Pregenerated sensors for TRBC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000281981Ensembl transcript IDs: ENST00000632136.1, ENST00000633705.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTCCCCCTGGGTTAGGGAGATTTCAGCCGTGAGTGTGCAGGTGTaGATGCACATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RSPWVREISAVSVQV*MHIGGYLLGCREVR Trigger: TCTCACCTCTCTGCATCCCAATAGATATCCCCCTATGTGCATGCACACCTGCACACTCACGGCTGAAATCTCCCTAACCCAGGGGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| 3UTR TCA 90 bp | GTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTGTATTaGAACCATGACGGGTTAGAAGCTCCTAACTCCACTTCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VRAALQKRWQKKNVY*NHDGLEAPNSTSRA Trigger: AGCCCTGGAAGTGGAGTTAGGAGCTTCTAACCCGTCATGGTTTCAATACACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| 3UTR CCA 90 bp | GAACATTTTTATTGGTTTAGTCACTTAGGCATGCTAAGGTCCCCCTaGGTTAGGGAGATTTCAGCCGTGAGTGTGCAGGTGTGCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: EHFYWFSHLGMLRSP*VREISAVSVQVCMH Trigger: GTGCATGCACACCTGCACACTCACGGCTGAAATCTCCCTAACCCAGGGGGACCTTAGCATGCCTAAGTGACTAAACCAATAAAAATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| 3UTR-3UTR TCA 90 bp | CATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGAAGAAGAATGTGTATTaGAACCATGACGGGTTAGAA | + |
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Preference number: 2 (lower is better) Translates to: HRGISIGMQRGESSSSEAKKNVY*NHDGLE Trigger: TTCTAACCCGTCATGGTTTCAATACACATTCTTCTT...CGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGATATCCCCCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| 3UTR GCA 72 bp | TGGGTTAGGGAGATTTCAGCCGTGAGTGTGCAGGTGTaGATGCACATAGGGGGATATCTATTGGGATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: WVREISAVSVQV*MHIGGYLLGCR Trigger: TCTGCATCCCAATAGATATCCCCCTATGTGCATGCACACCTGCACACTCACGGCTGAAATCTCCCTAACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| 3UTR CCA 72 bp | TATTGGTTTAGTCACTTAGGCATGCTAAGGTCCCCCTaGGTTAGGGAGATTTCAGCCGTGAGTGTGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: YWFSHLGMLRSP*VREISAVSVQV Trigger: CACCTGCACACTCACGGCTGAAATCTCCCTAACCCAGGGGGACCTTAGCATGCCTAAGTGACTAAACCAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | GGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTTCAACACAAGGGCGCTaGCCAGCACAGCATACAGGG | + |
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Preference number: 4 (lower is better) Translates to: GMQRGESSSSEALAKEECSTQGR*PAQHTG Trigger: CCCTGTATGCTGTGCTGGTCAGCGCCCTTGTGTTGA...ACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | GCACATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAATCAACACAAGGGCGCTaGCCAGCACAGCATACAGGG | + |
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Preference number: 4 (lower is better) Translates to: AHRGISIGMQRGESSSSESTQGR*PAQHTG Trigger: CCCTGTATGCTGTGCTGGTCAGCGCCCTTGTGTTGA...TTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGATATCCCCCTATGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | GTGCATGCACATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTGGGATGCAGAGAGGTaGGAGCAGCTCTTCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VHAHRGISIGMQRGESSSWDAER*EQLFRS Trigger: GCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCA...AGAGCTGCTCTCACCTCTCTGCATCCCAATAGATATCCCCCTATGTGCATGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | TCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGGGAGATTTCAGCCGTaGGTGTGCAGGTGTGCATGC | + |
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Preference number: 4 (lower is better) Translates to: SIGMQRGESSSSEALAKEGRFQP*VCRCAC Trigger: GCATGCACACCTGCACACTCACGGCTGAAATCTCCC...TTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | TCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAATGGGATGCAGAGAGGTaGGAGCAGCTCTTCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIGMQRGESSSSEALAKEWDAER*EQLFRS Trigger: GCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCA...TTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | CAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTGTATTGGGGAGATTTCAGCCGTaGGTGTGCAGGTGTGCATGC | + |
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Preference number: 4 (lower is better) Translates to: QRGESSSSEALAKEECVLGRFQP*VCRCAC Trigger: GCATGCACACCTGCACACTCACGGCTGAAATCTCCC...CAATACACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CCA 90 bp | CTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGATGCTAAGGTCCCCCTaGGTTAGGGAGATTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGCREVRAALQKRWQKKMLRSP*VREISA Trigger: GGCTGAAATCTCCCTAACCCAGGGGGACCTTAGCAT...CTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CCA 90 bp | GGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTATGCTAAGGTCCCCCTaGGTTAGGGAGATTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GMQRGESSSSEALAKEECMLRSP*VREISA Trigger: GGCTGAAATCTCCCTAACCCAGGGGGACCTTAGCAT...ACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | CTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAGAAATCCTTTCTCTTaGCCATGGCCATCAACACAA | + |
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Preference number: 4 (lower is better) Translates to: LLGCREVRAALQKRWQKKRNPFS*PWPSTQ Trigger: TTGTGTTGATGGCCATGGTCAAGAGAAAGGATTTCT...CTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | GCACATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAAGAAATCCTTTCTCTTaGCCATGGCCATCAACACAA | + |
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Preference number: 4 (lower is better) Translates to: AHRGISIGMQRGESSSSERNPFS*PWPSTQ Trigger: TTGTGTTGATGGCCATGGTCAAGAGAAAGGATTTCT...TTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGATATCCCCCTATGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR TCA 90 bp | TCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAAAGAAGAATGTGTATTaGAACCATGACGGGTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIGMQRGESSSSEALAKEKKNVY*NHDGLE Trigger: TTCTAACCCGTCATGGTTTCAATACACATTCTTCTT...TTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CAA 90 bp | CATAGGGGGATATCTATTGGGATGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGATAGGGGGATATCTATaGGGATGCAGAGAGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: HRGISIGMQRGESSSSEAIGGYL*GCREVR Trigger: TCTCACCTCTCTGCATCCCAATAGATATCCCCCTAT...CGCTTCTGAAGAGCTGCTCTCACCTCTCTGCATCCCAATAGATATCCCCCTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CAA 90 bp | TGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTGTATATAGGGGGATATCTATaGGGATGCAGAGAGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CREVRAALQKRWQKKNVYIGGYL*GCREVR Trigger: TCTCACCTCTCTGCATCCCAATAGATATCCCCCTAT...ATACACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CAA 90 bp | TGCAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTGTATCAGAAATCCTTTCTCTaGACCATGGCCATCAACACA | + |
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Preference number: 5 (lower is better) Translates to: CREVRAALQKRWQKKNVYQKSFL*TMAINT Trigger: TGTGTTGATGGCCATGGTCAAGAGAAAGGATTTCTG...ATACACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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| CDS-3UTR CAA 90 bp | CAGAGAGGTGAGAGCAGCTCTTCAGAAGCGCTGGCAAAAGAAGAATGTGTATTGCAGAAATCCTTTCTCTaGACCATGGCCATCAACACA | + |
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Preference number: 5 (lower is better) Translates to: QRGESSSSEALAKEECVLQKSFL*TMAINT Trigger: TGTGTTGATGGCCATGGTCAAGAGAAAGGATTTCTG...CAATACACATTCTTCTTTTGCCAGCGCTTCTGAAGAGCTGCTCTCACCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000632136.1 ENST00000633705.1 |
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