RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRARG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000184811

Ensembl transcript IDs: ENST00000333813.4, ENST00000626647.1

Found 390 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGCCTGTGCTGAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTaGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGT +
Preference number: 1 (lower is better)
Translates to: PRPVLSTAPPLRSGP*LGSPRACGTKHANS
Trigger: ACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTCAGCACAGGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp GGCCACGGCAGGACGAGAGCTCAGACCTCGGCCCTCCCCGCTGGCTaGCCTTGGCCAGGTCTGGTCCCAGGCTACAGCAGAAGTAGGAGG +
Preference number: 1 (lower is better)
Translates to: GHGRTRAQTSALPAG*PWPGLVPGYSRSRR
Trigger: CCTCCTACTTCTGCTGTAGCCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGGAGGGCCGAGGTCTGAGCTCTCGTCCTGCCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 90 bp TGGCTTTCTCCTCCAGGGCCCAAGCCCTTCTCCTGCTCTGTGCTCTaGGGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: WLSPPGPKPFSCSVL*GPPPPTHTSGASEL
Trigger: GAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCCGCAGAGCACAGAGCAGGAGAAGGGCTTGGGCCCTGGAGGAGAAAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 90 bp CAGAATGGCTTTCTCCTCCAGGGCCCAAGCCCTTCTCCTGCTCTGTaGTCTGCGGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTG +
Preference number: 1 (lower is better)
Translates to: QNGFLLQGPSPSPAL*SAGLRLLHTPRGPL
Trigger: CAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCCGCAGAGCACAGAGCAGGAGAAGGGCTTGGGCCCTGGAGGAGAAAGCCATTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp CCCTTCCCCGGGCCTCTGAGGAGGGTGGGGAGGCGAACAAGGGCCTaGAGAGGAGGCAGGAGGGTCCTGATGGGACAAAGGATGCTGACT +
Preference number: 1 (lower is better)
Translates to: PFPGPLRRVGRRTRA*RGGRRVLMGQRMLT
Trigger: AGTCAGCATCCTTTGTCCCATCAGGACCCTCCTGCCTCCTCTCCAGGCCCTTGTTCGCCTCCCCACCCTCCTCAGAGGCCCGGGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp CACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATaGCTTTCTCCTCCAGGGCCCAAGCCCTTCTCCTGCTCTGTGCTC +
Preference number: 1 (lower is better)
Translates to: HGLWGPSVQVPWCPE*LSPPGPKPFSCSVL
Trigger: GAGCACAGAGCAGGAGAAGGGCTTGGGCCCTGGAGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp CCGAAGCTGACAGGTGTGGGAAGAGGCGTGCGGGTCCTGCCATCCTaGTACCTGTCTTCACAGACACGCCTCTCGGCGCCACCACCTTGC +
Preference number: 1 (lower is better)
Translates to: PKLTGVGRGVRVLPS*YLSSQTRLSAPPPC
Trigger: GCAAGGTGGTGGCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGCCTCTTCCCACACCTGTCAGCTTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp GGGAGACATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTaGCAGGTGTGGGAAGAGGCGTGCGGGTCCTGCCATCCTGGTACC +
Preference number: 1 (lower is better)
Translates to: GRHPGTRVLERCFRS*QVWEEACGSCHPGT
Trigger: GGTACCAGGATGGCAGGACCCGCACGCCTCTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGATGTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 90 bp GGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTaGGTGGCCAGTTCCATCGACCTCGCCTCTCCCCTGTGTGACGTG +
Preference number: 1 (lower is better)
Translates to: GKTPTHHPSFQSQSL*VASSIDLASPLCDV
Trigger: CACGTCACACAGGGGAGAGGCGAGGTCGATGGAACTGGCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 90 bp CCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTaGCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCG +
Preference number: 1 (lower is better)
Translates to: PPPTHTSGASELCPW*PRKLSSYPRLPGRA
Trigger: CGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp TGTGCGTGGCCAGTTCCATCGACCTCGCCTCTCCCCTGTGTGACGTaGCTTCACGAGGGACAGAAATACTCCGTGCTCACACCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: CAWPVPSTSPLPCVT*LHEGQKYSVLTPSP
Trigger: GGGGGAGGGTGTGAGCACGGAGTATTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCGAGGTCGATGGAACTGGCCACGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp CCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTaGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGA +
Preference number: 1 (lower is better)
Translates to: PPPPTHTSGASELCP*CPRKLSSYPRLPGR
Trigger: TCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp GAGCCTGTGCGTGGCCAGTTCCATCGACCTCGCCTCTCCCCTGTGTaGCGTGACTTCACGAGGGACAGAAATACTCCGTGCTCACACCCT +
Preference number: 1 (lower is better)
Translates to: EPVRGQFHRPRLSPV*RDFTRDRNTPCSHP
Trigger: AGGGTGTGAGCACGGAGTATTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCGAGGTCGATGGAACTGGCCACGCACAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 90 bp TCTGTACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTaGAGACGGGGTCCTTCAGCTGAGCCCTTCCCTCGGTCTCAGGAC +
Preference number: 1 (lower is better)
Translates to: SVHASVFPNLVPRLS*RRGPSAEPFPRSQD
Trigger: GTCCTGAGACCGAGGGAAGGGCTCAGCTGAAGGACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp ACTCCGAGGGCACCTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTaGCAATCCCTCAACCATCGGTTCGTTTCTGTCCTCTCCCTGGGT +
Preference number: 1 (lower is better)
Translates to: TPRAPRVPSGVMFLP*QSLNHRFVSVLSLG
Trigger: ACCCAGGGAGAGGACAGAAACGAACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAGGTGCCCTCGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp GTGTGTGTGTGTAGGAGTGCACGGCAGAGCCTATTTGTGTGGGTGTaGGAAGGTCTGGGCATGTGTGGCACTCCGAGGGCACCTAGAGTC +
Preference number: 1 (lower is better)
Translates to: VCVCRSARQSLFVWV*EGLGMCGTPRAPRV
Trigger: GACTCTAGGTGCCCTCGGAGTGCCACACATGCCCAGACCTTCTCACACCCACACAAATAGGCTCTGCCGTGCACTCCTACACACACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp AGAAGTAGGAGGAAGAGGCAGACTGGCTTGTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTG +
Preference number: 1 (lower is better)
Translates to: RSRRKRQTGLSWETS*DQSPREMLPKLTGV
Trigger: CACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTCCTACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 90 bp CCTGGCAGTTTTCGCTGCTTGGTGGAACCCAGGAAATTGTGGGAATaGGAAACAAGCCAGACTGCTGGGGTTGAGATCCCAGGACGCGTC +
Preference number: 1 (lower is better)
Translates to: PGSFRCLVEPRKLWE*ETSQTAGVEIPGRV
Trigger: GACGCGTCCTGGGATCTCAACCCCAGCAGTCTGGCTTGTTTCTCATTCCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp TTGAGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTaGGTTCGCTGTGCTTTCCTTCCTCGCTCCAGGCTTTCTTGTCAG +
Preference number: 1 (lower is better)
Translates to: LRSQDASGRVNHVTH*VRCAFLPRSRLSCQ
Trigger: CTGACAAGAAAGCCTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 90 bp TACTCCGTGCTCACACCCTCCCCCAGCAAACAGGAGCATCTGTTTTaGTCTCAAAGATCCCATAAAGCAAACCCAACCAGTCCCTTCTGT +
Preference number: 1 (lower is better)
Translates to: YSVLTPSPSKQEHLF*SQRSHKANPTSPFC
Trigger: ACAGAAGGGACTGGTTGGGTTTGCTTTATGGGATCTTTGAGACCAAAACAGATGCTCCTGTTTGCTGGGGGAGGGTGTGAGCACGGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCTCGGCCCTCCCCGCTaGCTGACCTTGGCCAGGTCT +
Preference number: 2 (lower is better)
Translates to: GPPPPTHTSGASELCPWCLGPPR*LTLARS
Trigger: AGACCTGGCCAAGGTCAGCCAGCGGGGAGGGCCGAG...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGAGCCCTCCCCGCTGGCTaGCCTTGGCCAGGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGALPAG*PWPGLV
Trigger: GACCAGACCTGGCCAAGGTCAGCCAGCGGGGAGGGC...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCTCCCCAGGTGGGGACTaGCGTAGGAACACCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GPPPPTHTSGASELCPWCSPGGD*RRNTSP
Trigger: GGGGCTGGTGTTCCTACGTCAGTCCCCACCTGGGGA...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGCACAGCTCCGCCTCTaGGCTCGGGGCCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCAQLRL*ARGPGW
Trigger: CCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCGGGACAGGGGATGCTTaGCAGTCAGCACCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GPPPPTHTSGASELCPWCGTGDA*QSAPWP
Trigger: AGGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCC...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGACCAGACTGCTGGGGTTaGGATCCCAGGACGCGTCCG +
Preference number: 2 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGPDCWG*DPRTRP
Trigger: CGGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGG...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGATCTGACCCACGCCCTTaGAGGTGGCGCAAACGCCCC +
Preference number: 2 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGSDPRP*RWRKRP
Trigger: GGGGCGTTTGCGCCACCTGCAAGGGCGTGGGTCAGA...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGCTCGGGGCCCTGGCTaGGATCACCGCGGGCGTGTG +
Preference number: 2 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRARGPG*DHRGRV
Trigger: CACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTGGCCTCCCGCGGTGTaGAGGTCAGAGCTCTCCCGA +
Preference number: 2 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPWPPAV*RSELSR
Trigger: TCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCTCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLSELSR*PGPASA
Trigger: AGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGA...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGCCGAGGGCCCCACTTaGCTCCTTTCGGGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVAAEGPT*LLSGVP
Trigger: TGGGACCCCCGAAAGGAGCCAAGTGGGGCCCTCGGC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCGAGGTCTCCAGGGCCTaGGAGCTGCGGTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGEVSRA*ELRSGG
Trigger: CCCTCCTGACCGCAGCTCCCAGGCCCTGGAGACCTC...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACCATTGGGTTCGCTGTaGTTTCCTTCCTCGCTCCAG +
Preference number: 2 (lower is better)
Translates to: ALGALAGITAGVWHEACKPLGSL*FPSSLQ
Trigger: CTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGG...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTACGGAGCCCCAAGCTTaGACCCCAGGCCATCGCGGG +
Preference number: 2 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPTEPQA*TPGHRG
Trigger: CCCGCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGT...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGGCTCGGGGCCCTGGCTaGGATCACCGCGGGCGTGTG +
Preference number: 2 (lower is better)
Translates to: ILGPESSRDASEADRCGKARGPG*DHRGRV
Trigger: CACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGC...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCGTGTATTCCCAAACCTaGTCCCCCGACTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: GPPPPTHTSGASELCPWCVYSQT*SPDSPA
Trigger: TGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACAC...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGAGATGCTTCCGAAGCTaGCAGGTGTGGGAAGAGGCG +
Preference number: 2 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGRCFRS*QVWEEA
Trigger: CGCCTCTTCCCACACCTGTCAGCTTCGGAAGCATCT...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGACAGGAAGGAGCTCTaGTGCGTCTCTCCCCGCCAG +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVADRKEL*CVSPRQ
Trigger: CTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCTGTC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGCCCTGGCTGTGCTGTaGCCATTCCAGGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVAALAVL*PFQGHL
Trigger: CAGATGCCCCTGGAATGGGCACAGCACAGCCAGGGC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCAGACTGCTGGGGTTaGGATCCCAGGACGCGTCCG +
Preference number: 2 (lower is better)
Translates to: AGITAGVWHEACKQSILSPDCWG*DPRTRP
Trigger: CGGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGG...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGTGGCGCAAACGCCCCTaGCAGCCTGGGACCCTTTGG +
Preference number: 2 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPWRKRP*QPGTLW
Trigger: CCAAAGGGTCCCAGGCTGTCAGGGGCGTTTGCGCCA...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGACTCCCCTGTGTGACGTaGCTTCACGAGGGACAGAAA +
Preference number: 2 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGLPCVT*LHEGQK
Trigger: TTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAG...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGCACAGCTCCGCCTCTaGGCTCGGGGCCCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAAQLRL*ARGPGW
Trigger: CCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGC...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCGTCCCCCGACTCTCCTaGAGACGGGGTCCTTCAGCT +
Preference number: 2 (lower is better)
Translates to: LWDTGRGWVSALSRATVFVPRLS*RRGPSA
Trigger: AGCTGAAGGACCCCGTCTGCAGGAGAGTCGGGGGAC...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGAGACAGAAATACTCCGTaGTCACACCCTCCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGDRNTP*SHPPPA
Trigger: TGCTGGGGGAGGGTGTGAGCACGGAGTATTTCTGTC...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAG +
Preference number: 2 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPSWETS*DQSPRE
Trigger: CTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCCCTGTGGCTGGAGCCTaGGCCAGGGAGAAGTGTAGG +
Preference number: 2 (lower is better)
Translates to: LWDTGRGWVSALSRATVFPVAGA*AREKCR
Trigger: CCTACACTTCTCCCTGGCCCAGGCTCCAGCCACAGG...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCGCGGAGGATGTTAAGTaGGGCAGTTGCCTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGAEDVK*GSCLLP
Trigger: GGGAAGGAGGCAACTGCCTCACTTAACATCCTCCGC...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCTGGCCTCCCGCGGTGTaGAGGTCAGAGCTCTCCCGA +
Preference number: 2 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVWPPAV*RSELSR
Trigger: TCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCA...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGAAGGAGCTCTGCTaGGTCTCTCCCCGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPRKELC*VSPRQR
Trigger: ACGCTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCT...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGAGGCGTGCGGGTCCTaGCATCCTGGTACCTGTCTT +
Preference number: 2 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGREACGS*HPGTCL
Trigger: AAGACAGGTACCAGGATGGCAGGACCCGCACGCCTC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCAACCACGTTACCCATTaGGTTCGCTGTGCTTTCCTT +
Preference number: 2 (lower is better)
Translates to: GPPPPTHTSGASELCPWCNHVTH*VRCAFL
Trigger: AAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTT...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGAGGAAGAGGCAGACTaGCTTGTCCTGGGAGACATC +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLEEEAD*LVLGDI
Trigger: GATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGACCTTGGCCAGGTCTaGTCCCAGGCTACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVADLGQV*SQATAE
Trigger: TTCTGCTGTAGCCTGGGACCAGACCTGGCCAAGGTC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCACGCCCCTGACAGCCTaGGACCCTTTGGGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: VPGALGNSQVILACLEERTPLTA*DPLGSP
Trigger: GGGACTTCCCAAAGGGTCCCAGGCTGTCAGGGGCGT...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGTGTATTCCCAAACCTaGTCCCCCGACTCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLVYSQT*SPDSPA
Trigger: TGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACAC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCAGGCGAACAAGGGCCTaGAGAGGAGGCAGGAGGGTC +
Preference number: 2 (lower is better)
Translates to: VPGALGNSQVILACLEERRRTRA*RGGRRV
Trigger: GACCCTCCTGCCTCCTCTCCAGGCCCTTGTTCGCCT...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCTTTCTGTCCTCTCCCTaGGTTGCTGAGGCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLFLSSP*VAEAED
Trigger: GTCCTCAGCCTCAGCAACCCAGGGAGAGGACAGAAA...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 90 bp ATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCCACCACCTaGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: ILVPVFTDTPLGATT*QRRMLSEAVASFPG
Trigger: TCCCGGGAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGGGACAGGGGATGCTTaGCAGTCAGCACCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCGTGDA*QSAPWP
Trigger: AGGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCC...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTCCTGGCAGTTTTCGCTaGTTGGTGGAACCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPPGSFR*LVEPRK
Trigger: TTTCCTGGGTTCCACCAAGCAGCGAAAACTGCCAGG...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGGGGGCCCCACGTCTTTaGTCCGAGTCCACAGACAGG +
Preference number: 2 (lower is better)
Translates to: ILGPESSRDASEADRCGKGAPRL*SESTDR
Trigger: CCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCC...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGAGGAAGAGGCAGACTaGCTTGTCCTGGGAGACATC +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVAEEEAD*LVLGDI
Trigger: GATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCATGAGCAGGAGAGGCTaGAGTTTATTCCCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLMSRRG*SLFPRW
Trigger: CCACCTGGGGAATAAACTCCAGCCTCTCCTGCTCAT...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCTGGCTGTGGCTGTCCTaGGTTCTGAGTGTGAACAAG +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLWLWLS*VLSVNK
Trigger: CTTGTTCACACTCAGAACCCAGGACAGCCACAGCCA...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGCTTCCCCTAAGCGGTaGCTGTGGCTGTCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: VPGALGNSQVILACLEERASPKR*LWLSWV
Trigger: AACCCAGGACAGCCACAGCCACCGCTTAGGGGAAGC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGTCCGTCCAGGTCCCCTaGTGTCCAGAATGGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVASVQVP*CPEWLS
Trigger: AGAAAGCCATTCTGGACACCAGGGGACCTGGACGGA...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCTTGGGGACAGGGGATaGTTGACAGTCAGCACCCTG +
Preference number: 2 (lower is better)
Translates to: AGITAGVWHEACKQSILSLGDRG*LTVSTL
Trigger: CAGGGTGCTGACTGTCAAGCATCCCCTGTCCCCAAG...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCATCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: QDGQTTDPHKNSLTHALASELSR*PGPASA
Trigger: AGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGA...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCCGGGTCCTGCCATCCTaGTACCTGTCTTCACAGACA +
Preference number: 2 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRRVLPS*YLSSQT
Trigger: TGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCG...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCACGCCCCTGACAGCCTaGGACCCTTTGGGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGTPLTA*DPLGSP
Trigger: GGGACTTCCCAAAGGGTCCCAGGCTGTCAGGGGCGT...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCAGGAAATTGTGGGAATaGGAAACAAGCCAGACTGCT +
Preference number: 2 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRRKLWE*ETSQTA
Trigger: AGCAGTCTGGCTTGTTTCTCATTCCCACAATTTCCT...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR TCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCGCTGGGCTGGAAGCCTaGAACTACCTAAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVAGLEA*NYLSST
Trigger: GGTGCTGCTTAGGTAGTTTCAGGCTTCCAGCCCAGC...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGTCCAGGGAAGGCCTCTaGTGTTTGTGGATGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRSREGL*CLWMAR
Trigger: CCTGGCCATCCACAAACAGCAGAGGCCTTCCCTGGA...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGCAGTTTTCGCTGCTTaGTGGAACCCAGGAAATTGT +
Preference number: 2 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLAVFAA*WNPGNC
Trigger: ACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAG +
Preference number: 2 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVSWETS*DQSPRE
Trigger: CTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGA...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCTGTGCTTTTGGAACTTaGGGACAGGGGATGCTTGAC +
Preference number: 2 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRCAFGT*GQGMLD
Trigger: GTCAAGCATCCCCTGTCCCCAAGTTCCAAAAGCACA...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCGTTTTCGCTGCTTGGTaGAACCCAGGAAATTGTGGG +
Preference number: 2 (lower is better)
Translates to: LWDTGRGWVSALSRATVFVFAAW*NPGNCG
Trigger: CCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAAC...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCGCAGTTTTCGCTGCTTaGTGGAACCCAGGAAATTGT +
Preference number: 2 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGAVFAA*WNPGNC
Trigger: ACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGC...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTATCACCGCGGGCGTGTaGCACGAAGCATGCAAACAG +
Preference number: 2 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGITAGV*HEACKQ
Trigger: CTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGAT...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 90 bp GTTGAGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATaGGGTTCGCTGTGCTTTCCTTCCTCGCTCCAGGCTTTCTTGTCA +
Preference number: 2 (lower is better)
Translates to: VEIPGRVRESKPRYP*GSLCFPSSLQAFLS
Trigger: TGACAAGAAAGCCTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCCCTGGCAGTTTTCGCTaGTTGGTGGAACCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVPGSFR*LVEPRK
Trigger: TTTCCTGGGTTCCACCAAGCAGCGAAAACTGCCAGG...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGACCTTGGCCAGGTCTaGTCCCAGGCTACAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QDGQTTDPHKNSLTHALADLGQV*SQATAE
Trigger: TTCTGCTGTAGCCTGGGACCAGACCTGGCCAAGGTC...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR GCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCTTCCCTTTGAGTCTGTaGTTTTGGAACTTGGGGACA +
Preference number: 2 (lower is better)
Translates to: GSPRACGTKHANSPFFPRFPLSL*FWNLGT
Trigger: TGTCCCCAAGTTCCAAAAGCACAGACTCAAAGGGAA...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTTGTGCTTTTGGAACTTaGGGACAGGGGATGCTTGAC +
Preference number: 2 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCCAFGT*GQGMLD
Trigger: GTCAAGCATCCCCTGTCCCCAAGTTCCAAAAGCACA...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGGTTTTCGCTGCTTGGTaGAACCCAGGAAATTGTGGG +
Preference number: 2 (lower is better)
Translates to: ILGPESSRDASEADRCGKVFAAW*NPGNCG
Trigger: CCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAAC...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTTCCTCATTCATCCTaGCAGTTTTCGCTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPFPHSS*QFSLLG
Trigger: ACCAAGCAGCGAAAACTGCCAGGATGAATGAGGAAA...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 90 bp AACCCAGGAAATTGTGGGAATGAGAAACAAGCCAGACTGCTGGGGTaGAGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCAT +
Preference number: 2 (lower is better)
Translates to: NPGNCGNEKQARLLG*RSQDASGRVNHVTH
Trigger: ATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGGCTTGTTTCTCATTCCCACAATTTCCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGCAGGAGCATCTGTTTTaGTCTCAAAGATCCCATAAA +
Preference number: 2 (lower is better)
Translates to: GRGWVSALSRATVFMQVAQEHLF*SQRSHK
Trigger: TTTATGGGATCTTTGAGACCAAAACAGATGCTCCTG...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp TGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCTAGCCCAGCTCCCTGC +
Preference number: 3 (lower is better)
Translates to: WPPAVCRSELSR*PGPASASPAPC
Trigger: GCAGGGAGCTGGGCTAGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp GTGCTGAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTaGCTGGGATCACCGCGGGCGTGTGGCACGAAGCAT +
Preference number: 3 (lower is better)
Translates to: VLSTAPPLRSGP*LGSPRACGTKH
Trigger: ATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTCAGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCGGGGACAGGGGATGCTaGACAGTCAGCACCCTGGCC +
Preference number: 3 (lower is better)
Translates to: GPPPPTHTSGASELCPWCGDRGC*TVSTLA
Trigger: GGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCCC...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGACCCCGCTGGCTGACCTaGGCCAGGTCTGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGPRWLT*ARSGPR
Trigger: CCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGG...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp CGGCAGGACGAGAGCTCAGACCTCGGCCCTCCCCGCTaGCTGACCTTGGCCAGGTCTGGTCCCAGGCTACAG +
Preference number: 3 (lower is better)
Translates to: RQDESSDLGPPR*LTLARSGPRLQ
Trigger: CTGTAGCCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGGAGGGCCGAGGTCTGAGCTCTCGTCCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp GGGCACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTaGTGTCCAGAATGGCTTTCTCCTCCAGGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: GHGLWGPSVQVP*CPEWLSPPGPK
Trigger: CTTGGGCCCTGGAGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGGGCAGTTTTCGCTGCTaGGTGGAACCCAGGAAATTG +
Preference number: 3 (lower is better)
Translates to: EHSSASALGALAGITAGVGSFRC*VEPRKL
Trigger: CAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCC...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGATGTCCTCTCCCTGGGTaGCTGAGGCTGAGGACCCCG +
Preference number: 3 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGCPLPG*LRLRTP
Trigger: CGGGGTCCTCAGCCTCAGCAACCCAGGGAGAGGACA...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCTGGGGCCCCACGTCTTaGCTCCGAGTCCACAGACAG +
Preference number: 3 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRWGPTS*LRVHRQ
Trigger: CTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCCA...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCCCCCGCTGGCTGACCTaGGCCAGGTCTGGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRPRWLT*ARSGPR
Trigger: CCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGG...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCTGTCCTCTCCCTGGGTaGCTGAGGCTGAGGACCCCG +
Preference number: 3 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLCPLPG*LRLRTP
Trigger: CGGGGTCCTCAGCCTCAGCAACCCAGGGAGAGGACA...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 72 bp TCTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTaGGGCAGTTGCCTCCTTCCCGGGAGCTGCACCCCC +
Preference number: 3 (lower is better)
Translates to: SRRHHLAAEDVK*GSCLLPGSCTP
Trigger: GGGGGTGCAGCTCCCGGGAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp GGGCCCCTCCCTGTAGACAGAACCTCTGTACTGACCTaGTCTTCCCTTCCCCGGGCCTCTGAGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: GPLPVDRTSVLT*SSLPRASEEGG
Trigger: CCCACCCTCCTCAGAGGCCCGGGGAAGGGAAGAGCAGGTCAGTACAGAGGTTCTGTCTACAGGGAGGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp AATCCCTCAACCATCGGTTCGTTTCTGTCCTCTCCCTaGGTTGCTGAGGCTGAGGACCCCGGGGGCCTGCCG +
Preference number: 3 (lower is better)
Translates to: NPSTIGSFLSSP*VAEAEDPGGLP
Trigger: CGGCAGGCCCCCGGGGTCCTCAGCCTCAGCAACCCAGGGAGAGGACAGAAACGAACCGATGGTTGAGGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCTGGGGCCCCACGTCTTaGCTCCGAGTCCACAGACAG +
Preference number: 3 (lower is better)
Translates to: GSPRACGTKHANSPFFPRWGPTS*LRVHRQ
Trigger: CTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCCA...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 72 bp CCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTaGCAGGTGTGGGAAGAGGCGTGCGGGTCCTGCCAT +
Preference number: 3 (lower is better)
Translates to: PGTRVLERCFRS*QVWEEACGSCH
Trigger: ATGGCAGGACCCGCACGCCTCTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp GCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTaGAGACGGGGTCCTTCAGCTGAGCCCTTCCCTCGG +
Preference number: 3 (lower is better)
Translates to: ASVFPNLVPRLS*RRGPSAEPFPR
Trigger: CCGAGGGAAGGGCTCAGCTGAAGGACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp GAGAGGCCGTGGCGTCCAGGCCCCAGGCTCTGTACATaGAAGTGTATTCCCAAACCTGGTCCCCCGACTCTC +
Preference number: 3 (lower is better)
Translates to: ERPWRPGPRLCT*KCIPKPGPPTL
Trigger: GAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTACAGAGCCTGGGGCCTGGACGCCACGGCCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp AGTTATCCTCGCCTGCCTGGAAGAGCGCCCTGGCTGTaGTGTGCCCATTCCAGGGGCATCTGCAGTGGCTTC +
Preference number: 3 (lower is better)
Translates to: SYPRLPGRAPWL*CAHSRGICSGF
Trigger: GAAGCCACTGCAGATGCCCCTGGAATGGGCACAGCACAGCCAGGGCGCTCTTCCAGGCAGGCGAGGATAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp CTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTaGCCAGTTCCATCGACCTCGCCTCTCCCCTGTGTG +
Preference number: 3 (lower is better)
Translates to: LIIPPSRARACA*PVPSTSPLPCV
Trigger: CACACAGGGGAGAGGCGAGGTCGATGGAACTGGCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGGGGACAGGGGATGCTaGACAGTCAGCACCCTGGCC +
Preference number: 3 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCGDRGC*TVSTLA
Trigger: GGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCCC...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCAAGAGGCAGACTGGCTaGTCCTGGGAGACATCCTGG +
Preference number: 3 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGKRQTG*SWETSW
Trigger: CCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTT...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp CGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTaGTGCGTCTCTCCCCGCCAGCGTGTGTCTCGTTTG +
Preference number: 3 (lower is better)
Translates to: RLCSESTDRKEL*CVSPRQRVSRL
Trigger: CAAACGAGACACACGCTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCTTTGAGTCTGTGCTTTaGGAACTTGGGGACAGGGGA +
Preference number: 3 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRFESVL*ELGDRG
Trigger: TCCCCTGTCCCCAAGTTCCAAAAGCACAGACTCAAA...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTGCCAGACTGCTGGGGTaGAGATCCCAGGACGCGTCC +
Preference number: 3 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGARLLG*RSQDAS
Trigger: GGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGGC...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGGAAGGCCTCTGCTGTTaGTGGATGGCCAGGGGCCCA +
Preference number: 3 (lower is better)
Translates to: PGPGRSVGKIMGLERRKREGLCC*WMARGP
Trigger: TGGGCCCCTGGCCATCCACAAACAGCAGAGGCCTTC...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 72 bp CGTGGCCAGTTCCATCGACCTCGCCTCTCCCCTGTGTaGCGTGACTTCACGAGGGACAGAAATACTCCGTGC +
Preference number: 3 (lower is better)
Translates to: RGQFHRPRLSPV*RDFTRDRNTPC
Trigger: GCACGGAGTATTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCGAGGTCGATGGAACTGGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp ACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTaGCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: THTSGASELCPW*PRKLSSYPRLP
Trigger: AGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp CCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTaGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTG +
Preference number: 3 (lower is better)
Translates to: PTHTSGASELCP*CPRKLSSYPRL
Trigger: CAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGCTCGGCGCCACCACCTaGCAGCGGAGGATGTTAAGT +
Preference number: 3 (lower is better)
Translates to: ILGPESSRDASEADRCGKLGATT*QRRMLS
Trigger: ACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCCACGGCAGAGCCTATTaGTGTGGGTGTGAGAAGGTC +
Preference number: 3 (lower is better)
Translates to: LWDTGRGWVSALSRATVFHGRAY*CGCEKV
Trigger: GACCTTCTCACACCCACACAAATAGGCTCTGCCGTG...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGGCAGTTTTCGCTGCTaGGTGGAACCCAGGAAATTG +
Preference number: 3 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRGSFRC*VEPRKL
Trigger: CAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp CTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATaGAAACAGTCCATTCTTTCCCCGCTTGAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: LAGITAGVWHEA*KQSILSPLEEN
Trigger: GTTTTCCTCAAGCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp CAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTaGGTTCGCTGTGCTTTCCTTCCTCGCTCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: QDASGRVNHVTH*VRCAFLPRSRL
Trigger: AAGCCTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp AGGAAGAGGCAGACTGGCTTGTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTG +
Preference number: 3 (lower is better)
Translates to: RKRQTGLSWETS*DQSPREMLPKL
Trigger: CAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp ATTCCAGGGGCATCTGCAGTGGCTTCCCCTAAGCGGTaGCTGTGGCTGTCCTGGGTTCTGAGTGTGAACAAG +
Preference number: 3 (lower is better)
Translates to: IPGASAVASPKR*LWLSWVLSVNK
Trigger: CTTGTTCACACTCAGAACCCAGGACAGCCACAGCCACCGCTTAGGGGAAGCCACTGCAGATGCCCCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCAAACCACGTTACCCATaGGGTTCGCTGTGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRKPRYP*GSLCFP
Trigger: AGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTT...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 72 bp CCAGTTCCATCGACCTCGCCTCTCCCCTGTGTGACGTaGCTTCACGAGGGACAGAAATACTCCGTGCTCACA +
Preference number: 3 (lower is better)
Translates to: PVPSTSPLPCVT*LHEGQKYSVLT
Trigger: TGTGAGCACGGAGTATTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCGAGGTCGATGGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR TCA 72 bp GCACCTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTaGCAATCCCTCAACCATCGGTTCGTTTCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: APRVPSGVMFLP*QSLNHRFVSVL
Trigger: GAGGACAGAAACGAACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR-3UTR CAA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTTTTGAGTCTGTGCTTTaGGAACTTGGGGACAGGGGA +
Preference number: 3 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPFESVL*ELGDRG
Trigger: TCCCCTGTCCCCAAGTTCCAAAAGCACAGACTCAAA...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR GCA 72 bp CGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTaGTTTCCTTCCTCGCTCCAGGCTTTCTTGTCAGAT +
Preference number: 3 (lower is better)
Translates to: RESKPRYPLGSL*FPSSLQAFLSD
Trigger: ATCTGACAAGAAAGCCTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp CTCACACCCTCCCCCAGCAAACAGGAGCATCTGTTTTaGTCTCAAAGATCCCATAAAGCAAACCCAACCAGT +
Preference number: 3 (lower is better)
Translates to: LTPSPSKQEHLF*SQRSHKANPTS
Trigger: ACTGGTTGGGTTTGCTTTATGGGATCTTTGAGACCAAAACAGATGCTCCTGTTTGCTGGGGGAGGGTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CCA 72 bp TTTTCCTCATTCATCCTGGCAGTTTTCGCTGCTTGGTaGAACCCAGGAAATTGTGGGAATGAGAAACAAGCC +
Preference number: 3 (lower is better)
Translates to: FSSFILAVFAAW*NPGNCGNEKQA
Trigger: GGCTTGTTTCTCATTCCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCCAGGATGAATGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGGGGGCCCCACGTCTTTaGTCCGAGTCCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVGAPRL*SESTDR
Trigger: CCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCC...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGAGGCGAACAAGGGCCTaGAGAGGAGGCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVRRTRA*RGGRRV
Trigger: GACCCTCCTGCCTCCTCTCCAGGCCCTTGTTCGCCT...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGGCCCTCCCCGCTGGCTaGCCTTGGCCAGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGALPAG*PWPGLV
Trigger: GACCAGACCTGGCCAAGGTCAGCCAGCGGGGAGGGC...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GTCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATGGCCAGGTGGCGCAAACGCCCCTaGCAGCCTGGGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VSTLASRGVQVRALPMARWRKRP*QPGTLW
Trigger: CCAAAGGGTCCCAGGCTGTCAGGGGCGTTTGCGCCA...CCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGCTTGGGGACAGGGGATaGTTGACAGTCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVLGDRG*LTVSTL
Trigger: CAGGGTGCTGACTGTCAAGCATCCCCTGTCCCCAAG...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GTCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATGGCCAGGTCTGACCCACGCCCTTaGAGGTGGCGCAAACGCCCC +
Preference number: 4 (lower is better)
Translates to: VSTLASRGVQVRALPMARSDPRP*RWRKRP
Trigger: GGGGCGTTTGCGCCACCTGCAAGGGCGTGGGTCAGA...CCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACCTTCTCCTGCTCTGTaGTCTGCGGGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKPSPAL*SAGLRL
Trigger: GAGGCGGAGGCCCGCAGAGCACAGAGCAGGAGAAGG...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGCTCGGGGCCCTGGCTaGGATCACCGCGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLARGPG*DHRGRV
Trigger: CACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAG +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVSWETS*DQSPRE
Trigger: CTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGA...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAAGGGCCACTCTGGGTGTaGCTGGGAGCCCTTCCCATG +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKGPLWV*LGALPM
Trigger: CATGGGAAGGGCTCCCAGCCACACCCAGAGTGGCCC...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGACGGAGCCCCAAGCTTaGACCCCAGGCCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGTEPQA*TPGHRG
Trigger: CCCGCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGT...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCACGGAGCCCCAAGCTTaGACCCCAGGCCATCGCGGG +
Preference number: 4 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRTEPQA*TPGHRG
Trigger: CCCGCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGT...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGAAGACGGAGGGCCGGCTaGGTGCTGGAAGGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGRRRAG*VLEGLG
Trigger: GCCCAACCCTTCCAGCACCCAGCCGGCCCTCCGTCT...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGGAGGAAGAGGCAGACTaGCTTGTCCTGGGAGACATC +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVEEEAD*LVLGDI
Trigger: GATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTC...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTCCGTCCAGGTCCCCTaGTGTCCAGAATGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVSVQVP*CPEWLS
Trigger: AGAAAGCCATTCTGGACACCAGGGGACCTGGACGGA...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGCCCTCCCCGCTGGCTaGCCTTGGCCAGGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRGWVSALSRATVFMQVAALPAG*PWPGLV
Trigger: GACCAGACCTGGCCAAGGTCAGCCAGCGGGGAGGGC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCCTGGGGCCTGCCTGCTaGCCCCGCGGAGCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRLGPAC*PRGAPR
Trigger: TCTGGGAGCTCCGCGGGGGCAGCAGGCAGGCCCCAG...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGAGTGGGGCCTCCAGGTaGCCCTCGGAGATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGSGASR*PSEMAL
Trigger: CAAGGCCATCTCCGAGGGGCACCTGGAGGCCCCACT...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCGCACAGCTCCGCCTCTaGGCTCGGGGCCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFAQLRL*ARGPGW
Trigger: CCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGC...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTCGGACTGCACCGGGTaGGCCATGGGGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPSDCTG*AMGAWA
Trigger: GGCCCAGGCCCCCATGGCCCACCCGGTGCAGTCCGA...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGAGGTCTCCAGGGCCTaGGAGCTGCGGTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCEVSRA*ELRSGG
Trigger: CCCTCCTGACCGCAGCTCCCAGGCCCTGGAGACCTC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCGGGACAGGGGATGCTTaGCAGTCAGCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRGTGDA*QSAPWP
Trigger: AGGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCC...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCGCGGAGGATGTTAAGTaGGGCAGTTGCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPPPPTHTSGASELCPWCAEDVK*GSCLLP
Trigger: GGGAAGGAGGCAACTGCCTCACTTAACATCCTCCGC...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GTCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATGGCCAGGAGATGCTTCCGAAGCTaGCAGGTGTGGGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: VSTLASRGVQVRALPMARRCFRS*QVWEEA
Trigger: CGCCTCTTCCCACACCTGTCAGCTTCGGAAGCATCT...CCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAAAGATGCTTCCGAAGCTaGCAGGTGTGGGAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKRCFRS*QVWEEA
Trigger: CGCCTCTTCCCACACCTGTCAGCTTCGGAAGCATCT...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GTCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATGGCCAGGGCTGGGCTGGAAGCCTaGAACTACCTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VSTLASRGVQVRALPMARAGLEA*NYLSST
Trigger: GGTGCTGCTTAGGTAGTTTCAGGCTTCCAGCCCAGC...CCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCCACCTCGGGGGCCTCTaGGCTCTGTCCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRHLGGL*ALSLVP
Trigger: GGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTG...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCTCAGAGGCTGGGGCCTaGCTGCTGCCCCCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSSEAGA*LLPPRS
Trigger: GCTCCGCGGGGGCAGCAGGCAGGCCCCAGCCTCTGA...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGGGGCGCCGTCCACGTTaGCCTGTTGCATGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGGRRPR*PVACCF
Trigger: GAAGCAGCATGCAACAGGGCAACGTGGACGGCGCCC...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTAGAGCGCCCTGGCTGTaGTGTGCCCATTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPRAPWL*CAHSRG
Trigger: GCCCCTGGAATGGGCACAGCACAGCCAGGGCGCTCT...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCTGGGACAAGGGGCTCTaGAGGGACCTCAGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLWDKGL*RDLSAP
Trigger: TGGCGCGCTGAGGTCCCTCCAGAGCCCCTTGTCCCA...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAAGGGTGTGAGAAGGTCTaGGCATGTGTGGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKGCEKV*ACVALR
Trigger: TCGGAGTGCCACACATGCCCAGACCTTCTCACACCC...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGTGGGGCACGGGCTGTaGGGACCCTCCGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSVGHGL*GPSVQV
Trigger: GACCTGGACGGAGGGTCCCCACAGCCCGTGCCCCAC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGCGGCTAGAACCAAGATaGAGCCGGGACAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGRLEPR*SRDSRA
Trigger: GGCCCTGCTGTCCCGGCTCCATCTTGGTTCTAGCCG...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGCTTTGCTGGTGCTGCTaGGAGCACAGATGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGLCWCC*EHRWAG
Trigger: CCCTGCCCATCTGTGCTCTCAGCAGCACCAGCAAAG...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGGGAGGACGCCCTCCTTaGGCTGGCCCGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRGGRPP*AGPGGG
Trigger: TCCCCCTCCCGGGCCAGCTCAAGGAGGGCGTCCTCC...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGGGACAGGGGATGCTTaGCAGTCAGCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCGTGDA*QSAPWP
Trigger: AGGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCCCAGACTGCTGGGGTTaGGATCCCAGGACGCGTCCG +
Preference number: 4 (lower is better)
Translates to: GPTSLLRVHRQEGALLRLPDCWG*DPRTRP
Trigger: CGGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGG...GAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGTCCCCAGGTGGGGACTaGCGTAGGAACACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGWVSALSRATVFMQVASPGGD*RRNTSP
Trigger: GGGGCTGGTGTTCCTACGTCAGTCCCCACCTGGGGA...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCATTGGGTTCGCTGTaGTTTCCTTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPPPPTHTSGASELCPWCPLGSL*FPSSLQ
Trigger: CTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGG...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGACAGGAAGGAGCTCTaGTGCGTCTCTCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCDRKEL*CVSPRQ
Trigger: CTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCTGTC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GAGCACAGCTCCGCCTCTGCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGCCCAGGCTCTGTACATaGAAGTGTATTCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: EHSSASALGALAGITAGVPRLCT*KCIPKP
Trigger: AGGTTTGGGAATACACTTGCATGTACAGAGCCTGGG...CACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGCAGAGGCGGAGCTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTCCTGCTCTGTGCTCTaGGGGCCTCCGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPSCSVL*GPPPPT
Trigger: TGTAGGAGGCGGAGGCCCGCAGAGCACAGAGCAGGA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTCCCAAGCCCTTCTCCTaGTCTGTGCTCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPPKPFS*SVLCGP
Trigger: AGGCCCGCAGAGCACAGAGCAGGAGAAGGGCTTGGG...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGTGGGCCATGGGGGCCTaGGCCTTGCGCGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKWAMGA*ALRGCS
Trigger: GCTGCAGCCGCGCAAGGCCCAGGCCCCCATGGCCCA...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCCTCGGCCCTCCCCGCTaGCTGACCTTGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRLGPPR*LTLARS
Trigger: AGACCTGGCCAAGGTCAGCCAGCGGGGAGGGCCGAG...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTACGCCCCTGACAGCCTaGGACCCTTTGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCTPLTA*DPLGSP
Trigger: GGGACTTCCCAAAGGGTCCCAGGCTGTCAGGGGCGT...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCGCCGAGGGCCCCACTTaGCTCCTTTCGGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRAEGPT*LLSGVP
Trigger: TGGGACCCCCGAAAGGAGCCAAGTGGGGCCCTCGGC...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGTGGGGCACGGGCTGTaGGGACCCTCCGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERVGHGL*GPSVQV
Trigger: GACCTGGACGGAGGGTCCCCACAGCCCGTGCCCCAC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTCGGCTAGAACCAAGATaGAGCCGGGACAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPRLEPR*SRDSRA
Trigger: GGCCCTGCTGTCCCGGCTCCATCTTGGTTCTAGCCG...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGCTTCTCAAGCCAGCTaGGTTCAGAGGCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLASQAS*VQRLGP
Trigger: AGGCCCCAGCCTCTGAACTCAGCTGGCTTGAGAAGC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTGCCTGGCTCCTGTGCTaGAGGAAACTCGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPAWLLC*RKLGLH
Trigger: GTGCAGTCCGAGTTTCCTTCAGCACAGGAGCCAGGC...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCGACGACGGCCAGGATaGGGTAATCTCTGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLRRRPG*GNLWGL
Trigger: AAGCCCCCAGAGATTACCTCATCCTGGCCGTCGTCG...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp GTCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATGGCCAGGTGGGACAAAGGATGCTaGCTTCAACAGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSTLASRGVQVRALPMARWDKGC*LQQLWA
Trigger: GGCCCAAAGCTGTTGAAGTCAGCATCCTTTGTCCCA...CCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCGGAGGGCCGGCTGGGTaGTGGAAGGGTTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSGGPAG*WKGWAE
Trigger: CTCAGCCCAACCCTTCCAGCACCCAGCCGGCCCTCC...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCTCTGACCCACGCCCTTaGAGGTGGCGCAAACGCCCC +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFSDPRP*RWRKRP
Trigger: GGGGCGTTTGCGCCACCTGCAAGGGCGTGGGTCAGA...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTAGAGCGCCCTGGCTGTaGTGTGCCCATTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSRAPWL*CAHSRG
Trigger: GCCCCTGGAATGGGCACAGCACAGCCAGGGCGCTCT...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCTCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LWDTGRGWVSALSRATVFSELSR*PGPASA
Trigger: AGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGA...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTGCTCGGGGCCCTGGCTaGGATCACCGCGGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPARGPG*DHRGRV
Trigger: CACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGC...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGCTCGGCCCTCCCCGCTaGCTGACCTTGGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPLGPPR*LTLARS
Trigger: AGACCTGGCCAAGGTCAGCCAGCGGGGAGGGCCGAG...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCACGCCCCTGACAGCCTaGGACCCTTTGGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGTPLTA*DPLGSP
Trigger: GGGACTTCCCAAAGGGTCCCAGGCTGTCAGGGGCGT...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGCCAGAGCCTGTGCGTaGCCAGTTCCATCGACCTCG +
Preference number: 4 (lower is better)
Translates to: GRGWVSALSRATVFMQVAARACA*PVPSTS
Trigger: CGAGGTCGATGGAACTGGCCACGCACAGGCTCTGGC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCTGGCTGTGGCTGTCCTaGGTTCTGAGTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: GPPPPTHTSGASELCPWCWLWLS*VLSVNK
Trigger: CTTGTTCACACTCAGAACCCAGGACAGCCACAGCCA...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCTCTGAGCTCTGTCCCTaGTGCCCTAGGAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: GPPPPTHTSGASELCPWCSELCP*CPRKLS
Trigger: TGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGA...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGAGACACAGGGAGAGGCTaGGTTAGTGCGTTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGDTGRG*VSALSR
Trigger: CCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTC...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGGACACAGGGAGAGGCTaGGTTAGTGCGTTAAGCCGG +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGDTGRG*VSALSR
Trigger: CCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTC...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGAGAAGGCAGTGTGGGGTaGGTCTTGCTACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGEGSVG*VLLLPV
Trigger: CACAGGGAGTAGCAAGACCCACCCCACACTGCCTTC...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGCTGGGCTGGAAGCCTaGAACTACCTAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCAGLEA*NYLSST
Trigger: GGTGCTGCTTAGGTAGTTTCAGGCTTCCAGCCCAGC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGTCCCCAGGTGGGGACTaGCGTAGGAACACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPSPGGD*RRNTSP
Trigger: GGGGCTGGTGTTCCTACGTCAGTCCCCACCTGGGGA...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCCGCCTCTCCCCTGTGTaGCGTGACTTCACGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRRLSPV*RDFTRD
Trigger: GTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCG...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTCACCTCGGGGGCCTCTaGGCTCTGTCCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGHLGGL*ALSLVP
Trigger: GGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTG...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGAAGGAAACTCGGACTaGACCGGGTGGGCCATGGGG +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSEGNSD*TGWAMG
Trigger: CCCCATGGCCCACCCGGTGCAGTCCGAGTTTCCTTC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGACCATTGGGTTCGCTGTaGTTTCCTTCCTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGPLGSL*FPSSLQ
Trigger: CTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGG...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCGGGGCCCCACGTCTTTaGTCCGAGTCCACAGACAGG +
Preference number: 4 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRGAPRL*SESTDR
Trigger: CCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCC...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTGTGTGGGGTGGGTCTTaGTACTCCCTGTGGGACACA +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCVWGGS*YSLWDT
Trigger: TGTGTCCCACAGGGAGTAGCAAGACCCACCCCACAC...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGGGGCCGGCTGGGTGCTaGAAGGGTTGGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPGPAGC*KGWAEL
Trigger: AAGCTCAGCCCAACCCTTCCAGCACCCAGCCGGCCC...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCAGGAGGTGGTGGCGATaGAGGACGCCCTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRRRWWR*RTPSLS
Trigger: GCTCAAGGAGGGCGTCCTCCATCGCCACCACCTCCT...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCCTTGGGCATAGGAGGTaGTGGCGATGGAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFLGHRR*WRWRTP
Trigger: GGGCGTCCTCCATCGCCACCACCTCCTATGCCCAAG...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCTCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSSELSR*PGPASA
Trigger: AGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGA...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTCCTGTGGCTGGAGCCTaGGCCAGGGAGAAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSPVAGA*AREKCR
Trigger: CCTACACTTCTCCCTGGCCCAGGCTCCAGCCACAGG...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCCCTGTGGCTGGAGCCTaGGCCAGGGAGAAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRPVAGA*AREKCR
Trigger: CCTACACTTCTCCCTGGCCCAGGCTCCAGCCACAGG...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTACTCTGGCTGTGAGGTaGGGCTGCCCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSTLAVR*GCPGQE
Trigger: TTCCTGCCCTGGGCAGCCCCACCTCACAGCCAGAGT...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTGCCAGAGCCTGTGCGTaGCCAGTTCCATCGACCTCG +
Preference number: 4 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPARACA*PVPSTS
Trigger: CGAGGTCGATGGAACTGGCCACGCACAGGCTCTGGC...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCCCAGACTGCTGGGGTTaGGATCCCAGGACGCGTCCG +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVPDCWG*DPRTRP
Trigger: CGGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGG...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGATGGGACAAAGGATGCTaGCTTCAACAGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGWDKGC*LQQLWA
Trigger: GGCCCAAAGCTGTTGAAGTCAGCATCCTTTGTCCCA...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCCGCCTCTCCCCTGTGTaGCGTGACTTCACGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERRLSPV*RDFTRD
Trigger: GTCCCTCGTGAAGTCACGTCACACAGGGGAGAGGCG...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGCCCTGGCTGTTCTaGTCCAGATCCAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPRPWLF*SRSRGP
Trigger: GGGGCCTCTGGATCTGGAGCAGAACAGCCAGGGCCT...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCAGGAAGGAGCTCTGCTaGGTCTCTCCCCGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERRKELC*VSPRQR
Trigger: ACGCTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCT...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCGTCCCCCGACTCTCCTaGAGACGGGGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSVPRLS*RRGPSA
Trigger: AGCTGAAGGACCCCGTCTGCAGGAGAGTCGGGGGAC...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGTCCCCCGACTCTCCTaGAGACGGGGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERVPRLS*RRGPSA
Trigger: AGCTGAAGGACCCCGTCTGCAGGAGAGTCGGGGGAC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCACCTCTGTACTGACCTaGTCTTCCCTTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LWDTGRGWVSALSRATVFTSVLT*SSLPRA
Trigger: GGCCCGGGGAAGGGAAGAGCAGGTCAGTACAGAGGT...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCCAGAGCCAGAGCCTGTaGGTGGCCAGTTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFQSQSL*VASSID
Trigger: GTCGATGGAACTGGCCACGCACAGGCTCTGGCTCTG...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGCCCTGGCTGTGCTGTaGCCATTCCAGGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERALAVL*PFQGHL
Trigger: CAGATGCCCCTGGAATGGGCACAGCACAGCCAGGGC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGGAGCTCTGTCCCTGGTaGCCTAGGAAACTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGELCPW*PRKLSS
Trigger: ACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTC...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCTCCTGCTCTGTGCTCTaGGGGCCTCCGCCTCCTACA +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERSCSVL*GPPPPT
Trigger: TGTAGGAGGCGGAGGCCCGCAGAGCACAGAGCAGGA...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCGGGCCACTGTGTTCATaGAGGTGGCGGCTAGAACCA +
Preference number: 4 (lower is better)
Translates to: GPTSLLRVHRQEGALLRLGPLCS*RWRLEP
Trigger: TGGTTCTAGCCGCCACCTGCATGAACACAGTGGCCC...GAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGGCTGCAGCTCCAGGCTaGGACAAGGGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKAAAPG*DKGLWR
Trigger: CCTCCAGAGCCCCTTGTCCCAGCCTGGAGCTGCAGC...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAAGCAGTTTTCGCTGCTTaGTGGAACCCAGGAAATTGT +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKAVFAA*WNPGNC
Trigger: ACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGC...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCGAGGTCTCCAGGGCCTaGGAGCTGCGGTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGEVSRA*ELRSGG
Trigger: CCCTCCTGACCGCAGCTCCCAGGCCCTGGAGACCTC...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGACTCTGGCTGTGAGGTaGGGCTGCCCAGGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPTLAVR*GCPGQE
Trigger: TTCCTGCCCTGGGCAGCCCCACCTCACAGCCAGAGT...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGCGAACAAGGGCCTaGAGAGGAGGCAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPRRTRA*RGGRRV
Trigger: GACCCTCCTGCCTCCTCTCCAGGCCCTTGTTCGCCT...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTTTCTGTCCTCTCCCTaGGTTGCTGAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPFLSSP*VAEAED
Trigger: GTCCTCAGCCTCAGCAACCCAGGGAGAGGACAGAAA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTTTATCCTCGCCTGCCTaGAAGAGCGCCCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSLSSPA*KSALAV
Trigger: CACAGCCAGGGCGCTCTTCCAGGCAGGCGAGGATAA...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCTTATCCTCGCCTGCCTaGAAGAGCGCCCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRLSSPA*KSALAV
Trigger: CACAGCCAGGGCGCTCTTCCAGGCAGGCGAGGATAA...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCATGGTGAAGGCAGTGTaGGGTGGGTCTTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLMVKAV*GGSCYS
Trigger: GGAGTAGCAAGACCCACCCCACACTGCCTTCACCAT...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 72 bp CCTGTCTTCACAGACACGCCTCTCGGCGCCACCACCTaGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PVFTDTPLGATT*QRRMLSEAVAS
Trigger: GGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAGAGGCGTGTCTGTGAAGACAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GCGCTCGGGGCCCTGGCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAAAGGAAATTGTGGGAATaGGAAACAAGCCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: ALGALAGITAGVWHEACKRKLWE*ETSQTA
Trigger: AGCAGTCTGGCTTGTTTCTCATTCCCACAATTTCCT...TTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGCCAGGGCCCCGAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGCGGAGGATGTTAAGTaGGGCAGTTGCCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRAEDVK*GSCLLP
Trigger: GGGAAGGAGGCAACTGCCTCACTTAACATCCTCCGC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTTGGCGCAAACGCCCCTaGCAGCCTGGGACCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGWRKRP*QPGTLW
Trigger: CCAAAGGGTCCCAGGCTGTCAGGGGCGTTTGCGCCA...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCCCCATAAAAACTCTCTaGCCCACGCCCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GPTSLLRVHRQEGALLRLPIKTL*PTPLQV
Trigger: CACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGG...GAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCCCAGTCCCTTCTGTATaGGCAGGAGAGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGPVPSV*AGEAGV
Trigger: AACTCCAGCCTCTCCTGCTCATACAGAAGGGACTGG...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCGTCATGTTCCTCCCGTaGCAATCCCTCAACCATCGG +
Preference number: 4 (lower is better)
Translates to: GPTSLLRVHRQEGALLRLVMFLP*QSLNHR
Trigger: CCGATGGTTGAGGGATTGTCACGGGAGGAACATGAC...GAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCCCTAGGACTATTTGTGTGGGTGTaGGAAGGTCTGGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: RLLHTPRGPLSSVPGALGLFVWV*EGLGMC
Trigger: ACACATGCCCAGACCTTCTCACACCCACACAAATAG...TCCTAGGGCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCGAGGCGTGCGGGTCCTaGCATCCTGGTACCTGTCTT +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSEACGS*HPGTCL
Trigger: AAGACAGGTACCAGGATGGCAGGACCCGCACGCCTC...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCCCTTCTCCTGCTCTGTaGTCTGCGGGCCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGPSPAL*SAGLRL
Trigger: GAGGCGGAGGCCCGCAGAGCACAGAGCAGGAGAAGG...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCCCCAAGCCCTTCTCCTaGTCTGTGCTCTGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVPKPFS*SVLCGP
Trigger: AGGCCCGCAGAGCACAGAGCAGGAGAAGGGCTTGGG...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCGTGTGGGGTGGGTCTTaGTACTCCCTGTGGGACACA +
Preference number: 4 (lower is better)
Translates to: LWDTGRGWVSALSRATVFVWGGS*YSLWDT
Trigger: TGTGTCCCACAGGGAGTAGCAAGACCCACCCCACAC...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCGTTTTCGCTGCTTGGTaGAACCCAGGAAATTGTGGG +
Preference number: 4 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRVFAAW*NPGNCG
Trigger: CCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAAC...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCTCCTGGGAGACATCCTaGGACCAGAGTCCTCGAGAG +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFSWETS*DQSPRE
Trigger: CTCTCGAGGACTCTGGTCCCAGGATGTCTCCCAGGA...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGACCTTGGCCAGGTCTaGTCCCAGGCTACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRDLGQV*SQATAE
Trigger: TTCTGCTGTAGCCTGGGACCAGACCTGGCCAAGGTC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGCCGAGGGCCCCACTTaGCTCCTTTCGGGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAAEGPT*LLSGVP
Trigger: TGGGACCCCCGAAAGGAGCCAAGTGGGGCCCTCGGC...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGGGTGTGAGAAGGTCTaGGCATGTGTGGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSGCEKV*ACVALR
Trigger: TCGGAGTGCCACACATGCCCAGACCTTCTCACACCC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTCAGGGGCATCTGCAGTaGCTTCCCCTAAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCQGHLQ*LPLSGG
Trigger: GCCACCGCTTAGGGGAAGCCACTGCAGATGCCCCTG...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTCTGAGCTCTGTCCCTaGTGCCCTAGGAAACTCTCA +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPSELCP*CPRKLS
Trigger: TGAGAGTTTCCTAGGGCACCAGGGACAGAGCTCAGA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTCTTGCTACTCCCTGTaGGACACAGGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPSCYSL*DTGRGW
Trigger: CCAGCCTCTCCCTGTGTCCCACAGGGAGTAGCAAGA...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGAAGGCAGTGTGGGGTaGGTCTTGCTACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSEGSVG*VLLLPV
Trigger: CACAGGGAGTAGCAAGACCCACCCCACACTGCCTTC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 72 bp CCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATaGGGTTCGCTGTGCTTTCCTTCCTCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGRVRESKPRYP*GSLCFPSSLQA
Trigger: AGCCTGGAGCGAGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTCCCATAAAAACTCTCTaGCCCACGCCCTTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPPIKTL*PTPLQV
Trigger: CACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGG...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGCTTGGGGACAGGGGATaGTTGACAGTCAGCACCCTG +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPLGDRG*LTVSTL
Trigger: CAGGGTGCTGACTGTCAAGCATCCCCTGTCCCCAAG...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTGACAGGAAGGAGCTCTaGTGCGTCTCTCCCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGDRKEL*CVSPRQ
Trigger: CTGGCGGGGAGAGACGCAGCAGAGCTCCTTCCTGTC...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCGAGGCGTGCGGGTCCTaGCATCCTGGTACCTGTCTT +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVEACGS*HPGTCL
Trigger: AAGACAGGTACCAGGATGGCAGGACCCGCACGCCTC...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGACCTCTGTACTGACCTaGTCTTCCCTTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRTSVLT*SSLPRA
Trigger: GGCCCGGGGAAGGGAAGAGCAGGTCAGTACAGAGGT...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCGACAGAAATACTCCGTaGTCACACCCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRDRNTP*SHPPPA
Trigger: TGCTGGGGGAGGGTGTGAGCACGGAGTATTTCTGTC...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCAGAGCCAGAGCCTGTaGGTGGCCAGTTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRQSQSL*VASSID
Trigger: GTCGATGGAACTGGCCACGCACAGGCTCTGGCTCTG...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTCAAGTTATCCTCGCCTaGCTGGAAGAGCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCQVILA*LEERPG
Trigger: GCCAGGGCGCTCTTCCAGGCAGGCGAGGATAACTTG...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCGGGCCACTGTGTTCATaGAGGTGGCGGCTAGAACCA +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSGPLCS*RWRLEP
Trigger: TGGTTCTAGCCGCCACCTGCATGAACACAGTGGCCC...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCCTCCCAGAAAGACGCTaGAGCCTGCAGCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGLPERR*SLQLCS
Trigger: TGAACAAAGCTGCAGGCTCCAGCGTCTTTCTGGGAG...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTTTGAAGGGTAGGCCCTaGCTGTTCTGCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRLKGRP*LFCSRS
Trigger: GGATCTGGAGCAGAACAGCCAGGGCCTACCCTTCAA...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGTTTTCGCTGCTTGGTaGAACCCAGGAAATTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLVFAAW*NPGNCG
Trigger: CCCACAATTTCCTGGGTTCCACCAAGCAGCGAAAAC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTCGGGTCCTGCCATCCTaGTACCTGTCTTCACAGACA +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSRVLPS*YLSSQT
Trigger: TGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCG...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGTGTATTCCCAAACCTaGTCCCCCGACTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSVYSQT*SPDSPA
Trigger: TGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACAC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGGCCACTCTGGGTGTaGCTGGGAGCCCTTCCCATG +
Preference number: 4 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAGPLWV*LGALPM
Trigger: CATGGGAAGGGCTCCCAGCCACACCCAGAGTGGCCC...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGGCTTCCCCTAAGCGGTaGCTGTGGCTGTCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRASPKR*LWLSWV
Trigger: AACCCAGGACAGCCACAGCCACCGCTTAGGGGAAGC...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGCTATTTGTGTGGGTGTaGGAAGGTCTGGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: GRGWVSALSRATVFMQVALFVWV*EGLGMC
Trigger: ACACATGCCCAGACCTTCTCACACCCACACAAATAG...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTCCCAGGCTCTGTACATaGAAGTGTATTCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPPRLCT*KCIPKP
Trigger: AGGTTTGGGAATACACTTGCATGTACAGAGCCTGGG...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCCAAGTTATCCTCGCCTaGCTGGAAGAGCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGQVILA*LEERPG
Trigger: GCCAGGGCGCTCTTCCAGGCAGGCGAGGATAACTTG...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGGCCCCGAGAGGGTCTTaGACAGATTCAGGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPAPRGS*TDSGSC
Trigger: ACAAGACCCTGAATCTGTCCAAGACCCTCTCGGGGC...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CCA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTAACCACGTTACCCATTaGGTTCGCTGTGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCNHVTH*VRCAFL
Trigger: AAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTT...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCTTTCCTCATTCATCCTaGCAGTTTTCGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRFPHSS*QFSLLG
Trigger: ACCAAGCAGCGAAAACTGCCAGGATGAATGAGGAAA...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCATCACCGCGGGCGTGTaGCACGAAGCATGCAAACAG +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVITAGV*HEACKQ
Trigger: CTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGAT...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTGGAAAATCATGGGCCTaGAACGAAGGAAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRGKSWA*NEGRGR
Trigger: TCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGTCTTGCTACTCCCTGTaGGACACAGGGAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKSCYSL*DTGRGW
Trigger: CCAGCCTCTCCCTGTGTCCCACAGGGAGTAGCAAGA...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
3UTR CAA 72 bp GGCTACAGCAGAAGTAGGAGGAAGAGGCAGACTGGCTaGTCCTGGGAGACATCCTGGGACCAGAGTCCTCGA +
Preference number: 4 (lower is better)
Translates to: GYSRSRRKRQTG*SWETSWDQSPR
Trigger: TCGAGGACTCTGGTCCCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTCCTACTTCTGCTGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCTCCACGTTGCCCTGTTaGATGCTGCTTCGAGACATG +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSSTLPC*MLLRDM
Trigger: CATGTCTCGAAGCAGCATGCAACAGGGCAACGTGGA...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTTTCCCTTTGAGTCTGTaGTTTTGGAACTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPFPLSL*FWNLGT
Trigger: TGTCCCCAAGTTCCAAAAGCACAGACTCAAAGGGAA...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTTCCAGGGAAGGCCTCTaGTGTTTGTGGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPSREGL*CLWMAR
Trigger: CCTGGCCATCCACAAACAGCAGAGGCCTTCCCTGGA...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGAGCTCTGTCCCTGGTaGCCTAGGAAACTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERELCPW*PRKLSS
Trigger: ACTTGAGAGTTTCCTAGGGCACCAGGGACAGAGCTC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCATCACCGCGGGCGTGTaGCACGAAGCATGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGITAGV*HEACKQ
Trigger: CTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGAT...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGGTGTATTCCCAAACCTaGTCCCCCGACTCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRVYSQT*SPDSPA
Trigger: TGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACAC...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCATGAGCAGGAGAGGCTaGAGTTTATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSMSRRG*SLFPRW
Trigger: CCACCTGGGGAATAAACTCCAGCCTCTCCTGCTCAT...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGTTTCTGTCCTCTCCCTaGGTTGCTGAGGCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKFLSSP*VAEAED
Trigger: GTCCTCAGCCTCAGCAACCCAGGGAGAGGACAGAAA...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTCCTAAGCGGTGGCTGTaGCTGTCCTGGGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPPKRWL*LSWVLS
Trigger: ACTCAGAACCCAGGACAGCCACAGCCACCGCTTAGG...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCCCTAAGCGGTGGCTGTaGCTGTCCTGGGTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGPKRWL*LSWVLS
Trigger: ACTCAGAACCCAGGACAGCCACAGCCACCGCTTAGG...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGCTGTGTTCATGCAGGTaGCGGCTAGAACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPLCSCR*RLEPRW
Trigger: CCATCTTGGTTCTAGCCGCCACCTGCATGAACACAG...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCAGCTTTGTTCAAGTTTaGGGCCAACTTTGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LWDTGRGWVSALSRATVFSFVQV*GQLCWC
Trigger: GCACCAGCAAAGTTGGCCTCAAACTTGAACAAAGCT...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCTGTTCTCTGCCTTGGTaGGGAGTATCTCCATCTCCG +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVCSLPW*GVSPSP
Trigger: CGGAGATGGAGATACTCCTCACCAAGGCAGAGAACA...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR TCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTCCAGTCCCTTCTGTATaGGCAGGAGAGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPPVPSV*AGEAGV
Trigger: AACTCCAGCCTCTCCTGCTCATACAGAAGGGACTGG...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTCTCCCCTGTGTGACGTaGCTTCACGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGLPCVT*LHEGQK
Trigger: TTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAG...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCCTCCCCTGTGTGACGTaGCTTCACGAGGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGLPCVT*LHEGQK
Trigger: TTTCTGTCCCTCGTGAAGTCACGTCACACAGGGGAG...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTGTCATGTTCCTCCCGTaGCAATCCCTCAACCATCGG +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPVMFLP*QSLNHR
Trigger: CCGATGGTTGAGGGATTGTCACGGGAGGAACATGAC...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCTTCCCTTTGAGTCTGTaGTTTTGGAACTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGFPLSL*FWNLGT
Trigger: TGTCCCCAAGTTCCAAAAGCACAGACTCAAAGGGAA...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGCCTGGCAGTTTTCGCTaGTTGGTGGAACCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKPGSFR*LVEPRK
Trigger: TTTCCTGGGTTCCACCAAGCAGCGAAAACTGCCAGG...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCCGCGTGTGGCACGAAGCATaGAAACAGTCCATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GSPRACGTKHANSPFFPRVWHEA*KQSILS
Trigger: GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACAC...GCGGGGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGTGTGGCACGAAGCATaGAAACAGTCCATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: APRLCSESTDRKELCCVSVWHEA*KQSILS
Trigger: GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACAC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTGACAGAAATACTCCGTaGTCACACCCTCCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPDRNTP*SHPPPA
Trigger: TGCTGGGGGAGGGTGTGAGCACGGAGTATTTCTGTC...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCTGTGCTTTTGGAACTTaGGGACAGGGGATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERCAFGT*GQGMLD
Trigger: GTCAAGCATCCCCTGTCCCCAAGTTCCAAAAGCACA...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCCGGGTCCTGCCATCCTaGTACCTGTCTTCACAGACA +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGRVLPS*YLSSQT
Trigger: TGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCG...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTGAGGAAGAGGCAGACTaGCTTGTCCTGGGAGACATC +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPEEEAD*LVLGDI
Trigger: GATGTCTCCCAGGACAAGCCAGTCTGCCTCTTCCTC...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTATGAGCAGGAGAGGCTaGAGTTTATTCCCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCMSRRG*SLFPRW
Trigger: CCACCTGGGGAATAAACTCCAGCCTCTCCTGCTCAT...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCTCCGTCCAGGTCCCCTaGTGTCCAGAATGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGSVQVP*CPEWLS
Trigger: AGAAAGCCATTCTGGACACCAGGGGACCTGGACGGA...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp ATCCTGGGACCAGAGTCCTCGAGAGATGCTTCCGAAGCTGACAGGTGTGGGAAGCTGTGTTCATGCAGGTaGCGGCTAGAACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: ILGPESSRDASEADRCGKLCSCR*RLEPRW
Trigger: CCATCTTGGTTCTAGCCGCCACCTGCATGAACACAG...CTTCCCACACCTGTCAGCTTCGGAAGCATCTCTCGAGGACTCTGGTCCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR TCA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCAGGAAATTGTGGGAATaGGAAACAAGCCAGACTGCT +
Preference number: 4 (lower is better)
Translates to: LGATTLQRRMLSEAVASFRKLWE*ETSQTA
Trigger: AGCAGTCTGGCTTGTTTCTCATTCCCACAATTTCCT...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGGTGGCGGAAAATCATGGGCCTaGAACGAAGGAAGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GQTTDPHKNSLTHALAGGGKSWA*NEGRGR
Trigger: TCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC...GCCACCTGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTTGGCTGTGGCTGTCCTaGGTTCTGAGTGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGWLWLS*VLSVNK
Trigger: CTTGTTCACACTCAGAACCCAGGACAGCCACAGCCA...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp TACATGCAAGTGTATTCCCAAACCTGGTCCCCCGACTCTCCTGCAGACGGGGTCGTCATCCTTGTTCTCTaGCTTGGTGAGGAGTATCTC +
Preference number: 4 (lower is better)
Translates to: YMQVYSQTWSPDSPADGVVILVL*LGEEYL
Trigger: GAGATACTCCTCACCAAGGCAGAGAACAAGGATGAC...GACCCCGTCTGCAGGAGAGTCGGGGGACCAGGTTTGGGAATACACTTGCATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR GCA 90 bp GTCCCTGGTGCCCTAGGAAACTCTCAAGTTATCCTCGCCTGCCTGGAAGAGCGCGCTAGCCCAGCTCCCTaGTTAAGTTTATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPGALGNSQVILACLEERASPAP*LSLFLL
Trigger: CAGAAGAAATAAACTTAAGCAGGGAGCTGGGCTAGC...GCGCTCTTCCAGGCAGGCGAGGATAACTTGAGAGTTTCCTAGGGCACCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTTGTGCTTTTGGAACTTaGGGACAGGGGATGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGCAFGT*GQGMLD
Trigger: GTCAAGCATCCCCTGTCCCCAAGTTCCAAAAGCACA...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTAACCACGTTACCCATTaGGTTCGCTGTGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPNHVTH*VRCAFL
Trigger: AAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTT...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CTAGAGTCCCTTCGGGTGTCATGTTCCTCCCGTGACAATCCCTCAACCATCGGTGCAGTTTTCGCTGCTTaGTGGAACCCAGGAAATTGT +
Preference number: 4 (lower is better)
Translates to: LESLRVSCSSRDNPSTIGAVFAA*WNPGNC
Trigger: ACAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGC...ACCGATGGTTGAGGGATTGTCACGGGAGGAACATGACACCCGAAGGGACTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCCAGGAGCATCTGTTTTaGTCTCAAAGATCCCATAAA +
Preference number: 4 (lower is better)
Translates to: AGITAGVWHEACKQSILSQEHLF*SQRSHK
Trigger: TTTATGGGATCTTTGAGACCAAAACAGATGCTCCTG...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR GCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAGCTAGCCCAGCTCCCTaGTTAAGTTTATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAASPAP*LSLFLL
Trigger: CAGAAGAAATAAACTTAAGCAGGGAGCTGGGCTAGC...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CCA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCACAGGAGCATCTGTTTTaGTCTCAAAGATCCCATAAA +
Preference number: 4 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAQEHLF*SQRSHK
Trigger: TTTATGGGATCTTTGAGACCAAAACAGATGCTCCTG...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGCCTCCGCCTCCTACACACACCTCGGGGGCCTCTGAGCTCTGTCCCTGGTGCGGCCGAGGGCCCCACTaGGCTCCTTTCGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GPPPPTHTSGASELCPWCGRGPH*APFGGP
Trigger: GGGACCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCC...GCACCAGGGACAGAGCTCAGAGGCCCCCGAGGTGTGTGTAGGAGGCGGAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS CCA 90 bp CGGGGGCAGGGGCGTCCCTCAGGAGACGGAGGGCCGGCTGGGTGCTaGAAGGGTTGGGCTGAGCTTCTCAAGCCAGCTGAGTTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RGQGRPSGDGGPAGC*KGWAELLKPAEFRG
Trigger: GCCTCTGAACTCAGCTGGCTTGAGAAGCTCAGCCCAACCCTTCCAGCACCCAGCCGGCCCTCCGTCTCCTGAGGGACGCCCCTGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 90 bp GGTCGGGGGCAGGGGCGTCCCTCAGGAGACGGAGGGCCGGCTGGGTaGTGGAAGGGTTGGGCTGAGCTTCTCAAGCCAGCTGAGTTCAGA +
Preference number: 5 (lower is better)
Translates to: GRGQGRPSGDGGPAG*WKGWAELLKPAEFR
Trigger: TCTGAACTCAGCTGGCTTGAGAAGCTCAGCCCAACCCTTCCAGCACCCAGCCGGCCCTCCGTCTCCTGAGGGACGCCCCTGCCCCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 90 bp GGGCGTCCCTCAGGAGACGGAGGGCCGGCTGGGTGCTGGAAGGGTTaGGCTGAGCTTCTCAAGCCAGCTGAGTTCAGAGGCTGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GRPSGDGGPAGCWKG*AELLKPAEFRGWGL
Trigger: CAGGCCCCAGCCTCTGAACTCAGCTGGCTTGAGAAGCTCAGCCCAACCCTTCCAGCACCCAGCCGGCCCTCCGTCTCCTGAGGGACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCCCCGCTGGCTGACCTaGGCCAGGTCTGGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLPRWLT*ARSGPR
Trigger: CCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGG...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS GCA 90 bp GTTGGGCTGAGCTTCTCAAGCCAGCTGAGTTCAGAGGCTGGGGCCTaGCTGCTGCCCCCGCGGAGCTCCCAGAAAGACGCTGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VGLSFSSQLSSEAGA*LLPPRSSQKDAGAC
Trigger: GCAGGCTCCAGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCAGGCAGGCCCCAGCCTCTGAACTCAGCTGGCTTGAGAAGCTCAGCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp CTGTGGGACACAGGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCTGGAGGACGCCCTCCTaGAGCTGGCCCGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LWDTGRGWVSALSRATVFWRTPS*SWPGRG
Trigger: CCCCCTCCCGGGCCAGCTCAAGGAGGGCGTCCTCCA...GAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCCTGTGTCCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp GCGTGCGGGTCCTGCCATCCTGGTACCTGTCTTCACAGACACGCCTCTCGGCGCGGGGACAGGGGATGCTaGACAGTCAGCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: ACGSCHPGTCLHRHASRRGDRGC*TVSTLA
Trigger: GGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCCC...GCGCCGAGAGGCGTGTCTGTGAAGACAGGTACCAGGATGGCAGGACCCGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp ATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTTTCGGGGGGCCAGACTGCTGGGGTaGAGATCCCAGGACGCGTCC +
Preference number: 5 (lower is better)
Translates to: MGLERRKRPRAPLGSFRGARLLG*RSQDAS
Trigger: GGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGGC...CCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCAT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp AAACTACCTAAGCAGCACCAGACGGAGCCCCAAGCTTGCACCCCAGGCCATCGCGGCCGAGGGCCCCACTaGGCTCCTTTCGGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: KLPKQHQTEPQACTPGHRGRGPH*APFGGP
Trigger: GGGACCCCCGAAAGGAGCCAAGTGGGGCCCTCGGCC...GCGATGGCCTGGGGTGCAAGCTTGGGGCTCCGTCTGGTGCTGCTTAGGTAGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS CCA 90 bp TGGAAGGGTTGGGCTGAGCTTCTCAAGCCAGCTGAGTTCAGAGGCTaGGGCCTGCCTGCTGCCCCCGCGGAGCTCCCAGAAAGACGCTGG +
Preference number: 5 (lower is better)
Translates to: WKGWAELLKPAEFRG*GLPAAPAELPERRW
Trigger: CCAGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCAGGCAGGCCCCAGCCTCTGAACTCAGCTGGCTTGAGAAGCTCAGCCCAACCCTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 90 bp AATCTCTGGGGGCTTCTTGGTCTTGGGCATAGGAGGTGGTGGCGATaGAGGACGCCCTCCTTGAGCTGGCCCGGGAGGGGGACCGAGGCA +
Preference number: 5 (lower is better)
Translates to: NLWGLLGLGHRRWWR*RTPSLSWPGRGTEA
Trigger: TGCCTCGGTCCCCCTCCCGGGCCAGCTCAAGGAGGGCGTCCTCCATCGCCACCACCTCCTATGCCCAAGACCAAGAAGCCCCCAGAGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 90 bp TCAGCACCCTGGCCTCCCGCGGTGTGCAGGTCAGAGCTCTCCCGATaGCCAGGGCCGGCCTCTGCTAGCCCAGCTCCCTGCTTAAGTTTA +
Preference number: 5 (lower is better)
Translates to: SAPWPPAVCRSELSR*PGPASASPAPCLSL
Trigger: TAAACTTAAGCAGGGAGCTGGGCTAGCAGAGGCCGGCCCTGGCCATCGGGAGAGCTCTGACCTGCACACCGCGGGAGGCCAGGGTGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCGCCAGACTGCTGGGGTaGAGATCCCAGGACGCGTCC +
Preference number: 5 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLARLLG*RSQDAS
Trigger: GGACGCGTCCTGGGATCTCAACCCCAGCAGTCTGGC...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGCGGGCGCCGTCCACGTaGCCCTGTTGCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GRGWVSALSRATVFMQVARAPST*PCCMLL
Trigger: AAGCAGCATGCAACAGGGCAACGTGGACGGCGCCCG...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 90 bp GGCTGGGGCCTGCCTGCTGCCCCCGCGGAGCTCCCAGAAAGACGCTaGAGCCTGCAGCTTTGTTCAAGTTTGAGGCCAACTTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GWGLPAAPAELPERR*SLQLCSSLRPTLLV
Trigger: CACCAGCAAAGTTGGCCTCAAACTTGAACAAAGCTGCAGGCTCCAGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCAGGCAGGCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp CTCGGCGCCACCACCTTGCAGCGGAGGATGTTAAGTGAGGCAGTTGCCTCCTTCGGGGACAGGGGATGCTaGACAGTCAGCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGATTLQRRMLSEAVASFGDRGC*TVSTLA
Trigger: GGCCAGGGTGCTGACTGTCAAGCATCCCCTGTCCCC...GAAGGAGGCAACTGCCTCACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGGGGCCCCACGTCTTaGCTCCGAGTCCACAGACAG +
Preference number: 5 (lower is better)
Translates to: GPTSLLRVHRQEGALLRLWGPTS*LRVHRQ
Trigger: CTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCCA...GAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGCTGTGGAAGGCTCAGAGCTCCAGCTGTGCATAGACCCAGGGCCCCTCCCTGTCTCGGCGCCACCACCTaGCAGCGGAGGATGTTAAGT +
Preference number: 5 (lower is better)
Translates to: GCGRLRAPAVHRPRAPPCLGATT*QRRMLS
Trigger: ACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG...ACAGGGAGGGGCCCTGGGTCTATGCACAGCTGGAGCTCTGAGCCTTCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTCTCGGCGCCACCACCTaGCAGCGGAGGATGTTAAGT +
Preference number: 5 (lower is better)
Translates to: GLWGPSVQVPWCPEWLSPLGATT*QRRMLS
Trigger: ACTTAACATCCTCCGCTGCAAGGTGGTGGCGCCGAG...AGGAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCCCGCTGGCTGACCTaGGCCAGGTCTGGTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRPRWLT*ARSGPR
Trigger: CCTGGGACCAGACCTGGCCAAGGTCAGCCAGCGGGG...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCGAAGGCCTCTGCTGTTaGTGGATGGCCAGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGEGLCC*WMARGP
Trigger: TGGGCCCCTGGCCATCCACAAACAGCAGAGGCCTTC...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTTGTCCTCTCCCTGGGTaGCTGAGGCTGAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRCPLPG*LRLRTP
Trigger: CGGGGTCCTCAGCCTCAGCAACCCAGGGAGAGGACA...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGGGCCCCGAGAGGGTCTaGGACAGATTCAGGGTCTTG +
Preference number: 5 (lower is better)
Translates to: GRGWVSALSRATVFMQVAGPERV*DRFRVL
Trigger: CAAGACCCTGAATCTGTCCAAGACCCTCTCGGGGCC...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTGAAGGCCTCTGCTGTTaGTGGATGGCCAGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: APRLCSESTDRKELCCVSEGLCC*WMARGP
Trigger: TGGGCCCCTGGCCATCCACAAACAGCAGAGGCCTTC...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGTGTCCTCTCCCTGGGTaGCTGAGGCTGAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: GPGRSVGKIMGLERRKRPCPLPG*LRLRTP
Trigger: CGGGGTCCTCAGCCTCAGCAACCCAGGGAGAGGACA...CGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGAAGAGGCAGACTGGCTaGTCCTGGGAGACATCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGWVSALSRATVFMQVAKRQTG*SWETSW
Trigger: CCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTT...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp ACGGGCTGTGGGGACCCTCCGTCCAGGTCCCCTGGTGTCCAGAATGGCTTTCTCCTGGAGCCTGCAGCTTaGTTCAAGTTTGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: TGCGDPPSRSPGVQNGFLLEPAA*FKFEAN
Trigger: GTTGGCCTCAAACTTGAACAAAGCTGCAGGCTCCAG...GAGAAAGCCATTCTGGACACCAGGGGACCTGGACGGAGGGTCCCCACAGCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp GGAAAATCATGGGCCTGGAACGAAGGAAGAGGCCGAGGGCCCCACTTGGCTCCTAAGAGGCAGACTGGCTaGTCCTGGGAGACATCCTGG +
Preference number: 5 (lower is better)
Translates to: GKSWAWNEGRGRGPHLAPKRQTG*SWETSW
Trigger: CCAGGATGTCTCCCAGGACAAGCCAGTCTGCCTCTT...AGGAGCCAAGTGGGGCCCTCGGCCTCTTCCTTCGTTCCAGGCCCATGATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTCTGACTTCAACAGCTTaGGGCCACTCTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRLTSTA*GHSGCG
Trigger: GCCACACCCAGAGTGGCCCAAAGCTGTTGAAGTCAG...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCAGTGTGGGGTGGGTCTaGCTACTCCCTGTGGGACAC +
Preference number: 5 (lower is better)
Translates to: AGITAGVWHEACKQSILSSVGWV*LLPVGH
Trigger: GTGTCCCACAGGGAGTAGCAAGACCCACCCCACACT...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGAGTTTGAGGCCAACTTaGCTGGTGCTGCTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GRGWVSALSRATVFMQVASLRPT*LVLLRA
Trigger: TGCTCTCAGCAGCACCAGCAAAGTTGGCCTCAAACT...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCACCCTCGGAGATGGCCTaGAAGGGTAGGCCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAPSEMA*KGRPWL
Trigger: CAGCCAGGGCCTACCCTTCAAGGCCATCTCCGAGGG...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp CGGGAAAACGCCCACTCATCATCCCTCCTTCCAGAGCCAGAGCCTGTGCGTGGCGGCAGTTTTCGCTGCTaGGTGGAACCCAGGAAATTG +
Preference number: 5 (lower is better)
Translates to: RENAHSSSLLPEPEPVRGGSFRC*VEPRKL
Trigger: CAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCC...GCCACGCACAGGCTCTGGCTCTGGAAGGAGGGATGATGAGTGGGCGTTTTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGGAGAGGCTGGGTTAGTGCGTTAAGCCGGGCCACTGTGTTCATGCAGGTGGCGAAACCACGTTACCCATaGGGTTCGCTGTGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GRGWVSALSRATVFMQVAKPRYP*GSLCFP
Trigger: AGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTT...CGCCACCTGCATGAACACAGTGGCCCGGCTTAACGCACTAACCCAGCCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCATGGGGCCCCACGTCTTaGCTCCGAGTCCACAGACAG +
Preference number: 5 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAWGPTS*LRVHRQ
Trigger: CTGTCTGTGGACTCGGAGCAAAGACGTGGGGCCCCA...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTCTGACTTCAACAGCTTaGGGCCACTCTGGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCLTSTA*GHSGCG
Trigger: GCCACACCCAGAGTGGCCCAAAGCTGTTGAAGTCAG...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTAGTGTGGGGTGGGTCTaGCTACTCCCTGTGGGACAC +
Preference number: 5 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPSVGWV*LLPVGH
Trigger: GTGTCCCACAGGGAGTAGCAAGACCCACCCCACACT...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GGCCCCACTTGGCTCCTTTCGGGGGTCCCATTAGGTCCTAAGATGAGAGGCCGTTTTGAGTCTGTGCTTTaGGAACTTGGGGACAGGGGA +
Preference number: 5 (lower is better)
Translates to: GPTWLLSGVPLGPKMRGRFESVL*ELGDRG
Trigger: TCCCCTGTCCCCAAGTTCCAAAAGCACAGACTCAAA...ACGGCCTCTCATCTTAGGACCTAATGGGACCCCCGAAAGGAGCCAAGTGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GCCCCACGTCTTTGCTCCGAGTCCACAGACAGGAAGGAGCTCTGCTGCGTCTCTTTTGAGTCTGTGCTTTaGGAACTTGGGGACAGGGGA +
Preference number: 5 (lower is better)
Translates to: APRLCSESTDRKELCCVSFESVL*ELGDRG
Trigger: TCCCCTGTCCCCAAGTTCCAAAAGCACAGACTCAAA...AGAGACGCAGCAGAGCTCCTTCCTGTCTGTGGACTCGGAGCAAAGACGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp GCTGGGATCACCGCGGGCGTGTGGCACGAAGCATGCAAACAGTCCATTCTTTCCGGCAGTTTTCGCTGCTaGGTGGAACCCAGGAAATTG +
Preference number: 5 (lower is better)
Translates to: AGITAGVWHEACKQSILSGSFRC*VEPRKL
Trigger: CAATTTCCTGGGTTCCACCAAGCAGCGAAAACTGCC...GGAAAGAATGGACTGTTTGCATGCTTCGTGCCACACGCCCGCGGTGATCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS-3UTR CAA 90 bp CCTGGGCCAGGGAGAAGTGTAGGGAAAATCATGGGCCTGGAACGAAGGAAGAGGCACGGCAGAGCCTATTaGTGTGGGTGTGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PGPGRSVGKIMGLERRKRHGRAY*CGCEKV
Trigger: GACCTTCTCACACCCACACAAATAGGCTCTGCCGTG...CCTCTTCCTTCGTTCCAGGCCCATGATTTTCCCTACACTTCTCCCTGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS TCA 90 bp TCTTGGACAGATTCAGGGTCTTGTCATCCTTGTTCTCTGCCTTGGTaGGGAGTATCTCCATCTCCGGCAGGTCCAGGAATGCGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: SWTDSGSCHPCSLPW*GVSPSPAGPGMRRS
Trigger: GCTCCGCCGCATTCCTGGACCTGCCGGAGATGGAGATACTCCTCACCAAGGCAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTCACGGCAGAGCCTATTaGTGTGGGTGTGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPHGRAY*CGCEKV
Trigger: GACCTTCTCACACCCACACAAATAGGCTCTGCCGTG...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333813.4
ENST00000626647.1
CDS GCA 90 bp CGAGAGGGTCTTGGACAGATTCAGGGTCTTGTCATCCTTGTTCTCTaGCTTGGTGAGGAGTATCTCCATCTCCGGCAGGTCCAGGAATGC +
Preference number: 5 (lower is better)
Translates to: REGLGQIQGLVILVL*LGEEYLHLRQVQEC
Trigger: GCATTCCTGGACCTGCCGGAGATGGAGATACTCCTCACCAAGGCAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAGACCCTCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp CAGGACGGTCAAACAACAGACCCCCATAAAAACTCTCTGACCCACGCCCTTGCAATCTCTGGGGGCTTCTaGGTCTTGGGCATAGGAGGT +
Preference number: 5 (lower is better)
Translates to: QDGQTTDPHKNSLTHALAISGGF*VLGIGG
Trigger: ACCTCCTATGCCCAAGACCAAGAAGCCCCCAGAGAT...TGCAAGGGCGTGGGTCAGAGAGTTTTTATGGGGGTCTGTTGTTTGACCGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp AGATCCCAGGACGCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTCAGCTTTGTTCAAGTTaGAGGCCAACTTTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RSQDASGRVNHVTHWVRCQLCSS*RPTLLV
Trigger: CACCAGCAAAGTTGGCCTCAAACTTGAACAAAGCTG...ACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGCGTCCTGGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS-3UTR CAA 90 bp GCGTCCGGGAGAGTAAACCACGTTACCCATTGGGTTCGCTGTGCTTTCCTTCCTGACAGATTCAGGGTCTaGTCATCCTTGTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ASGRVNHVTHWVRCAFLPDRFRV*SSLFSA
Trigger: GGCAGAGAACAAGGATGACAAGACCCTGAATCTGTC...AGGAAGGAAAGCACAGCGAACCCAATGGGTAACGTGGTTTACTCTCCCGGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 72 bp GCCCGGGAGGGGGACCGAGGCAGTGGGGCCTCCAGGTaGCCCTCGGAGATGGCCTTGAAGGGTAGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: AREGDRGSGASR*PSEMALKGRPW
Trigger: CCAGGGCCTACCCTTCAAGGCCATCTCCGAGGGGCACCTGGAGGCCCCACTGCCTCGGTCCCCCTCCCGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 72 bp CAGGGGCGTCCCTCAGGAGACGGAGGGCCGGCTGGGTaGTGGAAGGGTTGGGCTGAGCTTCTCAAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: QGRPSGDGGPAG*WKGWAELLKPA
Trigger: AGCTGGCTTGAGAAGCTCAGCCCAACCCTTCCAGCACCCAGCCGGCCCTCCGTCTCCTGAGGGACGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 72 bp GGGCTTCTTGGTCTTGGGCATAGGAGGTGGTGGCGATaGAGGACGCCCTCCTTGAGCTGGCCCGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: GLLGLGHRRWWR*RTPSLSWPGRG
Trigger: CCCCCTCCCGGGCCAGCTCAAGGAGGGCGTCCTCCATCGCCACCACCTCCTATGCCCAAGACCAAGAAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS TCA 72 bp CAGGTCCAGGAATGCGGCGGAGCCTGGCTCCTGTGCTaGAGGAAACTCGGACTGCACCGGGTGGGCCATGGG +
Preference number: 6 (lower is better)
Translates to: QVQECGGAWLLC*RKLGLHRVGHG
Trigger: CCCATGGCCCACCCGGTGCAGTCCGAGTTTCCTTCAGCACAGGAGCCAGGCTCCGCCGCATTCCTGGACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 72 bp GGCAGTGGGGCCTCCAGGTGCCCCTCGGAGATGGCCTaGAAGGGTAGGCCCTGGCTGTTCTGCTCCAGATCC +
Preference number: 6 (lower is better)
Translates to: GSGASRCPSEMA*KGRPWLFCSRS
Trigger: GGATCTGGAGCAGAACAGCCAGGGCCTACCCTTCAAGGCCATCTCCGAGGGGCACCTGGAGGCCCCACTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 72 bp AGCTTCTCAAGCCAGCTGAGTTCAGAGGCTGGGGCCTaGCTGCTGCCCCCGCGGAGCTCCCAGAAAGACGCT +
Preference number: 6 (lower is better)
Translates to: SFSSQLSSEAGA*LLPPRSSQKDA
Trigger: AGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCAGGCAGGCCCCAGCCTCTGAACTCAGCTGGCTTGAGAAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 72 bp AGGTGCCCCTCGGAGATGGCCTTGAAGGGTAGGCCCTaGCTGTTCTGCTCCAGATCCAGAGGCCCCGAGAGG +
Preference number: 6 (lower is better)
Translates to: RCPSEMALKGRP*LFCSRSRGPER
Trigger: CCTCTCGGGGCCTCTGGATCTGGAGCAGAACAGCCAGGGCCTACCCTTCAAGGCCATCTCCGAGGGGCACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS TCA 72 bp GCCAGACGGGGCAGAAGCAGGCGACGACGGCCAGGATaGGGTAATCTCTGGGGGCTTCTTGGTCTTGGGCAT +
Preference number: 6 (lower is better)
Translates to: ARRGRSRRRRPG*GNLWGLLGLGH
Trigger: ATGCCCAAGACCAAGAAGCCCCCAGAGATTACCTCATCCTGGCCGTCGTCGCCTGCTTCTGCCCCGTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 72 bp CGGCCCAGCCTCCGGGCGCCGTCCACGTTGCCCTGTTaGATGCTGCTTCGAGACATGATGGAAATGATGAGG +
Preference number: 6 (lower is better)
Translates to: RPSLRAPSTLPC*MLLRDMMEMMR
Trigger: CCTCATCATTTCCATCATGTCTCGAAGCAGCATGCAACAGGGCAACGTGGACGGCGCCCGGAGGCTGGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 72 bp GCGGCCCAGCCTCCGGGCGCCGTCCACGTTGCCCTGTaGCATGCTGCTTCGAGACATGATGGAAATGATGAG +
Preference number: 6 (lower is better)
Translates to: AAQPPGAVHVAL*HAASRHDGNDE
Trigger: CTCATCATTTCCATCATGTCTCGAAGCAGCATGCAACAGGGCAACGTGGACGGCGCCCGGAGGCTGGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 72 bp CTGCCTGCTGCCCCCGCGGAGCTCCCAGAAAGACGCTaGAGCCTGCAGCTTTGTTCAAGTTTGAGGCCAACT +
Preference number: 6 (lower is better)
Translates to: LPAAPAELPERR*SLQLCSSLRPT
Trigger: AGTTGGCCTCAAACTTGAACAAAGCTGCAGGCTCCAGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 72 bp GACGACGGCCAGGATGAGGTAATCTCTGGGGGCTTCTaGGTCTTGGGCATAGGAGGTGGTGGCGATGGAGGA +
Preference number: 6 (lower is better)
Translates to: DDGQDEVISGGF*VLGIGGGGDGG
Trigger: TCCTCCATCGCCACCACCTCCTATGCCCAAGACCAAGAAGCCCCCAGAGATTACCTCATCCTGGCCGTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 90 bp TGCTGCCCCCGCGGAGCTCCCAGAAAGACGCTGGAGCCTGCAGCTTaGTTCAAGTTTGAGGCCAACTTTGCTGGTGCTGCTGAGAGCACA +
Preference number: 6 (lower is better)
Translates to: CCPRGAPRKTLEPAA*FKFEANFAGAAEST
Trigger: TGTGCTCTCAGCAGCACCAGCAAAGTTGGCCTCAAACTTGAACAAAGCTGCAGGCTCCAGCGTCTTTCTGGGAGCTCCGCGGGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 90 bp AGAGGCCCCGAGAGGGTCTTGGACAGATTCAGGGTCTTGTCATCCTaGTTCTCTGCCTTGGTGAGGAGTATCTCCATCTCCGGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RGPERVLDRFRVLSS*FSALVRSISISGRS
Trigger: GGACCTGCCGGAGATGGAGATACTCCTCACCAAGGCAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAGACCCTCTCGGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 72 bp CGCGGAGCTCCCAGAAAGACGCTGGAGCCTGCAGCTTaGTTCAAGTTTGAGGCCAACTTTGCTGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RGAPRKTLEPAA*FKFEANFAGAA
Trigger: AGCAGCACCAGCAAAGTTGGCCTCAAACTTGAACAAAGCTGCAGGCTCCAGCGTCTTTCTGGGAGCTCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CCA 72 bp TGTTCTGCTCCAGATCCAGAGGCCCCGAGAGGGTCTTaGACAGATTCAGGGTCTTGTCATCCTTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: CSAPDPEAPRGS*TDSGSCHPCSL
Trigger: CAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAGACCCTCTCGGGGCCTCTGGATCTGGAGCAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS CAA 72 bp AGAGGCCCCGAGAGGGTCTTGGACAGATTCAGGGTCTaGTCATCCTTGTTCTCTGCCTTGGTGAGGAGTATC +
Preference number: 6 (lower is better)
Translates to: RGPERVLDRFRV*SSLFSALVRSI
Trigger: GATACTCCTCACCAAGGCAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAGACCCTCTCGGGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333813.4
CDS GCA 72 bp CTTGGACAGATTCAGGGTCTTGTCATCCTTGTTCTCTaGCTTGGTGAGGAGTATCTCCATCTCCGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LGQIQGLVILVL*LGEEYLHLRQV
Trigger: GACCTGCCGGAGATGGAGATACTCCTCACCAAGGCAGAGAACAAGGATGACAAGACCCTGAATCTGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333813.4