Pregenerated sensors for TRAV41 (Homo sapiens)

Ensembl gene IDs: ENSG00000211820

Ensembl transcript IDs: ENST00000390468.1

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GAGCTGTGCTTTTCCTGTATGTTTATTGTGGCAATTAATCTTCCATaGTTCTTCTTCCCTGAGCTCAGCATAAACAAGGAAACAATGCCT	+
Preference number: 5 (lower is better) Translates to: ELCFSCMFIVAINLP*FFFPELSINKETMP Trigger: AGGCATTGTTTCCTTGTTTATGCTGAGCTCAGGGAAGAAGAAGCATGGAAGATTAATTGCCACAATAAACATACAGGAAAAGCACAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390468.1
CDS GCA 72 bp	CTCAGCATAAACAAGGAAACAATGCCTCCTCCTGGATaGTGTTGCAGCCAGTGTAAGGCACTTATTCCTACC	+
Preference number: 6 (lower is better) Translates to: LSINKETMPPPG*CCSQCKALIPT Trigger: GGTAGGAATAAGTGCCTTACACTGGCTGCAACAGCATCCAGGAGGAGGCATTGTTTCCTTGTTTATGCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390468.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu