Pregenerated sensors for TRBV30 (Homo sapiens)
Ensembl gene IDs: ENSG00000237254Ensembl transcript IDs: ENST00000417977.2, ENST00000631690.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCAGCTGGAGGCCCCTGCCTGCAGCCTGTCGGTACCAGTATAGGTTaGGGTTTGATGTTCCCTCCACAGTGCACTCCAGAGAGAGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGGPCLQPVGTSIG*GLMFPPQCTPERAG Trigger: GCCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCCTCCAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS GCA 90 bp | CCTGTCGGTACCAGTATAGGTTGGGGTTTGATGTTCCCTCCACAGTaGACTCCAGAGAGAGCGGGCTGCCCACAGGCTGCACCAGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: PVGTSIGWGLMFPPQ*TPERAGCPQAAPGS Trigger: CGACCCTGGTGCAGCCTGTGGGCAGCCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CCA 90 bp | GAGAGAGCAGAGCATCATCCAAGCCAGCCTTTCCTTCAGCTAGTCTaGGGGACAGACGCCTCCTCTTCTGGGCCAGTGATGTGGTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: ERAEHHPSQPFLQLV*GTDASSSGPVMWSG Trigger: GCCTGACCACATCACTGGCCCAGAAGAGGAGGCGTCTGTCCCCCAGACTAGCTGAAGGAAAGGCTGGCTTGGATGATGCTCTGCTCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CCA 90 bp | GCACTCCAGAGAGAGCGGGCTGCCCACAGGCTGCACCAGGGTCGCTaGCCATTGATGAATAGTCTGAGATCTGACCCCAAAGAAAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALQRERAAHRLHQGR*PLMNSLRSDPKESA Trigger: GGCACTTTCTTTGGGGTCAGATCTCAGACTATTCATCAATGGCCAGCGACCCTGGTGCAGCCTGTGGGCAGCCCGCTCTCTCTGGAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS TCA 90 bp | CTTCTTAGAACTCAGGATGAACTGCCGGTCCTGGGGTCTGGAGGCTaGGAGATTCTGGGGCACCTCAGAGCTGATCTGGCCAATACCAAC | + |
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Preference number: 5 (lower is better) Translates to: LLRTQDELPVLGSGG*EILGHLRADLANTN Trigger: GTTGGTATTGGCCAGATCAGCTCTGAGGTGCCCCAGAATCTCTCAGCCTCCAGACCCCAGGACCGGCAGTTCATCCTGAGTTCTAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CAA 90 bp | GGAGGCCCCTGCCTGCAGCCTGTCGGTACCAGTATAGGTTGGGGTTaGATGTTCCCTCCACAGTGCACTCCAGAGAGAGCGGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GGPCLQPVGTSIGWG*MFPPQCTPERAGCP Trigger: TGGGCAGCCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS GCA 72 bp | ATGTTCCCTCCACAGTGCACTCCAGAGAGAGCGGGCTaGCCACAGGCTGCACCAGGGTCGCTGGCCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: MFPPQCTPERAG*PQAAPGSLAID Trigger: ATCAATGGCCAGCGACCCTGGTGCAGCCTGTGGGCAGCCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CAA 90 bp | AGCAGCTGGAGGCCCCTGCCTGCAGCCTGTCGGTACCAGTATAGGTaGGGGTTTGATGTTCCCTCCACAGTGCACTCCAGAGAGAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSWRPLPAACRYQYR*GFDVPSTVHSRESG Trigger: CCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCCTCCAGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS TCA 72 bp | ACTCAGGATGAACTGCCGGTCCTGGGGTCTGGAGGCTaGGAGATTCTGGGGCACCTCAGAGCTGATCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: TQDELPVLGSGG*EILGHLRADLA Trigger: GGCCAGATCAGCTCTGAGGTGCCCCAGAATCTCTCAGCCTCCAGACCCCAGGACCGGCAGTTCATCCTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CCA 72 bp | GGCCCCTGCCTGCAGCCTGTCGGTACCAGTATAGGTTaGGGTTTGATGTTCCCTCCACAGTGCACTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GPCLQPVGTSIG*GLMFPPQCTPE Trigger: CTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CAA 90 bp | CAGAGAGAGCGGGCTGCCCACAGGCTGCACCAGGGTCGCTGGCCATaGATGAATAGTCTGAGATCTGACCCCAAAGAAAGTGCCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QRERAAHRLHQGRWP*MNSLRSDPKESAQE Trigger: CTCCTGGGCACTTTCTTTGGGGTCAGATCTCAGACTATTCATCAATGGCCAGCGACCCTGGTGCAGCCTGTGGGCAGCCCGCTCTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS GCA 72 bp | ACCAGTATAGGTTGGGGTTTGATGTTCCCTCCACAGTaGACTCCAGAGAGAGCGGGCTGCCCACAGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TSIGWGLMFPPQ*TPERAGCPQAA Trigger: TGCAGCCTGTGGGCAGCCCGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS GCA 72 bp | CAATACCAACGGAGTAGAAGAGCAGCTGGAGGCCCCTaGCTGCAGCCTGTCGGTACCAGTATAGGTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QYQRSRRAAGGP*LQPVGTSIGWG Trigger: ACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCCTCCAGCTGCTCTTCTACTCCGTTGGTATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CCA 72 bp | GAGCATCATCCAAGCCAGCCTTTCCTTCAGCTAGTCTaGGGGACAGACGCCTCCTCTTCTGGGCCAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: EHHPSQPFLQLV*GTDASSSGPVM Trigger: CATCACTGGCCCAGAAGAGGAGGCGTCTGTCCCCCAGACTAGCTGAAGGAAAGGCTGGCTTGGATGATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CAA 72 bp | AGGCCCCTGCCTGCAGCCTGTCGGTACCAGTATAGGTaGGGGTTTGATGTTCCCTCCACAGTGCACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RPLPAACRYQYR*GFDVPSTVHSR Trigger: TCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCAGGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS CAA 72 bp | TGCCTGCAGCCTGTCGGTACCAGTATAGGTTGGGGTTaGATGTTCCCTCCACAGTGCACTCCAGAGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: CLQPVGTSIGWG*MFPPQCTPERA Trigger: CGCTCTCTCTGGAGTGCACTGTGGAGGGAACATCAAACCCCAACCTATACTGGTACCGACAGGCTGCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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| CDS TCA 72 bp | GTCTGGAGGCTGAGAGATTCTGGGGCACCTCAGAGCTaGTCTGGCCAATACCAACGGAGTAGAAGAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: VWRLRDSGAPQS*SGQYQRSRRAA Trigger: AGCTGCTCTTCTACTCCGTTGGTATTGGCCAGATCAGCTCTGAGGTGCCCCAGAATCTCTCAGCCTCCAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417977.2 ENST00000631690.1 |
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