Pregenerated sensors for TRBV5-1 (Homo sapiens)

Ensembl gene IDs: ENSG00000211734

Ensembl transcript IDs: ENST00000390381.3, ENST00000633384.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ATGTCCTCCCCTTGCAGGCCTCCTGAGGTCCACTGCTCTCTGTTCTaGACAGCAGAATCCACTGGGCCTGTGCCAAGGATTCACTTGTTC	+
Preference number: 5 (lower is better) Translates to: MSSPCRPPEVHCSLF*TAESTGPVPRIHLF Trigger: GAACAAGTGAATCCTTGGCACAGGCCCAGTGGATTCTGCTGTGCAGAACAGAGAGCAGTGGACCTCAGGAGGCCTGCAAGGGGAGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390381.3 ENST00000633384.1
CDS GCA 72 bp	CCTATGTCCTCCCCTTGCAGGCCTCCTGAGGTCCACTaGTCTCTGTTCTGCACAGCAGAATCCACTGGGCCT	+
Preference number: 6 (lower is better) Translates to: PMSSPCRPPEVH*SLFCTAESTGP Trigger: AGGCCCAGTGGATTCTGCTGTGCAGAACAGAGAGCAGTGGACCTCAGGAGGCCTGCAAGGGGAGGACATAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390381.3 ENST00000633384.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu