Pregenerated sensors for TRBV19 (Homo sapiens)
Ensembl gene IDs: ENSG00000211746, ENSG00000282621Ensembl transcript IDs: ENST00000390393.3, ENST00000632638.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTTGGAAGAGAATGAGAAAAGAGACTTGGCTCGGGGGCTTCTCCTaGCCTAATGTGCAGAGTTTGTCAGAGGCTGGAATGAAGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CWKRMRKETWLGGFS*PNVQSLSEAGMKRW Trigger: CCACCTCTTCATTCCAGCCTCTGACAAACTCTGCACATTAGGCCAGGAGAAGCCCCCGAGCCAAGTCTCTTTTCTCATTCTCTTCCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 90 bp | CTTGGAGCTCCAAGCACTTGTTGGAAGAGAATGAGAAAAGAGACTTaGCTCGGGGGCTTCTCCTGGCCTAATGTGCAGAGTTTGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LGAPSTCWKRMRKET*LGGFSWPNVQSLSE Trigger: CTCTGACAAACTCTGCACATTAGGCCAGGAGAAGCCCCCGAGCCAAGTCTCTTTTCTCATTCTCTTCCAACAAGTGCTTGGAGCTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 90 bp | ACAACTCAGGGTCACATTCTGTCCTTCCTTTCTGAACAGGTACTTTaGGGACTGAGTGATTCCACCATCCACGGTGTTTGCTCCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TTQGHILSFLSEQVL*GLSDSTIHGVCSQE Trigger: CTCCTGGGAGCAAACACCGTGGATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCTGAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390393.3 |
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| CDS TCA 90 bp | AGGGTCACATTCTGTCCTTCCTTTCTGAACAGGTACTTTGGGGACTaGGTGATTCCACCATCCACGGTGTTTGCTCCCAGGAAACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: RVTFCPSFLNRYFGD*VIPPSTVFAPRKQR Trigger: CCTTTGTTTCCTGGGAGCAAACACCGTGGATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000632638.1 |
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| CDS CCA 90 bp | ACACAGCAGAGCACCTGGTTGCTCATAGTGCAAAGGGGGCCTTCTTaGAGCTCCAAGCACTTGTTGGAAGAGAATGAGAAAAGAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: TQQSTWLLIVQRGPS*SSKHLLEENEKRDL Trigger: CAAGTCTCTTTTCTCATTCTCTTCCAACAAGTGCTTGGAGCTCCAAGAAGGCCCCCTTTGCACTATGAGCAACCAGGTGCTCTGCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 90 bp | ACAACTCAGGGTCACATTCTGTCCTTCCTTTCTGAACAGGTACTTTaGGGACTGAGTGATTCCACCATCCACGGTGTTTGCTCCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: TTQGHILSFLSEQVL*GLSDSTIHGVCSQE Trigger: TTCCTGGGAGCAAACACCGTGGATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACCCTGAGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632638.1 |
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| CDS CCA 90 bp | TCCTGGCCTAATGTGCAGAGTTTGTCAGAGGCTGGAATGAAGAGGTaGGAGGTTCCTGGAGATAATCAAGACAGGCTTCCTAATTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SWPNVQSLSEAGMKR*EVPGDNQDRLPNFA Trigger: TGCAAAATTAGGAAGCCTGTCTTGATTATCTCCAGGAACCTCCCACCTCTTCATTCCAGCCTCTGACAAACTCTGCACATTAGGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS TCA 90 bp | GTACCCTTCAGCTATATCTCCTTTCTGAAAGTCATTTACTATCTGTaGGTAGTAGATCAATCTCAGCCCTTGCCCTGGGTCCTGTCGGTA | + |
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Preference number: 5 (lower is better) Translates to: VPFSYISFLKVIYYL*VVDQSQPLPWVLSV Trigger: TACCGACAGGACCCAGGGCAAGGGCTGAGATTGATCTACTACTCACAGATAGTAAATGACTTTCAGAAAGGAGATATAGCTGAAGGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CAA 72 bp | TGGCTCGGGGGCTTCTCCTGGCCTAATGTGCAGAGTTaGTCAGAGGCTGGAATGAAGAGGTGGGAGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WLGGFSWPNVQS*SEAGMKRWEVP Trigger: AGGAACCTCCCACCTCTTCATTCCAGCCTCTGACAAACTCTGCACATTAGGCCAGGAGAAGCCCCCGAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS TCA 72 bp | GCCTTCTTGGAGCTCCAAGCACTTGTTGGAAGAGAATaGGAAAAGAGACTTGGCTCGGGGGCTTCTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AFLELQALVGRE*EKRLGSGASPG Trigger: GCCAGGAGAAGCCCCCGAGCCAAGTCTCTTTTCTCATTCTCTTCCAACAAGTGCTTGGAGCTCCAAGAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS TCA 72 bp | AGAAAGCTGTCGGGTTCTTTTGGGCCGATGTCACAGTaGGAGGAAAGGATTCCTTCTTCTCCCGAGAGACGC | + |
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Preference number: 6 (lower is better) Translates to: RKLSGSFGPMSQ*EERIPSSPERR Trigger: GCGTCTCTCGGGAGAAGAAGGAATCCTTTCCTCTCACTGTGACATCGGCCCAAAAGAACCCGACAGCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CAA 90 bp | AAAGAGACTTGGCTCGGGGGCTTCTCCTGGCCTAATGTGCAGAGTTaGTCAGAGGCTGGAATGAAGAGGTGGGAGGTTCCTGGAGATAAT | + |
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Preference number: 6 (lower is better) Translates to: KETWLGGFSWPNVQS*SEAGMKRWEVPGDN Trigger: ATTATCTCCAGGAACCTCCCACCTCTTCATTCCAGCCTCTGACAAACTCTGCACATTAGGCCAGGAGAAGCCCCCGAGCCAAGTCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS TCA 72 bp | TTCTGTCCTTCCTTTCTGAACAGGTACTTTGGGGACTaGGTGATTCCACCATCCACGGTGTTTGCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FCPSFLNRYFGD*VIPPSTVFAPR Trigger: CCTGGGAGCAAACACCGTGGATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 72 bp | AGCACCTGGTTGCTCATAGTGCAAAGGGGGCCTTCTTaGAGCTCCAAGCACTTGTTGGAAGAGAATGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: STWLLIVQRGPS*SSKHLLEENEK Trigger: TTTCTCATTCTCTTCCAACAAGTGCTTGGAGCTCCAAGAAGGCCCCCTTTGCACTATGAGCAACCAGGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 72 bp | GGTCACATTCTGTCCTTCCTTTCTGAACAGGTACTTTaGGGACTGAGTGATTCCACCATCCACGGTGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GHILSFLSEQVL*GLSDSTIHGVC Trigger: GCAAACACCGTGGATGGTGGAATCACTCAGTCCCCAAAGTACCTGTTCAGAAAGGAAGGACAGAATGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CAA 72 bp | ATAGTGCAAAGGGGGCCTTCTTGGAGCTCCAAGCACTaGTTGGAAGAGAATGAGAAAAGAGACTTGGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: IVQRGPSWSSKH*LEENEKRDLAR Trigger: CCGAGCCAAGTCTCTTTTCTCATTCTCTTCCAACAAGTGCTTGGAGCTCCAAGAAGGCCCCCTTTGCACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CCA 72 bp | AATGTGCAGAGTTTGTCAGAGGCTGGAATGAAGAGGTaGGAGGTTCCTGGAGATAATCAAGACAGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NVQSLSEAGMKR*EVPGDNQDRLP Trigger: AGGAAGCCTGTCTTGATTATCTCCAGGAACCTCCCACCTCTTCATTCCAGCCTCTGACAAACTCTGCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS CAA 72 bp | ACTACTGGCACAGAGATAGAAAGCTGTCGGGTTCTTTaGGGCCGATGTCACAGTGAGAGGAAAGGATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TTGTEIESCRVL*GRCHSERKGFL Trigger: AAGGAATCCTTTCCTCTCACTGTGACATCGGCCCAAAAGAACCCGACAGCTTTCTATCTCTGTGCCAGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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| CDS TCA 72 bp | AGCTATATCTCCTTTCTGAAAGTCATTTACTATCTGTaGGTAGTAGATCAATCTCAGCCCTTGCCCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SYISFLKVIYYL*VVDQSQPLPWV Trigger: GACCCAGGGCAAGGGCTGAGATTGATCTACTACTCACAGATAGTAAATGACTTTCAGAAAGGAGATATAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000390393.3 ENST00000632638.1 |
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