Pregenerated sensors for TRAV16 (Homo sapiens)

Ensembl gene IDs: ENSG00000211796

Ensembl transcript IDs: ENST00000390444.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGCTCCACTGGGGCCCCTTTAAAGACAGAGAGGAGCTTCTCGGGCTaGGTCACTCTCTGGGCTCTTGTTCCTCTGAGTATAAATATTATC	+
Preference number: 5 (lower is better) Translates to: SSTGAPLKTERSFSG*VTLWALVPLSINII Trigger: GATAATATTTATACTCAGAGGAACAAGAGCCCAGAGAGTGACTCAGCCCGAGAAGCTCCTCTCTGTCTTTAAAGGGGCCCCAGTGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390444.1
CDS TCA 72 bp	GGGGCCCCTTTAAAGACAGAGAGGAGCTTCTCGGGCTaGGTCACTCTCTGGGCTCTTGTTCCTCTGAGTATA	+
Preference number: 6 (lower is better) Translates to: GAPLKTERSFSG*VTLWALVPLSI Trigger: TATACTCAGAGGAACAAGAGCCCAGAGAGTGACTCAGCCCGAGAAGCTCCTCTCTGTCTTTAAAGGGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000390444.1
CDS CAA 90 bp	AGGTGGAAAGATGTCTCGCCTTTGTTAAGGTCAGCAGTGAAGCCTTaGATGCTCTCTCTAGAGATGTGTCTCAAGAGTAACTGGAGGCGT	+
Preference number: 6 (lower is better) Translates to: RWKDVSPLLRSAVKP*MLSLEMCLKSNWRR Trigger: ACGCCTCCAGTTACTCTTGAGACACATCTCTAGAGAGAGCATCAAAGGCTTCACTGCTGACCTTAACAAAGGCGAGACATCTTTCCACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000390444.1

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