Pregenerated sensors for TRAV18 (Homo sapiens)

Ensembl gene IDs: ENSG00000211798

Ensembl transcript IDs: ENST00000390446.3

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AATGTCAGAGCTGCCCTCTCAGGGAGGGTAACTGGGCCTTCTGTCTaGGTAACCGAGTCTCCACTGGTCCTTCTGAATATCAACAAGATC	+
Preference number: 5 (lower is better) Translates to: NVRAALSGRVTGPSV*VTESPLVLLNINKI Trigger: GATCTTGTTGATATTCAGAAGGACCAGTGGAGACTCGGTTACCCAGACAGAAGGCCCAGTTACCCTCCCTGAGAGGGCAGCTCTGACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390446.3
CDS TCA 90 bp	CGAGTCTCCACTGGTCCTTCTGAATATCAACAAGATCACAAGTCCTaGGCAGGAAGCAGACAGCATGGCTGGCTGAGAAGCAGTAGAAGG	+
Preference number: 5 (lower is better) Translates to: RVSTGPSEYQQDHKS*AGSRQHGWLRSSRR Trigger: CCTTCTACTGCTTCTCAGCCAGCCATGCTGTCTGCTTCCTGCTCAGGACTTGTGATCTTGTTGATATTCAGAAGGACCAGTGGAGACTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390446.3
CDS TCA 90 bp	AACAAGATCACAAGTCCTGAGCAGGAAGCAGACAGCATGGCTGGCTaGGAAGCAGTAGAAGGTTTTGTTGAGAGATATCCAAACCGAAAG	+
Preference number: 5 (lower is better) Translates to: NKITSPEQEADSMAG*EAVEGFVERYPNRK Trigger: CTTTCGGTTTGGATATCTCTCAACAAAACCTTCTACTGCTTCTCAGCCAGCCATGCTGTCTGCTTCCTGCTCAGGACTTGTGATCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390446.3
CDS TCA 90 bp	GGAAGCAGACAGCATGGCTGGCTGAGAAGCAGTAGAAGGTTTTGTTaGGAGATATCCAAACCGAAAGGTATATATATTTCTTTATGTTGT	+
Preference number: 5 (lower is better) Translates to: GSRQHGWLRSSRRFC*EISKPKGIYISLCC Trigger: ACAACATAAAGAAATATATATACCTTTCGGTTTGGATATCTCTCAACAAAACCTTCTACTGCTTCTCAGCCAGCCATGCTGTCTGCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390446.3
CDS GCA 72 bp	ACCAGAATAGAAAAGTTGAATAGCTGGACTGATAAGTaGAGTTTAATGTCAGAGCTGCCCTCTCAGGGAGGG	+
Preference number: 6 (lower is better) Translates to: TRIEKLNSWTDK*SLMSELPSQGG Trigger: CCCTCCCTGAGAGGGCAGCTCTGACATTAAACTGCACTTATCAGTCCAGCTATTCAACTTTTCTATTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000390446.3

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