Pregenerated sensors for TRBV14 (Homo sapiens)
Ensembl gene IDs: ENSG00000275743Ensembl transcript IDs: ENST00000617639.1, ENST00000632432.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 72 bp | GTCTGGCCCTTCTCTATTACGCTGTGGCTGGGGAACTaGGTAACTCCAGCTTCTATGTGCTTTGCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VWPFSITLWLGN*VTPASMCFAPR Trigger: CCTGGGAGCAAAGCACATAGAAGCTGGAGTTACTCAGTTCCCCAGCCACAGCGTAATAGAGAAGGGCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617639.1 ENST00000632432.1 |
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| CDS CAA 72 bp | TACGTCCCTCCAGTCCTTTCAGCTAAGAATCGATTGTaGGGCATACCGGACTCATCCTGTTTAGACTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: YVPPVLSAKNRL*GIPDSSCLDSF Trigger: GAAAGAGTCTAAACAGGATGAGTCCGGTATGCCCAACAATCGATTCTTAGCTGAAAGGACTGGAGGGACGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617639.1 ENST00000632432.1 |
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| CDS CAA 72 bp | GAATACGTCCCTCCAGTCCTTTCAGCTAAGAATCGATaGTTGGGCATACCGGACTCATCCTGTTTAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: EYVPPVLSAKNR*LGIPDSSCLDS Trigger: AGAGTCTAAACAGGATGAGTCCGGTATGCCCAACAATCGATTCTTAGCTGAAAGGACTGGAGGGACGTATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000617639.1 ENST00000632432.1 |
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| CDS CAA 90 bp | AGAGTAGAATACGTCCCTCCAGTCCTTTCAGCTAAGAATCGATTGTaGGGCATACCGGACTCATCCTGTTTAGACTCTTTCACAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: RVEYVPPVLSAKNRL*GIPDSSCLDSFTKC Trigger: ACATTTTGTGAAAGAGTCTAAACAGGATGAGTCCGGTATGCCCAACAATCGATTCTTAGCTGAAAGGACTGGAGGGACGTATTCTACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000617639.1 ENST00000632432.1 |
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