Pregenerated sensors for TRAV40 (Homo sapiens)

Ensembl gene IDs: ENSG00000211819

Ensembl transcript IDs: ENST00000390467.3

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TATGTGCAGTTCATAGTCACAGATGCTCCCTCCGAGACGGTTATTTaGCCCGTCTGCTTGACTGAATTGCTGCTGGTTCCTCCAAACATT	+
Preference number: 5 (lower is better) Translates to: YVQFIVTDAPSETVI*PVCLTELLLVPPNI Trigger: AATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGTGACTATGAACTGCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS GCA 90 bp	TTCATAGTCACAGATGCTCCCTCCGAGACGGTTATTTGGCCCGTCTaGTTGACTGAATTGCTGCTGGTTCCTCCAAACATTAAGATCAGA	+
Preference number: 5 (lower is better) Translates to: FIVTDAPSETVIWPV*LTELLLVPPNIKIR Trigger: TCTGATCTTAATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGTGACTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS GCA 72 bp	CCCCGTGGATGTGTATGTGCAGTTCATAGTCACAGATaGTCCCTCCGAGACGGTTATTTGGCCCGTCTGCTT	+
Preference number: 6 (lower is better) Translates to: PRGCVCAVHSHR*SLRDGYLARLL Trigger: AAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGTGACTATGAACTGCACATACACATCCACGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS GCA 72 bp	ACAGATGCTCCCTCCGAGACGGTTATTTGGCCCGTCTaGTTGACTGAATTGCTGCTGGTTCCTCCAAACATT	+
Preference number: 6 (lower is better) Translates to: TDAPSETVIWPV*LTELLLVPPNI Trigger: AATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS CCA 72 bp	TTCATAGTCACAGATGCTCCCTCCGAGACGGTTATTTaGCCCGTCTGCTTGACTGAATTGCTGCTGGTTCCT	+
Preference number: 6 (lower is better) Translates to: FIVTDAPSETVI*PVCLTELLLVP Trigger: AGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGTGACTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS CAA 72 bp	GATGCTCCCTCCGAGACGGTTATTTGGCCCGTCTGCTaGACTGAATTGCTGCTGGTTCCTCCAAACATTAAG	+
Preference number: 6 (lower is better) Translates to: DAPSETVIWPVC*TELLLVPPNIK Trigger: CTTAATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS TCA 72 bp	ATGCTCCCTCCGAGACGGTTATTTGGCCCGTCTGCTTaGCTGAATTGCTGCTGGTTCCTCCAAACATTAAGA	+
Preference number: 6 (lower is better) Translates to: MLPPRRLFGPSA*LNCCWFLQTLR Trigger: TCTTAATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS CAA 90 bp	ATAGTCACAGATGCTCCCTCCGAGACGGTTATTTGGCCCGTCTGCTaGACTGAATTGCTGCTGGTTCCTCCAAACATTAAGATCAGAATT	+
Preference number: 6 (lower is better) Translates to: IVTDAPSETVIWPVC*TELLLVPPNIKIRI Trigger: AATTCTGATCTTAATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGAGGGAGCATCTGTGACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3
CDS CAA 72 bp	TCCGAGACGGTTATTTGGCCCGTCTGCTTGACTGAATaGCTGCTGGTTCCTCCAAACATTAAGATCAGAATT	+
Preference number: 6 (lower is better) Translates to: SETVIWPVCLTE*LLVPPNIKIRI Trigger: AATTCTGATCTTAATGTTTGGAGGAACCAGCAGCAATTCAGTCAAGCAGACGGGCCAAATAACCGTCTCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390467.3

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