Pregenerated sensors for TRDV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000211804

Ensembl transcript IDs: ENST00000390452.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAATATAATATGACCACCAACTTGTTTCATACAGGCAGTTCAGGGTaGCTGCTTTCCTCACTGGCATGGATACTGATGACTGGGCTTGAG	+
Preference number: 5 (lower is better) Translates to: KYNMTTNLFHTGSSG*LLSSLAWILMTGLE Trigger: CTCAAGCCCAGTCATCAGTATCCATGCCAGTGAGGAAAGCAGTCACCCTGAACTGCCTGTATGAAACAAGTTGGTGGTCATATTATATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390452.2
CDS GCA 90 bp	GGATTTCGCTGCTTTCTTGAAGTTGACAGAATAGCGACCACTTTTTaGATTCTGTTCATCAGAACCCTGGCGAATAAGGAAAATCATCTC	+
Preference number: 5 (lower is better) Translates to: GFRCFLEVDRIATTF*ILFIRTLANKENHL Trigger: GAGATGATTTTCCTTATTCGCCAGGGTTCTGATGAACAGAATGCAAAAAGTGGTCGCTATTCTGTCAACTTCAAGAAAGCAGCGAAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000390452.2
CDS TCA 72 bp	ATGACCACCAACTTGTTTCATACAGGCAGTTCAGGGTaGCTGCTTTCCTCACTGGCATGGATACTGATGACT	+
Preference number: 6 (lower is better) Translates to: MTTNLFHTGSSG*LLSSLAWILMT Trigger: AGTCATCAGTATCCATGCCAGTGAGGAAAGCAGTCACCCTGAACTGCCTGTATGAAACAAGTTGGTGGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390452.2

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