Pregenerated sensors for TRAV27 (Homo sapiens)

Ensembl gene IDs: ENSG00000211809

Ensembl transcript IDs: ENST00000390457.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TCTTTCTATCACATGGTGGACATGGCCCCTGACTTTAGCTGCTCCTaGAAGAGCCCGTCCTGGAACAGACTTCTCTGGGCTAGAAGAGTG	+
Preference number: 5 (lower is better) Translates to: SFYHMVDMAPDFSCS*KSPSWNRLLWARRV Trigger: CACTCTTCTAGCCCAGAGAAGTCTGTTCCAGGACGGGCTCTTTCAGGAGCAGCTAAAGTCAGGGGCCATGTCCACCATGTGATAGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2
CDS CCA 90 bp	TGGACACGGAGAATTTCAGGACCATCTTGTCTTTCTATCACATGGTaGACATGGCCCCTGACTTTAGCTGCTCCTGAAAGAGCCCGTCCT	+
Preference number: 5 (lower is better) Translates to: WTRRISGPSCLSITW*TWPLTLAAPERARP Trigger: AGGACGGGCTCTTTCAGGAGCAGCTAAAGTCAGGGGCCATGTCCACCATGTGATAGAAAGACAAGATGGTCCTGAAATTCTCCGTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2
CDS CCA 90 bp	GAATGGACACGGAGAATTTCAGGACCATCTTGTCTTTCTATCACATaGTGGACATGGCCCCTGACTTTAGCTGCTCCTGAAAGAGCCCGT	+
Preference number: 5 (lower is better) Translates to: EWTRRISGPSCLSIT*WTWPLTLAAPERAR Trigger: ACGGGCTCTTTCAGGAGCAGCTAAAGTCAGGGGCCATGTCCACCATGTGATAGAAAGACAAGATGGTCCTGAAATTCTCCGTGTCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2
CDS TCA 72 bp	CACATGGTGGACATGGCCCCTGACTTTAGCTGCTCCTaGAAGAGCCCGTCCTGGAACAGACTTCTCTGGGCT	+
Preference number: 6 (lower is better) Translates to: HMVDMAPDFSCS*KSPSWNRLLWA Trigger: AGCCCAGAGAAGTCTGTTCCAGGACGGGCTCTTTCAGGAGCAGCTAAAGTCAGGGGCCATGTCCACCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2
CDS CAA 72 bp	ATCCAAAGAATGGACACGGAGAATTTCAGGACCATCTaGTCTTTCTATCACATGGTGGACATGGCCCCTGAC	+
Preference number: 6 (lower is better) Translates to: IQRMDTENFRTI*SFYHMVDMAPD Trigger: GTCAGGGGCCATGTCCACCATGTGATAGAAAGACAAGATGGTCCTGAAATTCTCCGTGTCCATTCTTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2
CDS CCA 72 bp	AGAATTTCAGGACCATCTTGTCTTTCTATCACATGGTaGACATGGCCCCTGACTTTAGCTGCTCCTGAAAGA	+
Preference number: 6 (lower is better) Translates to: RISGPSCLSITW*TWPLTLAAPER Trigger: TCTTTCAGGAGCAGCTAAAGTCAGGGGCCATGTCCACCATGTGATAGAAAGACAAGATGGTCCTGAAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390457.2

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