Pregenerated sensors for TRAT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163519Ensembl transcript IDs: ENST00000295756.11, ENST00000426646.1, ENST00000478830.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGATTTTCATGGCCTTACATTTGGCATGCATAAGTGTAAGCTGTaGATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TDFHGLTFGMHKCKL*IRGKPPSHQQMIRS Trigger: TGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTATTCACAGCTTACACTTATGCATGCCAAATGTAAGGCCATGAAAATCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| 3UTR-3UTR TCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGCATAAGTGTAAGCTGTaGATAAGAGGTAAGCCACCA | + |
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Preference number: 2 (lower is better) Translates to: FNQKFISIMGYCPLVRKEHKCKL*IRGKPP Trigger: TGGTGGCTTACCTCTTATTCACAGCTTACACTTATG...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| 3UTR-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGGCCTTACATTTGGCATaGATAAGTGTAAGCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FNQKFISIMGYCPLVRKEALHLA*ISVSCE Trigger: TTCACAGCTTACACTTATGCATGCCAAATGTAAGGC...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| 3UTR GCA 72 bp | CCACCATCCCATCAACAAATGATCAGGTCATCACCCTaGTGCCAAGTCCTTCTGTGTCCTCTGTGCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: PPSHQQMIRSSP*CQVLLCPLCIL Trigger: CAAGATGCACAGAGGACACAGAAGGACTTGGCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| 3UTR TCA 72 bp | CATGGCCTTACATTTGGCATGCATAAGTGTAAGCTGTaGATAAGAGGTAAGCCACCATCCCATCAACAAATG | + |
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Preference number: 3 (lower is better) Translates to: HGLTFGMHKCKL*IRGKPPSHQQM Trigger: CATTTGTTGATGGGATGGTGGCTTACCTCTTATTCACAGCTTACACTTATGCATGCCAAATGTAAGGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| 3UTR-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTTCATGGCCTTACATTaGGCATGCATAAGTGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: FNQKFISIMGYCPLVRKEFMALH*ACISVS Trigger: GCTTACACTTATGCATGCCAAATGTAAGGCCATGAA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCGGTTGCCTGTGCAGATaGGGTGGCTTCCTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCGCLCR*GGFLHL Trigger: AAGATGCAGGAAGCCACCCCATCTGCACAGGCAACC...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCAACGCTGTGATCAAGTaGGGCGTAGCACATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCNAVIK*GVAHLC Trigger: ACACAGATGTGCTACGCCTCACTTGATCACAGCGTT...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCACATCTGTGTTTCATTaGTTGCCTGTGCAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCTSVFH*LPVQMG Trigger: CCCCATCTGCACAGGCAACCAATGAAACACAGATGT...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCAATGTTTTCCTCTACTaGCTGGCTTTCTGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCNVFLY*LAFWGE Trigger: TTCTCCCCAGAAAGCCAGGCAGTAGAGGAAAACATT...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCCATAAGTGTAAGCTGTaGATAAGAGGTAAGCCACCA | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCHKCKL*IRGKPP Trigger: TGGTGGCTTACCTCTTATTCACAGCTTACACTTATG...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCGATGGGGTGGCTTCCTaGATCTTATTTACAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCDGVAS*ILFTDF Trigger: GAAATCTGTAAATAAGATGCAGGAAGCCACCCCATC...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCTCAATCCAAACAGTCTaGTGGGATCATCATGAATGT | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCSIQTV*WDHHEC Trigger: ACATTCATGATGATCCCATCAGACTGTTTGGATTGA...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCTCTATTGCATGTAGTTaGTCATCTCCATCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCSIACS*SSPSLS Trigger: AGACAAGGATGGAGATGAGCAACTACATGCAATAGA...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCGCCTTACATTTGGCATaGATAAGTGTAAGCTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCALHLA*ISVSCE Trigger: TTCACAGCTTACACTTATGCATGCCAAATGTAAGGC...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCCCAAGTGACTATCTCTaGCTAGTAGAATTCCTAAAC | + |
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Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCPSDYL*LVEFLN Trigger: GTTTAGGAATTCTACTAGCCAGAGATAGTCACTTGG...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCATTTACAGATTTCTCTaGTCGGGCTTTCATTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCIYRFL*SGFHLF Trigger: GAACAAATGAAAGCCCGACCAGAGAAATCTGTAAAT...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGGGTTGCCTGTGCAGATaGGGTGGCTTCCTGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKEGCLCR*GGFLHL Trigger: AAGATGCAGGAAGCCACCCCATCTGCACAGGCAACC...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTTCATTGGTTGCCTGTaGAGATGGGGTGGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKEFIGCL*RWGGFL Trigger: CAGGAAGCCACCCCATCTGCACAGGCAACCAATGAA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGCTGTGTTTCATTGGTTaGCTGTGCAGATGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKELCFIG*LCRWGG Trigger: GCCACCCCATCTGCACAGGCAACCAATGAAACACAG...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAGGTCATCACCCTGCTaGCAAGTCCTTCTGTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKERSSPC*QVLLCP Trigger: AGGACACAGAAGGACTTGGCAGCAGGGTGATGACCT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAACGCTGTGATCAAGTaGGGCGTAGCACATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKENAVIK*GVAHLC Trigger: ACACAGATGTGCTACGCCTCACTTGATCACAGCGTT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAATACTCATCAACCCTaGTGTGGTCACTGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKENTHQP*CGHWSS Trigger: GCTACTCCAGTGACCACACCAGGGTTGATGAGTATT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGCCTGTGCAGATGGGGTaGCTTCCTGCATCTTATTTA | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKEPVQMG*LPASYL Trigger: TAAATAAGATGCAGGAAGCCACCCCATCTGCACAGG...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGACATCTGTGTTTCATTaGTTGCCTGTGCAGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKETSVFH*LPVQMG Trigger: CCCCATCTGCACAGGCAACCAATGAAACACAGATGT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAATGTTTTCCTCTACTaGCTGGCTTTCTGGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKENVFLY*LAFWGE Trigger: TTCTCCCCAGAAAGCCAGGCAGTAGAGGAAAACATT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGCCCTGGTGTGGTCACTaGAGTAGCTGTACATTTTAT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKEPWCGH*SSCTFY Trigger: ATAAAATGTACAGCTACTCCAGTGACCACACCAGGG...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTCAATTATGGGCTATTaGCCATTGGTGAGAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKESIMGY*PLVRKE Trigger: CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTCAATCCAAACAGTCTaGTGGGATCATCATGAATGT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKESIQTV*WDHHEC Trigger: ACATTCATGATGATCCCATCAGACTGTTTGGATTGA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR GCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTCTATTGCATGTAGTTaGTCATCTCCATCCTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKESIACS*SSPSLS Trigger: AGACAAGGATGGAGATGAGCAACTACATGCAATAGA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR TCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAATATTGAAGATCAGTaGTATAACCAAAGCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKENIEDQ*YNQSQA Trigger: GGCTTGGCTTTGGTTATATCACTGATCTTCAATATT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295756.11 |
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| CDS-3UTR CCA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGATTTACAGATTTCTCTaGTCGGGCTTTCATTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FNQKFISIMGYCPLVRKEIYRFL*SGFHLF Trigger: GAACAAATGAAAGCCCGACCAGAGAAATCTGTAAAT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS TCA 90 bp | CTGTTTCCTGGGCTTTCTACGCTTCCCCTTAACGCTGTGATCAAGTaGGGCGTAGCACATCTGTGTTTCATTGGTTGCCTGTGCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: LFPGLSTLPLNAVIK*GVAHLCFIGCLCRW Trigger: CCATCTGCACAGGCAACCAATGAAACACAGATGTGCTACGCCTCACTTGATCACAGCGTTAAGGGGAAGCGTAGAAAGCCCAGGAAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCAAACGCTGGCATCTATaGCATGTAGTTGCTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCKRWHL*HVVAHL Trigger: GAGATGAGCAACTACATGCAATAGATGCCAGCGTTT...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS TCA 90 bp | GCATCTATTGCATGTAGTTGCTCATCTCCATCCTTGTCTGAGAAATaGGTATTCTGTTTCCTGGGCTTTCTACGCTTCCCCTTAACGCTG | + |
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Preference number: 5 (lower is better) Translates to: ASIACSCSSPSLSEK*VFCFLGFLRFPLTL Trigger: CAGCGTTAAGGGGAAGCGTAGAAAGCCCAGGAAACAGAATACTCATTTCTCAGACAAGGATGGAGATGAGCAACTACATGCAATAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCTTCATGGCCTTACATTaGGCATGCATAAGTGTAAGC | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCFMALH*ACISVS Trigger: GCTTACACTTATGCATGCCAAATGTAAGGCCATGAA...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCTTCAATTATGGGCTATaGCCCATTGGTGAGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCFNYGL*PIGEKG Trigger: TCCTTTCTCACCAATGGGCAATAGCCCATAATTGAA...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCCATTTTATCTTGTCGTaGCTTTTCCACATAGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCHFILS*LFHIVG Trigger: TCCCACTATGTGGAAAAGCAACGACAAGATAAAATG...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295756.11 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCTGGTCGGGCTTTCATTaGTTCATAGCAATTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCWSGFH*FIAIFI Trigger: GATGAAAATTGCTATGAACAAATGAAAGCCCGACCA...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS CCA 90 bp | CTGTGCAGATGGGGTGGCTTCCTGCATCTTATTTACAGATTTCTCTaGTCGGGCTTTCATTTGTTCATAGCAATTTTCATCCATTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LCRWGGFLHLIYRFL*SGFHLFIAIFIHWF Trigger: GAACCAATGGATGAAAATTGCTATGAACAAATGAAAGCCCGACCAGAGAAATCTGTAAATAAGATGCAGGAAGCCACCCCATCTGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | ATAAGAGGTAAGCCACCATCCCATCAACAAATGATCAGGTCATCACCCTGCTGCGCTGTACATTTTATCTaGTCGTTGCTTTTCCACATA | + |
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Preference number: 5 (lower is better) Translates to: IRGKPPSHQQMIRSSPCCAVHFI*SLLFHI Trigger: TATGTGGAAAAGCAACGACAAGATAAAATGTACAGC...GCAGCAGGGTGATGACCTGATCATTTGTTGATGGGATGGTGGCTTACCTCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295756.11 |
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| CDS-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTCTGTGTTTCATTGGTaGCCTGTGCAGATGGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: FNQKFISIMGYCPLVRKESVFHW*PVQMGW Trigger: CCACCCCATCTGCACAGGCAACCAATGAAACACAGA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGCACATCTGTGTTTCATaGGTTGCCTGTGCAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: FNQKFISIMGYCPLVRKEHICVS*VACADG Trigger: CCCATCTGCACAGGCAACCAATGAAACACAGATGTG...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGAAACGCTGGCATCTATaGCATGTAGTTGCTCATCTC | + |
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Preference number: 5 (lower is better) Translates to: FNQKFISIMGYCPLVRKEKRWHL*HVVAHL Trigger: GAGATGAGCAACTACATGCAATAGATGCCAGCGTTT...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTTCAATTATGGGCTATaGCCCATTGGTGAGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: FNQKFISIMGYCPLVRKEFNYGL*PIGEKG Trigger: TCCTTTCTCACCAATGGGCAATAGCCCATAATTGAA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS-3UTR CAA 90 bp | TTCAATCAGAAATTTATTTCAATTATGGGCTATTGCCCATTGGTGAGAAAGGAGTGGTCGGGCTTTCATTaGTTCATAGCAATTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: FNQKFISIMGYCPLVRKEWSGFH*FIAIFI Trigger: GATGAAAATTGCTATGAACAAATGAAAGCCCGACCA...CTCCTTTCTCACCAATGGGCAATAGCCCATAATTGAAATAAATTTCTGATTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS TCA 72 bp | GGGCTTTCTACGCTTCCCCTTAACGCTGTGATCAAGTaGGGCGTAGCACATCTGTGTTTCATTGGTTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLSTLPLNAVIK*GVAHLCFIGCL Trigger: CAGGCAACCAATGAAACACAGATGTGCTACGCCTCACTTGATCACAGCGTTAAGGGGAAGCGTAGAAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS GCA 72 bp | GTTTCATTGGTTGCCTGTGCAGATGGGGTGGCTTCCTaGATCTTATTTACAGATTTCTCTGGTCGGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VSLVACADGVAS*ILFTDFSGRAF Trigger: GAAAGCCCGACCAGAGAAATCTGTAAATAAGATGCAGGAAGCCACCCCATCTGCACAGGCAACCAATGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS CCA 72 bp | ACATCTGTGTTTCATTGGTTGCCTGTGCAGATGGGGTaGCTTCCTGCATCTTATTTACAGATTTCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TSVFHWLPVQMG*LPASYLQISLV Trigger: GACCAGAGAAATCTGTAAATAAGATGCAGGAAGCCACCCCATCTGCACAGGCAACCAATGAAACACAGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS CCA 72 bp | TGGGGTGGCTTCCTGCATCTTATTTACAGATTTCTCTaGTCGGGCTTTCATTTGTTCATAGCAATTTTCATC | + |
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Preference number: 6 (lower is better) Translates to: WGGFLHLIYRFL*SGFHLFIAIFI Trigger: GATGAAAATTGCTATGAACAAATGAAAGCCCGACCAGAGAAATCTGTAAATAAGATGCAGGAAGCCACCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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| CDS TCA 72 bp | TGTTACTTTTGCTTATTAGTTGGGAATCATGATCCATaGCTGAATCACAACATACCTGGTGTGGTCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: CYFCLLVGNHDP*LNHNIPGVVTG Trigger: TCCAGTGACCACACCAGGTATGTTGTGATTCAGTCATGGATCATGATTCCCAACTAATAAGCAAAAGTAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478830.1 |
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| CDS CAA 90 bp | TTTCATCCATTGGTTCTGAAATCATATCATCTAAGTTACCATAAATaGGTGTGTCTTCAATATAATACTCATCAACCCTGGTGTGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FHPLVLKSYHLSYHK*VCLQYNTHQPWCGH Trigger: GTGACCACACCAGGGTTGATGAGTATTATATTGAAGACACACCAATTTATGGTAACTTAGATGATATGATTTCAGAACCAATGGATGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295756.11 ENST00000426646.1 |
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