Pregenerated sensors for TREML4 (Homo sapiens)
Ensembl gene IDs: ENSG00000188056Ensembl transcript IDs: ENST00000341495.7, ENST00000448827.6, ENST00000461240.1
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGGCTGGCATTCAGCTGCTATGCACTGGTACCTCAAATCTGTTaGTCATGGTGGACCCCCATTCTGAGTGGTGAATCCCAGTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: TGLAFSCYALVPQIC*SWWTPILSGESQSH Trigger: GTGAGACTGGGATTCACCACTCAGAATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR GCA 90 bp | ATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTaGTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCC | + |
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Preference number: 1 (lower is better) Translates to: MELSLWWSFTGLAFS*YALVPQICCSWWTP Trigger: GGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR GCA 90 bp | GCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATaGACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTCT | + |
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Preference number: 1 (lower is better) Translates to: ALFMVVFYRAGIQLL*TGTSNLLLMVDPHS Trigger: AGAATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR CCA 90 bp | AGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTaGCATTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: SKRTWSSLYGGLLQG*HSAAMHWYLKSVAH Trigger: ATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGCAGAAACCTCGTCACTaGTGTCCTGTGGCACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VISLSFRISGVGREEGEGQKPRH*CPVAPA Trigger: TGCAGGTGCCACAGGACAGCAGTGACGAGGTTTCTG...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTGAATCTGGGGCCACCTaGGCCAAGGCAGGCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFWATESPAHVILTHLIFESGAT*AKAGRG Trigger: GCCCCTGCCTGCCTTGGCTCAGGTGGCCCCAGATTC...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGCAGAAACCTCGTCACTaGTGTCCTGTGGCACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ELSLWWSFTGLAFSCYALQKPRH*CPVAPA Trigger: TGCAGGTGCCACAGGACAGCAGTGACGAGGTTTCTG...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTTTAGGATATCTGGGGTaGGACGGGAGGAAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: FSCYALVPQICCSWWTPILGYLG*DGRKVR Trigger: CCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAA...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGTTCTGGGTCCTGTTTTaGGCCACTGAGTCGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ELSLWWSFTGLAFSCYALFWVLF*ATESPA Trigger: AGCAGGCGACTCAGTGGCCCAAAACAGGACCCAGAA...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTGGGACGGGAGGAAGGTaGGGGGATACAACTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: RAKEHGALFMVVFYRAGIGTGGR*GDTTAV Trigger: GACAGCAGTTGTATCCCCTCACCTTCCTCCCGTCCC...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGTGCGAAGCCAGTCTCTaGTGCCATAAAGGTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: ELSLWWSFTGLAFSCYALCEASL*CHKGWG Trigger: TCCCCAACCTTTATGGCACCAGAGACTGGCTTCGCA...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTGTCACTGCTGTCCTGTaGCACCTGCAGATCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RAKEHGALFMVVFYRAGIVTAVL*HLQIRS Trigger: GCTCCTGATCTGCAGGTGCCACAGGACAGCAGTGAC...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAATACAACTGCTGTCTTaGTCAGCTGCCCCTGACACA | + |
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Preference number: 2 (lower is better) Translates to: TKCIRVVASERKASGHREIQLLS*SAAPDT Trigger: TGTGTCAGGGGCAGCTGAGCAAGACAGCAGTTGTAT...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTGTCACTGCTGTCCTGTaGCACCTGCAGATCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LFWATESPAHVILTHLIFVTAVL*HLQIRS Trigger: GCTCCTGATCTGCAGGTGCCACAGGACAGCAGTGAC...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACTTCCTCACAAGGAGGTaGGGAGCAATACTTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYFLTRR*GAILRP Trigger: TGGCCTAAGTATTGCTCCCCACCTCCTTGTGAGGAA...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAATCTGTTGCTCATGGTaGACCCCCATTCTGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: TKCIRVVASERKASGHREICCSW*TPILSG Trigger: ACCACTCAGAATGGGGGTCCACCATGAGCAACAGAT...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAGAGCTCTCTTTATGGTaGTCTTTTACAGGGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TKCIRVVASERKASGHREELSLW*SFTGLA Trigger: TGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTATGGAGCTCTCTTTATaGTGGTCTTTTACAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: FSCYALVPQICCSWWTPIMELSL*WSFTGL Trigger: CAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCAT...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTGCAGGCAGGGGCTCTTaGTTTCCTCCAAGTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: IIIYLAPCSITQLRLFLPAGRGS*FPPSPW Trigger: CCATGGACTTGGAGGAAATCAAGAGCCCCTGCCTGC...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTAATACAACTGCTGTCTTaGTCAGCTGCCCCTGACACA | + |
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Preference number: 2 (lower is better) Translates to: GLCICAQQGVRQAYEKGLIQLLS*SAAPDT Trigger: TGTGTCAGGGGCAGCTGAGCAAGACAGCAGTTGTAT...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTACAAAGCAAAAGCGATaGCTCTCACAGATAGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: FSCYALVPQICCSWWTPITKQKR*LSQIGD Trigger: ATCACCTATCTGTGAGAGGCATCGCTTTTGCTTTGT...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTTTCCTCACAAGGAGGTaGGGAGCAATACTTAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LFWATESPAHVILTHLIFFLTRR*GAILRP Trigger: TGGCCTAAGTATTGCTCCCCACCTCCTTGTGAGGAA...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAAGAACGACAGAGTGCTaGAGAGGAGCCTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLRTTEC*RGAWAQ Trigger: CTGTGCCCAGGCTCCTCTCCAGCACTCTGTCGTTCT...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTTTAGGATATCTGGGGTaGGACGGGAGGAAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: IIIYLAPCSITQLRLFLPLGYLG*DGRKVR Trigger: CCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAA...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTCTGGGTCCTGTTTTaGGCCACTGAGTCGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CICAQQGVRQAYEKGLSQFWVLF*ATESPA Trigger: AGCAGGCGACTCAGTGGCCCAAAACAGGACCCAGAA...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTTCCAGTCTGCTaGTTACAGCCTTTCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: RAKEHGALFMVVFYRAGIQLPVC*LQPFLV Trigger: AACTAAGAAAGGCTGTAATCAGCAGACTGGAAGCTG...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTCAGCTTCCAGTCTGCTaGTTACAGCCTTTCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LFWATESPAHVILTHLIFQLPVC*LQPFLV Trigger: AACTAAGAAAGGCTGTAATCAGCAGACTGGAAGCTG...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAGGGCTGGCATTCAGCTaGTATGCACTGGTACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLGLAFS*YALVPQ Trigger: TTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCC...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAGAAGCCAGTCTCTGGTaGCATAAAGGTTGGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLEASLW*HKGWGL Trigger: CAGTCCCCAACCTTTATGGCACCAGAGACTGGCTTC...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTTCATGTGGCAGGAGCTaGGATATACACGAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: IIIYLAPCSITQLRLFLPSCGRS*DIHEET Trigger: AGTCTCTTCGTGTATATCTCAGCTCCTGCCACATGA...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR GCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTGGAAAAATTGTCTTCTaGGAAGCCAGTCTCTGGTGC | + |
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Preference number: 2 (lower is better) Translates to: IIIYLAPCSITQLRLFLPGKIVF*EASLWC Trigger: GCACCAGAGACTGGCTTCGCAGAAGACAATTTTTCC...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATTCTCTTTTAGGCTGTaGATCTTCTCACATGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: GLCICAQQGVRQAYEKGLFSFRL*IFSHVK Trigger: CTTAACATGTGAGAAGATTCACAGCCTAAAAGAGAA...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAAAGCACTGAAAAGAAGTaGGCTGTGTATATGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: CICAQQGVRQAYEKGLSQSTEKK*AVYMCP Trigger: TGGGCACATATACACAGCCCACTTCTTTTCAGTGCT...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTGATTCCATTTACGGATaGATGTTCTGGGTCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: IIIYLAPCSITQLRLFLPDSIYG*MFWVLF Trigger: AAACAGGACCCAGAACATTCATCCGTAAATGGAATC...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAATGGAGCTCTCTTTATaGTGGTCTTTTACAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLMELSL*WSFTGL Trigger: CAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCAT...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR GCA 72 bp | GCATTCAGCTGCTATGCACTGGTACCTCAAATCTGTTaGTCATGGTGGACCCCCATTCTGAGTGGTGAATCC | + |
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Preference number: 3 (lower is better) Translates to: AFSCYALVPQIC*SWWTPILSGES Trigger: GGATTCACCACTCAGAATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR CCA 72 bp | TGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTaGACCCCCATTCTGAGTGGTGAATCCCAGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: CYALVPQICCSW*TPILSGESQSH Trigger: GTGAGACTGGGATTCACCACTCAGAATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR CCA 72 bp | AGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATaGTGGACCCCCATTCTGAGTGGTGAATCCCAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SCYALVPQICCS*WTPILSGESQS Trigger: AGACTGGGATTCACCACTCAGAATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CAA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTGGCAGGCAGGGGCTCTaGATTTCCTCCAAGTCCATG | + |
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Preference number: 3 (lower is better) Translates to: RAKEHGALFMVVFYRAGIGRQGL*ISSKSM Trigger: CATGGACTTGGAGGAAATCAAGAGCCCCTGCCTGCC...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR GCA 72 bp | ATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATaGACTGGTACCTCAAATCTGTTGCTCATGGTGGAC | + |
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Preference number: 3 (lower is better) Translates to: MVVFYRAGIQLL*TGTSNLLLMVD Trigger: GTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR GCA 72 bp | TCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTaGTATGCACTGGTACCTCAAATCTGTTGCTCATGG | + |
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Preference number: 3 (lower is better) Translates to: SLWWSFTGLAFS*YALVPQICCSW Trigger: CCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR GCA 72 bp | CTTGATTTCCTCCAAGTCCATGGAAAAATTGTCTTCTaGGAAGCCAGTCTCTGGTGCCATAAAGGTTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LDFLQVHGKIVF*EASLWCHKGWG Trigger: TCCCCAACCTTTATGGCACCAGAGACTGGCTTCGCAGAAGACAATTTTTCCATGGACTTGGAGGAAATCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| 3UTR CCA 72 bp | TTTAAGTCATTTCTCTCTCATTTAGGATATCTGGGGTaGGACGGGAGGAAGGTGAGGGGATACAACTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: FKSFLSHLGYLG*DGRKVRGYNCC Trigger: ACAGCAGTTGTATCCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGACTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR CCA 72 bp | ACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTaGCATTCAGCTGCTATGCACTGGTACCTCAAATCT | + |
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Preference number: 3 (lower is better) Translates to: TWSSLYGGLLQG*HSAAMHWYLKS Trigger: AGATTTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR TCA 72 bp | ATGCACTGTGGGATATGTACGCAATGGAATAAGCACTaGAAAGAAGTGGGCTGTGTATATGTGCCCAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: MHCGICTQWNKH*KEVGCVYVPSK Trigger: CTTGCTGGGCACATATACACAGCCCACTTCTTTTCAGTGCTTATTCCATTGCGTACATATCCCACAGTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| 3UTR-3UTR CAA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTTTAAGTAAACAGAATTaGGGCCCCAGATTATCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FSCYALVPQICCSWWTPILSKQN*GPRLSD Trigger: ATCTGATAATCTGGGGCCCAAATTCTGTTTACTTAA...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTAAGTCCATGGAAAAATaGTCTTCTGCGAAGCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RAKEHGALFMVVFYRAGIKSMEK*SSAKPV Trigger: GACTGGCTTCGCAGAAGACAATTTTTCCATGGACTT...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATTAAGTAAACAGAATTaGGGCCCCAGATTATCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GLCICAQQGVRQAYEKGLLSKQN*GPRLSD Trigger: ATCTGATAATCTGGGGCCCAAATTCTGTTTACTTAA...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGAATCTGGGGCCACCTaGGCCAAGGCAGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELSLWWSFTGLAFSCYALESGAT*AKAGRG Trigger: GCCCCTGCCTGCCTTGGCTCAGGTGGCCCCAGATTC...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGGCAGGCAGGGGCTCTTaGTTTCCTCCAAGTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGAGRGS*FPPSPW Trigger: CCATGGACTTGGAGGAAATCAAGAGCCCCTGCCTGC...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGAGAACGACAGAGTGCTaGAGAGGAGCCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGRTTEC*RGAWAQ Trigger: CTGTGCCCAGGCTCCTCTCCAGCACTCTGTCGTTCT...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGTTAGGATATCTGGGGTaGGACGGGAGGAAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGLGYLG*DGRKVR Trigger: CCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAA...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAGGGACGGGAGGAAGGTaGGGGGATACAACTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKCIRVVASERKASGHREGTGGR*GDTTAV Trigger: GACAGCAGTTGTATCCCCTCACCTTCCTCCCGTCCC...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTAGACGTGGTTGGGGCTaGAGACACCACCAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSCYALVPQICCSWWTPIRRGWG*RHHQAD Trigger: ATCAGCCTGGTGGTGTCTCCAGCCCCAACCACGTCT...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGATACAACTGCTGTCTTaGTCAGCTGCCCCTGACACA | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGIQLLS*SAAPDT Trigger: TGTGTCAGGGGCAGCTGAGCAAGACAGCAGTTGTAT...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTGAGGGGATACAACTaGTGTCTTGCTCAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELSLWWSFTGLAFSCYALVRGYN*CLAQLP Trigger: GGGCAGCTGAGCAAGACAGCAGTTGTATCCCCTCAC...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACAGACGTGGTTGGGGCTaGAGACACCACCAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYRRGWG*RHHQAD Trigger: ATCAGCCTGGTGGTGTCTCCAGCCCCAACCACGTCT...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACCATAGGAGACGTGGTTaGGGCTGGAGACACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYHRRRG*GWRHHQ Trigger: CTGGTGGTGTCTCCAGCCCCAACCACGTCTCCTATG...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAGTCACTGCTGTCCTGTaGCACCTGCAGATCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKCIRVVASERKASGHREVTAVL*HLQIRS Trigger: GCTCCTGATCTGCAGGTGCCACAGGACAGCAGTGAC...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGATCTGTTGCTCATGGTaGACCCCCATTCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGICCSW*TPILSG Trigger: ACCACTCAGAATGGGGGTCCACCATGAGCAACAGAT...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTGAATCTGGGGCCACCTaGGCCAAGGCAGGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIIYLAPCSITQLRLFLPESGAT*AKAGRG Trigger: GCCCCTGCCTGCCTTGGCTCAGGTGGCCCCAGATTC...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACCAGAAACCTCGTCACTaGTGTCCTGTGGCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYQKPRH*CPVAPA Trigger: TGCAGGTGCCACAGGACAGCAGTGACGAGGTTTCTG...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGAAGCCAGTCTCTGGTaGCATAAAGGTTGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ELSLWWSFTGLAFSCYALEASLW*HKGWGL Trigger: CAGTCCCCAACCTTTATGGCACCAGAGACTGGCTTC...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCAGCAGCACAGGTaGAAGCAGCAGGTGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGIQQQHR*KQQVWT Trigger: GGTCCACACCTGCTGCTTCCACCTGTGCTGCTGCTG...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341495.7 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGCCAGAGGTCCCCTCTaGAGAAGTGATCAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELSLWWSFTGLAFSCYALARGPL*RSDQNC Trigger: ACAGTTCTGATCACTTCTCCAGAGGGGACCTCTGGC...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACTTCTGGGTCCTGTTTTaGGCCACTGAGTCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYFWVLF*ATESPA Trigger: AGCAGGCGACTCAGTGGCCCAAAACAGGACCCAGAA...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTTGCGAAGCCAGTCTCTaGTGCCATAAAGGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCYALVPQICCSWWTPICEASL*CHKGWG Trigger: TCCCCAACCTTTATGGCACCAGAGACTGGCTTCGCA...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAGGGCTGGCATTCAGCTaGTATGCACTGGTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKCIRVVASERKASGHREGLAFS*YALVPQ Trigger: TTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCC...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTAGAACGACAGAGTGCTaGAGAGGAGCCTGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGIRTTEC*RGAWAQ Trigger: CTGTGCCCAGGCTCCTCTCCAGCACTCTGTCGTTCT...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGATGGAGCTCTCTTTATaGTGGTCTTTTACAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGMELSL*WSFTGL Trigger: CAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCAT...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGCAATGGAATAAGCACTaGAAAGAAGTGGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VISLSFRISGVGREEGEGQWNKH*KEVGCV Trigger: TACACAGCCCACTTCTTTTCAGTGCTTATTCCATTG...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTTGGGCTGTGTATATGTaGCCAGCAAGGAGTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSCYALVPQICCSWWTPIWAVYM*PARSKT Trigger: TGTCTTACTCCTTGCTGGGCACATATACACAGCCCA...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTCCATTGATGGAGGGATaGCCAGAGGTCCCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFWATESPAHVILTHLIFPLMEG*PEVPSG Trigger: TCCAGAGGGGACCTCTGGCCATCCCTCCATCAATGG...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| 3UTR CAA 72 bp | CAGGGGCTCTTGATTTCCTCCAAGTCCATGGAAAAATaGTCTTCTGCGAAGCCAGTCTCTGGTGCCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLLISSKSMEK*SSAKPVSGAIK Trigger: CTTTATGGCACCAGAGACTGGCTTCGCAGAAGACAATTTTTCCATGGACTTGGAGGAAATCAAGAGCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAAGCAGGCAGGGGCTCTTaGTTTCCTGGTCTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQAGRGS*FPGLRA Trigger: GGCTCTGAGACCAGGAAATCAAGAGCCCCTGCCTGC...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000341495.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTGGGCTGGCATTCAGCTaGTATGCACTGGTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGIGLAFS*YALVPQ Trigger: TTGAGGTACCAGTGCATAGCAGCTGAATGCCAGCCC...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACGGAAAAATTGTCTTCTaGGAAGCCAGTCTCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYGKIVF*EASLWC Trigger: GCACCAGAGACTGGCTTCGCAGAAGACAATTTTTCC...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTTGGAAGCAGCAGGTGTaGACCCCACCCCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: IIIYLAPCSITQLRLFLPWKQQV*TPPQAI Trigger: AATGGCCTGGGGTGGGGTCCACACCTGCTGCTTCCA...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000341495.7 |
||
| CDS-3UTR CCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTTTCTGGGTCCTGTTTTaGGCCACTGAGTCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFWATESPAHVILTHLIFFWVLF*ATESPA Trigger: AGCAGGCGACTCAGTGGCCCAAAACAGGACCCAGAA...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 48% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTTCATTCTGTGTCAGCTaGATCATGGTGATGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSCYALVPQICCSWWTPISFCVS*IMVMLK Trigger: CTTCAACATCACCATGATTCAGCTGACACAGAATGA...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341495.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTTCCCCTCTGGAGAAGTaGTCAGAACTGTGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGISPLEK*SELCLL Trigger: CAACAAGCACAGTTCTGATCACTTCTCCAGAGGGGA...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACCAGCTTCCAGTCTGCTaGTTACAGCCTTTCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYQLPVC*LQPFLV Trigger: AACTAAGAAAGGCTGTAATCAGCAGACTGGAAGCTG...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTTTCCTCACAAGGAGGTaGGGAGCAATACTTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGIFLTRR*GAILRP Trigger: TGGCCTAAGTATTGCTCCCCACCTCCTTGTGAGGAA...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAAGCCCAGATCTGTTTCTaGCAGCGGAGGAGAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQAQICF*QRRRGE Trigger: TTCTCCTCTCCTCCGCTGTCAGAAACAGATCTGGGC...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000341495.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTTCATGTGGCAGGAGCTaGGATATACACGAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGISCGRS*DIHEET Trigger: AGTCTCTTCGTGTATATCTCAGCTCCTGCCACATGA...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAAACAAAGCAAAAGCGATaGCTCTCACAGATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKCIRVVASERKASGHRETKQKR*LSQIGD Trigger: ATCACCTATCTGTGAGAGGCATCGCTTTTGCTTTGT...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATGGGCTGTGTATATGTaGCCAGCAAGGAGTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GLCICAQQGVRQAYEKGLWAVYM*PARSKT Trigger: TGTCTTACTCCTTGCTGGGCACATATACACAGCCCA...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTACCATTGATGGAGGGATaGCCAGAGGTCCCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLPLMEG*PEVPSG Trigger: TCCAGAGGGGACCTCTGGCCATCCCTCCATCAATGG...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR CCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTAGAGCTCTCTTTATGGTaGTCTTTTACAGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCICAQQGVRQAYEKGLELSLW*SFTGLA Trigger: TGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
||
| CDS-3UTR GCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTACAGAAACCTCGTCACTaGTGTCCTGTGGCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLQKPRH*CPVAPA Trigger: TGCAGGTGCCACAGGACAGCAGTGACGAGGTTTCTG...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAAGCCAGAGGTCCCCTCTaGAGAAGTGATCAGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQARGPL*RSDQNC Trigger: ACAGTTCTGATCACTTCTCCAGAGGGGACCTCTGGC...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CCA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTGAGCTCTCTTTATGGTaGTCTTTTACAGGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFWATESPAHVILTHLIFELSLW*SFTGLA Trigger: TGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTAGCACTGAAAAGAAGTaGGCTGTGTATATGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGISTEKK*AVYMCP Trigger: TGGGCACATATACACAGCCCACTTCTTTTCAGTGCT...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTTCCCCTCTGGAGAAGTaGTCAGAACTGTGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IIIYLAPCSITQLRLFLPSPLEK*SELCLL Trigger: CAACAAGCACAGTTCTGATCACTTCTCCAGAGGGGA...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | AGAGCAAAAGAACATGGAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTGATTCCATTTACGGATaGATGTTCTGGGTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RAKEHGALFMVVFYRAGIDSIYG*MFWVLF Trigger: AAACAGGACCCAGAACATTCATCCGTAAATGGAATC...AATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTCCATGTTCTTTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTAGATTCCATTTACGGATaGATGTTCTGGGTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLCICAQQGVRQAYEKGLDSIYG*MFWVLF Trigger: AAACAGGACCCAGAACATTCATCCGTAAATGGAATC...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | TCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGGTACTTCTCTTTTAGGCTGTaGATCTTCTCACATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYGGLLQGWHSAAMHWYFSFRL*IFSHVK Trigger: CTTAACATGTGAGAAGATTCACAGCCTAAAAGAGAA...GTACCAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTATCTGTTGCTCATGGTaGACCCCCATTCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IIIYLAPCSITQLRLFLPICCSW*TPILSG Trigger: ACCACTCAGAATGGGGGTCCACCATGAGCAACAGAT...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATCATGTGGCAGGAGCTaGGATATACACGAAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQSCGRS*DIHEET Trigger: AGTCTCTTCGTGTATATCTCAGCTCCTGCCACATGA...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTTTCCACAAGAGAACGTaGAGGAGGGTATTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: IIIYLAPCSITQLRLFLPFHKRT*RRVFIT Trigger: TGTGATGAATACCCTCCTTCACGTTCTCTTGTGGAA...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTCCACAAGAGAACGTaGAGGAGGGTATTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQFHKRT*RRVFIT Trigger: TGTGATGAATACCCTCCTTCACGTTCTCTTGTGGAA...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR GCA 90 bp | GGGCTGTGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTAAAGTTACATACCAAATaGATTAGAGTAGTTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLCICAQQGVRQAYEKGLKLHTK*IRVVAS Trigger: CGAGGCAACTACTCTAATGCATTTGGTATGTAACTT...TAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACACAGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAACAATGGAATAAGCACTaGAAAGAAGTGGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQQWNKH*KEVGCV Trigger: TACACAGCCCACTTCTTTTCAGTGCTTATTCCATTG...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAAGCACTGAAAAGAAGTaGGCTGTGTATATGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLSTEKK*AVYMCP Trigger: TGGGCACATATACACAGCCCACTTCTTTTCAGTGCT...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR GCA 90 bp | GCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTTCTTTTAACAAAGCAAAAGCGATaGCTCTCACAGATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AQQGVRQAYEKGLSQFLLTKQKR*LSQIGD Trigger: ATCACCTATCTGTGAGAGGCATCGCTTTTGCTTTGT...TAAAAGAAATTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR TCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAATTCTCTTTTAGGCTGTaGATCTTCTCACATGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQFSFRL*IFSHVK Trigger: CTTAACATGTGAGAAGATTCACAGCCTAAAAGAGAA...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR GCA 90 bp | TGTATATGTGCCCAGCAAGGAGTAAGACAAGCATATGAAAAAGGTCTATCACAAAAGTTACATACCAAATaGATTAGAGTAGTTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: CICAQQGVRQAYEKGLSQKLHTK*IRVVAS Trigger: CGAGGCAACTACTCTAATGCATTTGGTATGTAACTT...TTGTGATAGACCTTTTTCATATGCTTGTCTTACTCCTTGCTGGGCACATATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGCTGGTCTCAGAGCCATaGATGGAGGGATGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELSLWWSFTGLAFSCYALLVSEP*MEGWPE Trigger: CTCTGGCCATCCCTCCATCAATGGCTCTGAGACCAG...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTGGCAGGCAGGGGCTCTaGATTTCCTCCAAGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FSCYALVPQICCSWWTPIGRQGL*ISSKSM Trigger: CATGGACTTGGAGGAAATCAAGAGCCCCTGCCTGCC...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | GTCATTTCTCTCTCATTTAGGATATCTGGGGTGGGACGGGAGGAAGGTGAGGGGAAGTCCATGGAAAAATaGTCTTCTGCGAAGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VISLSFRISGVGREEGEGKSMEK*SSAKPV Trigger: GACTGGCTTCGCAGAAGACAATTTTTCCATGGACTT...CCCCTCACCTTCCTCCCGTCCCACCCCAGATATCCTAAATGAGAGAGAAATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | ATAATCATATATCTAGCCCCATGTAGCATCACTCAGCTACGTTTATTCTTGCCTCTGGTCTCAGAGCCATaGATGGAGGGATGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IIIYLAPCSITQLRLFLPLVSEP*MEGWPE Trigger: CTCTGGCCATCCCTCCATCAATGGCTCTGAGACCAG...AGGCAAGAATAAACGTAGCTGAGTGATGCTACATGGGGCTAGATATATGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | TTCAGCTGCTATGCACTGGTACCTCAAATCTGTTGCTCATGGTGGACCCCCATTATACCATTCCATAGGTaGTGCTGTGTACTTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: FSCYALVPQICCSWWTPIIPFHR*CCVLHI Trigger: TATGTGAAGTACACAGCACAACCTATGGAATGGTAT...AATGGGGGTCCACCATGAGCAACAGATTTGAGGTACCAGTGCATAGCAGCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | GAGCTCTCTTTATGGTGGTCTTTTACAGGGCTGGCATTCAGCTGCTATGCACTGTTAAGTAAACAGAATTaGGGCCCCAGATTATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ELSLWWSFTGLAFSCYALLSKQN*GPRLSD Trigger: ATCTGATAATCTGGGGCCCAAATTCTGTTTACTTAA...CAGTGCATAGCAGCTGAATGCCAGCCCTGTAAAAGACCACCATAAAGAGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | ACCAAATGCATTAGAGTAGTTGCCTCGGAGAGGAAGGCAAGTGGACATAGGGAATTAAGTAAACAGAATTaGGGCCCCAGATTATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKCIRVVASERKASGHRELSKQN*GPRLSD Trigger: ATCTGATAATCTGGGGCCCAAATTCTGTTTACTTAA...TTCCCTATGTCCACTTGCCTTCCTCTCCGAGGCAACTACTCTAATGCATTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000461240.1 |
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| CDS-3UTR CAA 90 bp | CTGTTTTGGGCCACTGAGTCGCCTGCTCATGTCATTTTAACGCATCTAATTTTTCTCTTGTTCTTCATTTaGCTCTTAGCTGCCATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LFWATESPAHVILTHLIFLLFFI*LLAAIP Trigger: AGGAATGGCAGCTAAGAGCAAAATGAAGAACAAGAG...AAAAATTAGATGCGTTAAAATGACATGAGCAGGCGACTCAGTGGCCCAAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| CDS TCA 72 bp | TTTGCTCTTAGCTGCCATTCCTGGTCTCAGAGCCATTaGTGGAGGGATGGCCAGAGGTCCCCTCTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FALSCHSWSQSH*WRDGQRSPLEK Trigger: CTTCTCCAGAGGGGACCTCTGGCCATCCCTCCATCAATGGCTCTGAGACCAGGAATGGCAGCTAAGAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| CDS CCA 72 bp | CTGCCATTCCTGGTCTCAGAGCCATTGATGGAGGGATaGCCAGAGGTCCCCTCTGGAGAAGTGATCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: LPFLVSEPLMEG*PEVPSGEVIRT Trigger: AGTTCTGATCACTTCTCCAGAGGGGACCTCTGGCCATCCCTCCATCAATGGCTCTGAGACCAGGAATGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461240.1 |
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| CDS CCA 72 bp | CTTGATTTCCTGGTCTCAGAGCCATTGATGGAGGGATaGCCAGAGGTCCCCTCTGGAGAAGTGATCAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: LDFLVSEPLMEG*PEVPSGEVIRT Trigger: AGTTCTGATCACTTCTCCAGAGGGGACCTCTGGCCATCCCTCCATCAATGGCTCTGAGACCAGGAAATCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341495.7 ENST00000448827.6 |
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