Pregenerated sensors for TRDV3 (Homo sapiens)

Ensembl gene IDs: ENSG00000256590

Ensembl transcript IDs: ENST00000535880.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GATTTGAATATACAGTGTCGTAAGTGCAGAGCAGTACCACCTCACTaGCACTCGCCACCGTCTGGTCCGGGGAACTCTGGGTTACTTTGT	+
Preference number: 5 (lower is better) Translates to: DLNIQCRKCRAVPPH*HSPPSGPGNSGLLC Trigger: ACAAAGTAACCCAGAGTTCCCCGGACCAGACGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS GCA 90 bp	TCCGGTACCAGAATAAATCTGGATTTGAATATACAGTGTCGTAAGTaGAGAGCAGTACCACCTCACTGCCACTCGCCACCGTCTGGTCCG	+
Preference number: 5 (lower is better) Translates to: SGTRINLDLNIQCRK*RAVPPHCHSPPSGP Trigger: CGGACCAGACGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCAGATTTATTCTGGTACCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS GCA 72 bp	ATACAGTGTCGTAAGTGCAGAGCAGTACCACCTCACTaGCACTCGCCACCGTCTGGTCCGGGGAACTCTGGG	+
Preference number: 6 (lower is better) Translates to: IQCRKCRAVPPH*HSPPSGPGNSG Trigger: CCCAGAGTTCCCCGGACCAGACGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS CCA 72 bp	CAGAGCAGTACCACCTCACTGCCACTCGCCACCGTCTaGTCCGGGGAACTCTGGGTTACTTTGTCACACAGC	+
Preference number: 6 (lower is better) Translates to: QSSTTSLPLATV*SGELWVTLSHS Trigger: GCTGTGTGACAAAGTAACCCAGAGTTCCCCGGACCAGACGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS CCA 72 bp	GGCACAGTAGTAAGTGGCACTGTCTTCAGTCCTTACTaGAGAGATCACCAAGTGAAAGGCTTTCTGGGTCAG	+
Preference number: 6 (lower is better) Translates to: GTVVSGTVFSPY*RDHQVKGFLGQ Trigger: CTGACCCAGAAAGCCTTTCACTTGGTGATCTCTCCAGTAAGGACTGAAGACAGTGCCACTTACTACTGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS GCA 72 bp	AGAATAAATCTGGATTTGAATATACAGTGTCGTAAGTaGAGAGCAGTACCACCTCACTGCCACTCGCCACCG	+
Preference number: 6 (lower is better) Translates to: RINLDLNIQCRK*RAVPPHCHSPP Trigger: CGGTGGCGAGTGGCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCAGATTTATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS TCA 72 bp	GCACTGTCTTCAGTCCTTACTGGAGAGATCACCAAGTaGAAGGCTTTCTGGGTCAGAATGTGTTTCACAGAA	+
Preference number: 6 (lower is better) Translates to: ALSSVLTGEITK*KAFWVRMCFTE Trigger: TTCTGTGAAACACATTCTGACCCAGAAAGCCTTTCACTTGGTGATCTCTCCAGTAAGGACTGAAGACAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS CAA 90 bp	GAAAGGAATAATCTGGCCTTATCCGGTACCAGAATAAATCTGGATTaGAATATACAGTGTCGTAAGTGCAGAGCAGTACCACCTCACTGC	+
Preference number: 6 (lower is better) Translates to: ERNNLALSGTRINLD*NIQCRKCRAVPPHC Trigger: GCAGTGAGGTGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCAGATTTATTCTGGTACCGGATAAGGCCAGATTATTCCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS TCA 72 bp	TTCTGGGTCAGAATGTGTTTCACAGAAAACCGTCCTTaGGTAAAATCTGCACCTTCTGATCTGCTGTTATCC	+
Preference number: 6 (lower is better) Translates to: FWVRMCFTENRP*VKSAPSDLLLS Trigger: GGATAACAGCAGATCAGAAGGTGCAGATTTTACTCAAGGACGGTTTTCTGTGAAACACATTCTGACCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535880.2
CDS CAA 72 bp	AATCTGGCCTTATCCGGTACCAGAATAAATCTGGATTaGAATATACAGTGTCGTAAGTGCAGAGCAGTACCA	+
Preference number: 6 (lower is better) Translates to: NLALSGTRINLD*NIQCRKCRAVP Trigger: TGGTACTGCTCTGCACTTACGACACTGTATATTCAAATCCAGATTTATTCTGGTACCGGATAAGGCCAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000535880.2

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