Pregenerated sensors for TRAV3 (Homo sapiens)

Ensembl gene IDs: ENSG00000211777

Ensembl transcript IDs: ENST00000390425.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTTTCCAGCCCACCTCTGCTGGAGATATGGCCCCACCCCAGAGAGTaGGCTCTTGAAGAGGAACCAGCAACCCTGTGTCAGCACAGGGCT	+
Preference number: 5 (lower is better) Translates to: LSSPPLLEIWPHPRE*ALEEEPATLCQHRA Trigger: AGCCCTGTGCTGACACAGGGTTGCTGGTTCCTCTTCAAGAGCCCACTCTCTGGGGTGGGGCCATATCTCCAGCAGAGGTGGGCTGGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS TCA 90 bp	CTGAATAGGTGCATTTCACAGTCAGAGGATTCCCTTCAGCAACGTTaGCCTGATCTTCCGGCTGAGCCACTGACTGAGCTCTCAGCCCAC	+
Preference number: 5 (lower is better) Translates to: LNRCISQSEDSLQQR*PDLPAEPLTELSAH Trigger: GTGGGCTGAGAGCTCAGTCAGTGGCTCAGCCGGAAGATCAGGTCAACGTTGCTGAAGGGAATCCTCTGACTGTGAAATGCACCTATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS CCA 72 bp	AGAGCATCGCAAGCATCGAGATGGGTGCAGAGGCCATaGCTCCAGCTAAGCTCACGGCGGGCGGGATTGGGG	+
Preference number: 6 (lower is better) Translates to: RASQASRWVQRP*LQLSSRRAGLG Trigger: CCCCAATCCCGCCCGCCGTGAGCTTAGCTGGAGCCATGGCCTCTGCACCCATCTCGATGCTTGCGATGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS CAA 90 bp	GGGCTCTTGAAGAGGAACCAGCAACCCTGTGTCAGCACAGGGCTTTaGGAAATGGCCCTTCCTCAGGGCACTGGTGCTTCCCGACACCGG	+
Preference number: 6 (lower is better) Translates to: GLLKRNQQPCVSTGL*EMALPQGTGASRHR Trigger: CCGGTGTCGGGAAGCACCAGTGCCCTGAGGAAGGGCCATTTCCAAAAGCCCTGTGCTGACACAGGGTTGCTGGTTCCTCTTCAAGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS CCA 72 bp	ACCAGCAACCCTGTGTCAGCACAGGGCTTTTGGAAATaGCCCTTCCTCAGGGCACTGGTGCTTCCCGACACC	+
Preference number: 6 (lower is better) Translates to: TSNPVSAQGFWK*PFLRALVLPDT Trigger: GGTGTCGGGAAGCACCAGTGCCCTGAGGAAGGGCCATTTCCAAAAGCCCTGTGCTGACACAGGGTTGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS CCA 72 bp	AGAGGAACCAGCAACCCTGTGTCAGCACAGGGCTTTTaGAAATGGCCCTTCCTCAGGGCACTGGTGCTTCCC	+
Preference number: 6 (lower is better) Translates to: RGTSNPVSAQGF*KWPFLRALVLP Trigger: GGGAAGCACCAGTGCCCTGAGGAAGGGCCATTTCCAAAAGCCCTGTGCTGACACAGGGTTGCTGGTTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS CAA 72 bp	AAGAGGAACCAGCAACCCTGTGTCAGCACAGGGCTTTaGGAAATGGCCCTTCCTCAGGGCACTGGTGCTTCC	+
Preference number: 6 (lower is better) Translates to: KRNQQPCVSTGL*EMALPQGTGAS Trigger: GGAAGCACCAGTGCCCTGAGGAAGGGCCATTTCCAAAAGCCCTGTGCTGACACAGGGTTGCTGGTTCCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390425.2
CDS TCA 72 bp	TGCATTTCACAGTCAGAGGATTCCCTTCAGCAACGTTaGCCTGATCTTCCGGCTGAGCCACTGACTGAGCTC	+
Preference number: 6 (lower is better) Translates to: CISQSEDSLQQR*PDLPAEPLTEL Trigger: GAGCTCAGTCAGTGGCTCAGCCGGAAGATCAGGTCAACGTTGCTGAAGGGAATCCTCTGACTGTGAAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390425.2

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