Pregenerated sensors for TREML1 (Homo sapiens)
Ensembl gene IDs: ENSG00000161911Ensembl transcript IDs: ENST00000373127.8, ENST00000426005.6, ENST00000437044.2, ENST00000590581.1
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTaGCCCACACGAGGTCCCTCCACCCTTGTTCCCTCCCGGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SSLAGWSLIVRWILG*PTRGPSTLVPSRED Trigger: ATCTTCCCGGGAGGGAACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR GCA 90 bp | TTTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTaGAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGCGTC | + |
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Preference number: 1 (lower is better) Translates to: FSPVCNGRRTSGGVG*REVFPKTSQSCLSV Trigger: GACGCTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR TCA 90 bp | GAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTaGGCGTCACTTTCCCTAGTAAAGTTAGGACATTGGATTAGATCT | + |
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Preference number: 1 (lower is better) Translates to: ELGAGRSSPRHLSHV*ASLSLVKLGHWIRS Trigger: AGATCTAATCCAATGTCCTAACTTTACTAGGGAAAGTGACGCTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGAGGTGGATTCTGGGCTaGCCCACACGAGGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: WGSWVQGGLPQDISVMSERWILG*PTRGPS Trigger: GGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCT...CTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CAA 90 bp | TTGTTAGGTGGATTCTGGGCTGGCCCACACGAGGTCCCTCCACCCTaGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLGGFWAGPHEVPPP*FPPGKITVAYVTGL Trigger: CAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CAA 90 bp | CCCTTGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTaGGAGCAGACCAGGACCTTAGGAGGTAGAGGGGGCAATGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: PLFPPGKITVAYVTG*EQTRTLGGRGGNED Trigger: ATCCTCATTGCCCCCTCTACCTCCTAAGGTCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGGTCAAGCCTAATGTGTaGTACATCCAAAGGCAATTC | + |
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Preference number: 2 (lower is better) Translates to: WGSWVQGGLPQDISVMSEVKPNV*YIQRQF Trigger: GAATTGCCTTTGGATGTACCACACATTAGGCTTGAC...CTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCGTAGGCTGGTGTAGGTaGTATTGTCAAATGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PVCNGRRTSGGVGCREVFVGWCR*YCQMKV Trigger: CACCTTCATTTGACAATACCACCTACACCAGCCTAC...GAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CCA 72 bp | GCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTaGCCCACACGAGGTCCCTCCACCCTTGTTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: AGWSLIVRWILG*PTRGPSTLVPS Trigger: GGAGGGAACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGGAGGTCCCTCCACCCTaGTTCCCTCCCGGGAAGATT | + |
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Preference number: 3 (lower is better) Translates to: LAQCVMVEEPVGELGAGREVPPP*FPPGKI Trigger: AATCTTCCCGGGAGGGAACAAGGGTGGAGGGACCTC...CCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CCA 72 bp | ATGAGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTaGATTCTGGGCTGGCCCACACGAGGTCCCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: MSSLAGWSLIVR*ILGWPTRGPST Trigger: GGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGAGGAGCTTCCCACGGGTaGCTGCAGCACCTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLPGRLLWHMSQAWSRPGGASHG*LQHLRE Trigger: CTCCCTGAGGTGCTGCAGGCACCCGTGGGAAGCTCC...TCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CAA 72 bp | GGATTCTGGGCTGGCCCACACGAGGTCCCTCCACCCTaGTTCCCTCCCGGGAAGATTACTGTGGCATATGTC | + |
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Preference number: 4 (lower is better) Translates to: GFWAGPHEVPPP*FPPGKITVAYV Trigger: GACATATGCCACAGTAATCTTCCCGGGAGGGAACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | TCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGATCTGCGATCCACAGCTaGGGACACCAGGGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SLPGRLLWHMSQAWSRPGSAIHS*GHQGLA Trigger: TGCCAGCCCCTGGTGTCCTCAGCTGTGGATCGCAGA...TCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | TGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGCCGGTCCAGAGTCACTaGCGTGGTGGACCACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CNGRRTSGGVGCREVFPKPVQSH*RGGPLR Trigger: CCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGG...CTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | AAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGACCCCACCCAGGTCTGTaGGAAACGTACGCCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: KVPGCSDILRILGHELAGPHPGL*ETYACP Trigger: CGGGCAGGCGTACGTTTCTCACAGACCTGGGTGGGG...TCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | TCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGATGCCCGCTGGAGCTCTaGGATCCACAGCTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SLPGRLLWHMSQAWSRPGCPLEL*DPQLRT Trigger: TGTCCTCAGCTGTGGATCGCAGAGCTCCAGCGGGCA...TCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | GTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAACAGCACCACCGCTaGCACCAGCAGACCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: VCNGRRTSGGVGCREVFPKQHHR*HQQTYQ Trigger: CTGGTAGGTCTGCTGGTGGCAGCGGTGGTGCTGTTT...GGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | CTGATTGTTAGGTGGATTCTGGGCTGGCCCACACGAGGTCCCTCCACCCTTGTTCCAGAGTCACTGACGTaGTGGACCACTGAGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LIVRWILGWPTRGPSTLVPESLT*WTTEEG Trigger: TCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGG...AACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | TGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGAACCAGTGGGGGAGTTaGGTGCAGGGAGGTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: CNGRRTSGGVGCREVFPKNQWGS*VQGGLP Trigger: GGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTT...CTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | GCATATGTCACAGGCTTGGAGCAGACCAGGACCTTAGGAGGTAGAGGGGGCAATACTGCCTGCAGGGTCTaGGAATGCGTTCTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AYVTGLEQTRTLGGRGGNTACRV*ECVLSQ Trigger: CTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGT...ATTGCCCCCTCTACCTCCTAAGGTCCTGGTCTGCTCCAAGCCTGTGACATATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | CTTGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACGGCACTGCACCAGAATaGAGCTTCCCACGGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVPSREDYCGICHRLGADGTAPE*SFPRVP Trigger: AGGCACCCGTGGGAAGCTCCATTCTGGTGCAGTGCC...GTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | GGAGTGAAGGTTTTCCTGATGGGGAATCAAGAGGTAGGCTGGTGTAGGTGGTATGAGGACACCAGGGGCTaGCACCCCTCCGGCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: GVKVFLMGNQEVGWCRWYEDTRG*HPSGKN Trigger: GTTCTTGCCGGAGGGGTGCCAGCCCCTGGTGTCCTC...ATACCACCTACACCAGCCTACCTCTTGATTCCCCATCAGGAAAACCTTCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | GTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCTTGTTAGGTGGATTCTaGGCTGGCCCACACGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: VCNGRRTSGGVGCREVFPLLGGF*AGPHEV Trigger: GACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAA...GGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | TGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGCATGAGCTGGCTGGATaGATGCACAGAACCCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: WGSWVQGGLPQDISVMSEHELAG*MHRTPR Trigger: CCTAGGGGTTCTGTGCATCCATCCAGCCAGCTCATG...CTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | TTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGGACGTGGTGGACCACTaGGGAGGGATTCTTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LAQCVMVEEPVGELGAGRDVVDH*GGILVS Trigger: GGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTC...CCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | TGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGGGAGGCTGCCAACTATaGCCTGACCTTCTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CNGRRTSGGVGCREVFPKGGCQL*PDLLVP Trigger: TGGGACTAGAAGGTCAGGGCATAGTTGGCAGCCTCC...CTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | AGGGTTTATTTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTCTTCCCACGGGTGCCTaGAGCACCTCAGGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RVYLAQCVMVEEPVGELGLPTGA*STSGRL Trigger: CAGCCTCCCTGAGGTGCTGCAGGCACCCGTGGGAAG...ACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAAATAAACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | CTTGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACTGGCCCCATCCACCATaGAGCCATACTCGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LVPSREDYCGICHRLGADWPHPP*SHTRQH Trigger: ATGCTGGCGAGTATGGCTGCATGGTGGATGGGGCCA...GTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | AGGGTTTATTTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTCGTACGCCTGCCCGCTaGAGCTCTGCGATCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: RVYLAQCVMVEEPVGELGRTPAR*SSAIHS Trigger: GCTGTGGATCGCAGAGCTCCAGCGGGCAGGCGTACG...ACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAAATAAACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | CCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGACCTTATGGGTTCCAAAGGGTTaGCACTGCCTGCAGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PGKITVAYVTGLEQTRTLWVPKG*HCLQGL Trigger: CAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCA...TAAGGTCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| 3UTR CAA 72 bp | GCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTaGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: AQCVMVEEPVGE*GAGRSSPRHLS Trigger: ACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | CTTGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACAAGGATCCTAGGGCATaGGCTGGCTGGATGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: LVPSREDYCGICHRLGADKDPRA*AGWMDA Trigger: TGCATCCATCCAGCCAGCTCATGCCCTAGGATCCTT...GTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | GGAGTGAAGGTTTTCCTGATGGGGAATCAAGAGGTAGGCTGGTGTAGGTGGTATGTAACCATTTCCACCTaGAGCAGGCCCCCACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GVKVFLMGNQEVGWCRWYVTIST*SRPPPR Trigger: CCTGGGTGGGGGCCTGCTGCAGGTGGAAATGGTTAC...ATACCACCTACACCAGCCTACCTCTTGATTCCCCATCAGGAAAACCTTCACTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | GGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGATGGATGCACCCAAAGGGTTGGCACTaGCTGCAGGGTCTGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: GCSDILRILGHELAGWMHPKGWH*LQGLRM Trigger: CATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGG...GTGCATCCATCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | CTGATTGTTAGGTGGATTCTGGGCTGGCCCACACGAGGTCCCTCCACCCTTGTTAGAAATGTCAACTCCTaGGCTTGCCTGGGCACTGAT | + |
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Preference number: 4 (lower is better) Translates to: LIVRWILGWPTRGPSTLVRNVNS*ACLGTD Trigger: ATCAGTGCCCAGGCAAGCCCAGGAGTTGACATTTCT...AACAAGGGTGGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCTAACAATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | CTTGTTCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACGGTGAGGCCCATGGCTaGGCAGAGAAATGTCAACTC | + |
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Preference number: 4 (lower is better) Translates to: LVPSREDYCGICHRLGADGEAHG*AEKCQL Trigger: GAGTTGACATTTCTCTGCCCAGCCATGGGCCTCACC...GTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGAACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | CCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGACCGTTCTCAGCCAGACTaGCAATCTTATGGGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSREDYCGICHRLGADQDRSQPD*QSYGSL Trigger: AAGAGACCCATAAGATTGGCAGTCTGGCTGAGAACG...GTCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | AAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGAAGCTGGCTGGATGGATaGACAGAACCCCTAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: KVPGCSDILRILGHELAGSWLDG*TEPLGM Trigger: CATCCCTAGGGGTTCTGTGCATCCATCCAGCCAGCT...TCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | GTGATGAGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTGGGAGTCACTGACGTGGTaGACCACTGAGGAGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: VMSSLAGWSLIVRWILGWESLTW*TTEEGF Trigger: GAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTC...CCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCTCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | TGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGCCGGGAAGATTACTGTaGCATATGTCACAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: CNGRRTSGGVGCREVFPKPGRLL*HMSQAW Trigger: CCAAGCCTGTGACATATGCCACAGTAATCTTCCCGG...CTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR TCA 90 bp | AGGGTTTATTTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTCGGCACCACACCTTCTaGGCTTTGACATCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RVYLAQCVMVEEPVGELGRHHTF*ALTSWS Trigger: GCTCCAGGATGTCAAAGCTCAGAAGGTGTGGTGCCG...ACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAAATAAACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | GATCTTAAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCACCTCAGGGAGGCTaGCAACTATGCCCTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: DLKVPGCSDILRILGHELAPQGG*QLCPDL Trigger: AAGGTCAGGGCATAGTTGGCAGCCTCCCTGAGGTGC...CAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTTAAGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | GTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACTCTTCTTCTTCCTCTaGGGGCAGTATGTTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VMVEEPVGELGAGRSSPRLFFFL*GQYVQR Trigger: TCTCTGAACATACTGCCCCCAGAGGAAGAAGAAGAG...TCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTCTTCTACCATTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | AAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGATCTTCTCATCCTGGCTaGGTTCCAAAGGGTTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KVPGCSDILRILGHELAGSSHPG*VPKGWH Trigger: GTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGA...TCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | GTATTGTCAAATGAAGGTGGTGAGTCAAGCCTAATGTGTGGTACATCCAAAGGCAGGTGGATTCTGGGCTaGCCCACACGAGGTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLSNEGGESSLMCGTSKGRWILG*PTRGPS Trigger: GGAGGGACCTCGTGTGGGCCAGCCCAGAATCCACCT...GCCTTTGGATGTACCACACATTAGGCTTGACTCACCACCTTCATTTGACAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR GCA 90 bp | TGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGCTTAAAGTCCCTGGTTaGTCAGATATCCTAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: WGSWVQGGLPQDISVMSELKVPG*SDILRI Trigger: GATCCTTAGGATATCTGAGCAACCAGGGACTTTAAG...CTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CCA 90 bp | TGGGGGAGTTGGGTGCAGGGAGGTCTTCCCCAAGACATCTCAGTCATGTCTGAGAATCAAGAGGTAGGCTaGTGTAGGTGGTATTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGSWVQGGLPQDISVMSENQEVG*CRWYCQ Trigger: TTGACAATACCACCTACACCAGCCTACCTCTTGATT...CTCAGACATGACTGAGATGTCTTGGGGAAGACCTCCCTGCACCCAACTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGAGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTGGAGTCTGATTGTTAGGTaGATTCTGGGCTGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VMSSLAGWSLIVRWILGWSLIVR*ILGWPT Trigger: TGTGGGCCAGCCCAGAATCCACCTAACAATCAGACT...CCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCTCATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCCGGGAAGATTACTGTGGCATATGTCACAGGCTTGGAGCAGACCAGGAAGACTGCCAATCTTATaGGTCTCTTCTTCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPGRLLWHMSQAWSRPGRLPIL*VSSSSS Trigger: AGAGGAAGAAGAAGAGACCCATAAGATTGGCAGTCT...TCCTGGTCTGCTCCAAGCCTGTGACATATGCCACAGTAATCTTCCCGGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGAAGCAGCTTAGCTGGATaGAGTCTGATTGTTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVPGCSDILRILGHELAGSSLAG*SLIVRW Trigger: CCACCTAACAATCAGACTCCATCCAGCTAAGCTGCT...TCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTCCTGATGGGGAATCAAGAGGTAGGCTGGTGTAGGTGGTATTGTCAAATGCCAGCATCCTCTTCCTaGAGGGTAACCATTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VFLMGNQEVGWCRWYCQMPASSS*RVTIST Trigger: GGTGGAAATGGTTACCCTGCAGGAAGAGGATGCTGG...CATTTGACAATACCACCTACACCAGCCTACCTCTTGATTCCCCATCAGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGAGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTGGATTCTTGTTTCCTCTTaGCCATCACAGCAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VMSSLAGWSLIVRWILGWILVSS*PSQQTA Trigger: TGCTGTTTGCTGTGATGGCCAAGAGGAAACAAGAAT...CCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCTCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTGAAGGTTTTCCTGATGGGGAATCAAGAGGTAGGCTGGTGTAGGTGGTATGTAGGCTGGTGTAGGTaGTATTGTCAAATGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVKVFLMGNQEVGWCRWYVGWCR*YCQMKV Trigger: CACCTTCATTTGACAATACCACCTACACCAGCCTAC...ATACCACCTACACCAGCCTACCTCTTGATTCCCCATCAGGAAAACCTTCACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR TCA 90 bp | AATCAAGAGGTAGGCTGGTGTAGGTGGTATTGTCAAATGAAGGTGGTGAGTCAAACACCTTCTGAGCTTTaGCATCCTGGAGCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQEVGWCRWYCQMKVVSQTPSEL*HPGACS Trigger: ACTACAGGCTCCAGGATGTCAAAGCTCAGAAGGTGT...TTGACTCACCACCTTCATTTGACAATACCACCTACACCAGCCTACCTCTTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTCCTGATGGGGAATCAAGAGGTAGGCTGGTGTAGGTGGTATTGTCAAATGGTCAAGCCTAATGTGTaGTACATCCAAAGGCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VFLMGNQEVGWCRWYCQMVKPNV*YIQRQF Trigger: GAATTGCCTTTGGATGTACCACACATTAGGCTTGAC...CATTTGACAATACCACCTACACCAGCCTACCTCTTGATTCCCCATCAGGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS TCA 90 bp | TGTGAGAAACGTACGCCTGCCCGCTGGAGCTCTGCGATCCACAGCTaGGGACACCAGGGGCTGGCACCCCTCCGGCAAGAACCGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CEKRTPARWSSAIHS*GHQGLAPLRQEPAP Trigger: TGGTGCCGGTTCTTGCCGGAGGGGTGCCAGCCCCTGGTGTCCTCAGCTGTGGATCGCAGAGCTCCAGCGGGCAGGCGTACGTTTCTCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS GCA 90 bp | CTGGAGCCTGTAGTGGCACTGCACCAGAATGGAGCTTCCCACGGGTaGCTGCAGCACCTCAGGGAGGCTGCCAACTATGCCCTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEPVVALHQNGASHG*LQHLREAANYALTF Trigger: GAAGGTCAGGGCATAGTTGGCAGCCTCCCTGAGGTGCTGCAGGCACCCGTGGGAAGCTCCATTCTGGTGCAGTGCCACTACAGGCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS GCA 90 bp | CCATACTCGCCAGCATCCTCTTCCTGCAGGGTAACCATTTCCACCTaGAGCAGGCCCCCACCCAGGTCTGTGAGAAACGTACGCCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PYSPASSSCRVTIST*SRPPPRSVRNVRLP Trigger: GGGCAGGCGTACGTTTCTCACAGACCTGGGTGGGGGCCTGCTGCAGGTGGAAATGGTTACCCTGCAGGAAGAGGATGCTGGCGAGTATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS TCA 90 bp | GCTGGCACCCCTCCGGCAAGAACCGGCACCACACCTTCTGAGCTTTaGCATCCTGGAGCCTGTAGTGGCACTGCACCAGAATGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGTPPARTGTTPSEL*HPGACSGTAPEWSF Trigger: GAAGCTCCATTCTGGTGCAGTGCCACTACAGGCTCCAGGATGTCAAAGCTCAGAAGGTGTGGTGCCGGTTCTTGCCGGAGGGGTGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS GCA 90 bp | GTTCCCTTGTTTCCTCTTGGCCATCACAGCAAACAGCACCACCGCTaGCACCAGCAGACCTACCAGGAGCACAGCACCCCAGATCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLFPLGHHSKQHHR*HQQTYQEHSTPDQG Trigger: CCCTTGATCTGGGGTGCTGTGCTCCTGGTAGGTCTGCTGGTGGCAGCGGTGGTGCTGTTTGCTGTGATGGCCAAGAGGAAACAAGGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS GCA 90 bp | GGATTCTTGTTTCCTCTTGGCCATCACAGCAAACAGCACCACCGCTaGCACCAGCAGACCTACCAGGAGCACAGCACCCCAGATCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GFLFPLGHHSKQHHR*HQQTYQEHSTPDQG Trigger: CCCTTGATCTGGGGTGCTGTGCTCCTGGTAGGTCTGCTGGTGGCAGCGGTGGTGCTGTTTGCTGTGATGGCCAAGAGGAAACAAGAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS GCA 90 bp | AGGGGATGCTCTTCTCATCCTGGCTGGGTTCCAAAGGGTTGGCACTaGCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGACTGCCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RGCSSHPGWVPKGWH*LQGLRMRSQPDCQS Trigger: AGATTGGCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGAGCATCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CCA 90 bp | AGATCAAGGGGATGCTCTTCTCATCCTGGCTGGGTTCCAAAGGGTTaGCACTGCCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRGCSSHPGWVPKG*HCLQGLRMRSQPDC Trigger: GCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGAGCATCCCCTTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS-3UTR CAA 90 bp | AAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCTGGAGAACCAGTGGGGGAGTaGGGTGCAGGGAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVPGCSDILRILGHELAGEPVGE*GAGRSS Trigger: GGAAGACCTCCCTGCACCCAACTCCCCCACTGGTTC...TCCAGCCAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS TCA 90 bp | CTCATCCTGGCTGGGTTCCAAAGGGTTGGCACTGCCTGCAGGGTCTaGGAATGCGTTCTCAGCCAGACTGCCAATCTTATGGGTCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LILAGFQRVGTACRV*ECVLSQTANLMGLF Trigger: GAAGAGACCCATAAGATTGGCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
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| CDS CCA 90 bp | GGTACATCCAAAGGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTaGTGGACCACTGAGGAGGGATTCATGCCTGAAACTCTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GTSKGNSAAGPESLT*WTTEEGFMPETLLL Trigger: GAGCAGCAGAGTTTCAGGCATGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTTGGATGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS-3UTR CAA 90 bp | GTGATGAGCAGCTTAGCTGGATGGAGTCTGATTGTTAGGTGGATTCTGGGCTGGCTGGGTTCCAAAGGGTaGGCACTGCCTGCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VMSSLAGWSLIVRWILGWLGSKG*ALPAGS Trigger: AGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAG...CCAGCCCAGAATCCACCTAACAATCAGACTCCATCCAGCTAAGCTGCTCATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS TCA 90 bp | TGTGTGGTACATCCAAAGGCAATTCAGCAGCCGGTCCAGAGTCACTaGCGTGGTGGACCACTGAGGAGGGATTCTTGTTTCCTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CVVHPKAIQQPVQSH*RGGPLRRDSCFLLA Trigger: GGCCAAGAGGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTTGGATGTACCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS TCA 90 bp | TGTGTGGTACATCCAAAGGCAATTCAGCAGCCGGTCCAGAGTCACTaGCGTGGTGGACCACTGAGGAGGGATTCATGCCTGAAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVVHPKAIQQPVQSH*RGGPLRRDSCLKLC Trigger: GCAGAGTTTCAGGCATGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTTGGATGTACCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
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| CDS GCA 90 bp | GGTTGGCACTGCCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGACTaGCAATCTTATGGGTCTCTTCTTCTTCCTCTGGGGGCAGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: GWHCLQGLRMRSQPD*QSYGSLLLPLGAVC Trigger: ACATACTGCCCCCAGAGGAAGAAGAAGAGACCCATAAGATTGGCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
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| CDS CCA 90 bp | GGTACATCCAAAGGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTaGTGGACCACTGAGGAGGGATTCTTGTTTCCTCTTGGCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTSKGNSAAGPESLT*WTTEEGFLFPLGHH Trigger: GTGATGGCCAAGAGGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTTGGATGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS CCA 90 bp | CCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGACTGCCAATCTTATaGGTCTCTTCTTCTTCCTCTGTCAGGCCAGGAATGGAGTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PAGSENAFSARLPIL*VSSSSSVRPGMESE Trigger: TTCTGACTCCATTCCTGGCCTGACAGAGGAAGAAGAAGAGACCCATAAGATTGGCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590581.1 |
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| CDS-3UTR CAA 90 bp | GTATTGTCAAATGAAGGTGGTGAGTCAAGCCTAATGTGTGGTACATCCAAAGGCGAGGTCCCTCCACCCTaGTTCCCTCCCGGGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VLSNEGGESSLMCGTSKGEVPPP*FPPGKI Trigger: AATCTTCCCGGGAGGGAACAAGGGTGGAGGGACCTC...GCCTTTGGATGTACCACACATTAGGCTTGACTCACCACCTTCATTTGACAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS-3UTR CAA 90 bp | GATCTTAAAGTCCCTGGTTGCTCAGATATCCTAAGGATCCTAGGGCATGAGCTGGCATATGTCACAGGCTaGGAGCAGACCAGGACCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLKVPGCSDILRILGHELAYVTG*EQTRTL Trigger: TAAGGTCCTGGTCTGCTCCAAGCCTGTGACATATGC...CAGCTCATGCCCTAGGATCCTTAGGATATCTGAGCAACCAGGGACTTTAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS CCA 90 bp | CAGGAATGGAGTCAGAAGGAAACATTTAATGAGTGCATGCCCATATaGGCAGGCTTCAATATCCTGTTGAGGTCTGAGGGACTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEWSQKETFNECMPI*AGFNILLRSEGLEE Trigger: CTCCTCCAGTCCCTCAGACCTCAACAGGATATTGAAGCCTGCCCATATGGGCATGCACTCATTAAATGTTTCCTTCTGACTCCATTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590581.1 |
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| CDS-3UTR CAA 90 bp | AGGGTTTATTTAGCCCAGTGTGTAATGGTAGAAGAACCAGTGGGGGAGTTGGGTACTGAGGAGGGATTCTaGTTTCCTCTTGGCCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RVYLAQCVMVEEPVGELGTEEGF*FPLGHH Trigger: GTGATGGCCAAGAGGAAACAAGAATCCCTCCTCAGT...ACCCAACTCCCCCACTGGTTCTTCTACCATTACACACTGGGCTAAATAAACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS-3UTR CAA 90 bp | AATCAAGAGGTAGGCTGGTGTAGGTGGTATTGTCAAATGAAGGTGGTGAGTCAAGATTCTTGTTTCCTCTaGGCCATCACAGCAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NQEVGWCRWYCQMKVVSQDSCFL*AITANS Trigger: GCTGTTTGCTGTGATGGCCAAGAGGAAACAAGAATC...TTGACTCACCACCTTCATTTGACAATACCACCTACACCAGCCTACCTCTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS TCA 72 bp | CGTACGCCTGCCCGCTGGAGCTCTGCGATCCACAGCTaGGGACACCAGGGGCTGGCACCCCTCCGGCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTPARWSSAIHS*GHQGLAPLRQE Trigger: TTCTTGCCGGAGGGGTGCCAGCCCCTGGTGTCCTCAGCTGTGGATCGCAGAGCTCCAGCGGGCAGGCGTACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS CCA 72 bp | GGAGCTCTGCGATCCACAGCTGAGGACACCAGGGGCTaGCACCCCTCCGGCAAGAACCGGCACCACACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GALRSTAEDTRG*HPSGKNRHHTF Trigger: GAAGGTGTGGTGCCGGTTCTTGCCGGAGGGGTGCCAGCCCCTGGTGTCCTCAGCTGTGGATCGCAGAGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS TCA 72 bp | CCTCCGGCAAGAACCGGCACCACACCTTCTGAGCTTTaGCATCCTGGAGCCTGTAGTGGCACTGCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPARTGTTPSEL*HPGACSGTAPE Trigger: TTCTGGTGCAGTGCCACTACAGGCTCCAGGATGTCAAAGCTCAGAAGGTGTGGTGCCGGTTCTTGCCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS GCA 72 bp | CCAGCATCCTCTTCCTGCAGGGTAACCATTTCCACCTaGAGCAGGCCCCCACCCAGGTCTGTGAGAAACGTA | + |
|
Preference number: 6 (lower is better) Translates to: PASSSCRVTIST*SRPPPRSVRNV Trigger: TACGTTTCTCACAGACCTGGGTGGGGGCCTGCTGCAGGTGGAAATGGTTACCCTGCAGGAAGAGGATGCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373127.8 ENST00000426005.6 |
||
| CDS CAA 90 bp | CAGATCAAGGGGATGCTCTTCTCATCCTGGCTGGGTTCCAAAGGGTaGGCACTGCCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: QIKGMLFSSWLGSKG*ALPAGSENAFSARL Trigger: CAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGAGCATCCCCTTGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS TCA 72 bp | AGCAGCCGGTCCAGAGTCACTGACGTGGTGGACCACTaGGGAGGGATTCTTGTTTCCTCTTGGCCATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSRVTDVVDH*GGILVSSWPSQ Trigger: CTGTGATGGCCAAGAGGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS GCA 72 bp | TCTTCTCATCCTGGCTGGGTTCCAAAGGGTTGGCACTaGCTGCAGGGTCTGAGAATGCGTTCTCAGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSHPGWVPKGWH*LQGLRMRSQPD Trigger: GTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS GCA 72 bp | GGACCACTGAGGAGGGATTCATGCCTGAAACTCTGCTaGTCAGGAATCGGCCACAGACACCAAGCCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPLRRDSCLKLC*SGIGHRHQACS Trigger: GGAACAGGCTTGGTGTCTGTGGCCGATTCCTGAGCAGCAGAGTTTCAGGCATGAATCCCTCCTCAGTGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CCA 72 bp | GGATGCTCTTCTCATCCTGGCTGGGTTCCAAAGGGTTaGCACTGCCTGCAGGGTCTGAGAATGCGTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCSSHPGWVPKG*HCLQGLRMRSQ Trigger: CTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGAGCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CCA 72 bp | GGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTGGTaGACCACTGAGGAGGGATTCTTGTTTCCTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GNSAAGPESLTW*TTEEGFLFPLG Trigger: GCCAAGAGGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
||
| CDS CCA 72 bp | GGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTGGTaGACCACTGAGGAGGGATTCATGCCTGAAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GNSAAGPESLTW*TTEEGFMPETL Trigger: CAGAGTTTCAGGCATGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CAA 72 bp | GGGATGCTCTTCTCATCCTGGCTGGGTTCCAAAGGGTaGGCACTGCCTGCAGGGTCTGAGAATGCGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GMLFSSWLGSKG*ALPAGSENAFS Trigger: TGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGCCAGGATGAGAAGAGCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS TCA 72 bp | GCTGGGTTCCAAAGGGTTGGCACTGCCTGCAGGGTCTaGGAATGCGTTCTCAGCCAGACTGCCAATCTTATG | + |
|
Preference number: 6 (lower is better) Translates to: AGFQRVGTACRV*ECVLSQTANLM Trigger: CATAAGATTGGCAGTCTGGCTGAGAACGCATTCTCAGACCCTGCAGGCAGTGCCAACCCTTTGGAACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000373127.8 ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CAA 72 bp | GAGTGCATGCCCATATGGGCAGGCTTCAATATCCTGTaGAGGTCTGAGGGACTGGAGGAGTGGAGCCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ECMPIWAGFNIL*RSEGLEEWSQG Trigger: TCCTTGGCTCCACTCCTCCAGTCCCTCAGACCTCAACAGGATATTGAAGCCTGCCCATATGGGCATGCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590581.1 |
||
| CDS CCA 72 bp | AAAGGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTaGTGGACCACTGAGGAGGGATTCATGCCTGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: KGNSAAGPESLT*WTTEEGFMPET Trigger: AGTTTCAGGCATGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426005.6 ENST00000437044.2 ENST00000590581.1 |
||
| CDS CCA 72 bp | AAAGGCAATTCAGCAGCCGGTCCAGAGTCACTGACGTaGTGGACCACTGAGGAGGGATTCTTGTTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KGNSAAGPESLT*WTTEEGFLFPL Trigger: AAGAGGAAACAAGAATCCCTCCTCAGTGGTCCACCACGTCAGTGACTCTGGACCGGCTGCTGAATTGCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373127.8 |
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| CDS CCA 72 bp | TCTGAGAATGCGTTCTCAGCCAGACTGCCAATCTTATaGGTCTCTTCTTCTTCCTCTGTCAGGCCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: SENAFSARLPIL*VSSSSSVRPGM Trigger: CATTCCTGGCCTGACAGAGGAAGAAGAAGAGACCCATAAGATTGGCAGTCTGGCTGAGAACGCATTCTCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590581.1 |
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