RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TREM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124731

Ensembl transcript IDs: ENST00000244709.9, ENST00000334475.10, ENST00000586287.1, ENST00000589614.5, ENST00000589695.1, ENST00000589882.1, ENST00000591620.1

Found 354 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCACCTGCCAGGGAGGGAGCCCTGAGGACAGAAACCCTGATCTaGCTGTCTCCCCACCCTCGGCTCTCCTCTCATGCTTCCCATTGG +
Preference number: 1 (lower is better)
Translates to: PPPAREGALRTETLI*LSPHPRLSSHASHW
Trigger: CCAATGGGAAGCATGAGAGGAGAGCCGAGGGTGGGGAGACAGTCAGATCAGGGTTTCTGTCCTCAGGGCTCCCTCCCTGGCAGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp TCCCATTGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTaGTTTAGCCACATTGGTCAGGTTCCCAGGCAGGATGGGGAGGAT +
Preference number: 1 (lower is better)
Translates to: SHWLNQPEAGSQGAC*FSHIGQVPRQDGED
Trigger: ATCCTCCCCATCCTGCCTGGGAACCTGACCAATGTGGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp CTTTTACCTCCTCCCTCCTCCCTTGGCACAACTGCCAGATGGATGTaGCTGGAAGTCAGAGGACATTCTCGTGGGTTCGTGGGCCTAGGG +
Preference number: 1 (lower is better)
Translates to: LLPPPSSLGTTARWM*LEVRGHSRGFVGLG
Trigger: CCCTAGGCCCACGAACCCACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGGAGGTAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR GCA 90 bp TGCTTCAGTATGCTGAGGCTGGCAATAGTGGTGGGTCATTCCCACTaGTGGGCCTACAGAGGAGAGGATGGAACAGGTGGCTGGACTTGG +
Preference number: 1 (lower is better)
Translates to: CFSMLRLAIVVGHSH*WAYRGEDGTGGWTW
Trigger: CCAAGTCCAGCCACCTGTTCCATCCTCTCCTCTGTAGGCCCAGCAGTGGGAATGACCCACCACTATTGCCAGCCTCAGCATACTGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp GAGATTGCAAGACAATCTCCCACAGAGATTGTCTCTGTGGTGGCCTaGACACCTACCTGCTTCACCGGGGAGGGCACTGGAGAGAGCATG +
Preference number: 1 (lower is better)
Translates to: EIARQSPTEIVSVVA*TPTCFTGEGTGESM
Trigger: CATGCTCTCTCCAGTGCCCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp TGTGGGAGATTGCAAGACAATCTCCCACAGAGATTGTCTCTGTGGTaGCCTGAACACCTACCTGCTTCACCGGGGAGGGCACTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: CGRLQDNLPQRLSLW*PEHLPASPGRALER
Trigger: TCTCTCCAGTGCCCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCTCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp ATCTGTGGGAGATTGCAAGACAATCTCCCACAGAGATTGTCTCTGTaGTGGCCTGAACACCTACCTGCTTCACCGGGGAGGGCACTGGAG +
Preference number: 1 (lower is better)
Translates to: ICGRLQDNLPQRLSL*WPEHLPASPGRALE
Trigger: CTCCAGTGCCCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCTCCCACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 90 bp TTCCCAGGCAGGATGGGGAGGATGGAGCATGGCGTGGCCTGTAAGTaGAAATGGGAGAGTATCCAGCACGGCCATTTGTCTTCCGATTTA +
Preference number: 1 (lower is better)
Translates to: FPGRMGRMEHGVACK*KWESIQHGHLSSDL
Trigger: TAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTTACAGGCCACGCCATGCTCCATCCTCCCCATCCTGCCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp GGCAGGATGGGGAGGATGGAGCATGGCGTGGCCTGTAAGTGCAAATaGGAGAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCAT +
Preference number: 1 (lower is better)
Translates to: GRMGRMEHGVACKCK*ESIQHGHLSSDLVH
Trigger: ATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTTACAGGCCACGCCATGCTCCATCCTCCCCATCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp AGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAAAACTaGGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCCC +
Preference number: 1 (lower is better)
Translates to: SSVQVRPKLYGPGQN*AGEVSGVPSACHSP
Trigger: GGGGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR TCA 90 bp GAAGTCAGAGGACATTCTCGTGGGTTCGTGGGCCTAGGGTACAAATaGCCTCAGCGTGACAGCAAACAGGACAGAGAAGACCAGGCTCTT +
Preference number: 1 (lower is better)
Translates to: EVRGHSRGFVGLGYK*PQRDSKQDREDQAL
Trigger: AAGAGCCTGGTCTTCTCTGTCCTGTTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCCCACGAACCCACGAGAATGTCCTCTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR CCA 90 bp TTACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATaGGGAAGTCCTTATGCGATGGAGCAGTCTGGAAGCTGGACCTCC +
Preference number: 1 (lower is better)
Translates to: LPLPGQVLTEQHLGE*GSPYAMEQSGSWTS
Trigger: GGAGGTCCAGCTTCCAGACTGCTCCATCGCATAAGGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATaGTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTAT +
Preference number: 1 (lower is better)
Translates to: CLMLERGSPSMGRAG*FCSGSSVQVRPKLY
Trigger: ATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR TCA 90 bp CAGGTGTGCCTTCTGCATGTCACAGCCCCCACAAGAGAATTACGGTaGAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGTGGC +
Preference number: 1 (lower is better)
Translates to: QVCLLHVTAPTRELR*KALSCLYFMPTPSG
Trigger: GCCACTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTTGTGGGGGCTGTGACATGCAGAAGGCACACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR TCA 90 bp ACGGGGCTATTTTCAGGATCCAGCGATAAATGCACACAGGATGTCTaGCATGGTCTGTTGTTGCTCTCCTATGGATCCCATCTCGGCCTG +
Preference number: 1 (lower is better)
Translates to: TGLFSGSSDKCTQDV*HGLLLLSYGSHLGL
Trigger: CAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGACCATGTCAGACATCCTGTGTGCATTTATCGCTGGATCCTGAAAATAGCCCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATaGCCACCCAAGATTATTAGAGGAACGAGGGCAGTGGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: GPSMFGAVTSFLRHK*PPKIIRGTRAVGRK
Trigger: CTTCCTGCCCACTGCCCTCGTTCCTCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR GCA 90 bp GATCCAGCGATAAATGCACACAGGATGTCTGACATGGTCTGTTGTTaGTCTCCTATGGATCCCATCTCGGCCTGCCAGTATTTCCCCAGA +
Preference number: 1 (lower is better)
Translates to: DPAINAHRMSDMVCC*SPMDPISACQYFPR
Trigger: TCTGGGGAAATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGACCATGTCAGACATCCTGTGTGCATTTATCGCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp GCGCTTCAGTTTTCACTCCTGCCAGTGGGCAGTGGCTTATTCATGTaGCCTCGTTCTAGTCACATACATTTCTGCCTTCACGGGGCTATT +
Preference number: 1 (lower is better)
Translates to: ALQFSLLPVGSGLFM*PRSSHIHFCLHGAI
Trigger: AATAGCCCCGTGAAGGCAGAAATGTATGTGACTAGAACGAGGCCACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp TGGGGTCCTTCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAGTaGGCAGTGGCTTATTCATGTGGCCTCGTTCTAGTCACATACATT +
Preference number: 1 (lower is better)
Translates to: WGPSGKERFSFHSCQ*AVAYSCGLVLVTYI
Trigger: AATGTATGTGACTAGAACGAGGCCACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGAAGGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp GGGCCCTGGACTCATAAAGCATTTGCTTTATGCTCCAGGAGAATCTaGTGCGGTGGCCTAAAGACCTCTGAAAAACATTGCCCTCATGTG +
Preference number: 1 (lower is better)
Translates to: GPWTHKAFALCSRRI*CGGLKTSEKHCPHV
Trigger: CACATGAGGGCAATGTTTTTCAGAGGTCTTTAGGCCACCGCATCAGATTCTCCTGGAGCATAAAGCAAATGCTTTATGAGTCCAGGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp AAATTGCGGTTCAGAAATCATCTCTCTAGGGTCATTACCATTACCTaGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: KLRFRNHLSRVITIT*AGSDRAAFRGMGKS
Trigger: GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGTAATGACCCTAGAGAGATGATTTCTGAACCGCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp TGCTTTATGCTCCAGGAGAATCTGATGCGGTGGCCTAAAGACCTCTaGAAAACATTGCCCTCATGTGTTCTGCCTCTCCTAGAGTGTATT +
Preference number: 1 (lower is better)
Translates to: CFMLQENLMRWPKDL*KTLPSCVLPLLECI
Trigger: AATACACTCTAGGAGAGGCAGAACACATGAGGGCAATGTTTTTCAGAGGTCTTTAGGCCACCGCATCAGATTCTCCTGGAGCATAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp TTTAGACACAGGCGGAACTCCTGGTTATTCTATTCTATATGGTTTTaGGGTCCTTCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAG +
Preference number: 1 (lower is better)
Translates to: FRHRRNSWLFYSIWF*GPSGKERFSFHSCQ
Trigger: CTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGAAGGACCCCAAAACCATATAGAATAGAATAACCAGGAGTTCCGCCTGTGTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp AAGCACACAAGCATGCACTGGACCATGCAGTGGGTTATGTCTGGATaGATCTGTATGAATGTGTCATGGGCTTTGGTAAGGAGTGTAATG +
Preference number: 1 (lower is better)
Translates to: KHTSMHWTMQWVMSG*ICMNVSWALVRSVM
Trigger: CATTACACTCCTTACCAAAGCCCATGACACATTCATACAGATTCATCCAGACATAACCCACTGCATGGTCCAGTGCATGCTTGTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp CCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCTCTTaGGAACTGAGGATAATATCTGCCCTGGGCATCACTAAATTGGGC +
Preference number: 1 (lower is better)
Translates to: PNMRHTVCVEKYDCS*ELRIISALGITKLG
Trigger: GCCCAATTTAGTGATGCCCAGGGCAGATATTATCCTCAGTTCCCAAGAGCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 90 bp ATGTGTTCTGCCTCTCCTAGAGTGTATTTAATGATAATACCCCCTTaGCCTGGTCACTTTGTCAACTTCATAAACAGGAACAATGCTGGG +
Preference number: 1 (lower is better)
Translates to: MCSASPRVYLMIIPP*PGHFVNFINRNNAG
Trigger: CCCAGCATTGTTCCTGTTTATGAAGTTGACAAAGTGACCAGGGCAAGGGGGTATTATCATTAAATACACTCTAGGAGAGGCAGAACACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 90 bp ATTTCTCCAGGTTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTaGAAAGAACCACACATAAGCATGAAACCCAAGTGTCTGATGCTA +
Preference number: 1 (lower is better)
Translates to: ISPGSTIFNTLFWEC*KEPHISMKPKCLML
Trigger: TAGCATCAGACACTTGGGTTTCATGCTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAACCTGGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 90 bp CATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTaGTCTTGGGAACTGAGGATAATATCTGCCCTGGGCATCACTAAA +
Preference number: 1 (lower is better)
Translates to: HLPNMRHTVCVEKYD*SWELRIISALGITK
Trigger: TTTAGTGATGCCCAGGGCAGATATTATCCTCAGTTCCCAAGAGCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 90 bp TCATGGGCTTTGGTAAGGAGTGTAATGACTTTTTGGAAACAAGCTTaGGATCCACTAAGAGGGAGCTGTATACTAGTATACAGTAGGTCT +
Preference number: 1 (lower is better)
Translates to: SWALVRSVMTFWKQA*DPLRGSCILVYSRS
Trigger: AGACCTACTGTATACTAGTATACAGCTCCCTCTTAGTGGATCTCAAGCTTGTTTCCAAAAAGTCATTACACTCCTTACCAAAGCCCATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 90 bp ACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTTTAGCCACATaGGTCAGGTTCCCAGGCAGGATGGGGAGGATGGAGCATGGCGTG +
Preference number: 2 (lower is better)
Translates to: TSQKLAAREPAGLAT*VRFPGRMGRMEHGV
Trigger: CACGCCATGCTCCATCCTCCCCATCCTGCCTGGGAACCTGACCAATGTGGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp CCCATTGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTTTAGCCTGCGATGGAGCAGTCTaGAAGCTGGACCTCCCCGTG +
Preference number: 2 (lower is better)
Translates to: PIGSTSQKLAAREPAGLACDGAV*KLDLPV
Trigger: CACGGGGAGGTCCAGCTTCCAGACTGCTCCATCGCA...GGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 90 bp GATCTGACTGTCTCCCCACCCTCGGCTCTCCTCTCATGCTTCCCATaGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTT +
Preference number: 2 (lower is better)
Translates to: DLTVSPPSALLSCFP*AQPARSWQPGSLLV
Trigger: AACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGGAAGCATGAGAGGAGAGCCGAGGGTGGGGAGACAGTCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR GCA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTCTCCCTTGGCACAACTaGCAGATGGATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSLPWHN*QMDVAG
Trigger: TCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAG...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR GCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAGAGAAGTATCAGGTGTaGCTTCTGCATGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: AWGEQDASVVGALSRSGQEKYQV*LLHVTA
Trigger: GGCTGTGACATGCAGAAGGCACACCTGATACTTCTC...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR GCA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTATGGGGCGAGCAGGATaGTTCTGTAGTGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSMGRAG*FCSGSS
Trigger: AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCAT...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAACCAGATGGATGTGGCTaGAAGTCAGAGGACATTCTC +
Preference number: 2 (lower is better)
Translates to: AWGEQDASVVGALSRSGQPDGCG*KSEDIL
Trigger: GAGAATGTCCTCTGACTTCCAGCCACATCCATCTGG...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTCCAACCCCAAGTGGCTaGTGGAATGAAGGACCAAGC +
Preference number: 2 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSPTPSG*WNEGPS
Trigger: GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR TCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCGTCTCTGTGGTGGCCTaGACACCTACCTGCTTCACC +
Preference number: 2 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSVSVVA*TPTCFT
Trigger: GGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGAC...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR GCA 90 bp TCTGGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCACTCCCTTGGCACAACTaGCAGATGGATGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SGSWTSPCRELFPQKWCSLPWHN*QMDVAG
Trigger: TCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAG...TGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTAAGTGGCTGGTGGAATaGAGGACCAAGCATGTTTGG +
Preference number: 2 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSKWLVE*RTKHVW
Trigger: CCAAACATGCTTGGTCCTTCATTCCACCAGCCACTT...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR TCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTGGTCCAGGGCAAAACTaGGCAGGAGAAGTATCAGGT +
Preference number: 2 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCGPGQN*AGEVSG
Trigger: ACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACC...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR TCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTGGCCTAGGGTACAAATaGCCTCAGCGTGACAGCAAA +
Preference number: 2 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRGLGYK*PQRDSK
Trigger: TTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCC...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR-3UTR CCA 90 bp TCTGGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCAACTGCCAGATGGATGTaGCTGGAAGTCAGAGGACAT +
Preference number: 2 (lower is better)
Translates to: SGSWTSPCRELFPQKWCSTARWM*LEVRGH
Trigger: ATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGT...TGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAGGACCAAGCATGTTTaGGGCTGTAACTTCTTTTCT +
Preference number: 2 (lower is better)
Translates to: AWGEQDASVVGALSRSGQRTKHV*GCNFFS
Trigger: AGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCT...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTACCCCAAGTGGCTGGTaGAATGAAGGACCAAGCATG +
Preference number: 2 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCTPSGW*NEGPSM
Trigger: CATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGT...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp AAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCCCCACACCAACCCCAAGTGGCTaGTGGAATGAAGGACCAAGC +
Preference number: 2 (lower is better)
Translates to: KTEQEKYQVCLLHVTAPTPTPSG*WNEGPS
Trigger: GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG...TGTGGGGGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR CAA 90 bp CTGATTGAAATCTGTGGGAGATTGCAAGACAATCTCCCACAGAGATaGTCTCTGTGGTGGCCTGAACACCTACCTGCTTCACCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LIEICGRLQDNLPQR*SLWWPEHLPASPGR
Trigger: CCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCTCCCACAGATTTCAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGTCCCTGACCCTTGTGTaGTACAGGAAAAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLSLTLV*YRKRGI
Trigger: AATGCCTCTTTTCCTGTATCACACAAGGGTCAGGGA...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCAAGTGGCTGGTGGAATaGAGGACCAAGCATGTTTGG +
Preference number: 2 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSKWLVE*RTKHVW
Trigger: CCAAACATGCTTGGTCCTTCATTCCACCAGCCACTT...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR GCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTTTCTGAGGCACAAATaGCCACCCAAGATTATTAGA +
Preference number: 2 (lower is better)
Translates to: WGEQDASVVGALSRSGQNFLRHK*PPKIIR
Trigger: TCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAA...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR TCA 90 bp CAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCACAAGAGAATTACGGTaGAAAGCATTGAGCTGTCTG +
Preference number: 2 (lower is better)
Translates to: QGKTEQEKYQVCLLHVTATRELR*KALSCL
Trigger: CAGACAGCTCAATGCTTTTCACCGTAATTCTCTTGT...GGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR GCA 90 bp AAGTGCAAATGGGAGAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATGATCCCATCTCGGCCTaGCAGTATTTCCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: KCKWESIQHGHLSSDLVHDPISA*QYFPRR
Trigger: TCTTCTGGGGAAATACTGGCAGGCCGAGATGGGATC...ATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp ACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCAAACTGCCAGATGGATGTaGCTGGAAGTCAGAGGACAT +
Preference number: 2 (lower is better)
Translates to: TKHVWGCNFFSEAQMPTQTARWM*LEVRGH
Trigger: ATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGT...TTGGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR TCA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCAAGCTCCAGCTCCTGCTaGGAGTTATTAGGTGGACAA +
Preference number: 2 (lower is better)
Translates to: HCHYPYGGGVYTHREIRASSSSC*ELLGGQ
Trigger: TTGTCCACCTAATAACTCTCAGCAGGAGCTGGAGCT...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR-3UTR GCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTTTCTGAGGCACAAATaGCCACCCAAGATTATTAGA +
Preference number: 2 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTFLRHK*PPKIIR
Trigger: TCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAA...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR GCA 90 bp AATAAGTTAAGCACACAAGCATGCACTGGACCATGCAGTGGGTTATGTCTGGATATCAGGTGTGCCTTCTaGATGTCACAGCCCCCACAA +
Preference number: 2 (lower is better)
Translates to: NKLSTQACTGPCSGLCLDIRCAF*MSQPPQ
Trigger: TTGTGGGGGCTGTGACATGCAGAAGGCACACCTGAT...ATCCAGACATAACCCACTGCATGGTCCAGTGCATGCTTGTGTGCTTAACTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp GAAATCATCTCTCTAGGGTCATTACCATTACCTGGGCAGGTTCTGACAGAGCAGTTTCACTCCTGCCAGTaGGCAGTGGCTTATTCATGT +
Preference number: 2 (lower is better)
Translates to: EIISLGSLPLPGQVLTEQFHSCQ*AVAYSC
Trigger: ACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAA...CTGCTCTGTCAGAACCTGCCCAGGTAATGGTAATGACCCTAGAGAGATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR GCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAAAGAGTGCTTTCCCACTaGCCATCAGGCCCCTGGGGT +
Preference number: 2 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQRVLSH*PSGPWG
Trigger: ACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCT...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR-3UTR CCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAACCAGATGGATGTGGCTaGAAGTCAGAGGACATTCTC +
Preference number: 2 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKPDGCG*KSEDIL
Trigger: GAGAATGTCCTCTGACTTCCAGCCACATCCATCTGG...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGACCCCAAGTGGCTGGTaGAATGAAGGACCAAGCATG +
Preference number: 2 (lower is better)
Translates to: KRITVKSIELSVFHANPKTPSGW*NEGPSM
Trigger: CATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGT...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CCA 90 bp CAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAATTCACAGAGGACATTCTCGTaGGTTCGTGGGCCTAGGGTA +
Preference number: 2 (lower is better)
Translates to: QEGETLTLEIAGDYRFNSQRTFS*VRGPRV
Trigger: TACCCTAGGCCCACGAACCCACGAGAATGTCCTCTG...TGAATTAAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR-3UTR CCA 90 bp CCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCACGTTTGGTCTGCAGGGGCCCTaGACTCATAAAGCATTTGCT +
Preference number: 2 (lower is better)
Translates to: PARPFVFRFSAYNISVTFGLQGP*THKAFA
Trigger: AGCAAATGCTTTATGAGTCCAGGGCCCCTGCAGACC...AAACGTGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 90 bp TATTTCTCCAGGTTCCACAATCTTCAACACCCTTTTCTGGGAGTGTaGGAAAGAACCACACATAAGCATGAAACCCAAGTGTCTGATGCT +
Preference number: 2 (lower is better)
Translates to: YFSRFHNLQHPFLGV*ERTTHKHETQVSDA
Trigger: AGCATCAGACACTTGGGTTTCATGCTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAACCTGGAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 90 bp GGCGTGGCCTGTAAGTGCAAATGGGAGAGTATCCAGCACGGCCATTaGTCTTCCGATTTAGTGCATATAATATTTCAGTCACGTTTAATA +
Preference number: 2 (lower is better)
Translates to: GVACKCKWESIQHGH*SSDLVHIIFQSRLI
Trigger: TATTAAACGTGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTTACAGGCCACGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCAGGAGGAGGGCAGAGTaGGGAACTAGGCAAGCACAT +
Preference number: 2 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCRRRAE*GTRQAH
Trigger: ATGTGCTTGCCTAGTTCCCCACTCTGCCCTCCTCCT...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCGGTCCAGGGCAAAACTaGGCAGGAGAAGTATCAGGT +
Preference number: 2 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCGPGQN*AGEVSG
Trigger: ACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACC...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGATTTAACTCTTTTCTCTaGGAAGGATGCACTTTCTCA +
Preference number: 2 (lower is better)
Translates to: LTASGSSASAKILTRASGFNSFL*EGCTFS
Trigger: TGAGAAAGTGCATCCTTCTCAGAGAAAAGAGTTAAA...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR GCA 90 bp GAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCGTGGAAAAGTATGATTaGTCTTGGGAACTGAGGATA +
Preference number: 2 (lower is better)
Translates to: EYPARPFVFRFSAYNISVVEKYD*SWELRI
Trigger: TATCCTCAGTTCCCAAGAGCAATCATACTTTTCCAC...GACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR TCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATTTCTACCATGCCTACTaGATTGTCAAAGAAGCTAAA +
Preference number: 2 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYFYHAY*IVKEAK
Trigger: TTTAGCTTCTTTGACAATTCAGTAGGCATGGTAGAA...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR-3UTR CCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCTTCAACACCCTTTTCTaGGAGTGTTGGAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCFNTLF*ECWKEP
Trigger: TGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAA...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CCA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGAGACTAGTGGTGATGTaGAAAAGTATTTCCATCCTG +
Preference number: 2 (lower is better)
Translates to: YLRVINTISMSKNRPMVMRLVVM*KSISIL
Trigger: CAGGATGGAAATACTTTTCCACATCACCACTAGTCT...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR CAA 90 bp TGCCATGACACTGCTTTATTTATGCTTAATGGATCACACTGCAAATaGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATTTGTAT +
Preference number: 2 (lower is better)
Translates to: CHDTALFMLNGSHCK*FPIFWKTIGRCYLY
Trigger: ATACAAATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCCATTAAGCATAAATAAAGCAGTGTCATGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR CCA 72 bp TCTCCCCACCCTCGGCTCTCCTCTCATGCTTCCCATTaGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCC +
Preference number: 3 (lower is better)
Translates to: SPHPRLSSHASH*LNQPEAGSQGA
Trigger: GGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGGAAGCATGAGAGGAGAGCCGAGGGTGGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 72 bp GCCAGGGAGGGAGCCCTGAGGACAGAAACCCTGATCTaGCTGTCTCCCCACCCTCGGCTCTCCTCTCATGCT +
Preference number: 3 (lower is better)
Translates to: AREGALRTETLI*LSPHPRLSSHA
Trigger: AGCATGAGAGGAGAGCCGAGGGTGGGGAGACAGTCAGATCAGGGTTTCTGTCCTCAGGGCTCCCTCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp TTTGCTGAGAGGCTTGAAGGAGCCTTCAGAGGGGAATaGAGCCACTCCTGCCACCACCTGCCAGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: FAERLEGAFRGE*SHSCHHLPGRE
Trigger: CTCCCTCCCTGGCAGGTGGTGGCAGGAGTGGCTGCATTCCCCTCTGAAGGCTCCTTCAAGCCTCTCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp CTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTaGTTTAGCCACATTGGTCAGGTTCCCAGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LNQPEAGSQGAC*FSHIGQVPRQD
Trigger: ATCCTGCCTGGGAACCTGACCAATGTGGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp CTGAGGCTGGCAATAGTGGTGGGTCATTCCCACTGCTaGGCCTACAGAGGAGAGGATGGAACAGGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: LRLAIVVGHSHC*AYRGEDGTGGW
Trigger: CCAGCCACCTGTTCCATCCTCTCCTCTGTAGGCCCAGCAGTGGGAATGACCCACCACTATTGCCAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp CCTCCTCCCTTGGCACAACTGCCAGATGGATGTGGCTaGAAGTCAGAGGACATTCTCGTGGGTTCGTGGGCC +
Preference number: 3 (lower is better)
Translates to: PPPLAQLPDGCG*KSEDILVGSWA
Trigger: GGCCCACGAACCCACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR GCA 72 bp CTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATaGTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: LERGSPSMGRAG*FCSGSSVQVRP
Trigger: TGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR CCA 72 bp CCACATTGGTCAGGTTCCCAGGCAGGATGGGGAGGATaGAGCATGGCGTGGCCTGTAAGTGCAAATGGGAGA +
Preference number: 3 (lower is better)
Translates to: PHWSGSQAGWGG*SMAWPVSANGR
Trigger: TCTCCCATTTGCACTTACAGGCCACGCCATGCTCCATCCTCCCCATCCTGCCTGGGAACCTGACCAATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp GTCTGTTGTTGCTCTCCTATGGATCCCATCTCGGCCTGCCAGTATTTCCCCAGACTCCTCCCTCCTCCCTaGGCACAACTGCCAGATGGA +
Preference number: 3 (lower is better)
Translates to: VCCCSPMDPISACQYFPRLLPPP*AQLPDG
Trigger: TCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGGAG...TCTGGGGAAATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTCTCCTCCCTCCTCCCTaGGCACAACTGCCAGATGGA +
Preference number: 3 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCLLPPP*AQLPDG
Trigger: TCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGGAG...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR CCA 72 bp TTGCAAGACAATCTCCCACAGAGATTGTCTCTGTGGTaGCCTGAACACCTACCTGCTTCACCGGGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: LQDNLPQRLSLW*PEHLPASPGRA
Trigger: TGCCCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp CAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTaGGTTCGTGGGCCTAGGGTACAAATGACCTCAGCG +
Preference number: 3 (lower is better)
Translates to: QMDVAGSQRTFS*VRGPRVQMTSA
Trigger: CGCTGAGGTCATTTGTACCCTAGGCCCACGAACCCACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR-3UTR CAA 90 bp CCCATTGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTTTAGCCTTTTTGGAAACAAGCTaGAGATCCACTAAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: PIGSTSQKLAAREPAGLAFLETS*RSTKRE
Trigger: CTCCCTCTTAGTGGATCTCAAGCTTGTTTCCAAAAA...GGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 72 bp GGACATTCTCGTGGGTTCGTGGGCCTAGGGTACAAATaGCCTCAGCGTGACAGCAAACAGGACAGAGAAGAC +
Preference number: 3 (lower is better)
Translates to: GHSRGFVGLGYK*PQRDSKQDRED
Trigger: GTCTTCTCTGTCCTGTTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCCCACGAACCCACGAGAATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
3UTR GCA 72 bp TATGCGATGGAGCAGTCTGGAAGCTGGACCTCCCCGTaGAGGGAACTTTTTCCACAGAAGTGGTGCTCATTG +
Preference number: 3 (lower is better)
Translates to: YAMEQSGSWTSP*RELFPQKWCSL
Trigger: CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCCAGACTGCTCCATCGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp AGATTGCAAGACAATCTCCCACAGAGATTGTCTCTGTaGTGGCCTGAACACCTACCTGCTTCACCGGGGAGG +
Preference number: 3 (lower is better)
Translates to: RLQDNLPQRLSL*WPEHLPASPGR
Trigger: CCTCCCCGGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGAATCTCCCACAGAGATaGTCTCTGTGGTGGCCTGAA +
Preference number: 3 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLNLPQR*SLWWPE
Trigger: TTCAGGCCACCACAGAGACAATCTCTGTGGGAGATT...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp CCCATTGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTTTAGCCGAGTGTAATGACTTTTaGGAAACAAGCTTGAGATCC +
Preference number: 3 (lower is better)
Translates to: PIGSTSQKLAAREPAGLAECNDF*ETSLRS
Trigger: GGATCTCAAGCTTGTTTCCAAAAAGTCATTACACTC...GGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp TCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAGTaGGCAGTGGCTTATTCATGTGGCCTCGTTCTAGTC +
Preference number: 3 (lower is better)
Translates to: SGKERFSFHSCQ*AVAYSCGLVLV
Trigger: GACTAGAACGAGGCCACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAACAGGTCAGGCCAAAATaGTATGGTCCAGGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQQVRPK*YGPGQN
Trigger: GTTTTGCCCTGGACCATACAATTTTGGCCTGACCTG...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR-3UTR CAA 90 bp TCTGGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCACCTTTTCTGGGAGTGTaGGAAAGAACCACACATAAG +
Preference number: 3 (lower is better)
Translates to: SGSWTSPCRELFPQKWCSPFLGV*ERTTHK
Trigger: CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGG...TGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp ACAGGATGTCTGACATGGTCTGTTGTTGCTCTCCTATaGATCCCATCTCGGCCTGCCAGTATTTCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: TGCLTWSVVALL*IPSRPASISPE
Trigger: TTCTGGGGAAATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGACCATGTCAGACATCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGACTGGGCATCACTAAATaGGGCTGGAAGGACCCACCA +
Preference number: 3 (lower is better)
Translates to: LTASGSSASAKILTRASGLGITK*GWKDPP
Trigger: TGGTGGGTCCTTCCAGCCCAATTTAGTGATGCCCAG...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp GCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTaGATGTCACAGCCCCCACAAGAGAATTACGGTGAA +
Preference number: 3 (lower is better)
Translates to: AKLSRRSIRCAF*MSQPPQENYGE
Trigger: TTCACCGTAATTCTCTTGTGGGGGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR CCA 72 bp TTGAGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTaGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTA +
Preference number: 3 (lower is better)
Translates to: LSCLYFMPTPSG*WNEGPSMFGAV
Trigger: TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR GCA 72 bp ATAAATGCACACAGGATGTCTGACATGGTCTGTTGTTaGTCTCCTATGGATCCCATCTCGGCCTGCCAGTAT +
Preference number: 3 (lower is better)
Translates to: INAHRMSDMVCC*SPMDPISACQY
Trigger: ATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGACCATGTCAGACATCCTGTGTGCATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp TTTTCACTCCTGCCAGTGGGCAGTGGCTTATTCATGTaGCCTCGTTCTAGTCACATACATTTCTGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: FSLLPVGSGLFM*PRSSHIHFCLH
Trigger: GTGAAGGCAGAAATGTATGTGACTAGAACGAGGCCACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 72 bp TCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATaGAGGACCAAGCATGTTTGGGGCTGTAACTTCTTT +
Preference number: 3 (lower is better)
Translates to: SVFHANPKWLVE*RTKHVWGCNFF
Trigger: AAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR TCA 72 bp AGCATGCACTGGACCATGCAGTGGGTTATGTCTGGATaGATCTGTATGAATGTGTCATGGGCTTTGGTAAGG +
Preference number: 3 (lower is better)
Translates to: SMHWTMQWVMSG*ICMNVSWALVR
Trigger: CCTTACCAAAGCCCATGACACATTCATACAGATTCATCCAGACATAACCCACTGCATGGTCCAGTGCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp ATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATaGCCACCCAAGATTATTAGAGGAACGAGGGCAGTG +
Preference number: 3 (lower is better)
Translates to: MFGAVTSFLRHK*PPKIIRGTRAV
Trigger: CACTGCCCTCGTTCCTCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
3UTR CCA 72 bp CACAAGCATGCACTGGACCATGCAGTGGGTTATGTCTaGATGAATCTGTATGAATGTGTCATGGGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: HKHALDHAVGYV*MNLYECVMGFG
Trigger: ACCAAAGCCCATGACACATTCATACAGATTCATCCAGACATAACCCACTGCATGGTCCAGTGCATGCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR-3UTR CAA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGATCAGGCCCCTGGGGTaGGATGAGCTCCACTGGAAC +
Preference number: 3 (lower is better)
Translates to: YLRVINTISMSKNRPMVMIRPLG*DELHWN
Trigger: GTTCCAGTGGAGCTCATCCAACCCCAGGGGCCTGAT...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR TCA 72 bp TTTTCAGGATCCAGCGATAAATGCACACAGGATGTCTaGCATGGTCTGTTGTTGCTCTCCTATGGATCCCAT +
Preference number: 3 (lower is better)
Translates to: FSGSSDKCTQDV*HGLLLLSYGSH
Trigger: ATGGGATCCATAGGAGAGCAACAACAGACCATGTCAGACATCCTGTGTGCATTTATCGCTGGATCCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp AACATGAGACACACGGTATGTGTGGAAAAGTATGATTaGTCTTGGGAACTGAGGATAATATCTGCCCTGGGC +
Preference number: 3 (lower is better)
Translates to: NMRHTVCVEKYD*SWELRIISALG
Trigger: GCCCAGGGCAGATATTATCCTCAGTTCCCAAGAGCAATCATACTTTTCCACACATACCGTGTGTCTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp AGGCGGAACTCCTGGTTATTCTATTCTATATGGTTTTaGGGTCCTTCAGGTAAGGAGCGCTTCAGTTTTCAC +
Preference number: 3 (lower is better)
Translates to: RRNSWLFYSIWF*GPSGKERFSFH
Trigger: GTGAAAACTGAAGCGCTCCTTACCTGAAGGACCCCAAAACCATATAGAATAGAATAACCAGGAGTTCCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CCA 72 bp TTCAGAAATCATCTCTCTAGGGTCATTACCATTACCTaGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATG +
Preference number: 3 (lower is better)
Translates to: FRNHLSRVITIT*AGSDRAAFRGM
Trigger: CATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGTAATGACCCTAGAGAGATGATTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR TCA 72 bp ACTCATAAAGCATTTGCTTTATGCTCCAGGAGAATCTaGTGCGGTGGCCTAAAGACCTCTGAAAAACATTGC +
Preference number: 3 (lower is better)
Translates to: THKAFALCSRRI*CGGLKTSEKHC
Trigger: GCAATGTTTTTCAGAGGTCTTTAGGCCACCGCATCAGATTCTCCTGGAGCATAAAGCAAATGCTTTATGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp GCCTCTCCTAGAGTGTATTTAATGATAATACCCCCTTaGCCTGGTCACTTTGTCAACTTCATAAACAGGAAC +
Preference number: 3 (lower is better)
Translates to: ASPRVYLMIIPP*PGHFVNFINRN
Trigger: GTTCCTGTTTATGAAGTTGACAAAGTGACCAGGGCAAGGGGGTATTATCATTAAATACACTCTAGGAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR GCA 72 bp CGTGTCTGTAAGCCTGCCATGACACTGCTTTATTTATaGTTAATGGATCACACTGCAAATTGTTTCCAATCT +
Preference number: 3 (lower is better)
Translates to: RVCKPAMTLLYL*LMDHTANCFQS
Trigger: AGATTGGAAACAATTTGCAGTGTGATCCATTAAGCATAAATAAAGCAGTGTCATGGCAGGCTTACAGACACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR-3UTR CAA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAAACCATGCCTACTGAATaGTCAAAGAAGCTAAAGCCA +
Preference number: 3 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQTMPTE*SKKLKP
Trigger: TGGCTTTAGCTTCTTTGACAATTCAGTAGGCATGGT...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR CAA 72 bp GTCTCCCCACCCTCGGCTCTCCTCTCATGCTTCCCATaGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VSPPSALLSCFP*AQPARSWQPGS
Trigger: GCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGGAAGCATGAGAGGAGAGCCGAGGGTGGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGGTTGGATGAGCGGAGACATCGGCAGTTaGCTTGGGTGGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PSLRVLSHCPSGPWGWMSGDIGS*LGWSLG
Trigger: ACCCAAGCTCCACCCAAGTCAACTGCCGATGTCTCC...GCTCATCCAACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp CCTCCCTCCTCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGAGAATGCAGCCACTCCTaGCACCACCTGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSSLGTTARWMWLEVRGECSHS*HHLPGR
Trigger: CCTCCCTGGCAGGTGGTGGCAGGAGTGGCTGCATTC...TCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAGCAGCCCCCAGAGCCTaGTCTTCCTCATCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQAAPRA*SSSSFL
Trigger: CAGGAAGGATGAGGAAGACCAGGCTCTGGGGGCTGC...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGGTTGGATGAGCGACTTGGGTGGAGCTTaGGTCACAGTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLRVLSHCPSGPWGWMSDLGGA*VTVLGL
Trigger: CAGCCCCAGAACTGTGACCCAAGCTCCACCCAAGTC...GCTCATCCAACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp CCTCCCTCCTCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACGATCGAACAGCATGTaGGGCTCCTTGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPSSLGTTARWMWLEVRGRSNSM*GSLGGW
Trigger: CCAGCCTCCCAAGGAGCCTCACATGCTGTTCGATCG...TCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCACAGAAACCCTGATCTaGCTGTCTCCCCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSTETLI*LSPHPR
Trigger: CCGAGGGTGGGGAGACAGTCAGATCAGGGTTTCTGT...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAGAGGAAGTCCCAGCATaGGGCGAGCAGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQEEVPA*GEQDAS
Trigger: AGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAACTCCCTTGGCACAACTaGCAGATGGATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQLPWHN*QMDVAG
Trigger: TCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAG...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp AGATCCAGGGCCCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGCCCACTTGGACTGGATaGGAATTCTTTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSRAPHSECFPTAHQAPGPTWTG*EFFEGL
Trigger: GAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGG...CCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGGGCCCTGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATGACTTGGGTGGAGCTTaGGTCACAGTTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGEQDASVVGALSRSGQNDLGGA*VTVLGL
Trigger: CAGCCCCAGAACTGTGACCCAAGCTCCACCCAAGTC...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATGAGGAAGTCCCAGCATaGGGCGAGCAGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: WGEQDASVVGALSRSGQNEEVPA*GEQDAS
Trigger: AGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTCAACCAGCCAGAAGCTaGCAGCCAGGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCQPARS*QPGSLL
Trigger: CAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTG...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAACCAGAATCTTCCACTTaGAGGTTGACCATTCGGACG +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQPESST*RLTIRT
Trigger: CGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGG...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTACGATCGAACAGCATGTaGGGCTCCTTGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVRSNSM*GSLGGW
Trigger: CCAGCCTCCCAAGGAGCCTCACATGCTGTTCGATCG...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAAGTGGCTGGTGGAATaGAGGACCAAGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSKWLVE*RTKHVW
Trigger: CCAAACATGCTTGGTCCTTCATTCCACCAGCCACTT...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGCATGCCAGGGTCTTaGGCATCTCTCCGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: WGEQDASVVGALSRSGQNCMPGS*ASLRPL
Trigger: TAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCA...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCCCAGATGGATGTGGCTaGAAGTCAGAGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSPDGCG*KSEDIL
Trigger: GAGAATGTCCTCTGACTTCCAGCCACATCCATCTGG...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp GTCTGTTGTTGCTCTCCTATGGATCCCATCTCGGCCTGCCAGTATTTCCCCAGAGAGCAGTCTGGAAGCTaGACCTCCCCGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VCCCSPMDPISACQYFPREQSGS*TSPCRE
Trigger: TTCCCTGCACGGGGAGGTCCAGCTTCCAGACTGCTC...TCTGGGGAAATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTTGCGATGGAGCAGTCTaGAAGCTGGACCTCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRCDGAV*KLDLPV
Trigger: CACGGGGAGGTCCAGCTTCCAGACTGCTCCATCGCA...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCGCAGGATGGGGAGGATaGAGCATGGCGTGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSAGWGG*SMAWPV
Trigger: TACAGGCCACGCCATGCTCCATCCTCCCCATCCTGC...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCTCTCATGCTTCCCATTaGCTCAACCAGCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSSHASH*LNQPEA
Trigger: AGCTTCTGGCTGGTTGAGCCAATGGGAAGCATGAGA...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCTTCACATCCAGGGTCTaGCCCTCTTTCAGTTCATAC +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSFTSRV*PSFSSY
Trigger: GTATGAACTGAAAGAGGGGCAGACCCTGGATGTGAA...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp GTCCTTCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAGTGGGCAGTGGCTTCTCCCTTGGCACAACTaGCAGATGGATGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VLQVRSASVFTPASGQWLLPWHN*QMDVAG
Trigger: TCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAG...AAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATATCAGGTGTGCCTTCTaGATGTCACAGCCCCCACAA +
Preference number: 4 (lower is better)
Translates to: WGEQDASVVGALSRSGQNIRCAF*MSQPPQ
Trigger: TTGTGGGGGCTGTGACATGCAGAAGGCACACCTGAT...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTGTGGGTCATTCCCACTaGTGGGCCTACAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTVGHSH*WAYRGE
Trigger: CTCTCCTCTGTAGGCCCAGCAGTGGGAATGACCCAC...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CACCCAAAGTCACATTCAGTTAGTCAGGCCAACACTAGATCCAGGGCCCCTCACGCCCCTCACTCAGAGTaGTTTCCCACTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: HPKSHSVSQANTRSRAPHAPHSE*FPTAHQ
Trigger: CTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGGGC...GTGAGGGGCCCTGGATCTAGTGTTGGCCTGACTAACTGAATGTGACTTTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCGCAGCCCCCAGAGCCTaGTCTTCCTCATCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSAAPRA*SSSSFL
Trigger: CAGGAAGGATGAGGAAGACCAGGCTCTGGGGGCTGC...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATCTACAGAGGAGAGGATaGAACAGGTGGCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: WGEQDASVVGALSRSGQNLQRRG*NRWLDL
Trigger: CAAGTCCAGCCACCTGTTCCATCCTCTCCTCTGTAG...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCGGAGACATCGGCAGTTaGCTTGGGTGGAGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPGDIGS*LGWSLG
Trigger: ACCCAAGCTCCACCCAAGTCAACTGCCGATGTCTCC...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCGTCTCTGTGGTGGCCTaGACACCTACCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPVSVVA*TPTCFT
Trigger: GGTGAAGCAGGTAGGTGTTCAGGCCACCACAGAGAC...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAATTTTGGAAACAAGCTTaGGATCCACTAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQFWKQA*DPLRGS
Trigger: GCTCCCTCTTAGTGGATCTCAAGCTTGTTTCCAAAA...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp GCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTAGGCCTCTCTGTGCATaGCAGGGTCTTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: AGCFCSGSSVQVRPKLYGRPLCA*QGLGHL
Trigger: GAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCT...ACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp TTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTTTGAAGGCCTCTCTGTaGATGCCAGGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: FMPTPSGWWNEGPSMFGALKASL*MPGSWA
Trigger: TGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAA...AGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGGATCCCATCTCGGCCTaGCAGTATTTCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLDPISA*QYFPRR
Trigger: TCTTCTGGGGAAATACTGGCAGGCCGAGATGGGATC...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAAGGCAGCCAGGGAGCCTaGTGGTTTAGCCACATTGGT +
Preference number: 4 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQGSQGA*WFSHIG
Trigger: ACCAATGTGGCTAAACCAGCAGGCTCCCTGGCTGCC...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAATGATCCTCCCCACTTaGACTGGATGGGAATTCTTT +
Preference number: 4 (lower is better)
Translates to: AWGEQDASVVGALSRSGQMILPT*TGWEFF
Trigger: AAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCAT...TTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTCCAACCCCAAGTGGCTaGTGGAATGAAGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTPTPSG*WNEGPS
Trigger: GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCGTTGTTGCTCTCCTATaGATCCCATCTCGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QGKTEQEKYQVCLLHVTAVVALL*IPSRPA
Trigger: GGCAGGCCGAGATGGGATCCATAGGAGAGCAACAAC...GGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTCTTCCACTTGAAGGTTaGCCATTCGGACGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRLPLEG*PFGRAV
Trigger: TACTGCGCGTCCGAATGGTCAACCTTCAAGTGGAAG...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCAGAGAGCATGGAAACTaGGGCAGGTGTTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPREHGN*GRCSRS
Trigger: GCTCCTGGAACACCTGCCTCAGTTTCCATGCTCTCT...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTTGCTCCAGGAGAATCTaGTGCGGTGGCCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: AGCFCSGSSVQVRPKLYGCSRRI*CGGLKT
Trigger: GGTCTTTAGGCCACCGCATCAGATTCTCCTGGAGCA...ACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTTCACCACCAAGCGGATaGGATCGAACAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRSPPSG*DRTACE
Trigger: CTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGA...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp CACCCAAAGTCACATTCAGTTAGTCAGGCCAACACTAGATCCAGGGCCCCTCACTCACCACCAAGCGGATaGGATCGAACAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: HPKSHSVSQANTRSRAPHSPPSG*DRTACE
Trigger: CTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGA...GTGAGGGGCCCTGGATCTAGTGTTGGCCTGACTAACTGAATGTGACTTTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp AAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCCCCACATGCATGCCAGGGTCTTaGGCATCTCTCCGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: KTEQEKYQVCLLHVTAPTCMPGS*ASLRPL
Trigger: TAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCA...TGTGGGGGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCCAGAGGACATTCTCGTaGGTTCGTGGGCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSQRTFS*VRGPRV
Trigger: TACCCTAGGCCCACGAACCCACGAGAATGTCCTCTG...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGCCAGATGGATGTGGCTaGAAGTCAGAGGACATTCTC +
Preference number: 4 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLPDGCG*KSEDIL
Trigger: GAGAATGTCCTCTGACTTCCAGCCACATCCATCTGG...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGACTGCCAGATGGATGTaGCTGGAAGTCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLTARWM*LEVRGH
Trigger: ATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGT...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCGGTCTGCAGGGGCCCTaGACTCATAAAGCATTTGCT +
Preference number: 4 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSGLQGP*THKAFA
Trigger: AGCAAATGCTTTATGAGTCCAGGGCCCCTGCAGACC...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTGGTAGTCTTCTAGTATaGTCCTCCCCACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTGSLLV*SSPLGL
Trigger: CAGTCCAAGTGGGGAGGATCATACTAGAAGACTACC...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCAGGAGCCAGGGGTCCCTaGAAAACCCTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: HCHYPYGGGVYTHREIRAGARGP*KTLGHH
Trigger: GTGGTGACCAAGGGTTTTTCAGGGACCCCTGGCTCC...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCGGCCTAGGGTACAAATaGCCTCAGCGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSGLGYK*PQRDSK
Trigger: TTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCC...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp ATGGTCCAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCGGTCCAGGGCAAAACTaGGCAGGAGAAGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: MVQGKTEQEKYQVCLLHVGPGQN*AGEVSG
Trigger: ACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACC...GACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTATGCACACAGGATGTCTaGCATGGTCTGTTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVCTQDV*HGLLLL
Trigger: GAGCAACAACAGACCATGTCAGACATCCTGTGTGCA...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGTTCACATCCAGGGTCTaGCCCTCTTTCAGTTCATAC +
Preference number: 4 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLFTSRV*PSFSSY
Trigger: GTATGAACTGAAAGAGGGGCAGACCCTGGATGTGAA...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTCCGTCCCTTATTATCTaGCAAGCTTTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTPSLII*QAFWLL
Trigger: CAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGG...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAATCACCACCAAGCGGATaGGATCGAACAGCATGTGAG +
Preference number: 4 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQSPPSG*DRTACE
Trigger: CTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGA...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAAATCAGGTGTGCCTTCTaGATGTCACAGCCCCCACAA +
Preference number: 4 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQIRCAF*MSQPPQ
Trigger: TTGTGGGGGCTGTGACATGCAGAAGGCACACCTGAT...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTTTAAGCACACAAGCATaGACTGGACCATGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCLSTQA*TGPCSG
Trigger: CCCACTGCATGGTCCAGTGCATGCTTGTGTGCTTAA...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGACTCCTGCCACCACCTaGCAGGGAGGGAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KRITVKSIELSVFHANPKTPATT*QGGSPE
Trigger: CTCAGGGCTCCCTCCCTGGCAGGTGGTGGCAGGAGT...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCAGCAGCCCCCAGAGCCTaGTCTTCCTCATCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HCHYPYGGGVYTHREIRAAAPRA*SSSSFL
Trigger: CAGGAAGGATGAGGAAGACCAGGCTCTGGGGGCTGC...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTACCCACTTGGACTGGATaGGAATTCTTTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVPTWTG*EFFEGL
Trigger: GAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGG...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAATCACAGTTCTGGGGCTaGTATAGAGTGGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQSQFWG*YRVGTR
Trigger: CCTTGTGCCCACTCTATACCAGCCCCAGAACTGTGA...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTACCCCAAGTGGCTGGTaGAATGAAGGACCAAGCATG +
Preference number: 4 (lower is better)
Translates to: AGCFCSGSSVQVRPKLYGTPSGW*NEGPSM
Trigger: CATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGT...ACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp ATGGTCCAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACCCCAAGTGGCTGGTaGAATGAAGGACCAAGCATG +
Preference number: 4 (lower is better)
Translates to: MVQGKTEQEKYQVCLLHVTPSGW*NEGPSM
Trigger: CATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGT...GACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTACAGAGATTGTCTCTGTaGTGGCCTGAACACCTACCT +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVQRLSL*WPEHLP
Trigger: AGGTAGGTGTTCAGGCCACCACAGAGACAATCTCTG...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAGAAGTCCTTATGCGATaGAGCAGTCTGGAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVEVLMR*SSLEAG
Trigger: TCCAGCTTCCAGACTGCTCCATCGCATAAGGACTTC...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAGGAGCCAGGGGTCCCTaGAAAACCCTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKGARGP*KTLGHH
Trigger: GTGGTGACCAAGGGTTTTTCAGGGACCCCTGGCTCC...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCAAGTGGCTGGTGGAATaGAGGACCAAGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPKWLVE*RTKHVW
Trigger: CCAAACATGCTTGGTCCTTCATTCCACCAGCCACTT...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp AGTGGGCAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAGGCCTCTCTGTGCATaGCAGGGTCTTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SGQEGETLTLEIAGDYRFRPLCA*QGLGHL
Trigger: GAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCT...AAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp ACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCAAATGGGGCGAGCAGGATaGTTCTGTAGTGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TKHVWGCNFFSEAQMPTQMGRAG*FCSGSS
Trigger: AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCAT...TTGGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp TGTCTGATGCTAGAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTGACATGGTCTGTTGTTaGTCTCCTATGGATCCCATC +
Preference number: 4 (lower is better)
Translates to: CLMLERGSPSMGRAGCFCDMVCC*SPMDPI
Trigger: GATGGGATCCATAGGAGAGCAACAACAGACCATGTC...ACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTCTAGCATCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTAAGCTTTCTGGCTGCTaGCAAACTTCTCTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTKLSGC*QTSLAC
Trigger: ACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTT...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCAAGCTTTCTGGCTGCTaGCAAACTTCTCTAGCGTGT +
Preference number: 4 (lower is better)
Translates to: QGKTEQEKYQVCLLHVTAKLSGC*QTSLAC
Trigger: ACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTT...GGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp GTCTGTTGTTGCTCTCCTATGGATCCCATCTCGGCCTGCCAGTATTTCCCCAGATTTCAGAGTCAGGAGTaGAGACATCGGCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: VCCCSPMDPISACQYFPRFQSQE*RHRQLT
Trigger: AGTCAACTGCCGATGTCTCCACTCCTGACTCTGAAA...TCTGGGGAAATACTGGCAGGCCGAGATGGGATCCATAGGAGAGCAACAACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCTGGGCATCACTAAATTaGGCTGGAAGGACCCACCAT +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSWASLN*AGRTHH
Trigger: ATGGTGGGTCCTTCCAGCCCAATTTAGTGATGCCCA...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCTCCCTGACCCTTGTGTaGTACAGGAAAAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSSLTLV*YRKRGI
Trigger: AATGCCTCTTTTCCTGTATCACACAAGGGTCAGGGA...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTATGGCCTAAAGACCTCTaGAAAACATTGCCCTCATGT +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVWPKDL*KTLPSC
Trigger: ACATGAGGGCAATGTTTTTCAGAGGTCTTTAGGCCA...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp AAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCCCCACATCACTGCCTCTGAGCTaGTTGGTTCTTTTAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KTEQEKYQVCLLHVTAPTSLPLS*LVLLGR
Trigger: CCTACCTAAAAGAACCAAGCAGCTCAGAGGCAGTGA...TGTGGGGGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTACCTCTGAAAAACATTaGCCTCATGTGTTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRTSEKH*PHVFCL
Trigger: GAGGCAGAACACATGAGGGCAATGTTTTTCAGAGGT...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CACCCAAAGTCACATTCAGTTAGTCAGGCCAACACTAGATCCAGGGCCCCTCACATGATCCTCCCCACTTaGACTGGATGGGAATTCTTT +
Preference number: 4 (lower is better)
Translates to: HPKSHSVSQANTRSRAPHMILPT*TGWEFF
Trigger: AAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCAT...GTGAGGGGCCCTGGATCTAGTGTTGGCCTGACTAACTGAATGTGACTTTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp AGTGGGCAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAGGAGGAGGGCAGAGTaGGGAACTAGGCAAGCACAT +
Preference number: 4 (lower is better)
Translates to: SGQEGETLTLEIAGDYRFRRRAE*GTRQAH
Trigger: ATGTGCTTGCCTAGTTCCCCACTCTGCCCTCCTCCT...AAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTGCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCATCACTAAATTGGGCTaGAAGGACCCACCATCCTTT +
Preference number: 4 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSITKLG*KDPPSF
Trigger: AAAGGATGGTGGGTCCTTCCAGCCCAATTTAGTGAT...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAAGTATGATTGCTCTTaGGAACTGAGGATAATATCT +
Preference number: 4 (lower is better)
Translates to: EEVPAWGEQDASVVGALSKYDCS*ELRIIS
Trigger: AGATATTATCCTCAGTTCCCAAGAGCAATCATACTT...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTCCAGGGCAAGTCATTACCATTACCTaGGCAGGTTCTGACAGAGCA +
Preference number: 4 (lower is better)
Translates to: FCSGSSVQVRPKLYGPGQVITIT*AGSDRA
Trigger: TGCTCTGTCAGAACCTGCCCAGGTAATGGTAATGAC...TTGCCCTGGACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TCTTTTCTGAGGCACAAATGCCCACCCAAGATTATTAGAGGAACGAGGGCAGTGAGAGGATGGAACAGGTaGCTGGACTTGGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: SFLRHKCPPKIIRGTRAVRGWNR*LDLEMG
Trigger: TCCCATCTCCAAGTCCAGCCACCTGTTCCATCCTCT...CACTGCCCTCGTTCCTCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGAGGTCATTCCCACTGCTaGGCCTACAGAGGAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LTASGSSASAKILTRASGGHSHC*AYRGED
Trigger: ATCCTCTCCTCTGTAGGCCCAGCAGTGGGAATGACC...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAAACACCGGAACCCCTTaGTCACCACCAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKNTGTP*SPPSGC
Trigger: GCATCCGCTTGGTGGTGACCAAGGGGTTCCGGTGTT...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS-3UTR TCA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGAGGCCTAGGGTACAAATaGCCTCAGCGTGACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LTASGSSASAKILTRASGGLGYK*PQRDSK
Trigger: TTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCC...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTACAAGAGAATTACGGTaGAAAGCATTGAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FMPTPSGWWNEGPSMFGATRELR*KALSCL
Trigger: CAGACAGCTCAATGCTTTTCACCGTAATTCTCTTGT...AGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTATGTGTGGAAAAGTATaGTTGCTCTTGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRMCGKV*LLLGTE
Trigger: CTCAGTTCCCAAGAGCAATCATACTTTTCCACACAT...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TCTTTTCTGAGGCACAAATGCCCACCCAAGATTATTAGAGGAACGAGGGCAGTGGAGAAGTATCAGGTGTaGCTTCTGCATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: SFLRHKCPPKIIRGTRAVEKYQV*LLHVTA
Trigger: GGCTGTGACATGCAGAAGGCACACCTGATACTTCTC...CACTGCCCTCGTTCCTCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp CAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCAAATCTGTGGGAGATTaGAAGACAATCTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QGKTEQEKYQVCLLHVTAKSVGD*KTISHR
Trigger: TCTGTGGGAGATTGTCTTGCAATCTCCCACAGATTT...GGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAAGCTGGACCTCCCCGTaGAGGGAACTTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKSWTSP*RELFPQ
Trigger: CTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCT...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATTGTATGGTATGATCCTCCCCACTTaGACTGGATGGGAATTCTTT +
Preference number: 4 (lower is better)
Translates to: AGCFCSGSSVQVRPKLYGMILPT*TGWEFF
Trigger: AAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCAT...ACCATACAATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCATCCCTGAAAAACCCTTaGTCACCACCAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: HCHYPYGGGVYTHREIRASLKNP*SPPSGC
Trigger: GCATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGA...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTAGGACCAAGCATGTTTaGGGCTGTAACTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FMPTPSGWWNEGPSMFGARTKHV*GCNFFS
Trigger: AGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCT...AGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCTTCAACACCCTTTTCTaGGAGTGTTGGAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSFNTLF*ECWKEP
Trigger: TGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAA...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGTTATTCTATTCTATATGGTTTTGGGGTCCTTCAGGTAAGGAGCGCTTCAGTCCTGCCAGTGGGCAGTaGCTTATTCATGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WLFYSIWFWGPSGKERFSPASGQ*LIHVAS
Trigger: CGAGGCCACATGAATAAGCCACTGCCCACTGGCAGG...ACTGAAGCGCTCCTTACCTGAAGGACCCCAAAACCATATAGAATAGAATAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAAGCCAGGGAGCCTGCTaGTTTAGCCACATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKSQGAC*FSHIGQ
Trigger: CTGACCAATGTGGCTAAACCAGCAGGCTCCCTGGCT...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGATGAAATAAATGCCGATGGAACAGGTGGCTaGACTTGGAGATGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DLVRLQRFSPEHQDEINADGTGG*TWRWEL
Trigger: CAGCTCCCATCTCCAAGTCCAGCCACCTGTTCCATC...GGCATTTATTTCATCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp AGTGGGCAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTGGTAGTCTTCTAGTATaGTCCTCCCCACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: SGQEGETLTLEIAGDYRFGSLLV*SSPLGL
Trigger: CAGTCCAAGTGGGGAGGATCATACTAGAAGACTACC...AAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTGCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp AAGTGCAAATGGGAGAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATCCAGAATCTTCCACTTaGAGGTTGACCATTCGGACG +
Preference number: 4 (lower is better)
Translates to: KCKWESIQHGHLSSDLVHPESST*RLTIRT
Trigger: CGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGG...ATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAGGTCCAGGGCAAAACTaGGCAGGAGAAGTATCAGGT +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKGPGQN*AGEVSG
Trigger: ACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACC...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR TCA 90 bp ACACAGGCGGAACTCCTGGTTATTCTATTCTATATGGTTTTGGGGTCCTTCAGGTTACTCCACCATCCCTaGCCCTTGTGTGATACAGGA +
Preference number: 4 (lower is better)
Translates to: TQAELLVILFYMVLGSFRLLHHP*PLCDTG
Trigger: TCCTGTATCACACAAGGGTCAGGGATGGTGGAGTAA...CCTGAAGGACCCCAAAACCATATAGAATAGAATAACCAGGAGTTCCGCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGATCCTTTCCCCACCCATaGGGCCCATTTCCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LTASGSSASAKILTRASGSFPHP*GPFPFK
Trigger: TTTAAAGGGAAATGGGCCTCATGGGTGGGGAAAGGA...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp ACCATTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCTTTCTGAGGCACAAATaGCCACCCAAGATTATTAGA +
Preference number: 4 (lower is better)
Translates to: TITWAGSDRAAFRGMGKSFLRHK*PPKIIR
Trigger: TCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAA...GGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp ATGTGGCTGGAAGTCAGAGGACATTCTCGTGGGTTCGTGGGCCTAGGGTACAAATTTCTGAGGCACAAATaGCCACCCAAGATTATTAGA +
Preference number: 4 (lower is better)
Translates to: MWLEVRGHSRGFVGLGYKFLRHK*PPKIIR
Trigger: TCTAATAATCTTGGGTGGGCATTTGTGCCTCAGAAA...TTTGTACCCTAGGCCCACGAACCCACGAGAATGTCCTCTGACTTCCAGCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS-3UTR GCA 90 bp ATGTCTTATTTCTCCAGGTTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGATGGGGCGAGCAGGATaGTTCTGTAGTGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: MSYFSRFHNLQHPFLGVLMGRAG*FCSGSS
Trigger: AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCAT...CAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAACCTGGAGAAATAAGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCAGTCACATACATTTCTaGCTTCACGGGGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSSHIHF*LHGAIF
Trigger: GAAAATAGCCCCGTGAAGGCAGAAATGTATGTGACT...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp AGTGGGCAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTGCATGCACTGGACCATaGAGTGGGTTATGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGQEGETLTLEIAGDYRFACTGP*SGLCLD
Trigger: ATCCAGACATAACCCACTGCATGGTCCAGTGCATGC...AAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTGCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATAGAGTGCTTTCCCACTaGCCATCAGGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYRVLSH*PSGPWG
Trigger: ACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCT...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGGAAAGAACCACACATAAGCAGAGGACATTCTCGTaGGTTCGTGGGCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: FHNLQHPFLGVLERTTHKQRTFS*VRGPRV
Trigger: TACCCTAGGCCCACGAACCCACGAGAATGTCCTCTG...CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGCCAACCCCAAGTGGCTaGTGGAATGAAGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: KRITVKSIELSVFHANPKPTPSG*WNEGPS
Trigger: GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTATGTATGAATGTGTCATaGGCTTTGGTAAGGAGTGTA +
Preference number: 4 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVCMNVS*ALVRSV
Trigger: TACACTCCTTACCAAAGCCCATGACACATTCATACA...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTCATTATTATAAACACTaGATCCTGTACAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTHYYKH*ILYSHC
Trigger: GCAGTGACTGTACAGGATGCAGTGTTTATAATAATG...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGGAAAGAACCACACATAAGGGCGTGGCCTGTAAGTaGAAATGGGAGAGTATCCAG +
Preference number: 4 (lower is better)
Translates to: FHNLQHPFLGVLERTTHKGVACK*KWESIQ
Trigger: CTGGATACTCTCCCATTTGCACTTACAGGCCACGCC...CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CACCCAAAGTCACATTCAGTTAGTCAGGCCAACACTAGATCCAGGGCCCCTCACGAGAGGGACCTCATCTaGAAAAATTCTGATTCTATT +
Preference number: 4 (lower is better)
Translates to: HPKSHSVSQANTRSRAPHERDLI*KNSDSI
Trigger: AATAGAATCAGAATTTTTGCAGATGAGGTCCCTCTC...GTGAGGGGCCCTGGATCTAGTGTTGGCCTGACTAACTGAATGTGACTTTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGTCCCTGAAAAACCCTTaGTCACCACCAAGCGGATGC +
Preference number: 4 (lower is better)
Translates to: KRITVKSIELSVFHANPKSLKNP*SPPSGC
Trigger: GCATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGA...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAATTCACTTGGGTCACAGTTCTaGGGCTGGTATAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QEGETLTLEIAGDYRFNSLGSQF*GWYRVG
Trigger: GCCCACTCTATACCAGCCCCAGAACTGTGACCCAAG...TGAATTAAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAACTGCCAGATGGATGTaGCTGGAAGTCAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKTARWM*LEVRGH
Trigger: ATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGT...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp TTAACAGCTTCTGGATCTAGTGCGTCTGCAAAGATTCTCACCAGAGCATCAGGATTTCACTCCTGCCAGTaGGCAGTGGCTTATTCATGT +
Preference number: 4 (lower is better)
Translates to: LTASGSSASAKILTRASGFHSCQ*AVAYSC
Trigger: ACATGAATAAGCCACTGCCCACTGGCAGGAGTGAAA...TCCTGATGCTCTGGTGAGAATCTTTGCAGACGCACTAGATCCAGAAGCTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCTTATCACAGGCGGAACTCCTaGTTATTCTATTCTATATGG +
Preference number: 4 (lower is better)
Translates to: LPGQVLTEQHLGEWGSPYHRRNS*LFYSIW
Trigger: CCATATAGAATAGAATAACCAGGAGTTCCGCCTGTG...ATAAGGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCGGCTGGACTTGGAGATaGGAGCTGTTTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EYPARPFVFRFSAYNISVGWTWR*ELFAER
Trigger: CCTCTCAGCAAACAGCTCCCATCTCCAAGTCCAGCC...GACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGCGATCGAACAGCATGTaGGGCTCCTTGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLRVINTISMSKNRPMVMRSNSM*GSLGGW
Trigger: CCAGCCTCCCAAGGAGCCTCACATGCTGTTCGATCG...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGCCGTCCCTTATTATCTaGCAAGCTTTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KRITVKSIELSVFHANPKPSLII*QAFWLL
Trigger: CAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGG...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR GCA 90 bp CTGAGAGGGACCTCATCTGCAAAAATTCTGATTCTATTTATCTATAATTGGGCAAGGCCTCTCTGTGCATaGCAGGGTCTTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: LRGTSSAKILILFIYNWARPLCA*QGLGHL
Trigger: GAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCT...TGCCCAATTATAGATAAATAGAATCAGAATTTTTGCAGATGAGGTCCCTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp CCAGTATTTCCCCAGAAGAAGATACTCAGTTTAACTCTTTTCTCTGAGAAGGATTTGAAGGCCTCTCTGTaGATGCCAGGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PVFPQKKILSLTLFSEKDLKASL*MPGSWA
Trigger: TGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAA...ATCCTTCTCAGAGAAAAGAGTTAAACTGAGTATCTTCTTCTGGGGAAATACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CACCCAAAGTCACATTCAGTTAGTCAGGCCAACACTAGATCCAGGGCCCCTCACACACTGCTTTATTTATaGTTAATGGATCACACTGCA +
Preference number: 4 (lower is better)
Translates to: HPKSHSVSQANTRSRAPHTLLYL*LMDHTA
Trigger: TGCAGTGTGATCCATTAAGCATAAATAAAGCAGTGT...GTGAGGGGCCCTGGATCTAGTGTTGGCCTGACTAACTGAATGTGACTTTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp AATAAGTTAAGCACACAAGCATGCACTGGACCATGCAGTGGGTTATGTCTGGATCAGCATTTAGGGGAATaGGGAAGTCCTTATGCGATG +
Preference number: 4 (lower is better)
Translates to: NKLSTQACTGPCSGLCLDQHLGE*GSPYAM
Trigger: CATCGCATAAGGACTTCCCCATTCCCCTAAATGCTG...ATCCAGACATAACCCACTGCATGGTCCAGTGCATGCTTGTGTGCTTAACTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAATGCATGCCAGGGTCTTaGGCATCTCTCCGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQCMPGS*ASLRPL
Trigger: TAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCA...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp CAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAATTCACCCACTTGGACTGGATaGGAATTCTTTGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QEGETLTLEIAGDYRFNSPTWTG*EFFEGL
Trigger: GAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGG...TGAATTAAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CCA 90 bp CAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAATTCAAGATTGTCTCTGTGGTaGCCTGAACACCTACCTGCT +
Preference number: 4 (lower is better)
Translates to: QEGETLTLEIAGDYRFNSRLSLW*PEHLPA
Trigger: AGCAGGTAGGTGTTCAGGCCACCACAGAGACAATCT...TGAATTAAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCACGTTTCACACAAGCATGCACTaGACCATGCAGTGGGTTATG +
Preference number: 4 (lower is better)
Translates to: PARPFVFRFSAYNISVTFHTSMH*TMQWVM
Trigger: CATAACCCACTGCATGGTCCAGTGCATGCTTGTGTG...AAACGTGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 72 bp AGGTTCCACAATCTTCAACACCCTTTTCTGGGAGTGTaGGAAAGAACCACACATAAGCATGAAACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: RFHNLQHPFLGV*ERTTHKHETQV
Trigger: CACTTGGGTTTCATGCTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAACTTCCACTTGAAGGTTaGCCATTCGGACGCGCAGTA +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQLPLEG*PFGRAV
Trigger: TACTGCGCGTCCGAATGGTCAACCTTCAAGTGGAAG...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATCCAGAATCTTCCACTTaGAGGTTGACCATTCGGACG +
Preference number: 4 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYPESST*RLTIRT
Trigger: CGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGG...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATAGCTCCAGCTCCTGCTaGGAGTTATTAGGTGGACAA +
Preference number: 4 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYSSSSC*ELLGGQ
Trigger: TTGTCCACCTAATAACTCTCAGCAGGAGCTGGAGCT...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGTTGAAGGCCTCTCTGTaGATGCCAGGGTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLRVINTISMSKNRPMVMLKASL*MPGSWA
Trigger: TGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAA...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp CTGAGAGGGACCTCATCTGCAAAAATTCTGATTCTATTTATCTATAATTGGGCATCACAGTTCTGGGGCTaGTATAGAGTGGGCACAAGG +
Preference number: 4 (lower is better)
Translates to: LRGTSSAKILILFIYNWASQFWG*YRVGTR
Trigger: CCTTGTGCCCACTCTATACCAGCCCCAGAACTGTGA...TGCCCAATTATAGATAAATAGAATCAGAATTTTTGCAGATGAGGTCCCTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGCTTGGGTCACAGTTCTaGGGCTGGTATAGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YLRVINTISMSKNRPMVMLGSQF*GWYRVG
Trigger: GCCCACTCTATACCAGCCCCAGAACTGTGACCCAAG...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAAAGTGGCTTATTCATGTaGCCTCGTTCTAGTCACATA +
Preference number: 4 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKSGLFM*PRSSHI
Trigger: TATGTGACTAGAACGAGGCCACATGAATAAGCCACT...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAAGGTAGTCTTCTAGTATaGTCCTCCCCACTTGGACTG +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQGSLLV*SSPLGL
Trigger: CAGTCCAAGTGGGGAGGATCATACTAGAAGACTACC...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp CAGGAAGGTGAGACGCTGACTTTAGAAATAGCCGGTGATTACAGATTTAATTCAATGATAATACCCCCTTaGCCTGGTCACTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QEGETLTLEIAGDYRFNSMIIPP*PGHFVN
Trigger: GTTGACAAAGTGACCAGGGCAAGGGGGTATTATCAT...TGAATTAAATCTGTAATCACCGGCTATTTCTAAAGTCAGCGTCTCACCTTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCATTTGGGTTTCTACCATaGCTACTGAATTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HCHYPYGGGVYTHREIRAFGFLP*LLNCQR
Trigger: TCTTTGACAATTCAGTAGGCATGGTAGAAACCCAAA...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATTTTCAGAGTCAGGAGTaGAGACATCGGCAGTTGACT +
Preference number: 4 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYFQSQE*RHRQLT
Trigger: AGTCAACTGCCGATGTCTCCACTCCTGACTCTGAAA...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp ATGTCTTATTTCTCCAGGTTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGAGGACCAAGCATGTTTaGGGCTGTAACTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MSYFSRFHNLQHPFLGVLRTKHV*GCNFFS
Trigger: AGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCT...CAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAACCTGGAGAAATAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp TGGTTATTCTATTCTATATGGTTTTGGGGTCCTTCAGGTAAGGAGCGCTTCAGTCTTTTCTGGGAGTGTTaGAAAGAACCACACATAAGC +
Preference number: 4 (lower is better)
Translates to: WLFYSIWFWGPSGKERFSLFWEC*KEPHIS
Trigger: GCTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAG...ACTGAAGCGCTCCTTACCTGAAGGACCCCAAAACCATATAGAATAGAATAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCACAGGATGTCTGACATaGTCTGTTGTTGCTCTCCTA +
Preference number: 4 (lower is better)
Translates to: EYPARPFVFRFSAYNISVTGCLT*SVVALL
Trigger: TAGGAGAGCAACAACAGACCATGTCAGACATCCTGT...GACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCGCCTGTAAGTGCAAATaGGAGAGTATCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCACKCK*ESIQHG
Trigger: GCCGTGCTGGATACTCTCCCATTTGCACTTACAGGC...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAAAGGGGCCCAGGGACCTaGAAACTATACCTGATGATA +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQRGPGT*KLYLMI
Trigger: TATCATCAGGTATAGTTTCCAGGTCCCTGGGCCCCT...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
3UTR CAA 72 bp GGAAATAACAAAATCCTGATTGAAATCTGTGGGAGATaGCAAGACAATCTCCCACAGAGATTGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GNNKILIEICGR*QDNLPQRLSLW
Trigger: CCACAGAGACAATCTCTGTGGGAGATTGTCTTGCAATCTCCCACAGATTTCAATCAGGATTTTGTTATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp CTGAGAGGGACCTCATCTGCAAAAATTCTGATTCTATTTATCTATAATTGGGCATTCACATCCAGGGTCTaGCCCTCTTTCAGTTCATAC +
Preference number: 4 (lower is better)
Translates to: LRGTSSAKILILFIYNWAFTSRV*PSFSSY
Trigger: GTATGAACTGAAAGAGGGGCAGACCCTGGATGTGAA...TGCCCAATTATAGATAAATAGAATCAGAATTTTTGCAGATGAGGTCCCTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCGAGAAGTATCAGGTGTaGCTTCTGCATGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCEKYQV*LLHVTA
Trigger: GGCTGTGACATGCAGAAGGCACACCTGATACTTCTC...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR GCA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGTGGGGAAAAAGGCACTaGCACTACCCATATGGAGGT +
Preference number: 4 (lower is better)
Translates to: YLRVINTISMSKNRPMVMWGKRH*HYPYGG
Trigger: ACCTCCATATGGGTAGTGGCAGTGCCTTTTTCCCCA...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CCA 90 bp TTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGGAAAGAACCACACATAAGGACACACGGTATGTGTaGAAAAGTATGATTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FHNLQHPFLGVLERTTHKDTRYV*KSMIAL
Trigger: AAGAGCAATCATACTTTTCCACACATACCGTGTGTC...CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CCAGTATTTCCCCAGAAGAAGATACTCAGTTTAACTCTTTTCTCTGAGAAGGATAATACCCCCTTGCCCTaGTCACTTTGTCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: PVFPQKKILSLTLFSEKDNTPLP*SLCQLH
Trigger: ATGAAGTTGACAAAGTGACCAGGGCAAGGGGGTATT...ATCCTTCTCAGAGAAAAGAGTTAAACTGAGTATCTTCTTCTGGGGAAATACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp TTCCACAATCTTCAACACCCTTTTCTGGGAGTGTTGGAAAGAACCACACATAAGTTTAACTCTTTTCTCTaGGAAGGATGCACTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FHNLQHPFLGVLERTTHKFNSFL*EGCTFS
Trigger: TGAGAAAGTGCATCCTTCTCAGAGAAAAGAGTTAAA...CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGGGTGTTGAAGATTGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp CCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCACGTTTGCAGTGGGTTATGTCTaGATGAATCTGTATGAATGT +
Preference number: 4 (lower is better)
Translates to: PARPFVFRFSAYNISVTFAVGYV*MNLYEC
Trigger: ACATTCATACAGATTCATCCAGACATAACCCACTGC...AAACGTGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
3UTR CAA 72 bp TGTAAGTGCAAATGGGAGAGTATCCAGCACGGCCATTaGTCTTCCGATTTAGTGCATATAATATTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: CKCKWESIQHGH*SSDLVHIIFQS
Trigger: TGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTCTCCCATTTGCACTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAATCTGTAAGCCTGCCATaGCACTGCTTTATTTATGCT +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQSVSLP*HCFIYA
Trigger: AGCATAAATAAAGCAGTGTCATGGCAGGCTTACAGA...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCACAAGAGAATTACGGTaGAAAGCATTGAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCTRELR*KALSCL
Trigger: CAGACAGCTCAATGCTTTTCACCGTAATTCTCTTGT...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCTACATTTACCTAACATaGGACACACGGTATGTGTGG +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCYIYLT*DTRYVW
Trigger: CCACACATACCGTGTGTCTCATGTTAGGTAAATGTA...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CCA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATCTAAGAACAGGCCAATaGTTATGTAAGTTATGGCTT +
Preference number: 4 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYLRTGQ*LCKLWL
Trigger: AAGCCATAACTTACATAACCATTGGCCTGTTCTTAG...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR TCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCTGGGTTATGTCTGGATaGATCTGTATGAATGTGTCA +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCWVMSG*ICMNVS
Trigger: TGACACATTCATACAGATTCATCCAGACATAACCCA...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR TCA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAATTCTACCATGCCTACTaGATTGTCAAAGAAGCTAAA +
Preference number: 4 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQFYHAY*IVKEAK
Trigger: TTTAGCTTCTTTGACAATTCAGTAGGCATGGTAGAA...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR GCA 90 bp AAAATACATTTACCTAACATGAGACACACGGTATGTGTGGAAAAGTATGATTGCGTGGAAAAGTATGATTaGTCTTGGGAACTGAGGATA +
Preference number: 4 (lower is better)
Translates to: KIHLPNMRHTVCVEKYDCVEKYD*SWELRI
Trigger: TATCCTCAGTTCCCAAGAGCAATCATACTTTTCCAC...GCAATCATACTTTTCCACACATACCGTGTGTCTCATGTTAGGTAAATGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp AGATCCAGGGCCCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGGTGCATGCCAGGGTCTaGGGCATCTCTCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSRAPHSECFPTAHQAPGVHARV*GISPSL
Trigger: AAGGGACGGAGAGATGCCCAAGACCCTGGCATGCAC...CCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGGGCCCTGGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp CCCATTGGCTCAACCAGCCAGAAGCTGGCAGCCAGGGAGCCTGCTGGTTTAGCCGGAGATGGGAGCTGTTaGCTGAGAGGCTTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: PIGSTSQKLAAREPAGLAGDGSC*LRGLKE
Trigger: CTCCTTCAAGCCTCTCAGCAAACAGCTCCCATCTCC...GGCTAAACCAGCAGGCTCCCTGGCTGCCAGCTTCTGGCTGGTTGAGCCAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCTGGGTAGAATTCTCATaGGAGCCAGGGGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: EEVPAWGEQDASVVGALSWVEFS*EPGVPE
Trigger: TTCAGGGACCCCTGGCTCCAATGAGAATTCTACCCA...GGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GTCCTTCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAGTGGGCAGTGGCTTCTCCTCCCTCCTCCCTaGGCACAACTGCCAGATGGA +
Preference number: 5 (lower is better)
Translates to: VLQVRSASVFTPASGQWLLLPPP*AQLPDG
Trigger: TCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGGAG...AAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAGTGCATGCCAGGGTCTaGGGCATCTCTCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVVHARV*GISPSL
Trigger: AAGGGACGGAGAGATGCCCAAGACCCTGGCATGCAC...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATACATCGGCAGTTGACTaGGGTGGAGCTTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: WGEQDASVVGALSRSGQNTSAVD*GGAWVT
Trigger: TGTGACCCAAGCTCCACCCAAGTCAACTGCCGATGT...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTCTCCTCCCTCCTCCCTaGGCACAACTGCCAGATGGA +
Preference number: 5 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRLLPPP*AQLPDG
Trigger: TCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGGAG...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp CAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCACAGCCGAACACCGGAACCCCTaGGTCACCACCAAGCGGATG +
Preference number: 5 (lower is better)
Translates to: QGKTEQEKYQVCLLHVTAEHRNP*VTTKRM
Trigger: CATCCGCTTGGTGGTGACCAAGGGGTTCCGGTGTTC...GGCTGTGACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS-3UTR CAA 90 bp CCTCCCTCCTCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACAGGTCAGGCCAAAATaGTATGGTCCAGGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: PPSSLGTTARWMWLEVRGQVRPK*YGPGQN
Trigger: GTTTTGCCCTGGACCATACAATTTTGGCCTGACCTG...TCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS GCA 90 bp TCCTCCCCACTTGGACTGGATGGGAATTCTTTGAAGGCCTCTCTGTaGATGCCAGGGTCTTGGGCATCTCTCCGTCCCTTATTATCTGCC +
Preference number: 5 (lower is better)
Translates to: SSPLGLDGNSLKASL*MPGSWASLRPLLSA
Trigger: GGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS-3UTR CAA 90 bp CCTCCCTCCTCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGATATGATCCTCCCCACTaGGACTGGATGGGAATTCTT +
Preference number: 5 (lower is better)
Translates to: PPSSLGTTARWMWLEVRGYDPPH*DWMGIL
Trigger: AAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATA...TCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGAGGAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp ATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAGTCCCTGAAAAACCCTaGGTCACCACCAAGCGGATG +
Preference number: 5 (lower is better)
Translates to: MPTPSGWWNEGPSMFGAVVPEKP*VTTKRM
Trigger: CATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGAC...TACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp CCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGGTTGGATGAGCGTCACATTTGTAAGGTaGATTTCAGAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: PSLRVLSHCPSGPWGWMSVTFVR*ISESGV
Trigger: CACTCCTGACTCTGAAATCAACCTTACAAATGTGAC...GCTCATCCAACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp CCCTCACTCAGAGTGCTTTCCCACTGCCCATCAGGCCCCTGGGGTTGGATGAGCACCATGCCTACTGAATaGTCAAAGAAGCTAAAGCCA +
Preference number: 5 (lower is better)
Translates to: PSLRVLSHCPSGPWGWMSTMPTE*SKKLKP
Trigger: TGGCTTTAGCTTCTTTGACAATTCAGTAGGCATGGT...GCTCATCCAACCCCAGGGGCCTGATGGGCAGTGGGAAAGCACTCTGAGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS CCA 90 bp CTGGATGGGAATTCTTTGAAGGCCTCTCTGTGCATGCCAGGGTCTTaGGCATCTCTCCGTCCCTTATTATCTGCCAAGCTTTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: LDGNSLKASLCMPGS*ASLRPLLSAKLSGC
Trigger: GCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS-3UTR CAA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTATCCAGCACGGCCATTaGTCTTCCGATTTAGTGCAT +
Preference number: 5 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSIQHGH*SSDLVH
Trigger: ATGCACTAAATCGGAAGACAAATGGCCGTGCTGGAT...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp AGCTGTCTGTATTTCATGCCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCAACAGGTGGCTGGACTaGGAGATGGGAGCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SCLYFMPTPSGWWNEGPSNRWLD*EMGAVC
Trigger: GCAAACAGCTCCCATCTCCAAGTCCAGCCACCTGTT...GCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGGCATGAAATACAGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS TCA 90 bp ACATTCTCGTGGGTTCGTGGGCCTAGGGTACAAATGACCTCAGCGTaGCAGCAAACAGGACAGAGAAGACCAGGCTCTTACTCAGGAATC +
Preference number: 5 (lower is better)
Translates to: TFSWVRGPRVQMTSA*QQTGQRRPGSYSGI
Trigger: GATTCCTGAGTAAGAGCCTGGTCTTCTCTGTCCTGTTTGCTGTCACGCTGAGGTCATTTGTACCCTAGGCCCACGAACCCACGAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000589695.1
CDS CCA 90 bp CTGGGAGAAGAACTGACTTATCCGAAAGTGCCCAGTGTGCAGTGGTaGGAGAGGATGGGATTCCACATCCAGCCTTCTGATGCCAAATGT +
Preference number: 5 (lower is better)
Translates to: LGEELTYPKVPSVQW*ERMGFHIQPSDAKC
Trigger: ACATTTGGCATCAGAAGGCTGGATGTGGAATCCCATCCTCTCCCACCACTGCACACTGGGCACTTTCGGATAAGTCAGTTCTTCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589614.5
CDS-3UTR CAA 90 bp TTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCTTATCTGGGCATCACTAAATaGGGCTGGAAGGACCCACCA +
Preference number: 5 (lower is better)
Translates to: LPGQVLTEQHLGEWGSPYLGITK*GWKDPP
Trigger: TGGTGGGTCCTTCCAGCCCAATTTAGTGATGCCCAG...ATAAGGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GTCCTTCAGGTAAGGAGCGCTTCAGTTTTCACTCCTGCCAGTGGGCAGTGGCTTCTGCCTCTGAGCTGCTaGGTTCTTTTAGGTAGGAAA +
Preference number: 5 (lower is better)
Translates to: VLQVRSASVFTPASGQWLLPLSC*VLLGRK
Trigger: TTTCCTACCTAAAAGAACCAAGCAGCTCAGAGGCAG...AAGCCACTGCCCACTGGCAGGAGTGAAAACTGAAGCGCTCCTTACCTGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GAAAGAGGAAGTCCCAGCATGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTAATGATAATACCCCCTaGCCCTGGTCACTTTGTCAA +
Preference number: 5 (lower is better)
Translates to: ERGSPSMGRAGCFCSGSSNDNTP*PWSLCQ
Trigger: TTGACAAAGTGACCAGGGCAAGGGGGTATTATCATT...AGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCATGCTGGGACTTCCTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp CCAACCCCAAGTGGCTGGTGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTAGGAGAATGACAATGTaGAACACCGGAACCCTGATG +
Preference number: 5 (lower is better)
Translates to: PTPSGWWNEGPSMFGAVTRRMTM*NTGTLM
Trigger: CATCAGGGTTCCGGTGTTCAACATTGTCATTCTCCT...AGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCACCAGCCACTTGGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCCAGGTCAGGCCAAAATaGTATGGTCCAGGGCAAAAC +
Preference number: 5 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPQVRPK*YGPGQN
Trigger: GTTTTGCCCTGGACCATACAATTTTGGCCTGACCTG...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp TGGGGCGAGCAGGATGCTTCTGTAGTGGGAGCTCTGTCCAGGTCAGGCCAAAATCTAATGGGCTCAAAATaGCGGTTCAGAAATCATCTC +
Preference number: 5 (lower is better)
Translates to: WGEQDASVVGALSRSGQNLMGSK*RFRNHL
Trigger: GAGATGATTTCTGAACCGCAATTTTGAGCCCATTAG...ATTTTGGCCTGACCTGGACAGAGCTCCCACTACAGAAGCATCCTGCTCGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp ATGGTCCAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCGGAACAATGCTGGGATaGCTAAAGTGTGGGGTTCCA +
Preference number: 5 (lower is better)
Translates to: MVQGKTEQEKYQVCLLHVGTMLG*LKCGVP
Trigger: TGGAACCCCACACTTTAGCAATCCCAGCATTGTTCC...GACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp ATGGTCCAGGGCAAAACTGAGCAGGAGAAGTATCAGGTGTGCCTTCTGCATGTCAGGAGAATGACAATGTaGAACACCGGAACCCCTTGG +
Preference number: 5 (lower is better)
Translates to: MVQGKTEQEKYQVCLLHVRRMTM*NTGTPW
Trigger: CCAAGGGGTTCCGGTGTTCAACATTGTCATTCTCCT...GACATGCAGAAGGCACACCTGATACTTCTCCTGCTCAGTTTTGCCCTGGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS GCA 90 bp TCTTGGGCATCTCTCCGTCCCTTATTATCTGCCAAGCTTTCTGGCTaGTGGCAAACTTCTCTAGCGTGTAGTCACATTTCACATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SWASLRPLLSAKLSG*WQTSLACSHISHPG
Trigger: CCCTGGATGTGAAATGTGACTACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS CCA 90 bp TGGGCATCTCTCCGTCCCTTATTATCTGCCAAGCTTTCTGGCTGCTaGCAAACTTCTCTAGCGTGTAGTCACATTTCACATCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: WASLRPLLSAKLSGC*QTSLACSHISHPGS
Trigger: AGACCCTGGATGTGAAATGTGACTACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS-3UTR CAA 90 bp GGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCTATGATCCTCCCCACTaGGACTGGATGGGAATTCTT +
Preference number: 5 (lower is better)
Translates to: GPSMFGAVTSFLRHKCPPYDPPH*DWMGIL
Trigger: AAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATA...GGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp GGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCATTGGTCACATTTGTAAGGTaGATTTCAGAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSWTSPCRELFPQKWCSLVTFVR*ISESGV
Trigger: CACTCCTGACTCTGAAATCAACCTTACAAATGTGAC...CAATGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp TCTGGAAGCTGGACCTCCCCGTGCAGGGAACTTTTTCCACAGAAGTGGTGCTCAGGACTCATAAAGCATTaGCTTTATGCTCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SGSWTSPCRELFPQKWCSGLIKH*LYAPGE
Trigger: TTCTCCTGGAGCATAAAGCAAATGCTTTATGAGTCC...TGAGCACCACTTCTGTGGAAAAAGTTCCCTGCACGGGGAGGTCCAGCTTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS TCA 90 bp CCATTCGGACGCGCAGTAAACCATGATCATGGTAGTCTTCTAGTATaGTCCTCCCCACTTGGACTGGATGGGAATTCTTTGAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: PFGRAVNHDHGSLLV*SSPLGLDGNSLKAS
Trigger: AGAGGCCTTCAAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATACTAGAAGACTACCATGATCATGGTTTACTGCGCGTCCGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS-3UTR CAA 90 bp GAGTATCCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCGTGCATGCCAGGGTCTaGGGCATCTCTCCGTCCCTT +
Preference number: 5 (lower is better)
Translates to: EYPARPFVFRFSAYNISVVHARV*GISPSL
Trigger: AAGGGACGGAGAGATGCCCAAGACCCTGGCATGCAC...GACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGGATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp CACTGCCACTACCCATATGGAGGTGGAGTCTACACTCATAGAGAAATTAGAGCATGGGTAGAATTCTCATaGGAGCCAGGGGTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: HCHYPYGGGVYTHREIRAWVEFS*EPGVPE
Trigger: TTCAGGGACCCCTGGCTCCAATGAGAATTCTACCCA...TGCTCTAATTTCTCTATGAGTGTAGACTCCACCTCCATATGGGTAGTGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp ACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATGCCCACCCAAAATCTCCCACAGAGATaGTCTCTGTGGTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: TKHVWGCNFFSEAQMPTQNLPQR*SLWWPE
Trigger: TTCAGGCCACCACAGAGACAATCTCTGTGGGAGATT...TTGGGTGGGCATTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS TCA 90 bp AATAGAGATGCAGACCCCTGTACCCATTCAGTTGGAGTGTGCATTTaGAATAAGATCCCCAGGTGGTCTGTGCCCACAGAAAGATGTGAG +
Preference number: 5 (lower is better)
Translates to: NRDADPCTHSVGVCI*NKIPRWSVPTERCE
Trigger: CTCACATCTTTCTGTGGGCACAGACCACCTGGGGATCTTATTTCAAATGCACACTCCAACTGAATGGGTACAGGGGTCTGCATCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS CCA 90 bp CTGGGAAACAAAGGGCTCAGTGTCCAAACCAGGGGCCCAGGGACCTaGAAACTATACCTGATGATATCTGTCACATTTGTAAGGTTGATT +
Preference number: 5 (lower is better)
Translates to: LGNKGLSVQTRGPGT*KLYLMISVTFVRLI
Trigger: AATCAACCTTACAAATGTGACAGATATCATCAGGTATAGTTTCCAGGTCCCTGGGCCCCTGGTTTGGACACTGAGCCCTTTGTTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589882.1
ENST00000591620.1
CDS-3UTR CAA 90 bp GAAATCATCTCTCTAGGGTCATTACCATTACCTGGGCAGGTTCTGACAGAGCAGTCCAGAATCTTCCACTaGAAGGTTGACCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: EIISLGSLPLPGQVLTEQSRIFH*KVDHSD
Trigger: GTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGA...CTGCTCTGTCAGAACCTGCCCAGGTAATGGTAATGACCCTAGAGAGATGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp CCAGCACGGCCATTTGTCTTCCGATTTAGTGCATATAATATTTCAGTCACGTTTTGGAGACATCGGCAGTaGACTTGGGTGGAGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PARPFVFRFSAYNISVTFWRHRQ*TWVELG
Trigger: CCCAAGCTCCACCCAAGTCAACTGCCGATGTCTCCA...AAACGTGACTGAAATATTATATGCACTAAATCGGAAGACAAATGGCCGTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp TTACCTGGGCAGGTTCTGACAGAGCAGCATTTAGGGGAATGGGGAAGTCCTTATCCTTTTCTGGGAGTGTaGGAAAGAACCACACATAAG +
Preference number: 5 (lower is better)
Translates to: LPGQVLTEQHLGEWGSPYPFLGV*ERTTHK
Trigger: CTTATGTGTGGTTCTTTCCAACACTCCCAGAAAAGG...ATAAGGACTTCCCCATTCCCCTAAATGCTGCTCTGTCAGAACCTGCCCAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp TCCCTTGGCACAACTGCCAGATGGATGTGGCTGGAAGTCAGAGGACATTCTCGTGAGTGTAATGACTTTTaGGAAACAAGCTTGAGATCC +
Preference number: 5 (lower is better)
Translates to: SLGTTARWMWLEVRGHSRECNDF*ETSLRS
Trigger: GGATCTCAAGCTTGTTTCCAAAAAGTCATTACACTC...ACGAGAATGTCCTCTGACTTCCAGCCACATCCATCTGGCAGTTGTGCCAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp GGATCACACTGCAAATTGTTTCCAATCTTTTGGAAGACCATTGGTAGATGCTATATCAGGCCCCTGGGGTaGGATGAGCTCCACTGGAAC +
Preference number: 5 (lower is better)
Translates to: GSHCKLFPIFWKTIGRCYIRPLG*DELHWN
Trigger: GTTCCAGTGGAGCTCATCCAACCCCAGGGGCCTGAT...ATAGCATCTACCAATGGTCTTCCAAAAGATTGGAAACAATTTGCAGTGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp TGGAATGAAGGACCAAGCATGTTTGGGGCTGTAACTTCTTTTCTGAGGCACAAATCCAGAATCTTCCACTaGAAGGTTGACCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: WNEGPSMFGAVTSFLRHKSRIFH*KVDHSD
Trigger: GTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGA...TTTGTGCCTCAGAAAAGAAGTTACAGCCCCAAACATGCTTGGTCCTTCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000334475.10
CDS-3UTR CAA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAATGGAGACATCGGCAGTaGACTTGGGTGGAGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQWRHRQ*TWVELG
Trigger: CCCAAGCTCCACCCAAGTCAACTGCCGATGTCTCCA...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAAGTCCCTGAAAAACCCTaGGTCACCACCAAGCGGATG +
Preference number: 5 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQVPEKP*VTTKRM
Trigger: CATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGAC...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp AAGAGAATTACGGTGAAAAGCATTGAGCTGTCTGTATTTCATGCCAACCCCAAGGAAATCTGTGGGAGATaGCAAGACAATCTCCCACAG +
Preference number: 5 (lower is better)
Translates to: KRITVKSIELSVFHANPKEICGR*QDNLPQ
Trigger: CTGTGGGAGATTGTCTTGCAATCTCCCACAGATTTC...CTTGGGGTTGGCATGAAATACAGACAGCTCAATGCTTTTCACCGTAATTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS TCA 90 bp AATTCTTGTGCCCCAACCTTCTCCAAGAATAATTCCAGGCTTACTTaGTTCACTCTGCCTTTCGTTCACCTGGCTTATGGCATATTGCTT +
Preference number: 5 (lower is better)
Translates to: NSCAPTFSKNNSRLT*FTLPFVHLAYGILL
Trigger: AAGCAATATGCCATAAGCCAGGTGAACGAAAGGCAGAGTGAATCAAGTAAGCCTGGAATTATTCTTGGAGAAGGTTGGGGCACAAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS-3UTR CAA 90 bp TATCTCAGAGTTATCAACACTATATCAATGTCTAAGAACAGGCCAATGGTTATGACATCGGCAGTTGACTaGGGTGGAGCTTGGGTCACA +
Preference number: 5 (lower is better)
Translates to: YLRVINTISMSKNRPMVMTSAVD*GGAWVT
Trigger: TGTGACCCAAGCTCCACCCAAGTCAACTGCCGATGT...CATAACCATTGGCCTGTTCTTAGACATTGATATAGTGTTGATAACTCTGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp AATAAGTTAAGCACACAAGCATGCACTGGACCATGCAGTGGGTTATGTCTGGATAATGTGTCATGGGCTTaGGTAAGGAGTGTAATGACT +
Preference number: 5 (lower is better)
Translates to: NKLSTQACTGPCSGLCLDNVSWA*VRSVMT
Trigger: AGTCATTACACTCCTTACCAAAGCCCATGACACATT...ATCCAGACATAACCCACTGCATGGTCCAGTGCATGCTTGTGTGCTTAACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS-3UTR CAA 90 bp CTATATCAATGTCTAAGAACAGGCCAATGGTTATGTAAGTTATGGCTTTCCCAATCCAGAATCTTCCACTaGAAGGTTGACCATTCGGAC +
Preference number: 5 (lower is better)
Translates to: LYQCLRTGQWLCKLWLSQSRIFH*KVDHSD
Trigger: GTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGA...TTGGGAAAGCCATAACTTACATAACCATTGGCCTGTTCTTAGACATTGATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591620.1
CDS-3UTR CAA 90 bp CCAGTATTTCCCCAGAAGAAGATACTCAGTTTAACTCTTTTCTCTGAGAAGGATTTTTTGGAAACAAGCTaGAGATCCACTAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PVFPQKKILSLTLFSEKDFLETS*RSTKRE
Trigger: CTCCCTCTTAGTGGATCTCAAGCTTGTTTCCAAAAA...ATCCTTCTCAGAGAAAAGAGTTAAACTGAGTATCTTCTTCTGGGGAAATACTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244709.9
CDS GCA 72 bp TCCCAGGCCACTCACCCTTGGTCACCACCAAGCGGATaGGATCGAACAGCATGTGAGGCTCCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: SQATHPWSPPSG*DRTACEAPWEA
Trigger: AGCCTCCCAAGGAGCCTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGACCAAGGGTGAGTGGCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586287.1
CDS TCA 72 bp AGAGGTCCTGGGAGGAAGACAGACTGCTGGGAATCCTaGACCCCAGCTCTGCTGATGCTACCACCACTGCCC +
Preference number: 6 (lower is better)
Translates to: RGPGRKTDCWES*TPALLMLPPLP
Trigger: GGGCAGTGGTGGTAGCATCAGCAGAGCTGGGGTTCAGGATTCCCAGCAGTCTGTCTTCCTCCCAGGACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586287.1
CDS GCA 72 bp GGGTCCCTGAAAAACCCTTGGTCACCACCAAGCGGATaGGATCGAACAGCATGTGAGGCTCCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: GSLKNPWSPPSG*DRTACEAPWEA
Trigger: AGCCTCCCAAGGAGCCTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGACCAAGGGTTTTTCAGGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244709.9
ENST00000589614.5
ENST00000591620.1
CDS GCA 72 bp TTGAACACCGGAACCCCTTGGTCACCACCAAGCGGATaGGATCGAACAGCATGTGAGGCTCCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LNTGTPWSPPSG*DRTACEAPWEA
Trigger: AGCCTCCCAAGGAGCCTCACATGCTGTTCGATCGCATCCGCTTGGTGGTGACCAAGGGGTTCCGGTGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS GCA 72 bp CTTGGACTGGATGGGAATTCTTTGAAGGCCTCTCTGTaGATGCCAGGGTCTTGGGCATCTCTCCGTCCCTTA +
Preference number: 6 (lower is better)
Translates to: LGLDGNSLKASL*MPGSWASLRPL
Trigger: TAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAGTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS CCA 72 bp ATCCGAAAGTGCCCAGTGTGCAGTGGTGGGAGAGGATaGGATTCCACATCCAGCCTTCTGATGCCAAATGTC +
Preference number: 6 (lower is better)
Translates to: IRKCPVCSGGRG*DSTSSLLMPNV
Trigger: GACATTTGGCATCAGAAGGCTGGATGTGGAATCCCATCCTCTCCCACCACTGCACACTGGGCACTTTCGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589614.5
CDS CCA 72 bp GAACTGACTTATCCGAAAGTGCCCAGTGTGCAGTGGTaGGAGAGGATGGGATTCCACATCCAGCCTTCTGAT +
Preference number: 6 (lower is better)
Translates to: ELTYPKVPSVQW*ERMGFHIQPSD
Trigger: ATCAGAAGGCTGGATGTGGAATCCCATCCTCTCCCACCACTGCACACTGGGCACTTTCGGATAAGTCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589614.5
CDS CCA 72 bp GAAGAACTGACTTATCCGAAAGTGCCCAGTGTGCAGTaGTGGGAGAGGATGGGATTCCACATCCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: EELTYPKVPSVQ*WERMGFHIQPS
Trigger: AGAAGGCTGGATGTGGAATCCCATCCTCTCCCACCACTGCACACTGGGCACTTTCGGATAAGTCAGTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589614.5
CDS CAA 72 bp TTACTCAGGAATCCACCAGCCAGGAGAATGACAATGTaGAACACCGGAACCCCTTGGTCACCACCAAGCGGA +
Preference number: 6 (lower is better)
Translates to: LLRNPPARRMTM*NTGTPWSPPSG
Trigger: TCCGCTTGGTGGTGACCAAGGGGTTCCGGTGTTCAACATTGTCATTCTCCTGGCTGGTGGATTCCTGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334475.10
CDS CAA 90 bp ACTGGATGGGAATTCTTTGAAGGCCTCTCTGTGCATGCCAGGGTCTaGGGCATCTCTCCGTCCCTTATTATCTGCCAAGCTTTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: TGWEFFEGLSVHARV*GISPSLIICQAFWL
Trigger: CAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTCCCATCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS TCA 72 bp GCAGACCCCTGTACCCATTCAGTTGGAGTGTGCATTTaGAATAAGATCCCCAGGTGGTCTGTGCCCACAGAA +
Preference number: 6 (lower is better)
Translates to: ADPCTHSVGVCI*NKIPRWSVPTE
Trigger: TTCTGTGGGCACAGACCACCTGGGGATCTTATTTCAAATGCACACTCCAACTGAATGGGTACAGGGGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS CAA 72 bp GAATTCTTTGAAGGCCTCTCTGTGCATGCCAGGGTCTaGGGCATCTCTCCGTCCCTTATTATCTGCCAAGCT +
Preference number: 6 (lower is better)
Translates to: EFFEGLSVHARV*GISPSLIICQA
Trigger: AGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS GCA 72 bp GAGTGTGCATTTGAAATAAGATCCCCAGGTGGTCTGTaGCCACAGAAAGATGTGAGAGGGGCTGCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: ECAFEIRSPGGL*PQKDVRGAASE
Trigger: TTCTGAAGCAGCCCCTCTCACATCTTTCTGTGGGCACAGACCACCTGGGGATCTTATTTCAAATGCACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS CCA 72 bp AATTCTTTGAAGGCCTCTCTGTGCATGCCAGGGTCTTaGGCATCTCTCCGTCCCTTATTATCTGCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: NSLKASLCMPGS*ASLRPLLSAKL
Trigger: AAGCTTGGCAGATAATAAGGGACGGAGAGATGCCCAAGACCCTGGCATGCACAGAGAGGCCTTCAAAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS CCA 72 bp AAAGGGCTCAGTGTCCAAACCAGGGGCCCAGGGACCTaGAAACTATACCTGATGATATCTGTCACATTTGTA +
Preference number: 6 (lower is better)
Translates to: KGLSVQTRGPGT*KLYLMISVTFV
Trigger: TACAAATGTGACAGATATCATCAGGTATAGTTTCCAGGTCCCTGGGCCCCTGGTTTGGACACTGAGCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589882.1
ENST00000591620.1
CDS TCA 72 bp CGCGCAGTAAACCATGATCATGGTAGTCTTCTAGTATaGTCCTCCCCACTTGGACTGGATGGGAATTCTTTG +
Preference number: 6 (lower is better)
Translates to: RAVNHDHGSLLV*SSPLGLDGNSL
Trigger: CAAAGAATTCCCATCCAGTCCAAGTGGGGAGGATCATACTAGAAGACTACCATGATCATGGTTTACTGCGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS TCA 72 bp CACACTGATACAGTCCAGAATCTTCCACTTGAAGGTTaGCCATTCGGACGCGCAGTAAACCATGATCATGGT +
Preference number: 6 (lower is better)
Translates to: HTDTVQNLPLEG*PFGRAVNHDHG
Trigger: ACCATGATCATGGTTTACTGCGCGTCCGAATGGTCAACCTTCAAGTGGAAGATTCTGGACTGTATCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS GCA 72 bp TCTCTCCGTCCCTTATTATCTGCCAAGCTTTCTGGCTaGTGGCAAACTTCTCTAGCGTGTAGTCACATTTCA +
Preference number: 6 (lower is better)
Translates to: SLRPLLSAKLSG*WQTSLACSHIS
Trigger: TGAAATGTGACTACACGCTAGAGAAGTTTGCCAGCAGCCAGAAAGCTTGGCAGATAATAAGGGACGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000244709.9
ENST00000334475.10
ENST00000586287.1
ENST00000589614.5
ENST00000591620.1
CDS TCA 72 bp TGCCATCTTTCAGGGCGTAGGTTTTCCTTTATAACATaGATGCAAGGATTGAGTTCCAGCCTGGGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: CHLSGRRFSFIT*MQGLSSSLGEE
Trigger: TTCTTCTCCCAGGCTGGAACTCAATCCTTGCATTCATGTTATAAAGGAAAACCTACGCCCTGAAAGATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589614.5
CDS CAA 72 bp TTACTCAGGAATCCACCAGCCAGGAGAATGACAATGTaGAACACCGGAACCCTGATGATATCTGTCACATTT +
Preference number: 6 (lower is better)
Translates to: LLRNPPARRMTM*NTGTLMISVTF
Trigger: AAATGTGACAGATATCATCAGGGTTCCGGTGTTCAACATTGTCATTCTCCTGGCTGGTGGATTCCTGAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244709.9
ENST00000589695.1
CDS CAA 90 bp AAGCTGAGGAGGGAAATGAGCATGGCCCAAATGCAAAGTTTTCCTTaGCTAAAGCCAAAGAAATACTGTGGAGTCAACCTGAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: KLRREMSMAQMQSFP*LKPKKYCGVNLSQK
Trigger: TTTCTGACTCAGGTTGACTCCACAGTATTTCTTTGGCTTTAGCAAAGGAAAACTTTGCATTTGGGCCATGCTCATTTCCCTCCTCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS CAA 72 bp AGGGAAATGAGCATGGCCCAAATGCAAAGTTTTCCTTaGCTAAAGCCAAAGAAATACTGTGGAGTCAACCTG +
Preference number: 6 (lower is better)
Translates to: REMSMAQMQSFP*LKPKKYCGVNL
Trigger: CAGGTTGACTCCACAGTATTTCTTTGGCTTTAGCAAAGGAAAACTTTGCATTTGGGCCATGCTCATTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589882.1
CDS GCA 72 bp TCTCCAAGAATAATTCCAGGCTTACTTGATTCACTCTaGCTTTCGTTCACCTGGCTTATGGCATATTGCTTT +
Preference number: 6 (lower is better)
Translates to: SPRIIPGLLDSL*LSFTWLMAYCF
Trigger: AAAGCAATATGCCATAAGCCAGGTGAACGAAAGGCAGAGTGAATCAAGTAAGCCTGGAATTATTCTTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589882.1