Pregenerated sensors for TRAV26-1 (Homo sapiens)

Ensembl gene IDs: ENSG00000211807

Ensembl transcript IDs: ENST00000390455.3

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GAAACACAGTTACTCTTGCCACCAGCCTCATACTTCAAGGACAAATaGGGATTGTGGACCCAGAGTTCAGTTTTTGTGTCTGATTCTAGG	+
Preference number: 5 (lower is better) Translates to: ETQLLLPPASYFKDK*GLWTQSSVFVSDSR Trigger: CCTAGAATCAGACACAAAAACTGAACTCTGGGTCCACAATCCTCATTTGTCCTTGAAGTATGAGGCTGGTGGCAAGAGTAACTGTGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS GCA 90 bp	TCCAGAGAACAGAAGCAACAGCTACTAGTAAAGACTTGCAAGGAGTaGAGCTCTCATTGTGTTGTTGTCAGGATCTTGTCAGCCAATGAT	+
Preference number: 5 (lower is better) Translates to: SREQKQQLLVKTCKE*SSHCVVVRILSAND Trigger: ATCATTGGCTGACAAGATCCTGACAACAACACAATGAGAGCTGCACTCCTTGCAAGTCTTTACTAGTAGCTGTTGCTTCTGTTCTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS GCA 72 bp	ATTTCCACTGATGGTAGAGTGATTACAAGGCAGGTTTaGAGCTCTTCCTTCAGCGCAATCCATGGAGGTGGG	+
Preference number: 6 (lower is better) Translates to: ISTDGRVITRQV*SSSFSAIHGGG Trigger: CCCACCTCCATGGATTGCGCTGAAGGAAGAGCTGCAAACCTGCCTTGTAATCACTCTACCATCAGTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS CAA 90 bp	AAGACTTGCAAGGAGTGCAGCTCTCATTGTGTTGTTGTCAGGATCTaGTCAGCCAATGATAGAGCAGTTGCTTTTCTATGTCTTCCTCCC	+
Preference number: 6 (lower is better) Translates to: KTCKECSSHCVVVRI*SANDRAVAFLCLPP Trigger: GGGAGGAAGACATAGAAAAGCAACTGCTCTATCATTGGCTGACAAGATCCTGACAACAACACAATGAGAGCTGCACTCCTTGCAAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS GCA 72 bp	CAGAAGCAACAGCTACTAGTAAAGACTTGCAAGGAGTaGAGCTCTCATTGTGTTGTTGTCAGGATCTTGTCA	+
Preference number: 6 (lower is better) Translates to: QKQQLLVKTCKE*SSHCVVVRILS Trigger: TGACAAGATCCTGACAACAACACAATGAGAGCTGCACTCCTTGCAAGTCTTTACTAGTAGCTGTTGCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS CAA 90 bp	TTAAAGAATTTCCAGAGAACAGAAGCAACAGCTACTAGTAAAGACTaGCAAGGAGTGCAGCTCTCATTGTGTTGTTGTCAGGATCTTGTC	+
Preference number: 6 (lower is better) Translates to: LKNFQRTEATATSKD*QGVQLSLCCCQDLV Trigger: GACAAGATCCTGACAACAACACAATGAGAGCTGCACTCCTTGCAAGTCTTTACTAGTAGCTGTTGCTTCTGTTCTCTGGAAATTCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390455.3
CDS GCA 72 bp	AATTATAGTTCCAAAGGTCAGAAACACAGTTACTCTTaGCACCAGCCTCATACTTCAAGGACAAATGAGGAT	+
Preference number: 6 (lower is better) Translates to: NYSSKGQKHSYS*HQPHTSRTNED Trigger: ATCCTCATTTGTCCTTGAAGTATGAGGCTGGTGGCAAGAGTAACTGTGTTTCTGACCTTTGGAACTATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390455.3

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