Pregenerated sensors for TRAV4 (Homo sapiens)

Ensembl gene IDs: ENSG00000211778

Ensembl transcript IDs: ENST00000390426.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATAAACAGGGAGGCCACTTCGTTTGTAACTTTTGTCTTGTATCCTTaGATAATAAATCGTGGTCCTTGGCTGGGAAACTGTTGGTACCAC	+
Preference number: 5 (lower is better) Translates to: INREATSFVTFVLYP*IINRGPWLGNCWYH Trigger: GTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACAAACGAAGTGGCCTCCCTGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CCA 90 bp	CACTTCGTTTGTAACTTTTGTCTTGTATCCTTGAATAATAAATCGTaGTCCTTGGCTGGGAAACTGTTGGTACCACGTGATATAATCATT	+
Preference number: 5 (lower is better) Translates to: HFVCNFCLVSLNNKS*SLAGKLLVPRDIII Trigger: AATGATTATATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACAAACGAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CAA 90 bp	GATAAACAGGGAGGCCACTTCGTTTGTAACTTTTGTCTTGTATCCTaGAATAATAAATCGTGGTCCTTGGCTGGGAAACTGTTGGTACCA	+
Preference number: 6 (lower is better) Translates to: DKQGGHFVCNFCLVS*NNKSWSLAGKLLVP Trigger: TGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACAAACGAAGTGGCCTCCCTGTTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS TCA 72 bp	GAGGCCACTTCGTTTGTAACTTTTGTCTTGTATCCTTaGATAATAAATCGTGGTCCTTGGCTGGGAAACTGT	+
Preference number: 6 (lower is better) Translates to: EATSFVTFVLYP*IINRGPWLGNC Trigger: ACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACAAACGAAGTGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CAA 90 bp	CTTGTATCCTTGAATAATAAATCGTGGTCCTTGGCTGGGAAACTGTaGGTACCACGTGATATAATCATTTGTAGCAATGTTGTTGTGGCT	+
Preference number: 6 (lower is better) Translates to: LVSLNNKSWSLAGKL*VPRDIIICSNVVVA Trigger: AGCCACAACAACATTGCTACAAATGATTATATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CCA 72 bp	TGTAACTTTTGTCTTGTATCCTTGAATAATAAATCGTaGTCCTTGGCTGGGAAACTGTTGGTACCACGTGAT	+
Preference number: 6 (lower is better) Translates to: CNFCLVSLNNKS*SLAGKLLVPRD Trigger: ATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CAA 72 bp	TTTTGTCTTGTATCCTTGAATAATAAATCGTGGTCCTaGGCTGGGAAACTGTTGGTACCACGTGATATAATC	+
Preference number: 6 (lower is better) Translates to: FCLVSLNNKSWS*AGKLLVPRDII Trigger: GATTATATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CAA 90 bp	GTTTGTAACTTTTGTCTTGTATCCTTGAATAATAAATCGTGGTCCTaGGCTGGGAAACTGTTGGTACCACGTGATATAATCATTTGTAGC	+
Preference number: 6 (lower is better) Translates to: VCNFCLVSLNNKSWS*AGKLLVPRDIIICS Trigger: GCTACAAATGATTATATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAAGGATACAAGACAAAAGTTACAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390426.2
CDS CAA 72 bp	TTGAATAATAAATCGTGGTCCTTGGCTGGGAAACTGTaGGTACCACGTGATATAATCATTTGTAGCAATGTT	+
Preference number: 6 (lower is better) Translates to: LNNKSWSLAGKL*VPRDIIICSNV Trigger: AACATTGCTACAAATGATTATATCACGTGGTACCAACAGTTTCCCAGCCAAGGACCACGATTTATTATTCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390426.2

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