference number: 6 (lower is better)
Translates to: LYFLHGDTLLPGLLL*LRWVILVLLHLLHV
Trigger: CACATGCAACAGATGCAGCAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp AATTTGTTGCGGCTGCGTCTGTATTTCTTGCATGGAGATACGCTGTaGCCCGGCTTGCTGCTGTTGCTGCGGTGGGTAATACTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: NLLRLRLYFLHGDTL*PGLLLLLRWVILVL
Trigger: CAGCACCAGTATTACCCACCGCAGCAACAGCAGCAAGCCGGGCAACAGCGTATCTCCATGCAAGAAATACAGACGCAGCCGCAACAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp GCAGGCAGGTTCTTGAACTCCTTCAGGCAGATGGAGCATGTCAGCTaGTTCTTGGCATCAAACTGCTCCCCAAACGCTCCTTTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: AGRFLNSFRQMEHVS*FLASNCSPNAPLGW
Trigger: CCAACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGTTCAAGAACCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp CTCACTACCATGGGCCACATGGTTGGTCTTGTACAGTaGCTGGTCACCCATGCTGTCTGCCTTGGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: LTTMGHMVGLVQ*LVTHAVCLGCE
Trigger: TTCACAACCAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp TTTTGGTTGGCAAACACCTGGGTGAAAGAGTCCAGCTaGTGTAAGACACCGCTGGTAAGCTTCTGGGTCCGG +
Preference number: 6 (lower is better)
Translates to: FWLANTWVKESS*CKTPLVSFWVR
Trigger: CCGGACCCAGAAGCTTACCAGCGGTGTCTTACACAAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp AGGTTCTTGAACTCCTTCAGGCAGATGGAGCATGTCAGCTTGTTCTaGGCATCAAACTGCTCCCCAAACGCTCCTTTGGGTTGGCCACTT +
Preference number: 6 (lower is better)
Translates to: RFLNSFRQMEHVSLF*ASNCSPNAPLGWPL
Trigger: AAGTGGCCAACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGTTCAAGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp CTGCTGACTGAGTGTGCAGCACCTGGGCCATATTGTTaGCCTGAATTCGCAGGTTTTGGTTGGCAAACACCT +
Preference number: 6 (lower is better)
Translates to: LLTECAAPGPYC*PEFAGFGWQTP
Trigger: AGGTGTTTGCCAACCAAAACCTGCGAATTCAGGTCAACAATATGGCCCAGGTGCTGCACACTCAGTCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp ACTCTTCTTCTTCTTCACTTGTCACACAATCGTCGATaGTTTCTGCCAGGCGTGTCCGGTGTTTCCGCCCCA +
Preference number: 6 (lower is better)
Translates to: TLLLLHLSHNRR*FLPGVSGVSAP
Trigger: TGGGGCGGAAACACCGGACACGCCTGGCAGAAATCATCGACGATTGTGTGACAAGTGAAGAAGAAGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GGTAGAAAAGGTTCTCACTACCATGGGCCACATGGTTaGTCTTGTACAGTTGCTGGTCACCCATGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GRKGSHYHGPHG*SCTVAGHPCCL
Trigger: CAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp ACTCCTTCAGGCAGATGGAGCATGTCAGCTTGTTCTTaGCATCAAACTGCTCCCCAAACGCTCCTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: TPSGRWSMSACS*HQTAPQTLLWV
Trigger: AACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp AAAAGGTTCTCACTACCATGGGCCACATGGTTGGTCTaGTACAGTTGCTGGTCACCCATGCTGTCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: KRFSLPWATWLV*YSCWSPMLSAL
Trigger: CAAGGCAGACAGCATGGGTGACCAGCAACTGTACAAGACCAACCATGTGGCCCATGGTAGTGAGAACCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp AACTCCTTCAGGCAGATGGAGCATGTCAGCTTGTTCTaGGCATCAAACTGCTCCCCAAACGCTCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: NSFRQMEHVSLF*ASNCSPNAPLG
Trigger: ACCCAAAGGAGCGTTTGGGGAGCAGTTTGATGCCAAGAACAAGCTGACATGCTCCATCTGCCTGAAGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp TACCAGTGTGGCCTTGTGTGTGTCCTGGGCCAGGGCAGAGATATCTaGGAGTTCAGGGATTTCTGCTTGGAATCTCAAGCCAATGTTGAT +
Preference number: 6 (lower is better)
Translates to: YQCGLVCVLGQGRDI*EFRDFCLESQANVD
Trigger: ATCAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGACACACACAAGGCCACACTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp CACCTGGGCCATATTGTTGACCTGAATTCGCAGGTTTaGGTTGGCAAACACCTGGGTGAAAGAGTCCAGCTT +
Preference number: 6 (lower is better)
Translates to: HLGHIVDLNSQV*VGKHLGERVQL
Trigger: AAGCTGGACTCTTTCACCCAGGTGTTTGCCAACCAAAACCTGCGAATTCAGGTCAACAATATGGCCCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp GCTGTAAAATATTCCAACACCAAGAACTCCCGAGAAGCGACCTGTTaGAGGATGAAGAGGCTGAATCTTTCAGGGTCGTCCTGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: AVKYSNTKNSREATC*RMKRLNLSGSSCFC
Trigger: GCAGAAGCAGGACGACCCTGAAAGATTCAGCCTCTTCATCCTCAAACAGGTCGCTTCTCGGGAGTTCTTGGTGTTGGAATATTTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
CDS CAA 90 bp GTCCTGGGCCAGGGCAGAGATATCTTGGAGTTCAGGGATTTCTGCTaGGAATCTCAAGCCAATGTTGATGCGTGGTTCAACATCTACAGT +
Preference number: 6 (lower is better)
Translates to: VLGQGRDILEFRDFC*ESQANVDAWFNIYS
Trigger: ACTGTAGATGTTGAACCACGCATCAACATTGGCTTGAGATTCCAAGCAGAAATCCCTGAACTCCAAGATATCTCTGCCCTGGCCCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 90 bp ACATCACCTTTGGCCTCAAACAGAGAGTGCAAAGCAAATTCAGAATaGGTCCCTCCACCTGGCAATGCACTGGAACAGCACAAATTCAGA +
Preference number: 6 (lower is better)
Translates to: TSPLASNRECKANSE*VPPPGNALEQHKFR
Trigger: TCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACTCTCTGTTTGAGGCCAAAGGTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp CAAAGCAAATTCAGAATTGGTCCCTCCACCTGGCAATaGACTGGAACAGCACAAATTCAGAAGATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: QSKFRIGPSTWQ*TGTAQIQKILH
Trigger: GTGGAGAATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS GCA 72 bp CTGTTGTTCCTCCTGCTGCCTGTGAGTTTTCATGTGTaGATTTCGGCTTTTGATCTTGAAGAAGACTTTGCC +
Preference number: 6 (lower is better)
Translates to: LLFLLLPVSFHV*ISAFDLEEDFA
Trigger: GGCAAAGTCTTCTTCAAGATCAAAAGCCGAAATGCACACATGAAAACTCACAGGCAGCAGGAGGAACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AAATTCAGAAGATTCTCCACTCTTTGCTGGAGGTCATaGTTTTCTAGTTCTGGCCAGGGCTTCCATACCAGT +
Preference number: 6 (lower is better)
Translates to: KFRRFSTLCWRS*FSSSGQGFHTS
Trigger: ACTGGTATGGAAGCCCTGGCCAGAACTAGAAAACCATGACCTCCAGCAAAGAGTGGAGAATCTTCTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp CAAATTCAGAATTGGTCCCTCCACCTGGCAATGCACTaGAACAGCACAAATTCAGAAGATTCTCCACTCTTT +
Preference number: 6 (lower is better)
Translates to: QIQNWSLHLAMH*NSTNSEDSPLF
Trigger: AAAGAGTGGAGAATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp AGAGTGCAAAGCAAATTCAGAATTGGTCCCTCCACCTaGCAATGCACTGGAACAGCACAAATTCAGAAGATT +
Preference number: 6 (lower is better)
Translates to: RVQSKFRIGPST*QCTGTAQIQKI
Trigger: AATCTTCTGAATTTGTGCTGTTCCAGTGCATTGCCAGGTGGAGGGACCAATTCTGAATTTGCTTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CCA 72 bp GTAGCAGCATTTCCAGAGCAACCATCACATCACCTTTaGCCTCAAACAGAGAGTGCAAAGCAAATTCAGAAT +
Preference number: 6 (lower is better)
Translates to: VAAFPEQPSHHL*PQTESAKQIQN
Trigger: ATTCTGAATTTGCTTTGCACTCTCTGTTTGAGGCCAAAGGTGATGTGATGGTTGCTCTGGAAATGCTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS CAA 72 bp AGTAGCAGCATTTCCAGAGCAACCATCACATCACCTTaGGCCTCAAACAGAGAGTGCAAAGCAAATTCAGAA +
Preference number: 6 (lower is better)
Translates to: SSSISRATITSP*ASNRECKANSE
Trigger: TTCTGAATTTGCTTTGCACTCTCTGTTTGAGGCCAAAGGTGATGTGATGGTTGCTCTGGAAATGCTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5
CDS TCA 72 bp CATAGTGGTAATTTGCTAAAGGATGACATTTTAACCTaGCAGGCTTCCGCAGTAGCAGCATTTCCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: HSGNLLKDDILT*QASAVAAFPEQ
Trigger: TTGCTCTGGAAATGCTGCTACTGCGGAAGCCTGTCAGGTTAAAATGTCATCCTTTAGCAAATTACCACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340840.6
ENST00000354325.2
ENST00000372917.8
ENST00000372922.8
ENST00000541110.5