RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAPPC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000167632

Ensembl transcript IDs: ENST00000438773.4, ENST00000517667.5, ENST00000518723.1, ENST00000518839.1, ENST00000519482.1, ENST00000520532.5, ENST00000520857.5, ENST00000521167.1, ENST00000521667.5, ENST00000521700.5, ENST00000521944.1, ENST00000522504.5, ENST00000523777.5, ENST00000524162.5, ENST00000634178.1, ENST00000648948.2

Found 954 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCAAGGGAGATGTGAGCCGTGTGCTTTCTCTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTGCCCACTGTGGCGGCAGCTCGGGCC +
Preference number: 1 (lower is better)
Translates to: LKGDVSRVLSLSGPP*GTQGQLPTVAAARA
Trigger: GGCCCGAGCTGCCGCCACAGTGGGCAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAGAGAAAGCACACGGCTCACATCTCCCTTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp GGCCAGGGAGCACCCAGAAACAGCCCTGGGCTGCCAGCCCAGGCCTaGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCATCAAC +
Preference number: 1 (lower is better)
Translates to: GQGAPRNSPGLPAQA*TFAHHGWRASLGIN
Trigger: GTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTTTCTGGGTGCTCCCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 90 bp GGAGGCCACAGGGTGACCTTGCTCCCAGCGAGGGAGGTTTGGGCCTaGGACTTCAGGTCCTCAGGAAGTTCCCTCAGCCCCGCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: GGHRVTLLPAREVWA*DFRSSGSSLSPAGL
Trigger: GAGGCCTGCGGGGCTGAGGGAACTTCCTGAGGACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGGGAGCAAGGTCACCCTGTGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp GTGGCCAGGCCCTCAACTACGCTGAGGCATCCTGAACGGAAGGGCTaGAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACC +
Preference number: 1 (lower is better)
Translates to: VARPSTTLRHPERKG*RDRPGVSTPYCSQT
Trigger: GGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCCTGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp GTGTGCTTTCTCTCTCCGGTCCTCCCTGAGGAACGCAGGGCCAGCTaGCCACTGTGGCGGCAGCTCGGGCCCAGTCACACTCCTTCACTG +
Preference number: 1 (lower is better)
Translates to: VCFLSPVLPEERRAS*PLWRQLGPSHTPSL
Trigger: CAGTGAAGGAGTGTGACTGGGCCCGAGCTGCCGCCACAGTGGGCAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAGAGAAAGCACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp AGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCA +
Preference number: 1 (lower is better)
Translates to: SPGLPAQAWTFAHHG*RASLGINHPRPPTA
Trigger: TGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR TCA 90 bp TGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATaGGCAGCACAGCACGGCTGGGGCCCCAGGTCACAGAAATGGGTG +
Preference number: 1 (lower is better)
Translates to: WPKGSRWTREVPLLG*AAQHGWGPRSQKWV
Trigger: CACCCATTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR TCA 90 bp TCCTCAGGAAGTTCCCTCAGCCCCGCAGGCCTCCTGATGCCAACATaGCTCTGCCCCATGGGAGGCCAGGGCAGCCACTTCCTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: SSGSSLSPAGLLMPT*LCPMGGQGSHFLAL
Trigger: CAGAGCCAGGAAGTGGCTGCCCTGGCCTCCCATGGGGCAGAGTCATGTTGGCATCAGGAGGCCTGCGGGGCTGAGGGAACTTCCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp GTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTaGTGGGAAGCCAGCCACCTGAGGTGGGGGCTGACGGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: VRSLTQNPSLPGSGF*WEASHLRWGLTGWV
Trigger: CACCCAGCCCGTCAGCCCCCACCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp CAGCACGGCTGGGGCCCCAGGTCACAGAAATGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGCACCCGCTTTGGGATTTCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: QHGWGPRSQKWVQGS*DLGWMGTRFGISSA
Trigger: AGCAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGCCCCAGCCGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR TCA 90 bp AGAAACAGCCCAGGTGGCCAGGCCCTCAACTACGCTGAGGCATCCTaGACGGAAGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTA +
Preference number: 1 (lower is better)
Translates to: RNSPGGQALNYAEAS*TEGLKRPPWGLHPL
Trigger: TAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp CATGACTCTGCCCCATGGGAGGCCAGGGCAGCCACTTCCTGGCTCTaGCTGTTTGGCCAACTGGCCTTTAGGAAGCCCCGCTCTCTGTCC +
Preference number: 1 (lower is better)
Translates to: HDSAPWEARAATSWL*LFGQLAFRKPRSLS
Trigger: GGACAGAGAGCGGGGCTTCCTAAAGGCCAGTTGGCCAAACAGGCAGAGCCAGGAAGTGGCTGCCCTGGCCTCCCATGGGGCAGAGTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp GCTGGGGCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCTTTGGGATTTCCTCTGCTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: AGAPGHRNGCRDPGT*AGWAPALGFPLLQP
Trigger: AGGCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR TCA 90 bp GTGGGTAGTGTAGACACACCCCAGCTCTGGCCCTCAAGGGAGATGTaGGCCGTGTGCTTTCTCTCTCCGGTCCTCCCTGAGGAACGCAGG +
Preference number: 1 (lower is better)
Translates to: VGSVDTPQLWPSREM*AVCFLSPVLPEERR
Trigger: CCTGCGTTCCTCAGGGAGGACCGGAGAGAGAAAGCACACGGCTCACATCTCCCTTGAGGGCCAGAGCTGGGGTGTGTCTACACTACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp GGCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGGATTTCCTCTGCTTCAGCCTGTGTA +
Preference number: 1 (lower is better)
Translates to: GPRSQKWVQGSWDLG*MGTRFGISSASACV
Trigger: TACACAGGCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 90 bp GCAACTGCTGGACTGTATTGCCAGGTAGCCAGTAGCGTGGGGCCCTaGAAGAGGCTGGAGGATACTGCGCTGTCACTGAGACACCTGCCC +
Preference number: 1 (lower is better)
Translates to: ATAGLYCQVASSVGP*KRLEDTALSLRHLP
Trigger: GGGCAGGTGTCTCAGTGACAGCGCAGTATCCTCCAGCCTCTTCCAGGGCCCCACGCTACTGGCTACCTGGCAATACAGTCCAGCAGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp TGTTCCATTCAGAAACAGCCCAGGTGGCCAGGCCCTCAACTACGCTaGGGCATCCTGAACGGAAGGGCTGAAGAGACCGCCCTGGGGTCT +
Preference number: 1 (lower is better)
Translates to: CSIQKQPRWPGPQLR*GILNGRAEETALGS
Trigger: AGACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCTGAATGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp GGAGGGTGGGAAGCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATaGTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAG +
Preference number: 1 (lower is better)
Translates to: GGWEAAHALRLCPVS*SPFLSMAKGKSLDE
Trigger: CTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGCTTCCCACCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 90 bp CTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACA +
Preference number: 1 (lower is better)
Translates to: LVSAGDQGLFILPGT*GAKGQHSQKPAPRT
Trigger: TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp CTGTCCCCCAATACTCCATGGGAGTTTCAGTGCCCAACGGGCACCTaGCGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCC +
Preference number: 1 (lower is better)
Translates to: LSPNTPWEFQCPTGT*RAWYLLGTKGCLSS
Trigger: GGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTGCCCGTTGGGCACTGAAACTCCCATGGAGTATTGGGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp CCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATaGGCACCCGCTTTGGGATTTCCTCTGCTTCAGCCTGTGTATGGT +
Preference number: 1 (lower is better)
Translates to: PGHRNGCRDPGTWAG*APALGFPLLQPVYG
Trigger: ACCATACACAGGCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 90 bp ACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATaGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGA +
Preference number: 1 (lower is better)
Translates to: TPSGCAQSHAHHFFL*PKGSRWTREVPLLG
Trigger: TCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 90 bp AGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTaGGTCCGGCTTCTGCTGGGAAGCCAGCCACCTGAGGTGGGGGCT +
Preference number: 1 (lower is better)
Translates to: SVCLCEISNSEPVPS*VRLLLGSQPPEVGA
Trigger: AGCCCCCACCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp CTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: LLASTIHDLLRHHLS*QVAHGGLQEENQPW
Trigger: CCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR TCA 90 bp ACATCCCACGGTAAAGCTCCAAACGCTTGGAGCACACACAAGGCCTaGCTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: TSHGKAPNAWSTHKA*LQVTFSTGTERVPW
Trigger: CCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCTTGTGTGTGCTCCAAGCGTTTGGAGCTTTACCGTGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp TCTGTTCCTGGCTTACCCTCCGCTGGCCTTCAGGAGGTTTCTGAATaGACCAGGGGCCTAGAGAAGCAGCAACTGCTGGACTGTATTGCC +
Preference number: 1 (lower is better)
Translates to: SVPGLPSAGLQEVSE*TRGLEKQQLLDCIA
Trigger: GGCAATACAGTCCAGCAGTTGCTGCTTCTCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGGCCAGCGGAGGGTAAGCCAGGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp TCCCTCCCCTGCAGGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTaGCCAGATTCCTGTCTCAGCGTTTGCTTATGTGAGATCTCTAAC +
Preference number: 1 (lower is better)
Translates to: SLPCRPPSTSQTSCW*PDSCLSVCLCEISN
Trigger: GTTAGAGATCTCACATAAGCAAACGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCCTGCAGGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp ATGATCTGTTCCTGGCTTACCCTCCGCTGGCCTTCAGGAGGTTTCTaGATGCACCAGGGGCCTAGAGAAGCAGCAACTGCTGGACTGTAT +
Preference number: 1 (lower is better)
Translates to: MICSWLTLRWPSGGF*MHQGPREAATAGLY
Trigger: ATACAGTCCAGCAGTTGCTGCTTCTCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGGCCAGCGGAGGGTAAGCCAGGAACAGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp GACCAAGGATCAGAAGGGCAGAACCAACTCGCTCAGCTAGTGAAGTaGAATGGACATGATCTGTTCCTGGCTTACCCTCCGCTGGCCTTC +
Preference number: 1 (lower is better)
Translates to: DQGSEGQNQLAQLVK*NGHDLFLAYPPLAF
Trigger: GAAGGCCAGCGGAGGGTAAGCCAGGAACAGATCATGTCCATTGCACTTCACTAGCTGAGCGAGTTGGTTCTGCCCTTCTGATCCTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp AGAAGGGCAGAACCAACTCGCTCAGCTAGTGAAGTGCAATGGACATaGTCTGTTCCTGGCTTACCCTCCGCTGGCCTTCAGGAGGTTTCT +
Preference number: 1 (lower is better)
Translates to: RRAEPTRSASEVQWT*SVPGLPSAGLQEVS
Trigger: AGAAACCTCCTGAAGGCCAGCGGAGGGTAAGCCAGGAACAGATCATGTCCATTGCACTTCACTAGCTGAGCGAGTTGGTTCTGCCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp GTGCCCAGGAGATGTCTCAGGCAGCTTGAGTTAATGAATGACAAGTaGGTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGC +
Preference number: 1 (lower is better)
Translates to: VPRRCLRQLELMNDK*VTNSKQQASRDGGC
Trigger: GCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAACTCACTTGTCATTCATTAACTCAAGCTGCCTGAGACATCTCCTGGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
3UTR GCA 90 bp TTCAATGGCGTATTTTTGGGCTCTGTTGAGGTTGACACACATGGATaGTGTTTGTTCCATTCAGAAACAGCCCAGGTGGCCAGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: FNGVFLGSVEVDTHG*CLFHSETAQVARPS
Trigger: TGAGGGCCTGGCCACCTGGGCTGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 90 bp GGGGACATTGTCTACACAAGTGAGGTTGGGCTGAGCCCATCATCCTaGAATGTGTTGTTTCATTCAATGGCGTATTTTTGGGCTCTGTTG +
Preference number: 1 (lower is better)
Translates to: GDIVYTSEVGLSPSS*NVLFHSMAYFWALL
Trigger: CAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGATGATGGGCTCAGCCCAACCTCACTTGTGTAGACAATGTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp GGAATTTCAGGCACATGGCACAGGATATTTCAGGCACAGGACATGTaGATGGAATTAAAAAGAACAGCAATGGGAAGGCTAGGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: GISGTWHRIFQAQDM*MELKRTAMGRLGEG
Trigger: CCCTTCTCCTAGCCTTCCCATTGCTGTTCTTTTTAATTCCATCCACATGTCCTGTGCCTGAAATATCCTGTGCCATGTGCCTGAAATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 90 bp CTTAATTTAAGTAACTTGTCCAAGGTCAAGGAGTTGACAAGTGGCTaGGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAATCCTTGC +
Preference number: 1 (lower is better)
Translates to: LNLSNLSKVKELTSG*AGVQHLRHLPLNPC
Trigger: GCAAGGATTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCCTTGACCTTGGACAAGTTACTTAAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 90 bp AGCCCATCATCCTGCAATGTGTTGTTTCATTCAATGGCGTATTTTTaGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATT +
Preference number: 1 (lower is better)
Translates to: SPSSCNVLFHSMAYF*ALLRLTHMDAVCSI
Trigger: AATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGATGATGGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCTCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: QPWAASPGLDICPPRVEGSWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPWVQGS*DLGWMG
Trigger: GCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCGAGGGAGGTCCCTCTaGTGGGATGAGCAGCACAGC +
Preference number: 2 (lower is better)
Translates to: PWAASPGLDICPPRVEGLRGRSL*WDEQHS
Trigger: GCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTCG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 2 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGTCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRSWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGTGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRWVQGS*DLGWMG
Trigger: GCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCA...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGGGACCTGGGCTGGATaGGCACCCGCTTTGGGATTT +
Preference number: 2 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASGTWAG*APALGF
Trigger: AAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCC...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCCCAGGTCACAGAAATaGGTGCAGGGATCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PWAASPGLDICPPRVEGLPRSQK*VQGSWD
Trigger: GTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGCCAGCCACCTGAGGTaGGGGCTGACGGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTASHLR*GLTGWV
Trigger: CACCCAGCCCGTCAGCCCCCACCTCAGGTGGCTGGC...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCATGTCCGGGGCTTCTaGGTAGCCCAGCAAAGATGC +
Preference number: 2 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGHVRGF*VAQQRC
Trigger: GCATCTTTGCTGGGCTACGCAGAAGCCCCGGACATG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGCCAGCCACCTGAGGTaGGGGCTGACGGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: GSLEQMLNELQELRATGHASHLR*GLTGWV
Trigger: CACCCAGCCCGTCAGCCCCCACCTCAGGTGGCTGGC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGLSGPP*GTQGQL
Trigger: CAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGCTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWLSGPP*GTQGQL
Trigger: CAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAG...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTGAACGCAGGGCCAGCTaGCCACTGTGGCGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGERRAS*PLWRQL
Trigger: GAGCTGCCGCCACAGTGGGCAGCTGGCCCTGCGTTC...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGCCCAGGTCACAGAAATaGGTGCAGGGATCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRPRSQK*VQGSWD
Trigger: GTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGG...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp CAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTaGGCATCAACCATCCACGACCTCCTACGGCACCATCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: QPRPGHLPTTGGGPL*ASTIHDLLRHHLSC
Trigger: GCAGGAGAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGTGGGGGCCCCGGACTaGACTGGGCTAGCAGATGCA +
Preference number: 2 (lower is better)
Translates to: GSLEQMLNELQELRATGHVGAPD*TGLADA
Trigger: TGCATCTGCTAGCCCAGTGCAGTCCGGGGCCCCCAC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCCTGGGTCCGGCTTCTaGTGGGAAGCCAGCCACCTG +
Preference number: 2 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSAPGSGF*WEASHL
Trigger: CAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCCAGG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCTGCCAGCCCAGGCCTaGACATTTGCCCACCACGGG +
Preference number: 2 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGLPAQA*TFAHHG
Trigger: CCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGACAGAAAGGGTGCCCTaGGGGTGGGGAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWTERVP*GWGRAW
Trigger: CCAGGCCCTTCCCCACCCCCAGGGCACCCTTTCTGT...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCCGAGGGAGGTCCCTCTaGTGGGATGAGCAGCACAGC +
Preference number: 2 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLRGRSL*WDEQHS
Trigger: GCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTCG...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCTCCTGATGCCAACATaGCTCTGCCCCATGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGLLMPT*LCPMGG
Trigger: GCCTCCCATGGGGCAGAGTCATGTTGGCATCAGGAG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 2 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGLWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 2 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSARHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGGGGAGGAGGAGGAGATaGGGCTGCAGTGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWGRRRR*GCSEGL
Trigger: AAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCC...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGTCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 2 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMSWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCT +
Preference number: 2 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDRDPGT*AGWAPA
Trigger: AGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCATGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGC +
Preference number: 2 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPWVQGS*DLGWMG
Trigger: GCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCA...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACTTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: GSLEQMLNELQELRATGHFAHHG*RASLGI
Trigger: GATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAA...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACCCTCAAGGGAGATGTaGGCCGTGTGCTTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTPSREM*AVCFLS
Trigger: AGAGAGAAAGCACACGGCTCACATCTCCCTTGAGGG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGGCTCCCATCATTCACTaGGCGACAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWAPIIH*ATTGGH
Trigger: GTGGCCTCCTGTTGTCGCTCAGTGAATGATGGGAGC...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGCATGTCCGGGGCTTCTaGGTAGCCCAGCAAAGATGC +
Preference number: 2 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWHVRGF*VAQQRC
Trigger: GCATCTTTGCTGGGCTACGCAGAAGCCCCGGACATG...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGTGGAGGGCCTCTCTTaGCATCAACCATCCACGACC +
Preference number: 2 (lower is better)
Translates to: GSLEQMLNELQELRATGHVEGLS*HQPSTT
Trigger: GGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCAC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACAC +
Preference number: 2 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGILPGT*GAKGQH
Trigger: GTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGAT...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCAGACAAGCTGCTGGTaGCCAGATTCCTGTCTCAGC +
Preference number: 2 (lower is better)
Translates to: GSLEQMLNELQELRATGHQTSCW*PDSCLS
Trigger: GCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTG...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 2 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 2 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR TCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 2 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGEMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 2 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMEMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCT +
Preference number: 2 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGRDPGT*AGWAPA
Trigger: AGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCT...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGTAGCCCAGCAAAGATaGTACAGGAGGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEVAQQR*YRRNRR
Trigger: CCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTAC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 2 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGEMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGTAGCCCAGCAAAGATaGTACAGGAGGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGVAQQR*YRRNRR
Trigger: CCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTAC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 2 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSALWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCCCAGGTCACAGAAATaGGTGCAGGGATCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAPRSQK*VQGSWD
Trigger: GTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 2 (lower is better)
Translates to: FIEELLADMDTHSHGNQTKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGTTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGFAHHG*RASLGI
Trigger: GATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAA...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAACGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFERHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGGGAGGAGGAGGAGATaGGGCTGCAGTGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRGRRRR*GCSEGL
Trigger: AAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGATGGGCACCCGCTTTaGGATTTCCTCTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: AVPSLMLTISFYGQREVADGHPL*DFLCFS
Trigger: GCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATC...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 2 (lower is better)
Translates to: FIEELLADMDTHSHGNQTAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CAA 90 bp GGCGTATTTTTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTaGTTCCATTCAGAAACAGCCCAGGTGGCCAGGCCCTCAACTACG +
Preference number: 2 (lower is better)
Translates to: GVFLGSVEVDTHGCC*FHSETAQVARPSTT
Trigger: CGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAGCTCCCATCATTCACTaGGCGACAACAGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEAPIIH*ATTGGH
Trigger: GTGGCCTCCTGTTGTCGCTCAGTGAATGATGGGAGC...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 2 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACAC +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEILPGT*GAKGQH
Trigger: GTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGAT...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGATGGGCACCCGCTTTaGGATTTCCTCTGCTTCAGC +
Preference number: 2 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRDGHPL*DFLCFS
Trigger: GCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR TCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAACATTGTCTACACAAGTaGGGTTGGGCTGAGCCCATC +
Preference number: 2 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEHCLHK*GWAEPI
Trigger: GATGGGCTCAGCCCAACCTCACTTGTGTAGACAATG...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGTAGCCCAGCAAAGATaGTACAGGAGGAACAGGAGG +
Preference number: 2 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRVAQQR*YRRNRR
Trigger: CCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTAC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: FIEELLADMDTHSHGNQTLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGCCCCGGACTGCACTaGGCTAGCAGATGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGPGLH*ASRCRE
Trigger: CTCCCTGCATCTGCTAGCCCAGTGCAGTCCGGGGCC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGGGTCCGGCTTCTGCTaGGAAGCCAGCCACCTGAGG +
Preference number: 2 (lower is better)
Translates to: HIGFSRLLYASISNLDLWGSGFC*EASHLR
Trigger: CCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGGTCCGGCTTCTGCTaGGAAGCCAGCCACCTGAGG +
Preference number: 2 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGSGFC*EASHLR
Trigger: CCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CCA 90 bp ACACACTCTGTTAACAAAGTGCCCAGGAGATGTCTCAGGCAGCTTGAGTTAATGGCAGGCATCAAGGGATaGGGGTTGCTACACAGTATC +
Preference number: 2 (lower is better)
Translates to: THSVNKVPRRCLRQLELMAGIKG*GLLHSI
Trigger: GATACTGTGTAGCAACCCCCATCCCTTGATGCCTGC...CATTAACTCAAGCTGCCTGAGACATCTCCTGGGCACTTTGTTAACAGAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634178.1
3UTR-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCTGAAGAGACCGCCCTaGGGTCTCCACCCCCTACTG +
Preference number: 2 (lower is better)
Translates to: HIGFSRLLYASISNLDLWLKRPP*GLHPLL
Trigger: CAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp GTCTACACAAGTGAGGTTGGGCTGAGCCCATCATCCTGCAATGTGTaGTTTCATTCAATGGCGTATTTTTGGGCTCTGTTGAGGTTGACA +
Preference number: 2 (lower is better)
Translates to: VYTSEVGLSPSSCNV*FHSMAYFWALLRLT
Trigger: TGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGATGATGGGCTCAGCCCAACCTCACTTGTGTAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 2 (lower is better)
Translates to: FIEELLADMDTHSHGNQTLWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR GCA 90 bp GTTAACAAAGTGCCCAGGAGATGTCTCAGGCAGCTTGAGTTAATGAATGACAAGTCAAGGGATGGGGGTTaGTACACAGTATCTAGGACC +
Preference number: 2 (lower is better)
Translates to: VNKVPRRCLRQLELMNDKSRDGG*YTVSRT
Trigger: GGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGA...CTTGTCATTCATTAACTCAAGCTGCCTGAGACATCTCCTGGGCACTTTGTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
3UTR-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 2 (lower is better)
Translates to: HIGFSRLLYASISNLDLWRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp GAGCCCATCATCCTGCAATGTGTTGTTTCATTCAATGGCGTATTTTaGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: EPIILQCVVSFNGVF*GSVEVDTHGCCLFH
Trigger: ATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGATGATGGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATTACGCTGAGGCATCCTaGACGGAAGGGCTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: SESNTARVFHIGFSRLLYYAEAS*TEGLKR
Trigger: TCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTA...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp AATGTGTTGTTTCATTCAATGGCGTATTTTTGGGCTCTGTTGAGGTaGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NVLFHSMAYFWALLR*THMDAVCSIQKQPR
Trigger: CCTGGGCTGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp TCCTGCAATGTGTTGTTTCATTCAATGGCGTATTTTTGGGCTCTGTaGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAG +
Preference number: 2 (lower is better)
Translates to: SCNVLFHSMAYFWAL*RLTHMDAVCSIQKQ
Trigger: CTGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR TCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATAGGCAGGCCATTTATTaGAGAACTGCTTGCAGACAT +
Preference number: 2 (lower is better)
Translates to: SESNTARVFHIGFSRLLYRQAIY*RTACRH
Trigger: ATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCT...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 90 bp AATATGCTTGCCACTCAGAATCAAACACTGCCAGAGTTTTCCATATaGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATC +
Preference number: 2 (lower is better)
Translates to: NMLATQNQTLPEFSI*AFLGFYMHLYLIWI
Trigger: GATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGAGTGGCAAGCATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATCATTTATTGAAGAACTaGTTGCAGACATGGACACAC +
Preference number: 2 (lower is better)
Translates to: SESNTARVFHIGFSRLLYHLLKN*LQTWTH
Trigger: GTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATG...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: QPWAASPGLDICPPRVEGGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR GCA 72 bp GCCCCATGGGAGGCCAGGGCAGCCACTTCCTGGCTCTaGCTGTTTGGCCAACTGGCCTTTAGGAAGCCCCGC +
Preference number: 3 (lower is better)
Translates to: APWEARAATSWL*LFGQLAFRKPR
Trigger: GCGGGGCTTCCTAAAGGCCAGTTGGCCAAACAGGCAGAGCCAGGAAGTGGCTGCCCTGGCCTCCCATGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGATCTCTCCTGCCAAGTaGCCCATGGGGGTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRISPAK*PMGVSR
Trigger: CCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CAA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACCCAGGCCTGGACATTaGCCCACCACGGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTPRPGH*PTTGGG
Trigger: CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp GATGTGAGCCGTGTGCTTTCTCTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTGCCCACTGTGGCGGCA +
Preference number: 3 (lower is better)
Translates to: DVSRVLSLSGPP*GTQGQLPTVAA
Trigger: TGCCGCCACAGTGGGCAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAGAGAAAGCACACGGCTCACATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp GCTGCCTTCCCTGGGGAGCCTCGAGCAGATGCTGAATaGGCTCCAGGAACTGAGGGCCACTGGACACCCGCC +
Preference number: 3 (lower is better)
Translates to: AAFPGEPRADAE*APGTEGHWTPA
Trigger: GGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCCCAGGGAAGGCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp CCAGGTGGCCAGGCCCTCAACTACGCTGAGGCATCCTaGACGGAAGGGCTGAAGAGACCGCCCTGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: PGGQALNYAEAS*TEGLKRPPWGL
Trigger: GAGACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCCTGGCCACCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 72 bp CTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTaGTGGGAAGCCAGCCACCTGAGGTGGGGGCTGACG +
Preference number: 3 (lower is better)
Translates to: LTQNPSLPGSGF*WEASHLRWGLT
Trigger: CGTCAGCCCCCACCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCCCAGGCCTGGACATTaGCCCACCACGGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLPRPGH*PTTGGG
Trigger: CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp CCCTCAACTACGCTGAGGCATCCTGAACGGAAGGGCTaGAGAGACCGCCCTGGGGTCTCCACCCCCTACTGC +
Preference number: 3 (lower is better)
Translates to: PSTTLRHPERKG*RDRPGVSTPYC
Trigger: GCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 72 bp AAACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTaGCCACCACGGGTGGAGGGCCTCTCTTGGCATCAA +
Preference number: 3 (lower is better)
Translates to: KQPWAASPGLDI*PPRVEGLSWHQ
Trigger: TTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp TGGGGCCCCAGGTCACAGAAATGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGCACCCGCTTTGGGATT +
Preference number: 3 (lower is better)
Translates to: WGPRSQKWVQGS*DLGWMGTRFGI
Trigger: AATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp CTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATCAACCATCCACGACCT +
Preference number: 3 (lower is better)
Translates to: LPAQAWTFAHHG*RASLGINHPRP
Trigger: AGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp AGGGTGACCTTGCTCCCAGCGAGGGAGGTTTGGGCCTaGGACTTCAGGTCCTCAGGAAGTTCCCTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: RVTLLPAREVWA*DFRSSGSSLSP
Trigger: GGGGCTGAGGGAACTTCCTGAGGACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGGGAGCAAGGTCACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp GGCCACAGGGTGACCTTGCTCCCAGCGAGGGAGGTTTaGGCCTGGGACTTCAGGTCCTCAGGAAGTTCCCTC +
Preference number: 3 (lower is better)
Translates to: GHRVTLLPAREV*AWDFRSSGSSL
Trigger: GAGGGAACTTCCTGAGGACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGGGAGCAAGGTCACCCTGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTATCTCTCCTGCCAAGTaGCCCATGGGGGTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RAEETALGSPPPTAARPSISPAK*PMGVSR
Trigger: CCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp CAGAAACAGCCCAGGTGGCCAGGCCCTCAACTACGCTaGGGCATCCTGAACGGAAGGGCTGAAGAGACCGCC +
Preference number: 3 (lower is better)
Translates to: QKQPRWPGPQLR*GILNGRAEETA
Trigger: GGCGGTCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp GCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: AGDQGLFILPGT*GAKGQHSQKPA
Trigger: GGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGATAAACAGCCCTTGGTCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp AGTGCCCAACGGGCACCTGACGAGCCTGGTATCTGCTaGGGACCAAGGGCTGTTTATCCTCCCTGGGACCTG +
Preference number: 3 (lower is better)
Translates to: SAQRAPDEPGIC*GPRAVYPPWDL
Trigger: CAGGTCCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTGCCCGTTGGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp CACACACAAGGCCTGACTCCAGGTCACCTTCTCTACTaGGACAGAAAGGGTGCCCTGGGGGTGGGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: HTQGLTPGHLLY*DRKGALGVGKG
Trigger: GCCCTTCCCCACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCTTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp CCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCTTTGGGATTTCCTCTG +
Preference number: 3 (lower is better)
Translates to: PGHRNGCRDPGT*AGWAPALGFPL
Trigger: CAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp CTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTaGCATCAACCATCCACGACCTCCTACGGCACCATC +
Preference number: 3 (lower is better)
Translates to: LDICPPRVEGLS*HQPSTTSYGTI
Trigger: GATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR-3UTR CAA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTGGAAGAAAACCAGCCTaGGGGGATTCCAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGGRKPA*GDSKAQ
Trigger: CTGGGCCTTGGAATCCCCCAAGGCTGGTTTTCTTCC...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCGGAAGAAAACCAGCCTaGGGGGATTCCAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLGRKPA*GDSKAQ
Trigger: CTGGGCCTTGGAATCCCCCAAGGCTGGTTTTCTTCC...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 72 bp GGCTTACCCTCCGCTGGCCTTCAGGAGGTTTCTGAATaGACCAGGGGCCTAGAGAAGCAGCAACTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: GLPSAGLQEVSE*TRGLEKQQLLD
Trigger: GTCCAGCAGTTGCTGCTTCTCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGGCCAGCGGAGGGTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp GGACTGTATTGCCAGGTAGCCAGTAGCGTGGGGCCCTaGAAGAGGCTGGAGGATACTGCGCTGTCACTGAGA +
Preference number: 3 (lower is better)
Translates to: GLYCQVASSVGP*KRLEDTALSLR
Trigger: TCTCAGTGACAGCGCAGTATCCTCCAGCCTCTTCCAGGGCCCCACGCTACTGGCTACCTGGCAATACAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp AATACTCCATGGGAGTTTCAGTGCCCAACGGGCACCTaGCGAGCCTGGTATCTGCTGGGGACCAAGGGCTGT +
Preference number: 3 (lower is better)
Translates to: NTPWEFQCPTGT*RAWYLLGTKGC
Trigger: ACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTGCCCGTTGGGCACTGAAACTCCCATGGAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp TCCTGGCTTACCCTCCGCTGGCCTTCAGGAGGTTTCTaGATGCACCAGGGGCCTAGAGAAGCAGCAACTGCT +
Preference number: 3 (lower is better)
Translates to: SWLTLRWPSGGF*MHQGPREAATA
Trigger: AGCAGTTGCTGCTTCTCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGGCCAGCGGAGGGTAAGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp TCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGGATTTCCTCTGCTTCA +
Preference number: 3 (lower is better)
Translates to: SQKWVQGSWDLG*MGTRFGISSAS
Trigger: TGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp GGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATaGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCT +
Preference number: 3 (lower is better)
Translates to: GCAQSHAHHFFL*PKGSRWTREVP
Trigger: AGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
3UTR CCA 72 bp AGACCCAGCCACAGAAATGCCAGCAAACAACACCCCTaGCTCCCCACATCCCACGGTAAAGCTCCAAACGCT +
Preference number: 3 (lower is better)
Translates to: RPSHRNASKQHP*LPTSHGKAPNA
Trigger: AGCGTTTGGAGCTTTACCGTGGGATGTGGGGAGCCAGGGGTGTTGTTTGCTGGCATTTCTGTGGCTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGGGTGGAGGGCCTCTCTaGGCATCAACCATCCACGAC +
Preference number: 3 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGGGGPL*ASTIHD
Trigger: GTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp GAACCAACTCGCTCAGCTAGTGAAGTGCAATGGACATaGTCTGTTCCTGGCTTACCCTCCGCTGGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: EPTRSASEVQWT*SVPGLPSAGLQ
Trigger: CTGAAGGCCAGCGGAGGGTAAGCCAGGAACAGATCATGTCCATTGCACTTCACTAGCTGAGCGAGTTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 72 bp TCAGAAGGGCAGAACCAACTCGCTCAGCTAGTGAAGTaGAATGGACATGATCTGTTCCTGGCTTACCCTCCG +
Preference number: 3 (lower is better)
Translates to: SEGQNQLAQLVK*NGHDLFLAYPP
Trigger: CGGAGGGTAAGCCAGGAACAGATCATGTCCATTGCACTTCACTAGCTGAGCGAGTTGGTTCTGCCCTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CCA 72 bp CTTGTCCAAGGTCAAGGAGTTGACAAGTGGCTGAGCTaGAGTTCAGCATCTCAGACATCTTCCTTTGAATCC +
Preference number: 3 (lower is better)
Translates to: LVQGQGVDKWLS*SSASQTSSFES
Trigger: GGATTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCCTTGACCTTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp AGTAACTTGTCCAAGGTCAAGGAGTTGACAAGTGGCTaGGCTGGAGTTCAGCATCTCAGACATCTTCCTTTG +
Preference number: 3 (lower is better)
Translates to: SNLSKVKELTSG*AGVQHLRHLPL
Trigger: CAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCCTTGACCTTGGACAAGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: HIGFSRLLYASISNLDLWGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR GCA 72 bp GTCTACACAAGTGAGGTTGGGCTGAGCCCATCATCCTaGAATGTGTTGTTTCATTCAATGGCGTATTTTTGG +
Preference number: 3 (lower is better)
Translates to: VYTSEVGLSPSS*NVLFHSMAYFW
Trigger: CCAAAAATACGCCATTGAATGAAACAACACATTGCAGGATGATGGGCTCAGCCCAACCTCACTTGTGTAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR TCA 72 bp AGATGTCTCAGGCAGCTTGAGTTAATGAATGACAAGTaGGTTACAAACAGCAAACAGCAGGCATCAAGGGAT +
Preference number: 3 (lower is better)
Translates to: RCLRQLELMNDK*VTNSKQQASRD
Trigger: ATCCCTTGATGCCTGCTGTTTGCTGTTTGTAACTCACTTGTCATTCATTAACTCAAGCTGCCTGAGACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634178.1
3UTR CCA 72 bp TCCTGCAATGTGTTGTTTCATTCAATGGCGTATTTTTaGGCTCTGTTGAGGTTGACACACATGGATGCTGTT +
Preference number: 3 (lower is better)
Translates to: SCNVLFHSMAYF*ALLRLTHMDAV
Trigger: AACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACACATTGCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR-3UTR CAA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGTATTTTTGGGCTCTGTaGAGGTTGACACACATGGAT +
Preference number: 3 (lower is better)
Translates to: HIGFSRLLYASISNLDLWYFWAL*RLTHMD
Trigger: ATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATA...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTAGGCGGGCTCAGGCCTaGGCCTCCAGGGCACACACG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPRRAQA*ASRAHT
Trigger: CGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCT...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGTGCGAGCCCCAGCCTaGGCCGGCTTCCCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLVRAPA*AGFPLC
Trigger: ACACAGGGGGAAGCCGGCCCAGGCTGGGGCTCGCAC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCACCGGCGTGCAGGATaGGTGCCTCGCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPHRRAG*VPRCSW
Trigger: CCAGGAGCAGCGAGGCACTCATCCTGCACGCCGGTG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCACGTCGGTGCGCGGCTaGTCCACGATCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLTSVRG*STISPC
Trigger: GCAGGGGGAGATCGTGGAGCAGCCGCGCACCGACGT...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCGAAGGGCCCTACGCTaGGCGGGCTCCGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRRALR*AGSGWS
Trigger: TGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGAACGCAGGGCCAGCTaGCCACTGTGGCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPERRAS*PLWRQL
Trigger: GAGCTGCCGCCACAGTGGGCAGCTGGCCCTGCGTTC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCACAGGTCCCCCACGTaGTTCCGCATGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPHRSPT*FRMRPW
Trigger: CCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGCAGAGGCGCCAGCTaGAGGTGCTCCAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLCRGAS*RCSRTS
Trigger: GCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCA...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGTGGGGGCCCCGGACTaGACTGGGCTAGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLVGAPD*TGLADA
Trigger: TGCATCTGCTAGCCCAGTGCAGTCCGGGGCCCCCAC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLSWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCACCGGCGTGCAGGATaGGTGCCTCGCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWHRRAG*VPRCSW
Trigger: CCAGGAGCAGCGAGGCACTCATCCTGCACGCCGGTG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGAAGGGGACCACAGTaGGGGCGAAGGGCCCTACGC +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGRGPQ*GRRALR
Trigger: GCGTAGGGCCCTTCGCCCTCACTGTGGTCCCCTTCC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCTTGGGGCCACGCACTaGATGGCGGCCACGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLGATH*MAATRL
Trigger: CAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGGCGTGCAGGATGAGTaGCTCGCTGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPGVQDE*LAAPGA
Trigger: AGCACCAGGAGCAGCGAGGCACTCATCCTGCACGCC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGGGTCCGGCTTCTaGTGGGAAGCCAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGPGSGF*WEASHL
Trigger: CAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCCAGG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGCGCCAGGGAGGGCGATaGGCTCCATGGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRRQGGR*APWSQD
Trigger: GTCCTGGGACCATGGAGCCCATCGCCCTCCCTGGCG...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCGCCAGGGAGGGCGATaGGCTCCATGGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWRQGGR*APWSQD
Trigger: GTCCTGGGACCATGGAGCCCATCGCCCTCCCTGGCG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGTGCCCAACGGGCACCTaGCGAGCCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGCPTGT*RAWYLL
Trigger: CAGCAGATACCAGGCTCGTCAGGTGCCCGTTGGGCA...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCTGATGCCAACATaGCTCTGCCCCATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGLLMPT*LCPMGG
Trigger: GCCTCCCATGGGGCAGAGTCATGTTGGCATCAGGAG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGAAAGCCACGTCGGTaGGCGGCTGCTCCACGATCT +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRKPRR*AAAPRS
Trigger: AGATCGTGGAGCAGCCGCGCACCGACGTGGCTTTCT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCACAGGTCCCCCACGTaGTTCCGCATGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWHRSPT*FRMRPW
Trigger: CCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGQQEGC*PGTSEL
Trigger: GAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTCAGCAGGAAGGGTaGTGCCCTGGAACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGLQQEG*CPGTSE
Trigger: CTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGCCACCTTCCCAGGCTaGAAAGGGAACTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLATFPG*KGNWAR
Trigger: CCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPRHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCAGACCTTCTGGGGCTaGCTTCCCTGGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWQTFWG*LPWGAS
Trigger: CGAGGCTCCCCAGGGAAGGCAGCCCCAGAAGGTCTG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGAGGCTCCGCGATGCTTaGGGCCACGCACTGCATGGC +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRRLRDA*GHALHG
Trigger: GCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCT...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGGAGCAAACGCATCTaGACCGCAGCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLWSKRI*TAAQPL
Trigger: CAGAGGCTGGGCTGCGGTCCAGATGCGTTTGCTCCA...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTTGTGCACGCCGTTCTaGTGGTCCTGGAAGGGGACC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPLCTPF*WSWKGT
Trigger: GGTCCCCTTCCAGGACCACCAGAACGGCGTGCACAA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGGGCACCTGGATCAATaGGAACTTCCTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPGHLDQ*ELPVPL
Trigger: CAGGGGCACAGGAAGTTCTCATTGATCCAGGTGCCC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAGCACCGGTGGCAGGGTaGGGCCGCCAGGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRAPVAG*GRQGGR
Trigger: TCGCCCTCCCTGGCGGCCTCACCCTGCCACCGGTGC...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTTGGCAACGCGGGAATaGCTTCCACTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPLATRE*LPLWSH
Trigger: GTGGCTCCACAGTGGAAGTCATTCCCGCGTTGCCAA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTGGGCAGAGAGGTGCTaGTCTGCAGTCTTGGCAACG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPWAERC*SAVLAT
Trigger: CGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCAGGGCCGAGCAGCCTCTaGGGCCACTTCCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAGPSSL*GHFPGS
Trigger: AGAGCCTGGGAAGTGGCCGCAGAGGCTGCTCGGCCC...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438773.4
CDS-3UTR GCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTCAGCAGGAAGGGTaGTGCCCTGGAACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASLQQEG*CPGTSE
Trigger: CTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGTGGCTGTAGTCGCCTaGTTTGTTGCTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLVAVVA*FVALGW
Trigger: CCACCCGAGAGCAACAAAGCAGGCGACTACAGCCAC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGTGGCTGTAGTCGCCTaGTTTGTTGCTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPVAVVA*FVALGW
Trigger: CCACCCGAGAGCAACAAAGCAGGCGACTACAGCCAC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGAGGGTGGCAGCTCCTTaGTGGTGCTGTCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGRVAAP*WCCPRG
Trigger: TCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCT...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGTCCAGGGCACACACGTaGACACTGGGCAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGSRAHT*TLGRQN
Trigger: GTTCTGCCTGCCCAGTGTGCACGTGTGTGCCCTGGA...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCATGTCCGGGGCTTCTaGGTAGCCCAGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLHVRGF*VAQQRC
Trigger: GCATCTTTGCTGGGCTACGCAGAAGCCCCGGACATG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCACGAGCAGCGTCTGGTaGTCCTCAGCACACTGCATG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLTSSVW*SSAHCM
Trigger: CATGCAGTGTGCTGAGGACCACCAGACGCTGCTCGT...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCCCACGACTTTGCGGTaGGTCTGGAAGTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASPTTLR*VWKSPH
Trigger: GTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCCCCAGACTTGTCTGTaGCTCTGTCCAGACGCTTGG +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLPQTCL*LCPDAW
Trigger: CCAAGCGTCTGGACAGAGCCACAGACAAGTCTGGGG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGGGAAGGGTGCTGCCCTaGAACCTCCGAGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWGRVLP*NLRAPL
Trigger: GAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCC...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGGCCGGTGTCTATTaGCTGCTTCAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPLAGVY*LLQQEG
Trigger: CCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCAACTTCCTGTGCCCCTaGCCGGTGTCTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLNFLCP*PVSIGC
Trigger: GCAGCCAATAGACACCGGCCAGGGGCACAGGAAGTT...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCGAGGTAGAAGGTGCTaGAGCCCACGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASRGRRC*SPRRRR
Trigger: CCGTCTCCTTCGTGGGCTCCAGCACCTTCTACCTCG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGGGAGGAGGAGGAGATaGGGCTGCAGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASGRRRR*GCSEGL
Trigger: AAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCC...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGGGAGGAGGAGGAGATaGGGCTGCAGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGGRRRR*GCSEGL
Trigger: AAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCC...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCCAGGTCACAGAAATaGGTGCAGGGATCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPPRSQK*VQGSWD
Trigger: GTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGTGGAGGGCCTCTCTTaGCATCAACCATCCACGACC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPVEGLS*HQPSTT
Trigger: GGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCAC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAGCACCGGTGGCAGGGTaGGGCCGCCAGGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPAPVAG*GRQGGR
Trigger: TCGCCCTCCCTGGCGGCCTCACCCTGCCACCGGTGC...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGCACCGGTGGCAGGGTaGGGCCGCCAGGGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGAPVAG*GRQGGR
Trigger: TCGCCCTCCCTGGCGGCCTCACCCTGCCACCGGTGC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCATGCTCGGTGGAGTTaGAGACATCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGHARWS*RHPGAG
Trigger: ACCTGCTCCTGGATGTCTTCAACTCCACCGAGCATG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGGGCCCTCAACTACGCTaGGGCATCCTGAACGGAAGG +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWGPQLR*GILNGR
Trigger: CCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCC...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGTCCTGCAGCATCCCTaGCTGCAGGCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHVLQHP*LQAQVP
Trigger: GGGGACCTGTGCCTGCAGGCAGGGATGCTGCAGGAC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGCAGCCCAGCCTCTGTaGGTGCCTCTGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASAAQPL*VPLLKS
Trigger: AGATTTCAGCAGAGGCACGCACAGAGGCTGGGCTGC...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCAGCTGCTTGGGGTTTaGAAATTGCCCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPQLLGV*KLPLLP
Trigger: GGGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTACACAGCCAGAAGCCTaGCCCCAGAACAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPTQPEA*PQNRTL
Trigger: AAGAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGT...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGCTCCAGGACGAGCTaGTTCAGGAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLCSRTS*FRSPST
Trigger: TGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCA...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAACGGGGTCGCCCACCTaGCAGGCCGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRTGSPT*QAATAS
Trigger: CGAGGCTGTGGCGGCCTGCCAGGTGGGCGACCCCGT...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGCAGAACCAAGAGGGTaGCAGCTCCTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASAEPRG*QLLAGA
Trigger: AGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGC...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGCAGAACCAAGAGGGTaGCAGCTCCTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGAEPRG*QLLAGA
Trigger: AGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGC...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGGAGGAGGAGGAGATaGGGCTGCAGTGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGRRRR*GCSEGL
Trigger: AAGGCCTTCACTGCAGCCCCATCTCCTCCTCCTCCC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGATGGGCACCCGCTTTaGGATTTCCTCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPDGHPL*DFLCFS
Trigger: GCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGGACCTGGGCTGGATaGGCACCCGCTTTGGGATTT +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGTWAG*APALGF
Trigger: AAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGGCCCCGGACTGCACTaGGCTAGCAGATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHGPGLH*ASRCRE
Trigger: CTCCCTGCATCTGCTAGCCCAGTGCAGTCCGGGGCC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGGGCCCTGGAAGAGGCTaGAGGATACTGCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWGPGRG*RILRCH
Trigger: GTGACAGCGCAGTATCCTCCAGCCTCTTCCAGGGCC...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGGACACGTACAGCCTTaGTGCACGCTTCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLGHVQP*CTLPTQ
Trigger: TTGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGACTCCACTCCGCTGGTaGGCAGCCCCATGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGTPLRW*AAPCFQ
Trigger: TTGAAAACATGGGGCTGCTCACCAGCGGAGTGGAGT...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGTTGGCAACGCGGGAATaGCTTCCACTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLATRE*LPLWSH
Trigger: GTGGCTCCACAGTGGAAGTCATTCCCGCGTTGCCAA...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCATGCTCGGTGGAGTTaGAGACATCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASHARWS*RHPGAG
Trigger: ACCTGCTCCTGGATGTCTTCAACTCCACCGAGCATG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCCGGAGGCCACAGGGTaGCCTTGCTCCCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAPEATG*PCSQRG
Trigger: CCCTCGCTGGGAGCAAGGTCACCCTGTGGCCTCCGG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCTCAGATGACGGAGCATaGCGGCTGCATGATTATGGG +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGSDDGA*RLHDYG
Trigger: CCCATAATCATGCAGCCGTCATGCTCCGTCATCTGA...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCCGGTGTCTATTGGCTaGTTCAGCAGGAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASPVSIG*FSRKGA
Trigger: AGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCGAAGGGCCCTACGCTaGGCGGGCTCCGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGRRALR*AGSGWS
Trigger: TGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCGTCGAGGTAGAAGGTaGTGGAGCCCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWRRGRR*WSPRRR
Trigger: TCTCCTTCGTGGGCTCCAGCACCTTCTACCTCGACG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCAGGCGGGCTCAGGCCTaGGCCTCCAGGGCACACACG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPARRAQA*ASRAHT
Trigger: CGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCGAACGCAGGGCCAGCTaGCCACTGTGGCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLERRAS*PLWRQL
Trigger: GAGCTGCCGCCACAGTGGGCAGCTGGCCCTGCGTTC...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGACTTTGCGGTGGGTCTaGAAGTCACCCCACTCGTTG +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGTLRWV*KSPHSL
Trigger: CAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGT...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTTTGTTGCTCTCGGGTaGGTTCACAGGTTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPFVALG*VHRFAL
Trigger: GAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGTGCTCCAGGACGAGCTaGTTCAGGAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGCSRTS*FRSPST
Trigger: TGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCA...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACGGGGTCGCCCACCTaGCAGGCCGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTGSPT*QAATAS
Trigger: CGAGGCTGTGGCGGCCTGCCAGGTGGGCGACCCCGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGATGCGCGGGCTCCGGTTaGTCAGCCGCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRCAGSG*SAAPPG
Trigger: GCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCA...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTTCGTGGAACCGGATGTaGAGGAAGAAGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASSWNRM*RKKSPV
Trigger: CACGGGAGACTTCTTCCTCCACATCCGGTTCCACGA...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTWVQGS*DLGWMG
Trigger: GCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGTTTGGCCAACTaGCCTTTAGGAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRACLAN*PLGSPA
Trigger: AGCGGGGCTTCCTAAAGGCCAGTTGGCCAAACAGGC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCCAGCGAGGGAGGTTTaGGCCTGGGACTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHPAREV*AWDFRS
Trigger: GGACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGG...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCGGCTTCCCCCTGTGTaGCGCGCGGTCTTGATCCCC +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGRLPPV*RAVLIP
Trigger: GGGGATCAAGACCGCGCGCCACACAGGGGGAAGCCG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCGCGGAAGCCCACTGTaGATCCCTGCGGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHRGSPL*IPAAPP
Trigger: AGGGGGTGCCGCAGGGATCCACAGTGGGCTTCCGCG...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCAGCACGATGAACAGTaGCTCGATGAAGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLQHDEQ*LDEVLD
Trigger: ATCGAGGACTTCATCGAGTCACTGTTCATCGTGCTG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCGATGGGAAGCTTGGTaGAGGGCACCGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLRWEAW*RAPVAG
Trigger: CCCTGCCACCGGTGCCCTTCACCAAGCTTCCCATCG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCGCTGCTCCTGGTGCTaGCGGTCAGCTCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGRCSWC*RSAHAR
Trigger: CCGAGCATGAGCTGACCGTCAGCACCAGGAGCAGCG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCCCTGAACGGAAGGGCTaGAGAGACCGCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLPERKG*RDRPGV
Trigger: GACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGG...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGAAGTGCAATGGACATaGTCTGTTCCTGGCTTACCC +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLEVQWT*SVPGLP
Trigger: GGGTAAGCCAGGAACAGATCATGTCCATTGCACTTC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCACAGGTCCCCCACGTaGTTCCGCATGCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQHRSPT*FRMRPW
Trigger: CCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTGTCCTGCAGCATCCCTaGCTGCAGGCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGVLQHP*LQAQVP
Trigger: GGGGACCTGTGCCTGCAGGCAGGGATGCTGCAGGAC...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGACCCAGGCTCCGCGATaGTTGGGGCCACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQTQAPR*LGPRTA
Trigger: TGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRSRLLC*SRVGSQ
Trigger: CTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACT...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCCTGCCGGGTACTGGTTaGTGGGAGGGTGCTGACTCG +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHALPGTG*WEGADS
Trigger: CGAGTCAGCACCCTCCCAGCAACCAGTACCCGGCAG...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCGCTCTTCCTCCAGCTaGTTGGGGTTTGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASRSSSS*LGFANC
Trigger: GCAATTTGCAAACCCCAAGCAGCTGGAGGAAGAGCG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTAGGCGGGCTCAGGCCTaGGCCTCCAGGGCACACACG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPRRAQA*ASRAHT
Trigger: CGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCCCAGGCCTGGACATTTaGCCACCACGGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLPGLDI*PPRVEG
Trigger: GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGG...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCGTGGGGGCCCCGGACTaGACTGGGCTAGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLVGAPD*TGLADA
Trigger: TGCATCTGCTAGCCCAGTGCAGTCCGGGGCCCCCAC...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCAGGCTCCGCGATGCTTaGGGCCACGCACTGCATGGC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLRLRDA*GHALHG
Trigger: GCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCT...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCACACACCGAAGACCGTaGTATGGTAACCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGTHRRP*YGNRSQ
Trigger: CTGTGAACGGTTACCATACCACGGTCTTCGGTGTGT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTTCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGSWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQRDPGT*AGWAPA
Trigger: AGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTTTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSFAHHG*RASLGI
Trigger: GATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAA...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCTGCCAGCCCAGGCCTaGACATTTGCCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGLPAQA*TFAHHG
Trigger: CCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTGCCAGCCACCTGAGGTaGGGGCTGACGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPASHLR*GLTGWV
Trigger: CACCCAGCCCGTCAGCCCCCACCTCAGGTGGCTGGC...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCGGGTCCGGCTTCTGCTaGGAAGCCAGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASGSGFC*EASHLR
Trigger: CCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCC...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACAGAAACAGCCCAGGTaGCCAGGCCCTCAACTACGC +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAQKQPR*PGPQLR
Trigger: GCGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCTG...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCACAGAAAGGGTGCCCTaGGGGTGGGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLTERVP*GWGRAW
Trigger: CCAGGCCCTTCCCCACCCCCAGGGCACCCTTTCTGT...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTGGGAGTCCCGCACGCTaGTCTGACTCACAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSGSPAR*SDSQSK
Trigger: TTTGCTCTGTGAGTCAGATCAGCGTGCGGGACTCCC...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGACGATGGGAAGCTTGGTaGAGGGCACCGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRRWEAW*RAPVAG
Trigger: CCCTGCCACCGGTGCCCTTCACCAAGCTTCCCATCG...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGAAGAAGGTTGCAATaGATGTGCAGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRRRLQ*MCRSGQ
Trigger: CTGCCCAGATCTGCACATTCATTGCAACCTTCTTCT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGGAAGGGGACCACAGTaGGGGCGAAGGGCCCTACGC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGGRGPQ*GRRALR
Trigger: GCGTAGGGCCCTTCGCCCTCACTGTGGTCCCCTTCC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGAGCAGATGCTGAATaGGCTCCAGGAACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWARADAE*APGTEG
Trigger: GCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCG...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACGTCGGTGCGCGGCTaGTCCACGATCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTSVRG*STISPC
Trigger: GCAGGGGGAGATCGTGGAGCAGCCGCGCACCGACGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGQQEGC*PGTSEL
Trigger: GAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCCGGGGCCGAACGACCTaGCGAAAAGGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASRGRTT*RKGLDR
Trigger: CCTGTCCAGTCCTTTTCGGCAGGTCGTTCGGCCCCG...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCTGACGGTCAGCTCATaGTCGGTGGAGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLTVSS*SVELKT
Trigger: TGTCTTCAACTCCACCGAGCATGAGCTGACCGTCAG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGGCGTGCAGGATGAGTaGCTCGCTGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGGVQDE*LAAPGA
Trigger: AGCACCAGGAGCAGCGAGGCACTCATCCTGCACGCC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCTGGCACTCACCGGCGTaGAGGATGAGTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLWHSPA*RMSASL
Trigger: CAGCGAGGCACTCATCCTGCACGCCGGTGAGTGCCA...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCACCAGCACATCCCACTaGAGAGGCGCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLTSTSH*RGASCR
Trigger: CCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGT...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGCGAAGGGCCCTACGCTaGGCGGGCTCCGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGRRALR*AGSGWS
Trigger: TGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCG...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCGCAGCTCCTTGCTGGTaGTGTCCTCGTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHAAAPCW*CPRGTG
Trigger: TCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGC...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCTCCAGGGCACACACGTaGACACTGGGCAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHASRAHT*TLGRQN
Trigger: GTTCTGCCTGCCCAGTGTGCACGTGTGTGCCCTGGA...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGTAGCCCAGCAAAGATaGTACAGGAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRVAQQR*YRRNRR
Trigger: CCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTAC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCGAGGGAGGTCCCTCTaGTGGGATGAGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSARGRSL*WDEQHS
Trigger: GCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTCG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGTGATCTCCCTCCCCTaGAGGCCTCCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHVISLP*RPPSTS
Trigger: GGAGGTGGAAGGAGGCCTGCAGGGGAGGGAGATCAC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGGTCTCCACCCCCTACTaGAGCCAGACCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSAVSTPY*SQTFWG
Trigger: GCCCCAGAAGGTCTGGCTGCAGTAGGGGGTGGAGAC...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCGGGAGGCACGTGAGGTaGGAGCCCCAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAGRHVR*EPQPGP
Trigger: CGGCCCAGGCTGGGGCTCGCACCTCACGTGCCTCCC...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR CCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCACCACGAGCAGCGTCTaGTGGTCCTCAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHATTSSV*WSSAHC
Trigger: GCAGTGTGCTGAGGACCACCAGACGCTGCTCGTGGT...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCACGATGCCCACAGGCTaGACCACCACGAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLTMPTG*TTTSSV
Trigger: GACGCTGCTCGTGGTGGTCCAGCCTGTGGGCATCGT...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAGGCTCCGCGATGCTTaGGGCCACGCACTGCATGGC +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEERLRDA*GHALHG
Trigger: GCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCT...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGTGGTCCCAGGACACTTaGACGTATAGTTCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGWSQDT*TYSSLG
Trigger: GCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCA...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCCCGACGAGCGTCACTaGGTACAGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHPDERH*VQTRFS
Trigger: GCTGAATCTGGTCTGTACCCAGTGACGCTCGTCGGG...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCATGCCCAGCTTGCTGTaGATCTCCAGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHAMPSLL*ISRPRA
Trigger: AGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCAT...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAATCCTGGGACCTGGGCTaGATGGGCACCCGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEESWDLG*MGTRFG
Trigger: CCCAAAGCGGGTGCCCATCCAGCCCAGGTCCCAGGA...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTAAGGCCCAGGGAGGGTaGGAAGCTGCCCACGCCCTC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPKAQGG*EAAHAL
Trigger: GAGGGCGTGGGCAGCTTCCCACCCTCCCTGGGCCTT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCGAACCCGTCCCTTCCTaGGTCCGGCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASEPVPS*VRLLLG
Trigger: TCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTC...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGTCCCCCAATACTCCATaGGAGTTTCAGTGCCCAACG +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRSPNTP*EFQCPT
Trigger: CGTTGGGCACTGAAACTCCCATGGAGTATTGGGGGA...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTTCCCGCACGCTGATCTaGCTCACAGAGCAAATCCTC +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSSRTLI*LTEQIL
Trigger: GAGGATTTGCTCTGTGAGTCAGATCAGCGTGCGGGA...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACTGGCGGCCACGCGCTTaGAGAACGCAGACTTGCGAT +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHWRPRA*RTQTCD
Trigger: ATCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCA...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCATGTGCGTGCCTCTGCTaGAATCTTTGGGATCCAGCG +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWACACLC*NLWDPA
Trigger: CGCTGGATCCCAAAGATTTCAGCAGAGGCACGCACA...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCTGGGCAGAGAGGTGCTaGTCTGCAGTCTTGGCAACG +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHAWAERC*SAVLAT
Trigger: CGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCA...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGCCCCGCAGGCCTCCTaGTGCCAACATGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGAPQAS*CQHDSA
Trigger: GGCAGAGTCATGTTGGCATCAGGAGGCCTGCGGGGC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGCTCCCATCATTCACTaGGCGACAACAGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTAPIIH*ATTGGH
Trigger: GTGGCCTCCTGTTGTCGCTCAGTGAATGATGGGAGC...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGCCTGAACGGAAGGGCTaGAGAGACCGCCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMPERKG*RDRPGV
Trigger: GACCCCAGGGCGGTCTCTTCAGCCCTTCCGTTCAGG...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGCCAGCACCCTCATGCTaGCATCAGATGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRPAPSC*HQMSNA
Trigger: TGCATTTGACATCTGATGTCAGCATGAGGGTGCTGG...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACTTGCCTCCTGCCCCTTaGGGTTCTTCCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHLPPAP*GSSFLW
Trigger: CCACAAGAAGGAAGAACCTCAAGGGGCAGGAGGCAA...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTATACTGCGCTGTCACTaGGACACCTGCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGILRCH*DTCPRS
Trigger: GGACCTGGGGCAGGTGTCTCAGTGACAGCGCAGTAT...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCATACTGCGCTGTCACTaGGACACCTGCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLILRCH*DTCPRS
Trigger: GGACCTGGGGCAGGTGTCTCAGTGACAGCGCAGTAT...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGAGCATGACGGCTGCATaGTTATGGGGTCACCGGGCC +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQSMTAA*LWGHRA
Trigger: GGCCCGGTGACCCCATAATCATGCAGCCGTCATGCT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGCTTGTGAATTTCAGATaGCGGAGCATGACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRLVNFR*RSMTAA
Trigger: TGCAGCCGTCATGCTCCGTCATCTGAAATTCACAAG...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTTCCTTGCCTTCCTTGTaGATTTCAGATGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASSLPSL*ISDDGA
Trigger: TGCTCCGTCATCTGAAATTCACAAGGAAGGCAAGGA...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGTGGCGCGCGGTCTTaGTCCCCAGCTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPCGARS*SPAGTM
Trigger: CATGGTGCCAGCTGGGGATCAAGACCGCGCGCCACA...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACATTTCACTTCCTCTGTaGAGCTCAGGGGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHISLPL*SSGVEA
Trigger: GGCCTCCACCCCTGAGCTTCACAGAGGAAGTGAAAT...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR GCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGTCTCCTCGGAGACGATaGCCACAGGCTGGACCACCA +
Preference number: 4 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWSPRRR*PQAGPP
Trigger: TGGTGGTCCAGCCTGTGGGCATCGTCTCCGAGGAGA...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCCTTCAGCAGGAAGGGTaGTGCCCTGGAACCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLLQQEG*CPGTSE
Trigger: CTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAG...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCATCGTTCCAGTCGTCTaGGGGACCCCGACGAGCGTC +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAIVPVV*GTPTSV
Trigger: GACGCTCGTCGGGGTCCCGCAGACGACTGGAACGAT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACGGGGCCGAACGACCTaGCGAAAAGGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEERGRTT*RKGLDR
Trigger: CCTGTCCAGTCCTTTTCGGCAGGTCGTTCGGCCCCG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAATGGCACTCACCGGCGTaGAGGATGAGTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEWHSPA*RMSASL
Trigger: CAGCGAGGCACTCATCCTGCACGCCGGTGAGTGCCA...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCACCAGCACATCCCACTaGAGAGGCGCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPATSTSH*RGASCR
Trigger: CCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCCGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASRHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACACACAGCCAGAAGCCTaGCCCCAGAACAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHTQPEA*PQNRTL
Trigger: AAGAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGT...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCGCCACTTCCTGGCTCTaGCTGTTTGGCCAACTGGCC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLATSWL*LFGQLA
Trigger: GGCCAGTTGGCCAAACAGGCAGAGCCAGGAAGTGGC...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATCAGACCTTCTGGGGCTaGCTTCCCTGGGGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDQTFWG*LPWGAS
Trigger: CGAGGCTCCCCAGGGAAGGCAGCCCCAGAAGGTCTG...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTACCACGAGCAGCGTCTaGTGGTCCTCAGCACACTGC +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGTTSSV*WSSAHC
Trigger: GCAGTGTGCTGAGGACCACCAGACGCTGCTCGTGGT...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACTCGTTGTTCTCGGGTaGGTAGTGGTGCCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTLVVLG*VVVPVA
Trigger: CGCTACAGGCACCACTACCCACCCGAGAACAACGAG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCCCACGACTTTGCGGTaGGTCTGGAAGTCACCCCAC +
Preference number: 4 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSAPTTLR*VWKSPH
Trigger: GTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGTGGTCCCAGGACACTTaGACGTATAGTTCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: AASPGLDICPPRVEGLSWWSQDT*TYSSLG
Trigger: GCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCA...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCAGGCTGCAAAGGGAACTaGGCAAGGGTTTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAGCKGN*ARVSSS
Trigger: GCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCC...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTCCTGCCGAAAAGGACTaGACAGGGGAAAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSPAEKD*TGESHS
Trigger: TGAGTGGCTTTCCCCTGTCCAGTCCTTTTCGGCAGG...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGATGCCCAGCTTGCTGTaGATCTCCAGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQMPSLL*ISRPRA
Trigger: AGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCAT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGACGGGGTCGCCCACCTaGCAGGCCGCCACAGCCTCG +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGTGSPT*QAATAS
Trigger: CGAGGCTGTGGCGGCCTGCCAGGTGGGCGACCCCGT...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGATGCGCGGGCTCCGGTTaGTCAGCCGCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGCAGSG*SAAPPG
Trigger: GCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCA...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCCGTTCTGGTGGTCCTaGAAGGGGACCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQPFWWS*KGTTVR
Trigger: CCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCTTGTGCACGCCGTTCTaGTGGTCCTGGAAGGGGACC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLLCTPF*WSWKGT
Trigger: GGTCCCCTTCCAGGACCACCAGAACGGCGTGCACAA...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSAPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATCTGCCAGCCCAGGCCTaGACATTTGCCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDLPAQA*TFAHHG
Trigger: CCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAG...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACTGAAGAGACCGCCCTaGGGTCTCCACCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEELKRPP*GLHPLL
Trigger: CAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACAGAAAGGGTGCCCTaGGGGTGGGGAAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTERVP*GWGRAW
Trigger: CCAGGCCCTTCCCCACCCCCAGGGCACCCTTTCTGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCGGCCCTGGAAGAGGCTaGAGGATACTGCGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASGPGRG*RILRCH
Trigger: GTGACAGCGCAGTATCCTCCAGCCTCTTCCAGGGCC...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCAGTAGCGTGGGGCCCTaGAAGAGGCTGGAGGATACT +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHASSVGP*KRLEDT
Trigger: AGTATCCTCCAGCCTCTTCCAGGGCCCCACGCTACT...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCGTTCCAGGAGAAGAATaGAATTTCAGGCACATGGCA +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGVPGEE*NFRHMA
Trigger: TGCCATGTGCCTGAAATTCCATTCTTCTCCTGGAAC...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCGTTCCAGGAGAAGAATaGAATTTCAGGCACATGGCA +
Preference number: 4 (lower is better)
Translates to: PWAASPGLDICPPRVEGLVPGEE*NFRHMA
Trigger: TGCCATGTGCCTGAAATTCCATTCTTCTCCTGGAAC...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTGTCTTGATCCCCAGCTaGCACCATGGCACTCCCGAC +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGVLIPS*HHGTPD
Trigger: GTCGGGAGTGCCATGGTGCCAGCTGGGGATCAAGAC...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648948.2
3UTR CAA 72 bp CCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTaGGCATCAACCATCCACGACCTCCTACGGCACCAT +
Preference number: 4 (lower is better)
Translates to: PGHLPTTGGGPL*ASTIHDLLRHH
Trigger: ATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCAGGACACGTACAGCCTTaGTGCACGCTTCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAGHVQP*CTLPTQ
Trigger: TTGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCC...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGEMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLEMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGLSGPP*GTQGQL
Trigger: CAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGCCCCGCAGGCCTCCTaGTGCCAACATGACTCTGCC +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLAPQAS*CQHDSA
Trigger: GGCAGAGTCATGTTGGCATCAGGAGGCCTGCGGGGC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACAAGTGAGGTTGGGCTaGGCCCATCATCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTQVRLG*AHHPAM
Trigger: CATTGCAGGATGATGGGCTCAGCCCAACCTCACTTG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCTCCTCGGAGACGATaGCCACAGGCTGGACCACCA +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPASPRRR*PQAGPP
Trigger: TGGTGGTCCAGCCTGTGGGCATCGTCTCCGAGGAGA...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPQQEGC*PGTSEL
Trigger: GAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGATCGTTCCAGTCGTCTaGGGGACCCCGACGAGCGTC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGIVPVV*GTPTSV
Trigger: GACGCTCGTCGGGGTCCCGCAGACGACTGGAACGAT...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCTCACCAGAAGAAGGTTaGAATGAATGTGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: QPWAASPGLDICPPRVEGSPEEG*NECADL
Trigger: CAGATCTGCACATTCATTGCAACCTTCTTCTGGTGA...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGTGGGTTCACAGGTTTaGCCTCCACTCGGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEVGSQV*PPLGAE
Trigger: TTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCAC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTSRLLC*SRVGSQ
Trigger: CTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACT...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATCTGCCGGGTACTGGTTaGTGGGAGGGTGCTGACTCG +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDLPGTG*WEGADS
Trigger: CGAGTCAGCACCCTCCCAGCAACCAGTACCCGGCAG...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTCTGACGGTCAGCTCATaGTCGGTGGAGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSLTVSS*SVELKT
Trigger: TGTCTTCAACTCCACCGAGCATGAGCTGACCGTCAG...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACAGCTGCTTGGGGTTTaGAAATTGCCCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTQLLGV*KLPLLP
Trigger: GGGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACCAGCACATCCCACTaGAGAGGCGCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTSTSH*RGASCR
Trigger: CCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCGTCGAGGTAGAAGGTaGTGGAGCCCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGRRGRR*WSPRRR
Trigger: TCTCCTTCGTGGGCTCCAGCACCTTCTACCTCGACG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCAGGGTGGCAGCTCCTTaGTGGTGCTGTCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPARVAAP*WCCPRG
Trigger: TCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCATGTCCGGGGCTTCTaGGTAGCCCAGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGHVRGF*VAQQRC
Trigger: GCATCTTTGCTGGGCTACGCAGAAGCCCCGGACATG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTGTGATCTCCCTCCCCTaGAGGCCTCCTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPVISLP*RPPSTS
Trigger: GGAGGTGGAAGGAGGCCTGCAGGGGAGGGAGATCAC...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCACGGAGCATGACGGCTaGATGATTATGGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHATEHDG*MIMGSP
Trigger: CGGTGACCCCATAATCATGCAGCCGTCATGCTCCGT...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGGAAGGGTGCTGCCCTaGAACCTCCGAGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMGRVLP*NLRAPL
Trigger: GAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCTGGCCGGTGTCTATTaGCTGCTTCAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLLAGVY*LLQQEG
Trigger: CCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCCCGACGAGCGTCACTaGGTACAGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGPDERH*VQTRFS
Trigger: GCTGAATCTGGTCTGTACCCAGTGACGCTCGTCGGG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCAGCTGATCTGCAGTCTTaGCAACGCGGGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAADLQS*QRGNDF
Trigger: GAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGC...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCCGTTCTGGTGGTCCTaGAAGGGGACCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAPFWWS*KGTTVR
Trigger: CCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGCCTCCTTCCACCTCCCAGACAAGCTGCTGGTGACCAGATTCCTGTCTCAGCGCTGGTGCTGTCCTCGTaGAACCGGATGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLLPPPRQAAGDQIPVSALVLSS*NRMWRK
Trigger: CTTCCTCCACATCCGGTTCCACGAGGACAGCACCAG...CGCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTGGGAGGTGGAAGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCGTGGAGGGCCTCTCTTaGCATCAACCATCCACGACC +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLVEGLS*HQPSTT
Trigger: GGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCAC...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGAACCCGTCCCTTCCTaGGTCCGGCTTCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMEPVPS*VRLLLG
Trigger: TCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLILPGT*GAKGQH
Trigger: GTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGAT...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGATCCTCCCTGGGACCTaGGGAGCTAAGGGTCAACAC +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQILPGT*GAKGQH
Trigger: GTGTTGACCCTTAGCTCCCCAGGTCCCAGGGAGGAT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTAGGGAGGTTTGGGCCTaGGACTTCAGGTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGREVWA*DFRSSG
Trigger: TCCTGAGGACCTGAAGTCCCAGGCCCAAACCTCCCT...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCAGTAGCGTGGGGCCCTaGAAGAGGCTGGAGGATACT +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASSSVGP*KRLEDT
Trigger: AGTATCCTCCAGCCTCTTCCAGGGCCCCACGCTACT...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTTCCCGCACGCTGATCTaGCTCACAGAGCAAATCCTC +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGSRTLI*LTEQIL
Trigger: GAGGATTTGCTCTGTGAGTCAGATCAGCGTGCGGGA...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCAGCACGATGAACAGTaGCTCGATGAAGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHQHDEQ*LDEVLD
Trigger: ATCGAGGACTTCATCGAGTCACTGTTCATCGTGCTG...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTGTGCGTGCCTCTGCTaGAATCTTTGGGATCCAGCG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQCACLC*NLWDPA
Trigger: CGCTGGATCCCAAAGATTTCAGCAGAGGCACGCACA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAACATCCAGGAGCAGGTaGCACTGCCGGGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRTSRSR*HCRVLV
Trigger: AACCAGTACCCGGCAGTGTCACCTGCTCCTGGATGT...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGGGAAGGGGACCACAGTaGGGGCGAAGGGCCCTACGC +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGGRGPQ*GRRALR
Trigger: GCGTAGGGCCCTTCGCCCTCACTGTGGTCCCCTTCC...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAGAGATGGGGCTGCAGTaGAGGCCTTGCTCATTGCAG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRREMGLQ*RPCSLQ
Trigger: CTGCAATGAGCAAGGCCTTCACTGCAGCCCCATCTC...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCCAGACAAGCTGCTGGTaGCCAGATTCCTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASQTSCW*PDSCLS
Trigger: GCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTG...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGCTCCTGATGCCAACATaGCTCTGCCCCATGGGAGGC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMLLMPT*LCPMGG
Trigger: GCCTCCCATGGGGCAGAGTCATGTTGGCATCAGGAG...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACTACGCTGAGGCATCCTaGACGGAAGGGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHYAEAS*TEGLKR
Trigger: TCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTA...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTTTGCCTCCTGCCCCTTaGGGTTCTTCCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGLPPAP*GSSFLW
Trigger: CCACAAGAAGGAAGAACCTCAAGGGGCAGGAGGCAA...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCAGGGACGCTCATTTTaGAGTCCCAGTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQQGRSF*SPSPSG
Trigger: CCCTGAAGGACTGGGACTTCAAAATGAGCGTCCCTG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR GCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGATCCACGATCTCCCCCTaGAGCCCGAAGACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRSTISP*SPKTKS
Trigger: GCTCTTTGTCTTCGGGCTGCAGGGGGAGATCGTGGA...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACTTGGGGCCACGCACTaGATGGCGGCCACGCGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRLGATH*MAATRL
Trigger: CAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGCAGCCCAGCCTCTGTaGGTGCCTCTGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEAAQPL*VPLLKS
Trigger: AGATTTCAGCAGAGGCACGCACAGAGGCTGGGCTGC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAGCAGCCCAGCCTCTGTaGGTGCCTCTGCTGAAATCT +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRAAQPL*VPLLKS
Trigger: AGATTTCAGCAGAGGCACGCACAGAGGCTGGGCTGC...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGAGAGAGGTGCTGATCTaGAGTCTTGGCAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQREVLI*SLGNAG
Trigger: TCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGCCACCTTCCCAGGCTaGAAAGGGAACTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGATFPG*KGNWAR
Trigger: CCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTCGGGGCCGAACGACCTaGCGAAAAGGACTGGACAGG +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLRGRTT*RKGLDR
Trigger: CCTGTCCAGTCCTTTTCGGCAGGTCGTTCGGCCCCG...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGGCGCCAGCTGCAGGTaGTCCAGGACGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGGASCR*SRTSWF
Trigger: GAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGATGCAGAGGCGCCAGCTaGAGGTGCTCCAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGCRGAS*RCSRTS
Trigger: GCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCA...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCGTCGAGGTAGAAGGTaGTGGAGCCCACGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPARRGRR*WSPRRR
Trigger: TCTCCTTCGTGGGCTCCAGCACCTTCTACCTCGACG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTCCAGGGCACACACGTaGACACTGGGCAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSRAHT*TLGRQN
Trigger: GTTCTGCCTGCCCAGTGTGCACGTGTGTGCCCTGGA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACCAGGCCTGGACATTTaGCCACCACGGGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGPGLDI*PPRVEG
Trigger: GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACTTCCTGGCTCTaGCTGTTTGGCCAACTGGCC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMATSWL*LFGQLA
Trigger: GGCCAGTTGGCCAAACAGGCAGAGCCAGGAAGTGGC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTAGTCACCAATATGCTTaGCACTCAGAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPSHQYA*HSESNT
Trigger: AGTGTTTGATTCTGAGTGGCAAGCATATTGGTGACT...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCAAGAAGACAACTTTaGCTCCTGCCCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAPRRQL*LLPLEV
Trigger: AACCTCAAGGGGCAGGAGGCAAAGTTGTCTTCTTGG...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCACGAGCAGCGTCTGGTaGTCCTCAGCACACTGCATG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPATSSVW*SSAHCM
Trigger: CATGCAGTGTGCTGAGGACCACCAGACGCTGCTCGT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCTGGAGCAAACGCATCTaGACCGCAGCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGWSKRI*TAAQPL
Trigger: CAGAGGCTGGGCTGCGGTCCAGATGCGTTTGCTCCA...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCATGGAGCAAACGCATCTaGACCGCAGCCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPWSKRI*TAAQPL
Trigger: CAGAGGCTGGGCTGCGGTCCAGATGCGTTTGCTCCA...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGCTGATCTGCAGTCTTaGCAACGCGGGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTADLQS*QRGNDF
Trigger: GAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGC...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGTTGTGCACGCCGTTCTaGTGGTCCTGGAAGGGGACC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMLCTPF*WSWKGT
Trigger: GGTCCCCTTCCAGGACCACCAGAACGGCGTGCACAA...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCGAGGTAGAAGGTGCTaGAGCCCACGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGRGRRC*SPRRRR
Trigger: CCGTCTCCTTCGTGGGCTCCAGCACCTTCTACCTCG...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACTGGTGCTGTCCTCGTaGAACCGGATGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEELVLSS*NRMWRK
Trigger: CTTCCTCCACATCCGGTTCCACGAGGACAGCACCAG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTAGGCAGGGTCACCTCTaGCCCTGCAGAAAGAGGGAC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPRQGHL*PCRKRD
Trigger: GTCCCTCTTTCTGCAGGGCCAGAGGTGACCCTGCCT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGGGACCTGGGCTGGATaGGCACCCGCTTTGGGATTT +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGGTWAG*APALGF
Trigger: AAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGGGTCCGGCTTCTGCTaGGAAGCCAGCCACCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGGSGFC*EASHLR
Trigger: CCTCAGGTGGCTGGCTTCCCAGCAGAAGCCGGACCC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAGGGCAGCCACTTCCTaGCTCTGCCTGTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEERAATS*LCLFGQ
Trigger: TTGGCCAAACAGGCAGAGCCAGGAAGTGGCTGCCCT...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAAGGGCAGCCACTTCCTaGCTCTGCCTGTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRRAATS*LCLFGQ
Trigger: TTGGCCAAACAGGCAGAGCCAGGAAGTGGCTGCCCT...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGACATGATCTGTTCCTaGCTTACCCTCCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGDMICS*LTLRWP
Trigger: AGGCCAGCGGAGGGTAAGCCAGGAACAGATCATGTC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGTGGTGAGGGCACCTaGCCGGTGTCTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLGGEGT*PVSIGC
Trigger: GCAGCCAATAGACACCGGCCAGGTGCCCTCACCACC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520857.5
CDS-3UTR TCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGCGATGGGAAGCTTGGTaGAGGGCACCGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGRWEAW*RAPVAG
Trigger: CCCTGCCACCGGTGCCCTTCACCAAGCTTCCCATCG...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTTGGCAACGCGGGAATaGCTTCCACTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPLATRE*LPLWSH
Trigger: GTGGCTCCACAGTGGAAGTCATTCCCGCGTTGCCAA...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGTGGGCAGAGAGGTGCTaGTCTGCAGTCTTGGCAACG +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMWAERC*SAVLAT
Trigger: CGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCA...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACATCCAGGAGCAGGTaGCACTGCCGGGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTSRSR*HCRVLV
Trigger: AACCAGTACCCGGCAGTGTCACCTGCTCCTGGATGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTCGCTGCTCCTGGTGCTaGCGGTCAGCTCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVARCSWC*RSAHAR
Trigger: CCGAGCATGAGCTGACCGTCAGCACCAGGAGCAGCG...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTCAGATGACGGAGCATaGCGGCTGCATGATTATGGG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQSDDGA*RLHDYG
Trigger: CCCATAATCATGCAGCCGTCATGCTCCGTCATCTGA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTCCACGATCTCCCCCTaGAGCCCGAAGACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSTISP*SPKTKS
Trigger: GCTCTTTGTCTTCGGGCTGCAGGGGGAGATCGTGGA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACCGGTGTCTATTGGCTaGTTCAGCAGGAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEPVSIG*FSRKGA
Trigger: AGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTGCTCCGTTTCTGAATTaGAAGGACACGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSAPFLN*KDTYSL
Trigger: AAGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGC...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTACCCAGGCTCCGCGATaGTTGGGGCCACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVATQAPR*LGPRTA
Trigger: TGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGT...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGTGGGTTCACAGGTTTaGCCTCCACTCGGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLVGSQV*PPLGAE
Trigger: TTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCAC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGTGGCTGTAGTCGCCTaGTTTGTTGCTCTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGVAVVA*FVALGW
Trigger: CCACCCGAGAGCAACAAAGCAGGCGACTACAGCCAC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGGCGTGCAGGATGAGTaGCTCGCTGCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGGVQDE*LAAPGA
Trigger: AGCACCAGGAGCAGCGAGGCACTCATCCTGCACGCC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCGCTCTTCCTCCAGCTaGTTGGGGTTTGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHRSSSS*LGFANC
Trigger: GCAATTTGCAAACCCCAAGCAGCTGGAGGAAGAGCG...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTTGCAGAGGCGCCAGCTaGAGGTGCTCCAGGACGAGC +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVACRGAS*RCSRTS
Trigger: GCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCA...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGCAGCTCCTTGCTGGTaGTGTCCTCGTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLAAPCW*CPRGTG
Trigger: TCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 4 (lower is better)
Translates to: APGHRNGCRDPGTWAGWALWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHLWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCACCCAGCCACAGAAATaGCAGCAAACAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLTQPQK*QQTTPL
Trigger: CAGGGGTGTTGTTTGCTGGCATTTCTGTGGCTGGGT...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTACTGCTGGACTGTATTaGCAGGTAGCCAGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGTAGLY*QVASSV
Trigger: CACGCTACTGGCTACCTGGCAATACAGTCCAGCAGT...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCGGGAGTCATACAGTGTaGAGCCGTAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHAGSHTV*SRRSPS
Trigger: AGAAGGAGATCTACGGCTCCACACTGTATGACTCCC...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGGCAGTCCTCGTAGTTaGGGTAGAAAGCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGGSPRS*GRKPRR
Trigger: CCGACGTGGCTTTCTACCCCAACTACGAGGACTGCC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCGGAAGGGTGCTGCCCTaGAACCTCCGAGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAGRVLP*NLRAPL
Trigger: GAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCC...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAACTTCCTGTGCCCCTaGCCGGTGTCTATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDNFLCP*PVSIGC
Trigger: GCAGCCAATAGACACCGGCCAGGGGCACAGGAAGTT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGGTGGTGAGGGCACCTaGATCAATGAGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHGGEGT*INENFL
Trigger: CAGGAAGTTCTCATTGATCCAGGTGCCCTCACCACC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTAAGTTCAAACGGCATTaGGTTATATACCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASKFKRH*VIYHQL
Trigger: CAGCTGATGGTATATAACCCAATGCCGTTTGAACTT...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGAAGTTCAAACGGCATTaGGTTATATACCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGKFKRH*VIYHQL
Trigger: CAGCTGATGGTATATAACCCAATGCCGTTTGAACTT...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCCCACTGTGGAGCCACTaGTTTTTATTCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLPLWSH*FLFPAG
Trigger: ACCTGCCGGGAATAAAAACCAGTGGCTCCACAGTGG...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGGCTGCAAAGGGAACTaGGCAAGGGTTTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEGCKGN*ARVSSS
Trigger: GCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTTGCACGCCGTTCTGGTaGTCCTGGAAGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLCTPFW*SWKGTT
Trigger: TGTGGTCCCCTTCCAGGACCACCAGAACGGCGTGCA...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGCAGAACCAAGAGGGTaGCAGCTCCTTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGAEPRG*QLLAGA
Trigger: AGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGATGGGCACCCGCTTTaGGATTTCCTCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPADGHPL*DFLCFS
Trigger: GCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAAGGGATCCTGGGACCTaGGCTGGATGGGCACCCGCT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRRDPGT*AGWAPA
Trigger: AGCGGGTGCCCATCCAGCCCAGGTCCCAGGATCCCT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGCTGCCAGCCCAGGCCTaGACATTTGCCCACCACGGG +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGLPAQA*TFAHHG
Trigger: CCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAG...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGCCAGCCACCTGAGGTaGGGGCTGACGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRASHLR*GLTGWV
Trigger: CACCCAGCCCGTCAGCCCCCACCTCAGGTGGCTGGC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGAGCCTGGTATCTGCTaGGGACCAAGGGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGEPGIC*GPRAVY
Trigger: ATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAGGTCACCTTCTCTACTaGGACAGAAAGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRGHLLY*DRKGAL
Trigger: CAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACC...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAGCAAACAACACCCCTaGCTCCCCACATCCCACGGT +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDSKQHP*LPTSHG
Trigger: ACCGTGGGATGTGGGGAGCCAGGGGTGTTGTTTGCT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCGGAGCATAGCAATGTaGCCTGTTAAGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLRSIAM*PVKGSR
Trigger: CCTGGAACCCTTAACAGGCCACATTGCTATGCTCCG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGATGGCGGCCACGCGCTTaGAGAACGCAGACTTGCGAT +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGWRPRA*RTQTCD
Trigger: ATCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCA...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACTTGGTTGACACGTTCTaGCCCAGCAAGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHLVDTF*PSKLFI
Trigger: AATGAAAAGCTTGCTGGGTCAGAACGTGTCAACCAA...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACTCCACTCCGCTGGTaGGCAGCCCCATGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTPLRW*AAPCFQ
Trigger: TTGAAAACATGGGGCTGCTCACCAGCGGAGTGGAGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACCAGCAAACAGTCACTaGACACACCGAAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPPANSH*THRRPW
Trigger: CCACGGTCTTCGGTGTGTTCAGTGACTGTTTGCTGG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATTGAACTTGTCCACTTaGATAGCCATTCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTLNLST*IAIRWH
Trigger: GTGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACAGGCAGGCCATTTATTaGAGAACTGCTTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHRQAIY*RTACRH
Trigger: ATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCT...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCTCTCCGGTCCTCCCTaGGGAACGCAGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRLSGPP*GTQGQL
Trigger: CAGCTGGCCCTGCGTTCCTCAGGGAGGACCGGAGAG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCCCTCAAGGGAGATGTaGGCCGTGTGCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPPSREM*AVCFLS
Trigger: AGAGAGAAAGCACACGGCTCACATCTCCCTTGAGGG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCGGAGGCCACAGGGTaGCCTTGCTCCCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTPEATG*PCSQRG
Trigger: CCCTCGCTGGGAGCAAGGTCACCCTGTGGCCTCCGG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCCCAGCACCCTCATGCTaGCATCAGATGTCAAATGCA +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLPAPSC*HQMSNA
Trigger: TGCATTTGACATCTGATGTCAGCATGAGGGTGCTGG...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGCCTTCAGGAGGTTTCTaGATGCACCAGGGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGPSGGF*MHQGPR
Trigger: TCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGG...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATCCTTGCCTTCCTTGTaGATTTCAGATGACGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTSLPSL*ISDDGA
Trigger: TGCTCCGTCATCTGAAATTCACAAGGAAGGCAAGGA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGAAAGCCACGTCGGTaGGCGGCTGCTCCACGATCT +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGRKPRR*AAAPRS
Trigger: AGATCGTGGAGCAGCCGCGCACCGACGTGGCTTTCT...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACCACGTGCTTCCGCATaGGGCCTTGGCACCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRPRASA*GLGTAS
Trigger: AGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCAATGAGAACTTCCTGTaGCCCTGGCCGGTGTCTATT +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASNENFL*PWPVSI
Trigger: AATAGACACCGGCCAGGGGCACAGGAAGTTCTCATT...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCTTGGGGCCACGCACTaGATGGCGGCCACGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRLGATH*MAATRL
Trigger: CAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAGAGAGGTGCTGATCTaGAGTCTTGGCAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDREVLI*SLGNAG
Trigger: TCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCAGAGAGGTGCTGATCTaGAGTCTTGGCAACGCGGGA +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGREVLI*SLGNAG
Trigger: TCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCT...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTCATCACTGAGATCCTaGAGGAGATTCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQSSLRS*RRFSWQ
Trigger: CTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGTGGGTTCACAGGTTTaGCCTCCACTCGGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGVGSQV*PPLGAE
Trigger: TTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCAC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACAGCTGCTTGGGGTTTaGAAATTGCCCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPQLLGV*KLPLLP
Trigger: GGGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCGCTCTTCCTCCAGCTaGTTGGGGTTTGCAAATTGC +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPARSSSS*LGFANC
Trigger: GCAATTTGCAAACCCCAAGCAGCTGGAGGAAGAGCG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGCAGCTCCTTGCTGGTaGTGTCCTCGTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGAAPCW*CPRGTG
Trigger: TCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGGGTGGCAGCTCCTTaGTGGTGCTGTCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGRVAAP*WCCPRG
Trigger: TCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCT...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTCGAGGGAGGTCCCTCTaGTGGGATGAGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVARGRSL*WDEQHS
Trigger: GCTGTGCTGCTCATCCCAGCAGAGGGACCTCCCTCG...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGACGAGCCTGGTATCTaGTGGGGACCAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLDEPGI*WGPRAV
Trigger: AACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCCACCACATCACAGTGTaGTCCCATCATTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASHHITV*SHHSLS
Trigger: GCTCAGTGAATGATGGGAGCACACTGTGATGTGGTG...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTGACAACTTTGCCTCCTaGCCCTTGAGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGDNFAS*PLRFFL
Trigger: AAGGAAGAACCTCAAGGGGCAGGAGGCAAAGTTGTC...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCTCCATCTCAGCCACTaGCCACAAACACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPLHLSH*PQTQLH
Trigger: GTGGAGCTGTGTTTGTGGGCAGTGGCTGAGATGGAG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGACGGAGCATGACGGCTaGATGATTATGGGGTCACCG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGTEHDG*MIMGSP
Trigger: CGGTGACCCCATAATCATGCAGCCGTCATGCTCCGT...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTACTTTGCGGTGGGTCTaGAAGTCACCCCACTCGTTG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPTLRWV*KSPHSL
Trigger: CAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGCAGTCCTCGTAGTTaGGGTAGAAAGCCACGTCGG +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLGSPRS*GRKPRR
Trigger: CCGACGTGGCTTTCTACCCCAACTACGAGGACTGCC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTCCCCAGACTTGTCTGTaGCTCTGTCCAGACGCTTGG +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLPQTCL*LCPDAW
Trigger: CCAAGCGTCTGGACAGAGCCACAGACAAGTCTGGGG...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGCTTTTCATTTTGTGTaGCCGGAGGCTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGAFHFV*PEASRK
Trigger: CTTCCTGCTAGCCTCCGGCCACACAAAATGAAAAGC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCACACACCGAAGACCGTaGTATGGTAACCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLTHRRP*YGNRSQ
Trigger: CTGTGAACGGTTACCATACCACGGTCTTCGGTGTGT...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGCTGATCTGCAGTCTTaGCAACGCGGGAATGACTTC +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAADLQS*QRGNDF
Trigger: GAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGCCTGCCGAAAAGGACTaGACAGGGGAAAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGPAEKD*TGESHS
Trigger: TGAGTGGCTTTCCCCTGTCCAGTCCTTTTCGGCAGG...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACCTGCCGAAAAGGACTaGACAGGGGAAAGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPPAEKD*TGESHS
Trigger: TGAGTGGCTTTCCCCTGTCCAGTCCTTTTCGGCAGG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTGCTCCAGGACGAGCTaGTTCAGGAGTCCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDCSRTS*FRSPST
Trigger: TGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCCGTTCTGGTGGTCCTaGAAGGGGACCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAPFWWS*KGTTVR
Trigger: CCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTCGTGGAACCGGATGTaGAGGAAGAAGTCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSWNRM*RKKSPV
Trigger: CACGGGAGACTTCTTCCTCCACATCCGGTTCCACGA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGATGGGCACCCGCTTTaGGATTTCCTCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMDGHPL*DFLCFS
Trigger: GCTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCCAAAGGGAAGTCGCTaGACGAGGGAGGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAPKGSR*TREVPL
Trigger: CAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCAGAAACAGCCCAGGTaGCCAGGCCCTCAACTACGC +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAQKQPR*PGPQLR
Trigger: GCGTAGTTGAGGGCCTGGCCACCTGGGCTGTTTCTG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCGGTCACCTTCTCTACTaGGACAGAAAGGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGGHLLY*DRKGAL
Trigger: CAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACC...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACAGAAGCAGCAACTGCTaGACTGTATTGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHRSSNC*TVLPGS
Trigger: GCTACCTGGCAATACAGTCCAGCAGTTGCTGCTTCT...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGACATGATCTGTTCCTaGCTTACCCTCCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDDMICS*LTLRWP
Trigger: AGGCCAGCGGAGGGTAAGCCAGGAACAGATCATGTC...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTCAGGATAGTGATAGATaGCAGAAGCTGAACACAATC +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSQDSDR*QKLNTI
Trigger: GATTGTGTTCAGCTTCTGTCATCTATCACTATCCTG...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGGACACGTACAGCCTTaGTGCACGCTTCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDGHVQP*CTLPTQ
Trigger: TTGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCC...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATTGGTTGACACGTTCTaGCCCAGCAAGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTLVDTF*PSKLFI
Trigger: AATGAAAAGCTTGCTGGGTCAGAACGTGTCAACCAA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGAAAGGACTTTTGGTTaGCACGTTCTGACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGERTFG*HVLTQQ
Trigger: TTGCTGGGTCAGAACGTGTCAACCAAAAGTCCTTTC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCAGAAGAAGGTTGCAATaGATGTGCAGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASRRRLQ*MCRSGQ
Trigger: CTGCCCAGATCTGCACATTCATTGCAACCTTCTTCT...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCTTGAACTTGTCCACTTaGATAGCCATTCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLLNLST*IAIRWH
Trigger: GTGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAA...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCATTGTCTACACAAGTaGGGTTGGGCTGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGHCLHK*GWAEPI
Trigger: GATGGGCTCAGCCCAACCTCACTTGTGTAGACAATG...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCATCACTGAGATCCTaGAGGAGATTCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPASSLRS*RRFSWQ
Trigger: CTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGA...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACTGACGGTCAGCTCATaGTCGGTGGAGTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPLTVSS*SVELKT
Trigger: TGTCTTCAACTCCACCGAGCATGAGCTGACCGTCAG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAGGCGCCAGCTGCAGGTaGTCCAGGACGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEGASCR*SRTSWF
Trigger: GAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCC...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGTAGCCCAGCAAAGATaGTACAGGAGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGVAQQR*YRRNRR
Trigger: CCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTAC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCTTTGGGATTTCCTCTaGTTCAGCCTGTGTATGGTC +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQLWDFL*FSLCMV
Trigger: GACCATACACAGGCTGAAGCAGAGGAAATCCCAAAG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGACCCAGCCACAGAAATaGCAGCAAACAACACCCCTG +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMTQPQK*QQTTPL
Trigger: CAGGGGTGTTGTTTGCTGGCATTTCTGTGGCTGGGT...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACTGGCCGGTGTCTATTaGCTGCTTCAGCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGLAGVY*LLQQEG
Trigger: CCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGGTGGTGAGGGCACCTaGATCAATGAGAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMGGEGT*INENFL
Trigger: CAGGAAGTTCTCATTGATCCAGGTGCCCTCACCACC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGCTTTTCATTTTGTGTaGCCGGAGGCTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEAFHFV*PEASRK
Trigger: CTTCCTGCTAGCCTCCGGCCACACAAAATGAAAAGC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGAACACACCGAAGACCGTaGTATGGTAACCGTTCACAG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRTHRRP*YGNRSQ
Trigger: CTGTGAACGGTTACCATACCACGGTCTTCGGTGTGT...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAATGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEECRRFS*QEKSSF
Trigger: GAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCA...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTTTGTTGCTCTCGGGTaGGTTCACAGGTTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDFVALG*VHRFAL
Trigger: GAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACATGCGCGGGCTCCGGTTaGTCAGCCGCACCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETCAGSG*SAAPPG
Trigger: GCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCA...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTTGCACGCCGTTCTGGTaGTCCTGGAAGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVACTPFW*SWKGTT
Trigger: TGTGGTCCCCTTCCAGGACCACCAGAACGGCGTGCA...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACCCAGGTCACAGAAATaGGTGCAGGGATCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGPRSQK*VQGSWD
Trigger: GTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCTGCCAAGTTGCCCATaGGGGTCTCCAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGLPSCP*GSPGRK
Trigger: TTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAG...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGATTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRFAHHG*RASLGI
Trigger: GATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAA...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTTTTGCCCACCACGGGTaGAGGGCCTCTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVAFAHHG*RASLGI
Trigger: GATGCCAAGAGAGGCCCTCCACCCGTGGTGGGCAAA...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACAAGGAGTTGACAAGTaGCTGAGCTGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEQGVDK*LSWSSA
Trigger: TGCTGAACTCCAGCTCAGCCACTTGTCAACTCCTTG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCGGAGCATAGCAATGTaGCCTGTTAAGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPRSIAM*PVKGSR
Trigger: CCTGGAACCCTTAACAGGCCACATTGCTATGCTCCG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGTCCTCTTATAGATCCTaGAGAAGTTCTCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGSSYRS*RSSPRR
Trigger: TCTCCGAGGAGAACTTCTTCAGGATCTATAAGAGGA...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTCCTCTTATAGATCCTaGAGAAGTTCTCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQSSYRS*RSSPRR
Trigger: TCTCCGAGGAGAACTTCTTCAGGATCTATAAGAGGA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGATCCATGCTCCGTTTCTaGATTGCAAGGACACGTACA +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRSMLRF*IARTRT
Trigger: TGTACGTGTCCTTGCAATTCAGAAACGGAGCATGGA...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTATTCTGAAGAAATTCTaGTGCTTCCATGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSILKKF*CFHAPF
Trigger: AAACGGAGCATGGAAGCATCAGAATTTCTTCAGAAT...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGAAAGGACTTTTGGTTaGCACGTTCTGACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAERTFG*HVLTQQ
Trigger: TTGCTGGGTCAGAACGTGTCAACCAAAAGTCCTTTC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCACTCCACTCCGCTGGTaGGCAGCCCCATGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTATPLRW*AAPCFQ
Trigger: TTGAAAACATGGGGCTGCTCACCAGCGGAGTGGAGT...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCAGAAGAAGGTTGCAATaGATGTGCAGATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: APSLLPSCPWGSPGRKPARRRLQ*MCRSGQ
Trigger: CTGCCCAGATCTGCACATTCATTGCAACCTTCTTCT...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGACATCCAGGAGCAGGTaGCACTGCCGGGTACTGGTT +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGTSRSR*HCRVLV
Trigger: AACCAGTACCCGGCAGTGTCACCTGCTCCTGGATGT...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGCTGCTCCTGGTGCTaGCGGTCAGCTCATGCTCGG +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTRCSWC*RSAHAR
Trigger: CCGAGCATGAGCTGACCGTCAGCACCAGGAGCAGCG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACACACCGGCGTGCAGGATaGGTGCCTCGCTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETHRRAG*VPRCSW
Trigger: CCAGGAGCAGCGAGGCACTCATCCTGCACGCCGGTG...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGAGGCAGGCCATTTATTaGAGAACTGCTTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQRQAIY*RTACRH
Trigger: ATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGAAGTGCAATGGACATaGTCTGTTCCTGGCTTACCC +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMEVQWT*SVPGLP
Trigger: GGGTAAGCCAGGAACAGATCATGTCCATTGCACTTC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCCACGTGCTTCCGCATaGGGCCTTGGCACCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRPRASA*GLGTAS
Trigger: AGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTCCGCATTCTTATACTTaGTGTAATAGGAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSPHSYT*CNRKSP
Trigger: AGGCGATTTCCTATTACAGCAAGTATAAGAATGCGG...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGCTCCGTTTCTGAATTaGAAGGACACGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEAPFLN*KDTYSL
Trigger: AAGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CAAGTGAGTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACGCCACCTTCCCAGGCTaGAAAGGGAACTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVSYKQQTAGIKGWGLLHATFPG*KGNWAR
Trigger: CCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGC...GTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAACTCACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTASRLLC*SRVGSQ
Trigger: CTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACT...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGGCTCGACTTCTACATaGAGCCCCAGGGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGGSTST*SPRERF
Trigger: GAATCTCTCCCTGGGGCTGCATGTAGAAGTCGAGCC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAATGGCACTCACCGGCGTaGAGGATGAGTGCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEWHSPA*RMSASL
Trigger: CAGCGAGGCACTCATCCTGCACGCCGGTGAGTGCCA...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGTTGACACACATGGATaGTGTTTGTTCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHVDTHG*CLFHSE
Trigger: TTCTGAATGGAACAAACAGCATCCATGTGTGTCAAC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCCAAGAAGACAACTTTaGCTCCTGCCCCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPPRRQL*LLPLEV
Trigger: AACCTCAAGGGGCAGGAGGCAAAGTTGTCTTCTTGG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCTCCATCTCAGCCACTaGCCACAAACACAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTALHLSH*PQTQLH
Trigger: GTGGAGCTGTGTTTGTGGGCAGTGGCTGAGATGGAG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACCCCAGACTTGTCTGTaGCTCTGTCCAGACGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRPQTCL*LCPDAW
Trigger: CCAAGCGTCTGGACAGAGCCACAGACAAGTCTGGGG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTGGTCCCAGGACACTTaGACGTATAGTTCTCTAGGC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGWSQDT*TYSSLG
Trigger: GCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTAGGACCCGGCTGCAAAGGGAACTaGGCAAGGGTTTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: TANSRHQGMGVATQYLGPGCKGN*ARVSSS
Trigger: GCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCC...GGGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGCRRFS*QEKSSF
Trigger: GAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGTGGAGGGCCTCTCTTaGCATCAACCATCCACGACC +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVAVEGLS*HQPSTT
Trigger: GGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCAC...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTAGGGAGGTTTGGGCCTaGGACTTCAGGTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVAREVWA*DFRSSG
Trigger: TCCTGAGGACCTGAAGTCCCAGGCCCAAACCTCCCT...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACATCTGGATCTGTGGCTaGATCTATATCTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHIWICG*IYICSY
Trigger: ATAGCTACAGATATAGATCCAGCCACAGATCCAGAT...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGAGCAAACAACACCCCTaGCTCCCCACATCCCACGGT +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGSKQHP*LPTSHG
Trigger: ACCGTGGGATGTGGGGAGCCAGGGGTGTTGTTTGCT...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGGAATTTCAGGCACATaGCACAGGATATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGGISGT*HRIFQA
Trigger: TGCCTGAAATATCCTGTGCCATGTGCCTGAAATTCC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGTGTGAAGCTCAGGGGTaGAGGCCCCGCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTCEAQG*RPRGSP
Trigger: TGGGCTTCCGCGGGGCCTCCACCCCTGAGCTTCACA...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648948.2
3UTR CAA 72 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTaGTTCCATTCAGAAACAGCCCAGGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCC*FHSETAQVARP
Trigger: GGGCCTGGCCACCTGGGCTGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTATAGATGACAGAAGCTaGACACAATCCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPIDDRS*TQSFQG
Trigger: GCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTAT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTCCATGCTCCGTTTCTaGATTGCAAGGACACGTACA +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSMLRF*IARTRT
Trigger: TGTACGTGTCCTTGCAATTCAGAAACGGAGCATGGA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCTCCATGCTCCGTTTCTaGATTGCAAGGACACGTACA +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGSMLRF*IARTRT
Trigger: TGTACGTGTCCTTGCAATTCAGAAACGGAGCATGGA...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGATGTGCGTGCCTCTGCTaGAATCTTTGGGATCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRCACLC*NLWDPA
Trigger: CGCTGGATCCCAAAGATTTCAGCAGAGGCACGCACA...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTGAAAGGACTTTTGGTTaGCACGTTCTGACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPERTFG*HVLTQQ
Trigger: TTGCTGGGTCAGAACGTGTCAACCAAAAGTCCTTTC...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTGTGTGCGATAATTGGTaGATAGATGAAAGGACTTTT +
Preference number: 4 (lower is better)
Translates to: RAEETALGSPPPTAARPSVCDNW*IDERTF
Trigger: AAAAGTCCTTTCATCTATTCACCAATTATCGCACAC...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCTTATATACCATCAGCTaGACTTCACACACATCTCCT +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHALYTIS*TSHTSP
Trigger: AGGAGATGTGTGTGAAGTTCAGCTGATGGTATATAA...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTTGAACTTGTCCACTTaGATAGCCATTCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDLNLST*IAIRWH
Trigger: GTGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGCCCTCAAGGGAGATGTaGGCCGTGTGCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGPSREM*AVCFLS
Trigger: AGAGAGAAAGCACACGGCTCACATCTCCCTTGAGGG...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp ATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACCCGCCCCCACATGCCCTTGAATACTTCTATTaGCAAAGAGCTCACTCCATC +
Preference number: 4 (lower is better)
Translates to: MLNELQELRATGHPPPHALEYFY*QRAHSI
Trigger: GATGGAGTGAGCTCTTTGTCAATAGAAGTATTCAAG...GGCATGTGGGGGCGGGTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGGCCCGGGAGGCACGTaGGGTGCGAGCCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWGPGGT*GASPSL
Trigger: CAGGCTGGGGCTCGCACCTCACGTGCCTCCCGGGCC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAGCTCCGTTTCTGAATTaGAAGGACACGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPAPFLN*KDTYSL
Trigger: AAGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGC...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAGAGCTCGGAGAGGATaGTGTAGCGCTGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPRARRG*CSAEFS
Trigger: AGAAAATTCAGCGCTACAGCATCCTCTCCGAGCTCT...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCACATCAGATGTCAAATaGAACTCCAGTTCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASTSDVK*NSSSGH
Trigger: GTGACCTGAACTGGAGTTGCATTTGACATCTGATGT...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTAGGACCCCCATCACTGAGATCCTaGAGGAGATTCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TANSRHQGMGVATQYLGPPSLRS*RRFSWQ
Trigger: CTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGG...GGGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CCA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAATCTCCTTCTGCACGTaGAACTTCTCAAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEISFCT*NFSKVC
Trigger: ACAGACCTTTGAGAAGTTCCACGTGCAGAAGGAGAT...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCATGCCCAGCTTGCTGTaGATCTCCAGGCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRMPSLL*ISRPRA
Trigger: AGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCAT...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTAGAAGCAGCAACTGCTaGACTGTATTGCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLRSSNC*TVLPGS
Trigger: GCTACCTGGCAATACAGTCCAGCAGTTGCTGCTTCT...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAGGGCACCTGGATCAATaGGAACTTCCTGTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEGHLDQ*ELPVPL
Trigger: CAGGGGCACAGGAAGTTCTCATTGATCCAGGTGCCC...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGTGGCGGCCACGCGCTTaGAGAACGCAGACTTGCGAT +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTWRPRA*RTQTCD
Trigger: ATCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCA...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAGGCAGGCCATTTATTaGAGAACTGCTTGCAGACAT +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDRQAIY*RTACRH
Trigger: ATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCGAGCAGATGCTGAATaGGCTCCAGGAACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRRADAE*APGTEG
Trigger: GCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGCTTGAATACTTCTATTaGCAAAGAGCTCACTCCATC +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQLEYFY*QRAHSI
Trigger: GATGGAGTGAGCTCTTTGTCAATAGAAGTATTCAAG...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GTCCGGGGCTTCTGCGTAGCCCAGCAAAGATGCTACAGGAGGAACAGGAGGAGATCACCAGAAGAAGGTTaGAATGAATGTGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: VRGFCVAQQRCYRRNRRRSPEEG*NECADL
Trigger: CAGATCTGCACATTCATTGCAACCTTCTTCTGGTGA...TCTCCTCCTGTTCCTCCTGTAGCATCTTTGCTGGGCTACGCAGAAGCCCCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCATGTCCGGGGCTTCTaGGTAGCCCAGCAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRHVRGF*VAQQRC
Trigger: GCATCTTTGCTGGGCTACGCAGAAGCCCCGGACATG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCCCGACGAGCGTCACTaGGTACAGACCAGATTCAGC +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRPDERH*VQTRFS
Trigger: GCTGAATCTGGTCTGTACCCAGTGACGCTCGTCGGG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACCACTGTGGAGCCACTaGTTTTTATTCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRPLWSH*FLFPAG
Trigger: ACCTGCCGGGAATAAAAACCAGTGGCTCCACAGTGG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACACTCCAGTTTCTCCAATaGTTCCATTCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTLQFLQ*FHSNIF
Trigger: GAAAATATTGGAATGGAACCATTGGAGAAACTGGAG...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACACTGAAGAGACCGCCCTaGGGTCTCCACCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETLKRPP*GLHPLL
Trigger: CAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAG...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATGTTGTTTCATTCAATaGCGTATTTTTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTCCFIQ*RIFGLC
Trigger: ACAGAGCCCAAAAATACGCCATTGAATGAAACAACA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGTGTGCGATAATTGGTaGATAGATGAAAGGACTTTT +
Preference number: 4 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGVCDNW*IDERTF
Trigger: AAAAGTCCTTTCATCTATTCACCAATTATCGCACAC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAACCAGCAAACAGTCACTaGACACACCGAAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEPANSH*THRRPW
Trigger: CCACGGTCTTCGGTGTGTTCAGTGACTGTTTGCTGG...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCATGCTCGGTGGAGTTaGAGACATCCAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRHARWS*RHPGAG
Trigger: ACCTGCTCCTGGATGTCTTCAACTCCACCGAGCATG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGGCCCTCAACTACGCTaGGGCATCCTGAACGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETGPQLR*GILNGR
Trigger: CCTTCCGTTCAGGATGCCTCAGCGTAGTTGAGGGCC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGGATCTATTGTGCTTTTaGAAGGAAAGTACGTACTCA +
Preference number: 4 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWDLLCF*KESTYS
Trigger: TGAGTACGTACTTTCCTTTCAAAAGCACAATAGATC...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACGATCTATTGTGCTTTTaGAAGGAAAGTACGTACTCA +
Preference number: 4 (lower is better)
Translates to: GSLEQMLNELQELRATGHDLLCF*KESTYS
Trigger: TGAGTACGTACTTTCCTTTCAAAAGCACAATAGATC...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAAGCATGACGGCTGCATaGTTATGGGGTCACCGGGCC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETSMTAA*LWGHRA
Trigger: GGCCCGGTGACCCCATAATCATGCAGCCGTCATGCT...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTCTTGTGAATTTCAGATaGCGGAGCATGACGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVALVNFR*RSMTAA
Trigger: TGCAGCCGTCATGCTCCGTCATCTGAAATTCACAAG...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCATCACCAGAAGAAGGTTaGAATGAATGTGCAGATCTG +
Preference number: 4 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPSPEEG*NECADL
Trigger: CAGATCTGCACATTCATTGCAACCTTCTTCTGGTGA...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTCTGAGCCCATCATCCTaGAATGTGTTGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPLSPSS*NVLFHS
Trigger: TGAATGAAACAACACATTGCAGGATGATGGGCTCAG...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATACATCAGATGTCAAATaGAACTCCAGTTCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDTSDVK*NSSSGH
Trigger: GTGACCTGAACTGGAGTTGCATTTGACATCTGATGT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTTTACAGTCACCAATATaGTTGCCACTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGLQSPI*LPLRIK
Trigger: TTTGATTCTGAGTGGCAAGCATATTGGTGACTGTAA...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp ACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTAGGACCCACTCTGTTAACAAAGTaGCCAGGAGATGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TANSRHQGMGVATQYLGPTLLTK*PGDVSG
Trigger: GCCTGAGACATCTCCTGGGCACTTTGTTAACAGAGT...GGGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGGAGTCATACAGTGTaGAGCCGTAGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVAGSHTV*SRRSPS
Trigger: AGAAGGAGATCTACGGCTCCACACTGTATGACTCCC...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGCTTTTCATTTTGTGTaGCCGGAGGCTAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRAFHFV*PEASRK
Trigger: CTTCCTGCTAGCCTCCGGCCACACAAAATGAAAAGC...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGCTCCAGTTTCTCCAATaGTTCCATTCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWLQFLQ*FHSNIF
Trigger: GAAAATATTGGAATGGAACCATTGGAGAAACTGGAG...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACATGCACGCCGTTCTGGTaGTCCTGGAAGGGGACCACA +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETCTPFW*SWKGTT
Trigger: TGTGGTCCCCTTCCAGGACCACCAGAACGGCGTGCA...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTGGTGCTGTCCTCGTaGAACCGGATGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTLVLSS*NRMWRK
Trigger: CTTCCTCCACATCCGGTTCCACGAGGACAGCACCAG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGGCCTGTTTGGCCAACTaGCCTTTAGGAAGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTACLAN*PLGSPA
Trigger: AGCGGGGCTTCCTAAAGGCCAGTTGGCCAAACAGGC...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTGTTGTTTCATTCAATaGCGTATTTTTGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQCCFIQ*RIFGLC
Trigger: ACAGAGCCCAAAAATACGCCATTGAATGAAACAACA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGAATTTCAGGCACATaGCACAGGATATTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLGISGT*HRIFQA
Trigger: TGCCTGAAATATCCTGTGCCATGTGCCTGAAATTCC...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAATAGATGACAGAAGCTaGACACAATCCTTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRIDDRS*TQSFQG
Trigger: GCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTAT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTCAGGATAGTGATAGATaGCAGAAGCTGAACACAATC +
Preference number: 4 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLQDSDR*QKLNTI
Trigger: GATTGTGTTCAGCTTCTGTCATCTATCACTATCCTG...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTATTCTGAAGAAATTCTaGTGCTTCCATGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPILKKF*CFHAPF
Trigger: AAACGGAGCATGGAAGCATCAGAATTTCTTCAGAAT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGTTATATACCATCAGCTaGACTTCACACACATCTCCT +
Preference number: 4 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMLYTIS*TSHTSP
Trigger: AGGAGATGTGTGTGAAGTTCAGCTGATGGTATATAA...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTTATATACCATCAGCTaGACTTCACACACATCTCCT +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDLYTIS*TSHTSP
Trigger: AGGAGATGTGTGTGAAGTTCAGCTGATGGTATATAA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCAGCAAACAGTCACTaGACACACCGAAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTPANSH*THRRPW
Trigger: CCACGGTCTTCGGTGTGTTCAGTGACTGTTTGCTGG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR TCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCATTGTCTACACAAGTaGGGTTGGGCTGAGCCCATC +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRHCLHK*GWAEPI
Trigger: GATGGGCTCAGCCCAACCTCACTTGTGTAGACAATG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCGGTGTCTATTGGCTaGTTCAGCAGGAAGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTPVSIG*FSRKGA
Trigger: AGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAAGAGCTCGGAGAGGATaGTGTAGCGCTGAATTTTCT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRRARRG*CSAEFS
Trigger: AGAAAATTCAGCGCTACAGCATCCTCTCCGAGCTCT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGGGCTCGACTTCTACATaGAGCCCCAGGGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTGSTST*SPRERF
Trigger: GAATCTCTCCCTGGGGCTGCATGTAGAAGTCGAGCC...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGACGAGCCTGGTATCTaGTGGGGACCAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETDEPGI*WGPRAV
Trigger: AACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATAGTCACCAATATGCTTaGCACTCAGAATCAAACACT +
Preference number: 4 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDSHQYA*HSESNT
Trigger: AGTGTTTGATTCTGAGTGGCAAGCATATTGGTGACT...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCGCCAGGGAGGGCGATaGGCTCCATGGTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWRQGGR*APWSQD
Trigger: GTCCTGGGACCATGGAGCCCATCGCCCTCCCTGGCG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGAAGTTCAAACGGCATTaGGTTATATACCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGKFKRH*VIYHQL
Trigger: CAGCTGATGGTATATAACCCAATGCCGTTTGAACTT...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAACCACTGTGGAGCCACTaGTTTTTATTCCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GVDKWLSWSSASQTSSFEPLWSH*FLFPAG
Trigger: ACCTGCCGGGAATAAAAACCAGTGGCTCCACAGTGG...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAAGTGAGTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QVSYKQQTAGIKGWGLLHCRRFS*QEKSSF
Trigger: GAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCA...GTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAACTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCGAGCCTGGTATCTGCTaGGGACCAAGGGCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRREPGIC*GPRAVY
Trigger: ATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTC...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTCCCCCAATACTCCATaGGAGTTTCAGTGCCCAACG +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRSPNTP*EFQCPT
Trigger: CGTTGGGCACTGAAACTCCCATGGAGTATTGGGGGA...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTGCAGGCATCAAGGGATaGGGGTTGCTACACAGTATC +
Preference number: 4 (lower is better)
Translates to: VTNSKQQASRDGGCYTVSAGIKG*GLLHSI
Trigger: GATACTGTGTAGCAACCCCCATCCCTTGATGCCTGC...AGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR TCA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTGTGTGCGATAATTGGTaGATAGATGAAAGGACTTTT +
Preference number: 4 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPVCDNW*IDERTF
Trigger: AAAAGTCCTTTCATCTATTCACCAATTATCGCACAC...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACCACGTGCTTCCGCATaGGGCCTTGGCACCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLPRASA*GLGTAS
Trigger: AGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGTCCTGCAGCATCCCTaGCTGCAGGCACAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWVLQHP*LQAQVP
Trigger: GGGGACCTGTGCCTGCAGGCAGGGATGCTGCAGGAC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATACCCAGGCTCCGCGATaGTTGGGGCCACGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYTQAPR*LGPRTA
Trigger: TGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGT...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGGCTCGACTTCTACATaGAGCCCCAGGGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETGSTST*SPRERF
Trigger: GAATCTCTCCCTGGGGCTGCATGTAGAAGTCGAGCC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGCGCCAGCTGCAGGTaGTCCAGGACGAGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGASCR*SRTSWF
Trigger: GAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTTCAAGGGATGGGGGTTaGTACACAGTATCTAGGACC +
Preference number: 4 (lower is better)
Translates to: VTNSKQQASRDGGCYTVSSRDGG*YTVSRT
Trigger: GGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGA...AGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR GCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCCCACTGTGGATCCCTaGGGCACCCCCTGTGACCCT +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWPTVDP*GTPCDP
Trigger: AGGGTCACAGGGGGTGCCGCAGGGATCCACAGTGGG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAATCTCCTTCTGCACGTaGAACTTCTCAAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRISFCT*NFSKVC
Trigger: ACAGACCTTTGAGAAGTTCCACGTGCAGAAGGAGAT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCTCCAGTTTCTCCAATaGTTCCATTCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGLQFLQ*FHSNIF
Trigger: GAAAATATTGGAATGGAACCATTGGAGAAACTGGAG...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGGCTGCAAAGGGAACTaGGCAAGGGTTTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETGCKGN*ARVSSS
Trigger: GCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGTGGGTGCAGGGATCCTaGGACCTGGGCTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWWVQGS*DLGWMG
Trigger: GCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCA...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTAGCAGCACAGCACGGCTaGGGCCCCAGGTCACAGAAA +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLAAQHG*GPRSQK
Trigger: TTTCTGTGACCTGGGGCCCCAGCCGTGCTGTGCTGC...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGGCCCCGGACTGCACTaGGCTAGCAGATGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWGPGLH*ASRCRE
Trigger: CTCCCTGCATCTGCTAGCCCAGTGCAGTCCGGGGCC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATTGCCCAACGGGCACCTaGCGAGCCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYCPTGT*RAWYLL
Trigger: CAGCAGATACCAGGCTCGTCAGGTGCCCGTTGGGCA...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGAATGAGAACTTCCTGTaGCCCTGGCCGGTGTCTATT +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTNENFL*PWPVSI
Trigger: AATAGACACCGGCCAGGGGCACAGGAAGTTCTCATT...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACCGCATTCTTATACTTaGTGTAATAGGAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGPHSYT*CNRKSP
Trigger: AGGCGATTTCCTATTACAGCAAGTATAAGAATGCGG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGTCATCACTGAGATCCTaGAGGAGATTCTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTSSLRS*RRFSWQ
Trigger: CTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGA...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCTGCCGGGTACTGGTTaGTGGGAGGGTGCTGACTCG +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWLPGTG*WEGADS
Trigger: CGAGTCAGCACCCTCCCAGCAACCAGTACCCGGCAG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACGGCACCATCTCTCCTaGCAAGTTGCCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLRHHLS*QVAHGG
Trigger: ACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGTCTCCACCCCCTACTaGAGCCAGACCTTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWVSTPY*SQTFWG
Trigger: GCCCCAGAAGGTCTGGCTGCAGTAGGGGGTGGAGAC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACGAGGTAGAAGGTGCTaGAGCCCACGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLRGRRC*SPRRRR
Trigger: CCGTCTCCTTCGTGGGCTCCAGCACCTTCTACCTCG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTAGGGACCTGGGCTGGATaGGCACCCGCTTTGGGATTT +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLGTWAG*APALGF
Trigger: AAATCCCAAAGCGGGTGCCCATCCAGCCCAGGTCCC...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCCAGCGAGGGAGGTTTaGGCCTGGGACTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWPAREV*AWDFRS
Trigger: GGACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGTCAATGGCGTATTTTTaGGCTCTGTTGAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGSMAYF*ALLRLT
Trigger: TGTCAACCTCAACAGAGCCCAAAAATACGCCATTGA...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCAAGGAGTTGACAAGTaGCTGAGCTGGAGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTQGVDK*LSWSSA
Trigger: TGCTGAACTCCAGCTCAGCCACTTGTCAACTCCTTG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTTGGTTGACACGTTCTaGCCCAGCAAGCTTTTCATT +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRLVDTF*PSKLFI
Trigger: AATGAAAAGCTTGCTGGGTCAGAACGTGTCAACCAA...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACCGCATTCTTATACTTaGTGTAATAGGAAATCGCCT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRPHSYT*CNRKSP
Trigger: AGGCGATTTCCTATTACAGCAAGTATAAGAATGCGG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCCACCTTCCCAGGCTaGAAAGGGAACTGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYATFPG*KGNWAR
Trigger: CCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGTTGACACACATGGATaGTGTTTGTTCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRVDTHG*CLFHSE
Trigger: TTCTGAATGGAACAAACAGCATCCATGTGTGTCAAC...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGACAACTTTGCCTCCTaGCCCTTGAGGTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETDNFAS*PLRFFL
Trigger: AAGGAAGAACCTCAAGGGGCAGGAGGCAAAGTTGTC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTCTTCCTTTGAATCCTTaGCTTCCTTGTGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: AVPSLMLTISFYGQREVALPLNP*LPCEFQ
Trigger: CTGAAATTCACAAGGAAGGCAAGGATTCAAAGGAAG...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGCTTCCTTTGAATCCTTaGCTTCCTTGTGAATTTCAG +
Preference number: 4 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGLPLNP*LPCEFQ
Trigger: CTGAAATTCACAAGGAAGGCAAGGATTCAAAGGAAG...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACTCGTTGTTCTCGGGTaGGTAGTGGTGCCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLLVVLG*VVVPVA
Trigger: CGCTACAGGCACCACTACCCACCCGAGAACAACGAG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACATGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETCRRFS*QEKSSF
Trigger: GAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCA...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAATCTGGATCTGTGGCTaGATCTATATCTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRIWICG*IYICSY
Trigger: ATAGCTACAGATATAGATCCAGCCACAGATCCAGAT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACAGACAAGCTGCTGGTaGCCAGATTCCTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLQTSCW*PDSCLS
Trigger: GCTGAGACAGGAATCTGGTCACCAGCAGCTTGTCTG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGTCACAGAAATGGGTaGAGGGATCCTGGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGHRNG*RDPGTW
Trigger: CCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGATTACAGTCACCAATATaGTTGCCACTCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: PSLMLTISFYGQREVAGRLQSPI*LPLRIK
Trigger: TTTGATTCTGAGTGGCAAGCATATTGGTGACTGTAA...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCTCAATGGCGTATTTTTaGGCTCTGTTGAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRSMAYF*ALLRLT
Trigger: TGTCAACCTCAACAGAGCCCAAAAATACGCCATTGA...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGTACGCTGAGGCATCCTaGACGGAAGGGCTGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWYAEAS*TEGLKR
Trigger: TCTCTTCAGCCCTTCCGTTCAGGATGCCTCAGCGTA...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCCTTCAGGAGGTTTCTaGATGCACCAGGGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWPSGGF*MHQGPR
Trigger: TCTAGGCCCCTGGTGCATTCAGAAACCTCCTGAAGG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCATTTATTGAAGAACTaGTTGCAGACATGGACACAC +
Preference number: 4 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRHLLKN*LQTWTH
Trigger: GTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCATTTATTGAAGAACTaGTTGCAGACATGGACACAC +
Preference number: 4 (lower is better)
Translates to: FIEELLADMDTHSHGNQTHLLKN*LQTWTH
Trigger: GTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATG...CGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR GCA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACACTGAGCCCATCATCCTaGAATGTGTTGTTTCATTCA +
Preference number: 4 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETLSPSS*NVLFHS
Trigger: TGAATGAAACAACACATTGCAGGATGATGGGCTCAG...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR GCA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATACTGCTGGACTGTATTaGCAGGTAGCCAGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: SESNTARVFHIGFSRLLYTAGLY*QVASSV
Trigger: CACGCTACTGGCTACCTGGCAATACAGTCCAGCAGT...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CCA 90 bp GTTACAAACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTCTCCAGTTTCTCCAATaGTTCCATTCCAATATTTTC +
Preference number: 4 (lower is better)
Translates to: VTNSKQQASRDGGCYTVSLQFLQ*FHSNIF
Trigger: GAAAATATTGGAATGGAACCATTGGAGAAACTGGAG...AGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGTTTGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR GCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCACCACATCACAGTGTaGTCCCATCATTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWHHITV*SHHSLS
Trigger: GCTCAGTGAATGATGGGAGCACACTGTGATGTGGTG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 72 bp GTGTTGTTTCATTCAATGGCGTATTTTTGGGCTCTGTaGAGGTTGACACACATGGATGCTGTTTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: VLFHSMAYFWAL*RLTHMDAVCSI
Trigger: AATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAACAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
3UTR CAA 72 bp TTTCATTCAATGGCGTATTTTTGGGCTCTGTTGAGGTaGACACACATGGATGCTGTTTGTTCCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FHSMAYFWALLR*THMDAVCSIQK
Trigger: TTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATACGCCATTGAATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR TCA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGATTCTGAAGAAATTCTaGTGCTTCCATGCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: HIGFSRLLYASISNLDLWILKKF*CFHAPF
Trigger: AAACGGAGCATGGAAGCATCAGAATTTCTTCAGAAT...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCAGGCTCCGCGATGCTaGGGGCCACGCACTGCATGG +
Preference number: 5 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASQAPRC*GPRTAW
Trigger: CCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTG...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 90 bp CGTAGTTGTGCACGCCGTTCTGGTGGTCCTGGAAGGGGACCACAGTaGGGGCGAAGGGCCCTACGCTGCGCGGGCTCCGGTTGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: RSCARRSGGPGRGPQ*GRRALRCAGSGWSA
Trigger: GGCTGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCGCCCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGGCGTGCACAACTACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS GCA 90 bp GACGGAAGTAGGCGGGCTCAGGCCTGCGCCTCCAGGGCACACACGTaGACACTGGGCAGGCAGAACCAAGAGGGTGGCAGCTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DGSRRAQACASRAHT*TLGRQNQEGGSSLL
Trigger: CAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGCACGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCTACTTCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCTGACGATGGGAAGCTaGGTGAAGGGCACCGGTGGC +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLTMGS*VKGTGG
Trigger: GCCACCGGTGCCCTTCACCAAGCTTCCCATCGTCAG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCCAGCTGCTTGGGGTTaGCAAATTGCCCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PWAASPGLDICPPRVEGLPAAWG*QIAPSP
Trigger: GGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTGG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TCTCTAACTCAGAACCCGTCCCTTCCTGGGTCCGGCTTCTGCTGGGAAGCCAGCCTGCGCGGGCTCCGGTaGGTCAGCCGCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLTQNPSLPGSGFCWEASLRGLR*VSRTSR
Trigger: CCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAG...GCTGGCTTCCCAGCAGAAGCCGGACCCAGGAAGGGACGGGTTCTGAGTTAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp CGCCACTGCGCTTCAGGGAGGGGATTCTCCAGCAGATGCCCAGCTTaGTGTGGATCTCCAGGCCTCGGGCTTCCCGCCGCTCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: RHCASGRGFSSRCPA*CGSPGLGLPAALPP
Trigger: TGGAGGAAGAGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCTGAAGCGCAGTGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CCA 90 bp CAGGAGGAGTTTGTAGCAGGCCCTCCACCCAGGCTCCGCGATGCTTaGGGCCACGCACTGCATGGCGGCCACGCGCTTGAAGAACGCAGA +
Preference number: 5 (lower is better)
Translates to: QEEFVAGPPPRLRDA*GHALHGGHALEERR
Trigger: TCTGCGTTCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGTGGAGGGCCTGCTACAAACTCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CCA 90 bp CTGCGCTTCAGGGAGGGGATTCTCCAGCAGATGCCCAGCTTGCTGTaGATCTCCAGGCCTCGGGCTTCCCGCCGCTCTTCCTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LRFREGILQQMPSLL*ISRPRASRRSSSSC
Trigger: GCAGCTGGAGGAAGAGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCTGAAGCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTTCATGCTCGGTGGAGTaGAAGACATCCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPSCSVE*KTSRSR
Trigger: CCTGCTCCTGGATGTCTTCAACTCCACCGAGCATGA...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCAGCTGCTTGGGGTTaGCAAATTGCCCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: TALGCQPRPGHLPTTGGGPAAWG*QIAPSP
Trigger: GGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTGG...CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCTGCGCGGGCTCCGGTaGGTCAGCCGCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: APSLLPSCPWGSPGRKPALRGLR*VSRTSR
Trigger: CCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTGGAAGAAAACCAGCCTaGGGGGATTCCAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASGRKPA*GDSKAQ
Trigger: CTGGGCCTTGGAATCCCCCAAGGCTGGTTTTCTTCC...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 90 bp TGTCCGTCCACCAGCACATCCCACTGCAGAGGCGCCAGCTGCAGGTaGTCCAGGACGAGCTGGTTCAGGAGTCCTTCCACACTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: CPSTSTSHCRGASCR*SRTSWFRSPSTLAS
Trigger: CGAGGCGAGTGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGTGGACGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CCA 90 bp GACGTGGTGCTGCAGAAGGAGCCTCCTGCCCTCCCGAGGTTCCTCTaGTGGCCTCTGGCTGGAGAGACTGTCCACAGGCTCACTCCAGGA +
Preference number: 5 (lower is better)
Translates to: DVVLQKEPPALPRFL*WPLAGETVHRLTPG
Trigger: TCCTGGAGTGAGCCTGTGGACAGTCTCTCCAGCCAGAGGCCACCAGAGGAACCTCGGGAGGGCAGGAGGCTCCTTCTGCAGCACCACGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522504.5
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGGCTCTGTCCAGACGCTaGGACTCCAGCACGATGAAC +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWALSRR*DSSTMN
Trigger: GTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGC...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGCTTCCGCATGCGGCCTaGGCACCGCTTCTTGTAATG +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWLPHAA*APLLVM
Trigger: CATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAG...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGGACACGTACAGCCTaGATGCACGCTTCCAACTCA +
Preference number: 5 (lower is better)
Translates to: QPWAASPGLDICPPRVEGRTRTA*MHASNS
Trigger: TGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCCT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCTCTGCTGAAATCTTaGGGATCCAGCGACAGACTG +
Preference number: 5 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPPLLKS*GSSDRL
Trigger: CAGTCTGTCGCTGGATCCCAAAGATTTCAGCAGAGG...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGCTGCGCGGGCTCCGGTaGGTCAGCCGCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGLRGLR*VSRTSR
Trigger: CCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAG...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGGAAGAAAACCAGCCTaGGGGGATTCCAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRGRKPA*GDSKAQ
Trigger: CTGGGCCTTGGAATCCCCCAAGGCTGGTTTTCTTCC...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGCCCAGGCCTGGACATTaGCCCACCACGGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGPRPGH*PTTGGG
Trigger: CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGG...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp CCACCGTCTGGCAGTCCTCGTAGTTGGGGTAGAAAGCCACGTCGGTaGGCGGCTGCTCCACGATCTCCCCCTGCAGCCCGAAGACAAAGA +
Preference number: 5 (lower is better)
Translates to: PPSGSPRSWGRKPRR*AAAPRSPPAARRQR
Trigger: TCTTTGTCTTCGGGCTGCAGGGGGAGATCGTGGAGCAGCCGCGCACCGACGTGGCTTTCTACCCCAACTACGAGGACTGCCAGACGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp GTGCCCCTGGCCGGTGTCTATTGGCTGCTTCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTCCACTCTTCCCACCAGTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: VPLAGVYWLLQQEGC*PGTSELHSSHQFHQ
Trigger: CTGGTGGAACTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp CCTGTGCCCCTGGCCGGTGTCTATTGGCTGCTTCAGCAGGAAGGGTaGTGCCCTGGAACCTCCGAGCTCCACTCTTCCCACCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: PVPLAGVYWLLQQEG*CPGTSELHSSHQFH
Trigger: GTGGAACTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGGGGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp GGGCACCTGGCCGGTGTCTATTGGCTGCTTCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTCCACTCTTCCCACCAGTTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GHLAGVYWLLQQEGC*PGTSELHSSHQFHQ
Trigger: CTGGTGGAACTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520857.5
ENST00000521944.1
CDS GCA 90 bp GCAAGCCTGGGGAAGAAACGACGTGGTGCTGCAGAAGGAGCCTCCTaGCCTCCCGAGGTTCCTCTGGTGGCCTCTGGCTGGAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: ASLGKKRRGAAEGAS*PPEVPLVASGWRDC
Trigger: ACAGTCTCTCCAGCCAGAGGCCACCAGAGGAACCTCGGGAGGGCAGGAGGCTCCTTCTGCAGCACCACGTCGTTTCTTCCCCAGGCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522504.5
CDS CCA 90 bp CAGGGTCTTCACGTGGCTGTAGTCGCCTGCTTTGTTGCTCTCGGGTaGGTTCACAGGTTTGCCCTCCACTCGGGGCCGAACGACCTGCCG +
Preference number: 5 (lower is better)
Translates to: QGLHVAVVACFVALG*VHRFALHSGPNDLP
Trigger: CGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACCTGGCCGGTGTCTATaGGCTGCTTCAGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAPGRCL*AASAGR
Trigger: CCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGG...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCTGCTCCGTTTCTGAATaGCAAGGACACGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: QPWAASPGLDICPPRVEGCSVSE*QGHVQP
Trigger: AGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGCA...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCAGCAAGCTTTTCATTTaGTGTGGCCGGAGGCTAGCA +
Preference number: 5 (lower is better)
Translates to: QPWAASPGLDICPPRVEGSKLFI*CGRRLA
Trigger: TGCTAGCCTCCGGCCACACAAAATGAAAAGCTTGCT...GCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGGGCCTCCAGAGTATTaGAAATTCAGGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPGPPEY*KFRTAS
Trigger: GGAAGCTGTCCTGAATTTCAAATACTCTGGAGGCCC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGTCATGCTCGGTGGAGTaGAAGACATCCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWSCSVE*KTSRSR
Trigger: CCTGCTCCTGGATGTCTTCAACTCCACCGAGCATGA...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCCCCAGGCCTGGACATTaGCCCACCACGGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAPRPGH*PTTGGG
Trigger: CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGG...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAACCCAGGCCTGGACATTaGCCCACCACGGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEPRPGH*PTTGGG
Trigger: CCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGG...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTGGCCACAGGGTGACCTaGCTCCCAGCGAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGGHRVT*LPAREV
Trigger: AACCTCCCTCGCTGGGAGCAAGGTCACCCTGTGGCC...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp ACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACAGGACTCGTGTGGCGCGCGGTCTaGATCCCCAGCTGGCACCAT +
Preference number: 5 (lower is better)
Translates to: TWGAKGQHSQKPAPRTGLVWRAV*IPSWHH
Trigger: ATGGTGCCAGCTGGGGATCAAGACCGCGCGCCACAC...GAGTCCTGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS TCA 90 bp GCTCCGCGATGCTTGGGGCCACGCACTGCATGGCGGCCACGCGCTTaGAGAACGCAGACTTGCGATGGAAGCCGATCAGCTCATAGAGCT +
Preference number: 5 (lower is better)
Translates to: APRCLGPRTAWRPRA*RTQTCDGSRSAHRA
Trigger: AGCTCTATGAGCTGATCGGCTTCCATCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CCA 90 bp ATGGCTGTCCGTCCACCAGCACATCATCATCCCACGCGGCAGCTGTaGCTCCTGTTCCAAGCGAGGGAGCCAGGGCTCCCGGAGATCAAA +
Preference number: 5 (lower is better)
Translates to: MAVRPPAHHHPTRQL*LLFQAREPGLPEIK
Trigger: TTTGATCTCCGGGAGCCCTGGCTCCCTCGCTTGGAACAGGAGCCACAGCTGCCGCGTGGGATGATGATGTGCTGGTGGACGGACAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521700.5
CDS-3UTR CAA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGCTCTGTCCAGACGCTaGGACTCCAGCACGATGAAC +
Preference number: 5 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHALSRR*DSSTMN
Trigger: GTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACAGGCTCCGCGATGCTaGGGGCCACGCACTGCATGG +
Preference number: 5 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPQAPRC*GPRTAW
Trigger: CCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAGGTGGGTTCACAGGTTaGCCCTCCACTCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEGGFTG*PSTRGR
Trigger: TCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACC...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTGTTGAACTTGTCCACTaGAATAGCCATTCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPVELVH*NSHSLA
Trigger: TGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAAC...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 90 bp GGCTGTAGTCGCCTGCTTTGTTGCTCTCGGGTGGGTTCACAGGTTTaGCCTCCACTCGGGGCCGAACGACCTGCCGAAAAGGACTGGACA +
Preference number: 5 (lower is better)
Translates to: GCSRLLCCSRVGSQV*PPLGAERPAEKDWT
Trigger: TGTCCAGTCCTTTTCGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS GCA 90 bp GGACAGCTTCCAGGGTCTTCACGTGGCTGTAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAGGTTTGCCCTCCACTCGGGGCCGAA +
Preference number: 5 (lower is better)
Translates to: GQLPGSSRGCSRLLC*SRVGSQVCPPLGAE
Trigger: TTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGACCCTGGAAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS GCA 90 bp CACTTGAATAGCCATTCGCTGGCACTCACCGGCGTGCAGGATGAGTaGCTCGCTGCTCCTGGTGCTGACGGTCAGCTCATGCTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: HLNSHSLALTGVQDE*LAAPGADGQLMLGG
Trigger: TCCACCGAGCATGAGCTGACCGTCAGCACCAGGAGCAGCGAGGCACTCATCCTGCACGCCGGTGAGTGCCAGCGAATGGCTATTCAAGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS GCA 90 bp GCACACTGGGCAGGCAGAACCAAGAGGGTGGCAGCTCCTTGCTGGTaGTGTCCTCGTGGAACCGGATGTGGAGGAAGAAGTCTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: AHWAGRTKRVAAPCW*CPRGTGCGGRSLPC
Trigger: ACACGGGAGACTTCTTCCTCCACATCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS GCA 90 bp CAGATTAGTACATGGCCCTCAGGTCACACAGTCTCCCCTTCTGGATaGTGGGAGTGGCAGGGCCAGCCTCTGACCCCAGGCTCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: QISTWPSGHTVSPSG*WEWQGQPLTPGSSP
Trigger: AGGACTGGAGCCTGGGGTCAGAGGCTGGCCCTGCCACTCCCAGCATCCAGAAGGGGAGACTGTGTGACCTGAGGGCCATGTACTAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS CCA 90 bp CACAGTAATCGTTCCAGTCGTCTGCGGGACCCCGACGAGCGTCACTaGGTACAGACCAGATTCAGCCGGAAGAGAAAGCGCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: HSNRSSRLRDPDERH*VQTRFSRKRKRRRE
Trigger: CTCCCTGCGGCGCTTTCTCTTCCGGCTGAATCTGGTCTGTACCCAGTGACGCTCGTCGGGGTCCCGCAGACGACTGGAACGATTACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000521667.5
ENST00000648948.2
CDS CCA 90 bp GAAAAGCTTCACGTGGCTGTAGTCGCCTGCTTTGTTGCTCTCGGGTaGGTTCACAGGTTTGCCCTCCACTCGGGGCCGAACGACCTGCCG +
Preference number: 5 (lower is better)
Translates to: EKLHVAVVACFVALG*VHRFALHSGPNDLP
Trigger: CGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS-3UTR CAA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCATGGCGGCCACGCGCTaGAAGAACGCAGACTTGCGA +
Preference number: 5 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLMAATR*KNADLR
Trigger: TCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCAT...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGATGGCGGCCACGCGCTaGAAGAACGCAGACTTGCGA +
Preference number: 5 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQMAATR*KNADLR
Trigger: TCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCAT...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCATCTCTCCTGCCAAGTaGCCCATGGGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLISPAK*PMGVSR
Trigger: CCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTATCTCTCCTGCCAAGTaGCCCATGGGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGISPAK*PMGVSR
Trigger: CCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGGGCCACAGGGTGACCTaGCTCCCAGCGAGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGGHRVT*LPAREV
Trigger: AACCTCCCTCGCTGGGAGCAAGGTCACCCTGTGGCC...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCCAGTCACCAATATGCTaGCCACTCAGAATCAAACAC +
Preference number: 5 (lower is better)
Translates to: PWAASPGLDICPPRVEGLQSPIC*PLRIKH
Trigger: GTGTTTGATTCTGAGTGGCAAGCATATTGGTGACTG...GAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGAGCAGTCAGGGTTGATGCCATaGGTGGTGAGGGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: YGQREVAGRGRSLCWDEQSGLMP*VVRAPG
Trigger: GCCAGGTGCCCTCACCACCAATGGCATCAACCCTGA...CTGCTCATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520857.5
CDS GCA 90 bp ACACGTGCACACTGGGCAGGCAGAACCAAGAGGGTGGCAGCTCCTTaGTGGTGCTGTCCTCGTGGAACCGGATGTGGAGGAAGAAGTCTC +
Preference number: 5 (lower is better)
Translates to: TRAHWAGRTKRVAAP*WCCPRGTGCGGRSL
Trigger: GAGACTTCTTCCTCCACATCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGCACGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS CCA 90 bp GACTTTGCGGTGGGTCTGGAAGTCACCCCACTCGTTGTTCTCGGGTaGGTAGTGGTGCCTGTAGCGGATGTAGAGGACTCGCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: DFAVGLEVTPLVVLG*VVVPVADVEDSLGV
Trigger: GACTCCCAGCGAGTCCTCTACATCCGCTACAGGCACCACTACCCACCCGAGAACAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTATGAGGCCCACGACTTaGCGGTGGGTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGMRPTT*RWVWKS
Trigger: TGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCAT...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGTCTGTGGCCAGTCCTaGGCCGAGAAGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAVCGQS*AEKQSV
Trigger: CACAGACTGCTTCTCGGCCAAGGACTGGCCACAGAC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CACCTGACGAGCCTGGTATCTGCTGGGGACCAAGGGCTGTTTATCCTCCCTGGGGCTCTGTCCAGACGCTaGGACTCCAGCACGATGAAC +
Preference number: 5 (lower is better)
Translates to: HLTSLVSAGDQGLFILPGALSRR*DSSTMN
Trigger: GTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGC...CCCAGGGAGGATAAACAGCCCTTGGTCCCCAGCAGATACCAGGCTCGTCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTCTTCCGCATGCGGCCTaGGCACCGCTTCTTGTAATG +
Preference number: 5 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGLPHAA*APLLVM
Trigger: CATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAG...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCAAGGACACGTACAGCCTaGATGCACGCTTCCAACTCA +
Preference number: 5 (lower is better)
Translates to: APGHRNGCRDPGTWAGWARTRTA*MHASNS
Trigger: TGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCCT...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CTCCTACGGCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAATGGCGGCCACGCGCTaGAAGAACGCAGACTTGCGA +
Preference number: 5 (lower is better)
Translates to: LLRHHLSCQVAHGGLQEEMAATR*KNADLR
Trigger: TCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCAT...TTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGACAGGCTCCGCGATGCTaGGGGCCACGCACTGCATGG +
Preference number: 5 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGQAPRC*GPRTAW
Trigger: CCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTG...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGCTGACGATGGGAAGCTaGGTGAAGGGCACCGGTGGC +
Preference number: 5 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMLTMGS*VKGTGG
Trigger: GCCACCGGTGCCCTTCACCAAGCTTCCCATCGTCAG...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWSFTLM*IVNVAT
Trigger: GGTGGCCACGTTCACAATCAACATCAAAGTGAAGCT...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGGTGGAGGGCCTCTCTaGGCATCAACCATCCACGAC +
Preference number: 5 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAGGGPL*ASTIHD
Trigger: GTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTTTCAATGGCGTATTTTaGGGCTCTGTTGAGGTTGAC +
Preference number: 5 (lower is better)
Translates to: PGLPAQAWTFAHHGWRASFNGVF*GSVEVD
Trigger: GTCAACCTCAACAGAGCCCAAAAATACGCCATTGAA...AGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTATCGCCTCTTTATACTaGTCAATTATGTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: ALGCQPRPGHLPTTGGGPIASLY*SIMSSG
Trigger: CCCTGAAGACATAATTGACAAGTATAAAGAGGCGAT...AGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGATCTCTCCTGCCAAGTaGCCCATGGGGGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMISPAK*PMGVSR
Trigger: CCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATGGTGGAGGGCCTCTCTaGGCATCAACCATCCACGAC +
Preference number: 5 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDGGGPL*ASTIHD
Trigger: GTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGACCTGGGGAGCTAAGGGTCAACACAGCCAGAAGCCTGCCCCCAGAACATCAGGGACGCTCATTTaGAAGTCCCAGTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGTWGAKGQHSQKPAPRTSGTLI*KSQSFR
Trigger: CCTGAAGGACTGGGACTTCAAAATGAGCGTCCCTGA...TGTTCTGGGGGCAGGCTTCTGGCTGTGTTGACCCTTAGCTCCCCAGGTCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS GCA 90 bp AACATATCCAAGAAGAGATGGGTGGGGACTACGACTGGCCTCAAGTaGCTCGTGTGTATGACGGCGTGGAGGCTGCTTGCTCCGAGTCCG +
Preference number: 5 (lower is better)
Translates to: NISKKRWVGTTTGLK*LVCMTAWRLLAPSP
Trigger: CGGACTCGGAGCAAGCAGCCTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGTAGTCCCCACCCATCTCTTCTTGGATATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS-3UTR CAA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTCCTGGCCGGTGTCTATaGGCTGCTTCAGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLPGRCL*AASAGR
Trigger: CCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGG...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGTCAGGGTTGATGCCATaGGTGGTGAGGGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSGLMP*VVRAPG
Trigger: TCCAGGTGCCCTCACCACCAATGGCATCAACCCTGA...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGAGGACACGTACAGCCTaGATGCACGCTTCCAACTCA +
Preference number: 5 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWRTRTA*MHASNS
Trigger: TGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCCT...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp AGGCCTGACTCCAGGTCACCTTCTCTACTGGGACAGAAAGGGTGCCCTGGGGGTTTGAAGAACGCAGACTaGCGATGGAAGCCGATCAGC +
Preference number: 5 (lower is better)
Translates to: RPDSRSPSLLGQKGCPGGLKNAD*RWKPIS
Trigger: GCTGATCGGCTTCCATCGCAAGTCTGCGTTCTTCAA...ACCCCCAGGGCACCCTTTCTGTCCCAGTAGAGAAGGTGACCTGGAGTCAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGGCCTCTCTTGGGAAGTTCAAACGGCATaGGGTTATATACCATCAGCT +
Preference number: 5 (lower is better)
Translates to: AASPGLDICPPRVEGLSWEVQTA*GYIPSA
Trigger: AGCTGATGGTATATAACCCAATGCCGTTTGAACTTC...CCAAGAGAGGCCCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGTGGGTTCACAGGTTaGCCCTCCACTCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: AVPSLMLTISFYGQREVAGGFTG*PSTRGR
Trigger: TCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACC...AGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCACGTTGAACTTGTCCACTaGAATAGCCATTCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: PQVTEMGAGILGPGLDGHVELVH*NSHSLA
Trigger: TGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAAC...GTGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGACCCAGCGAGGGAGGTTaGGGCCTGGGACTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRPSEGG*GLGLQV
Trigger: GACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGGG...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 90 bp AAGGGCAGACGGGGGTCGCAAGGCAGCAATGAGACAGAGAACCGATaGAATGATGGTCCAAGGGGAAGGCATCAAAGGCCTCGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: KGRRGSQGSNETENR*NDGPRGRHQRPRVQ
Trigger: CTGCACTCGAGGCCTTTGATGCCTTCCCCTTGGACCATCATTTCATCGGTTCTCTGTCTCATTGCTGCCTTGCGACCCCCGTCTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS CCA 90 bp GGAGCCGTAGATCTCCTTCTGCACGTGGAACTTCTCAAAGGTCTGTaGCCAGTCCTTGGCCGAGAAGCAGTCTGTGATGGTGATGAGGCC +
Preference number: 5 (lower is better)
Translates to: GAVDLLLHVELLKGL*PVLGREAVCDGDEA
Trigger: GGCCTCATCACCATCACAGACTGCTTCTCGGCCAAGGACTGGCCACAGACCTTTGAGAAGTTCCACGTGCAGAAGGAGATCTACGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTTCAGGGACGCTCATTTaGAAGTCCACAGCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLSGTLI*KSTAGG
Trigger: GCCACCGGCTGTGGACTTCAAAATGAGCGTCCCTGA...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438773.4
CDS-3UTR CAA 90 bp CAGATGACGGAGCATGACGGCTGCATGATTATGGGGTCACCGGGCCTGTCCTGGTGCTCCGTTTCTGAATaGCAAGGACACGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: QMTEHDGCMIMGSPGLSWCSVSE*QGHVQP
Trigger: AGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGCA...CCAGGACAGGCCCGGTGACCCCATAATCATGCAGCCGTCATGCTCCGTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GGGAGCCTCGAGCAGATGCTGAATGAGCTCCAGGAACTGAGGGCCACTGGACACTGCTCCGTTTCTGAATaGCAAGGACACGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: GSLEQMLNELQELRATGHCSVSE*QGHVQP
Trigger: AGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGCA...GTGTCCAGTGGCCCTCAGTTCCTGGAGCTCATTCAGCATCTGCTCGAGGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCTGGGGCTGGCAGAGCCAGGCTGTATTTGGGTCATTTTCCAGGAGGCCTGGGTCGCTCTTCTCCACGGTaGTGTGCGATAATTGGTGAA +
Preference number: 5 (lower is better)
Translates to: PGAGRARLYLGHFPGGLGRSSPR*CAIIGE
Trigger: TTCACCAATTATCGCACACAACCGTGGAGAAGAGCG...ACCCAGGCCTCCTGGAAAATGACCCAAATACAGCCTGGCTCTGCCAGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp AACAGCCCTGGGCTGCCAGCCCAGGCCTGGACATTTGCCCACCACGGGTGGAGGAAATCCAGCTTCACTTaGATGTTGATTGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: NSPGLPAQAWTFAHHGWRKSSFT*MLIVNV
Trigger: CACGTTCACAATCAACATCAAAGTGAAGCTGGATTT...CCTCCACCCGTGGTGGGCAAATGTCCAGGCCTGGGCTGGCAGCCCAGGGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTCATGCTCGGTGGAGTaGAAGACATCCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDSCSVE*KTSRSR
Trigger: CCTGCTCCTGGATGTCTTCAACTCCACCGAGCATGA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 90 bp GTCTGTGGCTCTGTCCAGACGCTTGGACTCCAGCACGATGAACAGTaGCTCGATGAAGTCCTCGATTCTCTTCTCCACCGTCTGGCAGTC +
Preference number: 5 (lower is better)
Translates to: VCGSVQTLGLQHDEQ*LDEVLDSLLHRLAV
Trigger: GACTGCCAGACGGTGGAGAAGAGAATCGAGGACTTCATCGAGTCACTGTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGCCACAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CCA 90 bp TCTCCCCCTGCAGCCCGAAGACAAAGAGCCGGGAGTCATACAGTGTaGAGCCGTAGATCTCCTTCTGCACGTGGAACTTCTCAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SPPAARRQRAGSHTV*SRRSPSARGTSQRS
Trigger: AGACCTTTGAGAAGTTCCACGTGCAGAAGGAGATCTACGGCTCCACACTGTATGACTCCCGGCTCTTTGTCTTCGGGCTGCAGGGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CCA 90 bp TTCACAGGGAAACATATCCAAGAAGAGATGGGTGGGGACTACGACTaGCCTCAAGTGCCTCGTGTGTATGACGGCGTGGAGGCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: FTGKHIQEEMGGDYD*PQVPRVYDGVEAAC
Trigger: GCAAGCAGCCTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGTAGTCCCCACCCATCTCTTCTTGGATATGTTTCCCTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCCTTCCGCATGCGGCCTaGGCACCGCTTCTTGTAATG +
Preference number: 5 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTALPHAA*APLLVM
Trigger: CATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAG...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GTCTCAGCGTTTGCTTATGTGAGATCTCTAACTCAGAACCCGTCCCTTCCTGGGCCTGGCCGGTGTCTATaGGCTGCTTCAGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: VSAFAYVRSLTQNPSLPGPGRCL*AASAGR
Trigger: CCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAGG...CCCAGGAAGGGACGGGTTCTGAGTTAGAGATCTCACATAAGCAAACGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCATTGAAGAACGCAGACTaGCGATGGAAGCCGATCAGC +
Preference number: 5 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPLKNAD*RWKPIS
Trigger: GCTGATCGGCTTCCATCGCAAGTCTGCGTTCTTCAA...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGCCTCTGCTGAAATCTTaGGGATCCAGCGACAGACTG +
Preference number: 5 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGPLLKS*GSSDRL
Trigger: CAGTCTGTCGCTGGATCCCAAAGATTTCAGCAGAGG...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCACCTCTGCTGAAATCTTaGGGATCCAGCGACAGACTG +
Preference number: 5 (lower is better)
Translates to: PTPSGCAQSHAHHFFLWPPLLKS*GSSDRL
Trigger: CAGTCTGTCGCTGGATCCCAAAGATTTCAGCAGAGG...TGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCATTCACACACATCTCCTaGAACCCACTGGAAATCTAT +
Preference number: 5 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAFTHIS*NPLEIY
Trigger: ATAGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAA...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp AGGGCTGAAGAGACCGCCCTGGGGTCTCCACCCCCTACTGCAGCCAGACCTTCTTTCACACACATCTCCTaGAACCCACTGGAAATCTAT +
Preference number: 5 (lower is better)
Translates to: RAEETALGSPPPTAARPSFTHIS*NPLEIY
Trigger: ATAGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAA...AGAAGGTCTGGCTGCAGTAGGGGGTGGAGACCCCAGGGCGGTCTCTTCAGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCGGGCCTCCAGAGTATTaGAAATTCAGGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: APSLLPSCPWGSPGRKPAGPPEY*KFRTAS
Trigger: GGAAGCTGTCCTGAATTTCAAATACTCTGGAGGCCC...GGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCCCCAGGTCACAGAAATGGGTGCAGGGATCCTGGGACCTGGGCTGGATGGGCATATTTTTGGGCTCTGTaGAGGTTGACACACATGGAT +
Preference number: 5 (lower is better)
Translates to: APGHRNGCRDPGTWAGWAYFWAL*RLTHMD
Trigger: ATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATA...TGCCCATCCAGCCCAGGTCCCAGGATCCCTGCACCCATTTCTGTGACCTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAACTGACGATGGGAAGCTaGGTGAAGGGCACCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GVDKWLSWSSASQTSSFELTMGS*VKGTGG
Trigger: GCCACCGGTGCCCTTCACCAAGCTTCCCATCGTCAG...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTAGCAAGCTTTTCATTTaGTGTGGCCGGAGGCTAGCA +
Preference number: 5 (lower is better)
Translates to: HHLSCQVAHGGLQEENQPSKLFI*CGRRLA
Trigger: TGCTAGCCTCCGGCCACACAAAATGAAAAGCTTGCT...AGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 90 bp TCCGAGCTCCACTCTTCCCACCAGTTCCACCAGGATAGTGATAGATaGCAGAAGCTGAACACAATCCTTCCAGGGCAGCTCCAAGCCACA +
Preference number: 5 (lower is better)
Translates to: SELHSSHQFHQDSDR*QKLNTILPGQLQAT
Trigger: TGTGGCTTGGAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTATCACTATCCTGGTGGAACTGGTGGGAAGAGTGGAGCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 90 bp GATTCCTGTAATATCCTTCAGTGTGGCCCGGGCCTCCAGAGTATTTaGAATTCAGGACAGCTTCCAGGGTCTCCAACTCCTCAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: DSCNILQCGPGLQSI*NSGQLPGSPTPQAQ
Trigger: CTGGGCCTGAGGAGTTGGAGACCCTGGAAGCTGTCCTGAATTTCAAATACTCTGGAGGCCCGGGCCACACTGAAGGATATTACAGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523777.5
CDS TCA 90 bp TCTGGTGGTCCTCAGCACACTGCATGTAGTCAGGGACGCTCATTTTaGAGTCCCAGTCCTTCAGGGCGCGCAGCTCAAATTTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: SGGPQHTACSQGRSF*SPSPSGRAAQISLP
Trigger: AGGAAGTGAAATTTGAGCTGCGCGCCCTGAAGGACTGGGACTTCAAAATGAGCGTCCCTGACTACATGCAGTGTGCTGAGGACCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS-3UTR CAA 90 bp ATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTGGGAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: ISPAKLPMGVSRKKTSLGSFTLM*IVNVAT
Trigger: GGTGGCCACGTTCACAATCAACATCAAAGTGAAGCT...CCCAAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGTTGAACTTGTCCACTaGAATAGCCATTCGCTGGCA +
Preference number: 5 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMVELVH*NSHSLA
Trigger: TGCCAGCGAATGGCTATTCAAGTGGACAAGTTCAAC...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTTGGGCTCTGTTGAGGTaGACACACATGGATGCTGTT +
Preference number: 5 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLWALLR*THMDAV
Trigger: AACAGCATCCATGTGTGTCAACCTCAACAGAGCCCA...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 90 bp GATTCCTGTAATATCCTTCAGTGTGGCCCGGGCCTCCAGAGTATTTaGAATTCAGGACAGCTTCCAGGGTCTTCACGTGGCTGTAGTCGC +
Preference number: 5 (lower is better)
Translates to: DSCNILQCGPGLQSI*NSGQLPGSSRGCSR
Trigger: GCGACTACAGCCACGTGAAGACCCTGGAAGCTGTCCTGAATTTCAAATACTCTGGAGGCCCGGGCCACACTGAAGGATATTACAGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS GCA 90 bp AGCTTCACTTTGATGTTGATTGTGAACGTGGCCACCTTCCCAGGCTaGAAAGGGAACTGGGCAAGGGTTTCCTCTAGCTTCCAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: SFTLMLIVNVATFPG*KGNWARVSSSFQLK
Trigger: CTTGAGCTGGAAGCTAGAGGAAACCCTTGCCCAGTTCCCTTTGCAGCCTGGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000634178.1
ENST00000648948.2
CDS-3UTR CAA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAATCAGGGTTGATGCCATaGGTGGTGAGGGCACCTGGA +
Preference number: 5 (lower is better)
Translates to: GVDKWLSWSSASQTSSFESGLMP*VVRAPG
Trigger: TCCAGGTGCCCTCACCACCAATGGCATCAACCCTGA...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAGGGCCTCCAGAGTATTaGAAATTCAGGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PSGCAQSHAHHFFLWPKGGPPEY*KFRTAS
Trigger: GGAAGCTGTCCTGAATTTCAAATACTCTGGAGGCCC...TCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp GGGGAGGCAGGCCATTTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCTGGGCTCTGTTGAGGTaGACACACATGGATGCTGTT +
Preference number: 5 (lower is better)
Translates to: GEAGHLLKNCLQTWTHTAWALLR*THMDAV
Trigger: AACAGCATCCATGTGTGTCAACCTCAACAGAGCCCA...GGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAAATGGCCTGCCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GGTGGAGGGCCTCTCTTGGCATCAACCATCCACGACCTCCTACGGCACCATCTCTCATCCTGCAATGTGTaGTTTCATTCAATGGCGTAT +
Preference number: 5 (lower is better)
Translates to: GGGPLLASTIHDLLRHHLSSCNV*FHSMAY
Trigger: ATACGCCATTGAATGAAACAACACATTGCAGGATGA...GAGATGGTGCCGTAGGAGGTCGTGGATGGTTGATGCCAAGAGAGGCCCTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GCTGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGCAGTCACCAATATGCTaGCCACTCAGAATCAAACAC +
Preference number: 5 (lower is better)
Translates to: AAHALRLCPVSCSPFLSMQSPIC*PLRIKH
Trigger: GTGTTTGATTCTGAGTGGCAAGCATATTGGTGACTG...CATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 90 bp CAGACTTGCGATGGAAGCCGATCAGCTCATAGAGCTCGGAGAGGATaGTGTAGCGCTGAATTTTCTCTTCCTCAGAAAGCTGTCGAAGGT +
Preference number: 5 (lower is better)
Translates to: QTCDGSRSAHRARRG*CSAEFSLPQKAVEG
Trigger: ACCTTCGACAGCTTTCTGAGGAAGAGAAAATTCAGCGCTACAGCATCCTCTCCGAGCTCTATGAGCTGATCGGCTTCCATCGCAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAAGCAAGCTTTTCATTTaGTGTGGCCGGAGGCTAGCA +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRSKLFI*CGRRLA
Trigger: TGCTAGCCTCCGGCCACACAAAATGAAAAGCTTGCT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ACAGCAAACAGCAGGCATCAAGGGATGGGGGTTGCTACACAGTATCTAGGACCCAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: TANSRHQGMGVATQYLGPSFTLM*IVNVAT
Trigger: GGTGGCCACGTTCACAATCAACATCAAAGTGAAGCT...GGGTCCTAGATACTGTGTAGCAACCCCCATCCCTTGATGCCTGCTGTTTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CAA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTACACATGGATGCTGTTaGTTCCATTCAGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLTHGCC*FHSETA
Trigger: GGCTGTTTCTGAATGGAACAAACAGCATCCATGTGT...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TGCCCACGCCCTCAGGCTGTGCCCAGTCTCATGCTCACCATTTCTTTCTATGGCTATTTTTGGGCTCTGTaGAGGTTGACACACATGGAT +
Preference number: 5 (lower is better)
Translates to: CPRPQAVPSLMLTISFYGYFWAL*RLTHMD
Trigger: ATCCATGTGTGTCAACCTCAACAGAGCCCAAAAATA...GCCATAGAAAGAAATGGTGAGCATGAGACTGGGCACAGCCTGAGGGCGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAATGAGGCCCACGACTTaGCGGTGGGTCTGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETMRPTT*RWVWKS
Trigger: TGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCAT...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TTGGGCTCTGTTGAGGTTGACACACATGGATGCTGTTTGTTCCATTCAGAAACAGGAAGAAAACCAGCCTaGGGGGATTCCAAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LGSVEVDTHGCCLFHSETGRKPA*GDSKAQ
Trigger: CTGGGCCTTGGAATCCCCCAAGGCTGGTTTTCTTCC...TGTTTCTGAATGGAACAAACAGCATCCATGTGTGTCAACCTCAACAGAGCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATTCATCCTGCAATGTGTaGTTTCATTCAATGGCGTAT +
Preference number: 5 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDSSCNV*FHSMAY
Trigger: ATACGCCATTGAATGAAACAACACATTGCAGGATGA...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 90 bp ACTCTTCCCACCAGTTCCACCAGGATAGTGATAGATGACAGAAGCTaGACACAATCCTTCCAGGGCAGCTCCAAGCCACAGAAAGTCATT +
Preference number: 5 (lower is better)
Translates to: TLPTSSTRIVIDDRS*TQSFQGSSKPQKVI
Trigger: AATGACTTTCTGTGGCTTGGAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTATCACTATCCTGGTGGAACTGGTGGGAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp ACCATCTCTCCTGCCAAGTTGCCCATGGGGGTCTCCAGGAAGAAAACCAGCCTTATCGCCTCTTTATACTaGTCAATTATGTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: TISPAKLPMGVSRKKTSLIASLY*SIMSSG
Trigger: CCCTGAAGACATAATTGACAAGTATAAAGAGGCGAT...AAGGCTGGTTTTCTTCCTGGAGACCCCCATGGGCAACTTGGCAGGAGAGATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TTATTGAAGAACTGCTTGCAGACATGGACACACACAGCCATGGTAACCAGACGCCGCTCTTCTCCACGGTaGTGTGCGATAATTGGTGAA +
Preference number: 5 (lower is better)
Translates to: LLKNCLQTWTHTAMVTRRRSSPR*CAIIGE
Trigger: TTCACCAATTATCGCACACAACCGTGGAGAAGAGCG...GCGTCTGGTTACCATGGCTGTGTGTGTCCATGTCTGCAAGCAGTTCTTCAATAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGTGGGTTCACAGGTTaGCCCTCCACTCGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGGFTG*PSTRGR
Trigger: TCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATCCCAGCGAGGGAGGTTaGGGCCTGGGACTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: SESNTARVFHIGFSRLLYPSEGG*GLGLQV
Trigger: GACCTGAAGTCCCAGGCCCAAACCTCCCTCGCTGGG...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGATTCAATGGCGTATTTTaGGGCTCTGTTGAGGTTGAC +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRFNGVF*GSVEVD
Trigger: GTCAACCTCAACAGAGCCCAAAAATACGCCATTGAA...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAGGGAGGTCCCTCTGCTGGGATCTTAATTTAAGTAACTaGTCCAAGGTCAAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SFYGQREVAGRGRSLCWDLNLSN*SKVKEL
Trigger: CAACTCCTTGACCTTGGACAAGTTACTTAAATTAAG...ATCCCAGCAGAGGGACCTCCCTCGTCCAGCGACTTCCCTTTGGCCATAGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 90 bp ATGCTTCCATGCTCCGTTTCTGAATTGCAAGGACACGTACAGCCTTaGTGCACGCTTCCAACTCAATCACTCCCGCATTCTTATACTTGC +
Preference number: 5 (lower is better)
Translates to: MLPCSVSELQGHVQP*CTLPTQSLPHSYTC
Trigger: GCAAGTATAAGAATGCGGGAGTGATTGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGCATGGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 90 bp GTAGAAATAATACAGGATGTGCAGTCGGAATTCAGTTCAATTCAGTaGACATGTCTGCCTCCTACACTGAGCCGTGAGCTCTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: VEIIQDVQSEFSSIQ*TCLPPTLSRELSGQ
Trigger: CTGTCCTGAGAGCTCACGGCTCAGTGTAGGAGGCAGACATGTGCACTGAATTGAACTGAATTCCGACTGCACATCCTGTATTATTTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518839.1
ENST00000520532.5
CDS CCA 90 bp CAGGCCCAGCCTTCTCTAGCACACAGCATGTCTTCAAAGCAAGCCTaGGAACCAAATCAAATTGAAGCGTGCTTAACAAGCAAAGGATGT +
Preference number: 5 (lower is better)
Translates to: QAQPSLAHSMSSKQA*EPNQIEACLTSKGC
Trigger: ACATCCTTTGCTTGTTAAGCACGCTTCAATTTGATTTGGTTCCCAGGCTTGCTTTGAAGACATGCTGTGTGCTAGAGAAGGCTGGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523777.5
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGATTCACACACATCTCCTaGAACCCACTGGAAATCTAT +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRFTHIS*NPLEIY
Trigger: ATAGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAA...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 90 bp CTTTGCAGGTCTGAGGTAAGGAAAATGCTTCTGCTCACCCATAGGTaGCCAAAAAGGCCGATGATTCTTCGAACTCATCCTGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: LCRSEVRKMLLLTHR*PKRPMILRTHPDSN
Trigger: ATTGCTGTCAGGATGAGTTCGAAGAATCATCGGCCTTTTTGGTCACCTATGGGTGAGCAGAAGCATTTTCCTTACCTCAGACCTGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS CCA 90 bp GCTGGTGAGCAGCCCCATGTTTTCAACTCGAAGTTCAAACGGCATTaGGTTATATACCATCAGCTGAACTTCACACACATCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AGEQPHVFNSKFKRH*VIYHQLNFTHISLN
Trigger: GTTCAAGGAGATGTGTGTGAAGTTCAGCTGATGGTATATAACCCAATGCCGTTTGAACTTCGAGTTGAAAACATGGGGCTGCTCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000521667.5
ENST00000648948.2
CDS CCA 90 bp CTCACACTGATTCCATCATCACTGAGATCCTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTCACTTTGATGTTGATTGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: LTLIPSSLRSCRRFS*QEKSSFTLMLIVNV
Trigger: CACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGATGGAATCAGTGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CCA 90 bp TTAGGAAAGCGCTTACCATCACTGAGATCCTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTCACTTTGATGTTGATTGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: LGKRLPSLRSCRRFS*QEKSSFTLMLIVNV
Trigger: CACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGGTAAGCGCTTTCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS-3UTR CAA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGGTCTGTGGCCAGTCCTaGGCCGAGAAGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: HIGFSRLLYASISNLDLWVCGQS*AEKQSV
Trigger: CACAGACTGCTTCTCGGCCAAGGACTGGCCACAGAC...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAATCGCCTCTTTATACTaGTCAATTATGTCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRIASLY*SIMSSG
Trigger: CCCTGAAGACATAATTGACAAGTATAAAGAGGCGAT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CCCAGTCTCATGCTCACCATTTCTTTCTATGGCCAAAGGGAAGTCGCTGGACGAAAATCCAGCTTCACTTaGATGTTGATTGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: PSLMLTISFYGQREVAGRKSSFT*MLIVNV
Trigger: CACGTTCACAATCAACATCAAAGTGAAGCTGGATTT...TCGTCCAGCGACTTCCCTTTGGCCATAGAAAGAAATGGTGAGCATGAGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACCAGCTGCTTGGGGTTaGCAAATTGCCCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLPAAWG*QIAPSP
Trigger: GGGAGAAGGGGCAATTTGCAAACCCCAAGCAGCTGG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GGAGTTGACAAGTGGCTGAGCTGGAGTTCAGCATCTCAGACATCTTCCTTTGAAACACATGGATGCTGTTaGTTCCATTCAGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: GVDKWLSWSSASQTSSFETHGCC*FHSETA
Trigger: GGCTGTTTCTGAATGGAACAAACAGCATCCATGTGT...TTCAAAGGAAGATGTCTGAGATGCTGAACTCCAGCTCAGCCACTTGTCAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGGATGGGCACCCGCTTaGGGATTTCCTCTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SESNTARVFHIGFSRLLYGWAPA*GFPLLQ
Trigger: CTGAAGCAGAGGAAATCCCAAAGCGGGTGCCCATCC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTATTGAAGAACGCAGACTaGCGATGGAAGCCGATCAGC +
Preference number: 5 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLLKNAD*RWKPIS
Trigger: GCTGATCGGCTTCCATCGCAAGTCTGCGTTCTTCAA...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 90 bp AGAAAGCTGTCGAAGGTTAATGTAAACTGCATTCTGAAGAAATTCTaGTGCTTCCATGCTCCGTTTCTGAATTGCAAGGACACGTACAGC +
Preference number: 5 (lower is better)
Translates to: RKLSKVNVNCILKKF*CFHAPFLNCKDTYS
Trigger: GCTGTACGTGTCCTTGCAATTCAGAAACGGAGCATGGAAGCATCAGAATTTCTTCAGAATGCAGTTTACATTAACCTTCGACAGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS-3UTR CAA 90 bp CATATTGGCTTTTCTAGGCTTCTATATGCATCTATATCTAATCTGGATCTGTGGCGCTCTTCTCCACGGTaGTGTGCGATAATTGGTGAA +
Preference number: 5 (lower is better)
Translates to: HIGFSRLLYASISNLDLWRSSPR*CAIIGE
Trigger: TTCACCAATTATCGCACACAACCGTGGAGAAGAGCG...CCACAGATCCAGATTAGATATAGATGCATATAGAAGCCTAGAAAAGCCAATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp GTTAACAAAGTGCCCAGGAGATGTCTCAGGCAGCTTGAGTTAATGAATGACAAGAAATCCAGCTTCACTTaGATGTTGATTGTGAACGTG +
Preference number: 5 (lower is better)
Translates to: VNKVPRRCLRQLELMNDKKSSFT*MLIVNV
Trigger: CACGTTCACAATCAACATCAAAGTGAAGCTGGATTT...CTTGTCATTCATTAACTCAAGCTGCCTGAGACATCTCCTGGGCACTTTGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS TCA 90 bp TTCTACATGGTTTCCAATTATTCCTCTGGCAATTTACATTCTCAGTaGGGCAGCAGGCTCTATGATCTTCTTGAGATGGGTGATTCAAAG +
Preference number: 5 (lower is better)
Translates to: FYMVSNYSSGNLHSQ*GSRLYDLLEMGDSK
Trigger: CTTTGAATCACCCATCTCAAGAAGATCATAGAGCCTGCTGCCTCACTGAGAATGTAAATTGCCAGAGGAATAATTGGAAACCATGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521667.5
CDS-3UTR CAA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACC +
Preference number: 5 (lower is better)
Translates to: SESNTARVFHIGFSRLLYSFTLM*IVNVAT
Trigger: GGTGGCCACGTTCACAATCAACATCAAAGTGAAGCT...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp TCAGAATCAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGAAGTTCAAACGGCATaGGGTTATATACCATCAGCT +
Preference number: 5 (lower is better)
Translates to: SESNTARVFHIGFSRLLYEVQTA*GYIPSA
Trigger: AGCTGATGGTATATAACCCAATGCCGTTTGAACTTC...ATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTGATTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS-3UTR CAA 90 bp CAAACACTGCCAGAGTTTTCCATATTGGCTTTTCTAGGCTTCTATATGCATCTACTTAATTTAAGTAACTaGTCCAAGGTCAAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: QTLPEFSILAFLGFYMHLLNLSN*SKVKEL
Trigger: CAACTCCTTGACCTTGGACAAGTTACTTAAATTAAG...TAGATGCATATAGAAGCCTAGAAAAGCCAATATGGAAAACTCTGGCAGTGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 72 bp GTGAGGGCGAAGGGCCCTACGCTGCGCGGGCTCCGGTaGGTCAGCCGCACCTCCAGGCGCACGGGGTCGCCC +
Preference number: 6 (lower is better)
Translates to: VRAKGPTLRGLR*VSRTSRRTGSP
Trigger: GGGCGACCCCGTGCGCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCGCCCTCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS GCA 72 bp CCCACGACCTGGCGGGCAGCGGGGCCGAGCAGCCTCTaGGGCCACTTCCCAGGCTCTGGGCTGGCGCTTCCT +
Preference number: 6 (lower is better)
Translates to: PTTWRAAGPSSL*GHFPGSGLALP
Trigger: AGGAAGCGCCAGCCCAGAGCCTGGGAAGTGGCCGCAGAGGCTGCTCGGCCCCGCTGCCCGCCAGGTCGTGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438773.4
CDS CAA 90 bp GGGACCACAGTGAGGGCGAAGGGCCCTACGCTGCGCGGGCTCCGGTaGGTCAGCCGCACCTCCAGGCGCACGGGGTCGCCCACCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GTTVRAKGPTLRGLR*VSRTSRRTGSPTWQ
Trigger: CTGCCAGGTGGGCGACCCCGTGCGCCTGGAGGTGCGGCTGACCAACCGGAGCCCGCGCAGCGTAGGGCCCTTCGCCCTCACTGTGGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS TCA 72 bp GCACGCCGTTCTGGTGGTCCTGGAAGGGGACCACAGTaGGGGCGAAGGGCCCTACGCTGCGCGGGCTCCGGT +
Preference number: 6 (lower is better)
Translates to: ARRSGGPGRGPQ*GRRALRCAGSG
Trigger: ACCGGAGCCCGCGCAGCGTAGGGCCCTTCGCCCTCACTGTGGTCCCCTTCCAGGACCACCAGAACGGCGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS GCA 72 bp GGAGTTTGTAGCAGGCCCTCCACCCAGGCTCCGCGATaGTTGGGGCCACGCACTGCATGGCGGCCACGCGCT +
Preference number: 6 (lower is better)
Translates to: GVCSRPSTQAPR*LGPRTAWRPRA
Trigger: AGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGTGGAGGGCCTGCTACAAACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 72 bp AGGCGGGCTCAGGCCTGCGCCTCCAGGGCACACACGTaGACACTGGGCAGGCAGAACCAAGAGGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: RRAQACASRAHT*TLGRQNQEGGS
Trigger: GCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGCACGTGTGTGCCCTGGAGGCGCAGGCCTGAGCCCGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS CCA 72 bp GGCCGGACGGCTGCACCGCGTCGAGGTAGAAGGTGCTaGAGCCCACGAAGGAGACGGTGTCGTGCAGGTCGT +
Preference number: 6 (lower is better)
Translates to: GRTAAPRRGRRC*SPRRRRCRAGR
Trigger: ACGACCTGCACGACACCGTCTCCTTCGTGGGCTCCAGCACCTTCTACCTCGACGCGGTGCAGCCGTCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS CAA 72 bp AGCCTGGGCCGGCTTCCCCCTGTGTGGCGCGCGGTCTaGATCCCCAGCTGGCACCATGGCACTCCCGACTTT +
Preference number: 6 (lower is better)
Translates to: SLGRLPPVWRAV*IPSWHHGTPDF
Trigger: AAAGTCGGGAGTGCCATGGTGCCAGCTGGGGATCAAGACCGCGCGCCACACAGGGGGAAGCCGGCCCAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS GCA 72 bp GGCAGTCCTCGTAGTTGGGGTAGAAAGCCACGTCGGTaGGCGGCTGCTCCACGATCTCCCCCTGCAGCCCGA +
Preference number: 6 (lower is better)
Translates to: GSPRSWGRKPRR*AAAPRSPPAAR
Trigger: TCGGGCTGCAGGGGGAGATCGTGGAGCAGCCGCGCACCGACGTGGCTTTCTACCCCAACTACGAGGACTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 72 bp CTCCACCCAGGCTCCGCGATGCTTGGGGCCACGCACTaGATGGCGGCCACGCGCTTGAAGAACGCAGACTTG +
Preference number: 6 (lower is better)
Translates to: LHPGSAMLGATH*MAATRLKNADL
Trigger: CAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 72 bp ACTGGCCGGACGGCTGCACCGCGTCGAGGTAGAAGGTaGTGGAGCCCACGAAGGAGACGGTGTCGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: TGRTAAPRRGRR*WSPRRRRCRAG
Trigger: ACCTGCACGACACCGTCTCCTTCGTGGGCTCCAGCACCTTCTACCTCGACGCGGTGCAGCCGTCCGGCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS CCA 72 bp TTTGTAGCAGGCCCTCCACCCAGGCTCCGCGATGCTTaGGGCCACGCACTGCATGGCGGCCACGCGCTTGAA +
Preference number: 6 (lower is better)
Translates to: FVAGPPPRLRDA*GHALHGGHALE
Trigger: TTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCATCGCGGAGCCTGGGTGGAGGGCCTGCTACAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CCA 72 bp CGTCCACCAGCACATCATCATCCCACGCGGCAGCTGTaGCTCCTGTTCCAAGCGAGGGAGCCAGGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: RPPAHHHPTRQL*LLFQAREPGLP
Trigger: CGGGAGCCCTGGCTCCCTCGCTTGGAACAGGAGCCACAGCTGCCGCGTGGGATGATGATGTGCTGGTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521700.5
CDS CAA 90 bp TCGCCACTGCGCTTCAGGGAGGGGATTCTCCAGCAGATGCCCAGCTaGCTGTGGATCTCCAGGCCTCGGGCTTCCCGCCGCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SPLRFREGILQQMPS*LWISRPRASRRSSS
Trigger: GGAGGAAGAGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCTGAAGCGCAGTGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS GCA 72 bp GCCACGTCGGTGCGCGGCTGCTCCACGATCTCCCCCTaGAGCCCGAAGACAAAGAGCCGGGAGTCATACAGT +
Preference number: 6 (lower is better)
Translates to: ATSVRGCSTISP*SPKTKSRESYS
Trigger: ACTGTATGACTCCCGGCTCTTTGTCTTCGGGCTGCAGGGGGAGATCGTGGAGCAGCCGCGCACCGACGTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 72 bp GCTTCAGGGAGGGGATTCTCCAGCAGATGCCCAGCTTaGTGTGGATCTCCAGGCCTCGGGCTTCCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: ASGRGFSSRCPA*CGSPGLGLPAA
Trigger: AGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCTGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS GCA 72 bp GGGAAGAAACGACGTGGTGCTGCAGAAGGAGCCTCCTaGCCTCCCGAGGTTCCTCTGGTGGCCTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: GKKRRGAAEGAS*PPEVPLVASGW
Trigger: CCAGCCAGAGGCCACCAGAGGAACCTCGGGAGGGCAGGAGGCTCCTTCTGCAGCACCACGTCGTTTCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522504.5
CDS CCA 72 bp AGGGAGGGGATTCTCCAGCAGATGCCCAGCTTGCTGTaGATCTCCAGGCCTCGGGCTTCCCGCCGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: REGILQQMPSLL*ISRPRASRRSS
Trigger: GGAAGAGCGGCGGGAAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CCA 72 bp TGCAGAGGCGCCAGCTGCAGGTGCTCCAGGACGAGCTaGTTCAGGAGTCCTTCCACACTCGCCTCGCCACTG +
Preference number: 6 (lower is better)
Translates to: CRGASCRCSRTS*FRSPSTLASPL
Trigger: CAGTGGCGAGGCGAGTGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CCA 72 bp CTGCAGAAGGAGCCTCCTGCCCTCCCGAGGTTCCTCTaGTGGCCTCTGGCTGGAGAGACTGTCCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: LQKEPPALPRFL*WPLAGETVHRL
Trigger: GAGCCTGTGGACAGTCTCTCCAGCCAGAGGCCACCAGAGGAACCTCGGGAGGGCAGGAGGCTCCTTCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522504.5
CDS TCA 72 bp TGGGGACTACGACTGGCCTCAAGTGCCTCGTGTGTATaGCGGCGTGGAGGCTGCTTGCTCCGAGTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: WGLRLASSASCV*RRGGCLLRVRS
Trigger: GCTCCGGACTCGGAGCAAGCAGCCTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGTAGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS GCA 72 bp CGCCACTGCGCTTCAGGGAGGGGATTCTCCAGCAGATaGCCAGCTTGCTGTGGATCTCCAGGCCTCGGGCTT +
Preference number: 6 (lower is better)
Translates to: RHCASGRGFSSR*PACCGSPGLGL
Trigger: AAGCCCGAGGCCTGGAGATCCACAGCAAGCTGGGCATCTGCTGGAGAATCCCCTCCCTGAAGCGCAGTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CAA 90 bp CCCTGCCTGCAGGCACAGGTCCCCCACGTGCTTCCGCATGCGGCCTaGGCACCGCTTCTTGTAATGTCTGCTGTCTGTGTCCAGTCCTAC +
Preference number: 6 (lower is better)
Translates to: PCLQAQVPHVLPHAA*APLLVMSAVCVQSY
Trigger: GTAGGACTGGACACAGACAGCAGACATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTGCCTGCAGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 72 bp TGCTTGGGGCCACGCACTGCATGGCGGCCACGCGCTTaGAGAACGCAGACTTGCGATGGAAGCCGATCAGCT +
Preference number: 6 (lower is better)
Translates to: CLGPRTAWRPRA*RTQTCDGSRSA
Trigger: AGCTGATCGGCTTCCATCGCAAGTCTGCGTTCTTCAAGCGCGTGGCCGCCATGCAGTGCGTGGCCCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 72 bp CTGCCTGCAGGCACAGGTCCCCCACGTGCTTCCGCATaGGGCCTTGGCACCGCTTCTTGTAATGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: LPAGTGPPRASA*GLGTASCNVCC
Trigger: ACAGCAGACATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTGCCTGCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS GCA 72 bp GCCGGTGTCTATTGGCTGCTTCAGCAGGAAGGGTGCTaGCCTGGAACCTCCGAGCTCCACTCTTCCCACCAG +
Preference number: 6 (lower is better)
Translates to: AGVYWLLQQEGC*PGTSELHSSHQ
Trigger: CTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521944.1
ENST00000648948.2
CDS GCA 72 bp CTGGCCGGTGTCTATTGGCTGCTTCAGCAGGAAGGGTaGTGCCCTGGAACCTCCGAGCTCCACTCTTCCCAC +
Preference number: 6 (lower is better)
Translates to: LAGVYWLLQQEG*CPGTSELHSSH
Trigger: GTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACACCGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521944.1
ENST00000648948.2
CDS GCA 72 bp CGCCTGCTTTGTTGCTCTCGGGTGGGTTCACAGGTTTaGCCTCCACTCGGGGCCGAACGACCTGCCGAAAAG +
Preference number: 6 (lower is better)
Translates to: RLLCCSRVGSQV*PPLGAERPAEK
Trigger: CTTTTCGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS GCA 72 bp ACCAGCACATCCCACTGCAGAGGCGCCAGCTGCAGGTaGTCCAGGACGAGCTGGTTCAGGAGTCCTTCCACA +
Preference number: 6 (lower is better)
Translates to: TSTSHCRGASCR*SRTSWFRSPST
Trigger: TGTGGAAGGACTCCTGAACCAGCTCGTCCTGGAGCACCTGCAGCTGGCGCCTCTGCAGTGGGATGTGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000523777.5
ENST00000524162.5
ENST00000648948.2
CDS CCA 72 bp CGTTCCAGTCGTCTGCGGGACCCCGACGAGCGTCACTaGGTACAGACCAGATTCAGCCGGAAGAGAAAGCGC +
Preference number: 6 (lower is better)
Translates to: RSSRLRDPDERH*VQTRFSRKRKR
Trigger: GCGCTTTCTCTTCCGGCTGAATCTGGTCTGTACCCAGTGACGCTCGTCGGGGTCCCGCAGACGACTGGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000521667.5
ENST00000648948.2
CDS CCA 72 bp CTGAAGAAGTTCTCCTCGGAGACGATGCCCACAGGCTaGACCACCACGAGCAGCGTCTGGTGGTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: LKKFSSETMPTG*TTTSSVWWSSA
Trigger: TGCTGAGGACCACCAGACGCTGCTCGTGGTGGTCCAGCCTGTGGGCATCGTCTCCGAGGAGAACTTCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CCA 72 bp CGATTCTCTTCTCCACCGTCTGGCAGTCCTCGTAGTTaGGGTAGAAAGCCACGTCGGTGCGCGGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RFSSPPSGSPRS*GRKPRRCAAAP
Trigger: TGGAGCAGCCGCGCACCGACGTGGCTTTCTACCCCAACTACGAGGACTGCCAGACGGTGGAGAAGAGAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CCA 72 bp ACGACTGGCCTCAAGTGCCTCGTGTGTATGACGGCGTaGAGGCTGCTTGCTCCGAGTCCGGAGCAACTGAGA +
Preference number: 6 (lower is better)
Translates to: TTGLKCLVCMTA*RLLAPSPEQLR
Trigger: TCTCAGTTGCTCCGGACTCGGAGCAAGCAGCCTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS CAA 72 bp CAGGCACAGGTCCCCCACGTGCTTCCGCATGCGGCCTaGGCACCGCTTCTTGTAATGTCTGCTGTCTGTGTC +
Preference number: 6 (lower is better)
Translates to: QAQVPHVLPHAA*APLLVMSAVCV
Trigger: GACACAGACAGCAGACATTACAAGAAGCGGTGCCAAGGCCGCATGCGGAAGCACGTGGGGGACCTGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CAA 72 bp TCGCCTGCTTTGTTGCTCTCGGGTGGGTTCACAGGTTaGCCCTCCACTCGGGGCCGAACGACCTGCCGAAAA +
Preference number: 6 (lower is better)
Translates to: SPALLLSGGFTG*PSTRGRTTCRK
Trigger: TTTTCGGCAGGTCGTTCGGCCCCGAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CAA 90 bp TCCTTGGCCGAGAAGCAGTCTGTGATGGTGATGAGGCCCACGACTTaGCGGTGGGTCTGGAAGTCACCCCACTCGTTGTTCTCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SLAEKQSVMVMRPTT*RWVWKSPHSLFSGG
Trigger: CCCACCCGAGAACAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCATCACCATCACAGACTGCTTCTCGGCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 90 bp CACACGTGCACACTGGGCAGGCAGAACCAAGAGGGTGGCAGCTCCTaGCTGGTGCTGTCCTCGTGGAACCGGATGTGGAGGAAGAAGTCT +
Preference number: 6 (lower is better)
Translates to: HTCTLGRQNQEGGSS*LVLSSWNRMWRKKS
Trigger: AGACTTCTTCCTCCACATCCGGTTCCACGAGGACAGCACCAGCAAGGAGCTGCCACCCTCTTGGTTCTGCCTGCCCAGTGTGCACGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000519482.1
ENST00000520857.5
ENST00000521667.5
ENST00000521700.5
ENST00000522504.5
ENST00000648948.2
CDS GCA 72 bp CCAGGGTCTTCACGTGGCTGTAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAGGTTTGCCCTCCACTC +
Preference number: 6 (lower is better)
Translates to: PGSSRGCSRLLC*SRVGSQVCPPL
Trigger: GAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CCA 72 bp GTGGGTCTGGAAGTCACCCCACTCGTTGTTCTCGGGTaGGTAGTGGTGCCTGTAGCGGATGTAGAGGACTCG +
Preference number: 6 (lower is better)
Translates to: VGLEVTPLVVLG*VVVPVADVEDS
Trigger: CGAGTCCTCTACATCCGCTACAGGCACCACTACCCACCCGAGAACAACGAGTGGGGTGACTTCCAGACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS GCA 72 bp GACAGCTTCCAGGGTCTTCACGTGGCTGTAGTCGCCTaGTTTGTTGCTCTCGGGTGGGTTCACAGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: DSFQGLHVAVVA*FVALGWVHRFA
Trigger: GGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGACCCTGGAAGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000517667.5
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS GCA 72 bp AAGAAGAGATGGGTGGGGACTACGACTGGCCTCAAGTaGCTCGTGTGTATGACGGCGTGGAGGCTGCTTGCT +
Preference number: 6 (lower is better)
Translates to: KKRWVGTTTGLK*LVCMTAWRLLA
Trigger: AGCAAGCAGCCTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGTAGTCCCCACCCATCTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS CCA 72 bp CAGTCTGTGATGGTGATGAGGCCCACGACTTTGCGGTaGGTCTGGAAGTCACCCCACTCGTTGTTCTCGGGT +
Preference number: 6 (lower is better)
Translates to: QSVMVMRPTTLR*VWKSPHSLFSG
Trigger: ACCCGAGAACAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCATCACCATCACAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CCA 72 bp TGTCTATTGGCTGCTTCAGCAGGAAGGGTGCTGCCCTaGAACCTCCGAGCTCCACTCTTCCCACCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: CLLAASAGRVLP*NLRAPLFPPVP
Trigger: TGGAACTGGTGGGAAGAGTGGAGCTCGGAGGTTCCAGGGCAGCACCCTTCCTGCTGAAGCAGCCAATAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521944.1
ENST00000648948.2
CDS CCA 72 bp CCACAGTGCTGGTCAGGGAGATGTGGAGGAGATAAATaGGGTGATGGGTGCACGCCCGACACAGTAGGAACC +
Preference number: 6 (lower is better)
Translates to: PQCWSGRCGGDK*GDGCTPDTVGT
Trigger: GGTTCCTACTGTGTCGGGCGTGCACCCATCACCCCATTTATCTCCTCCACATCTCCCTGACCAGCACTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519482.1
CDS CAA 72 bp AGGTTCAATAGTTTCACATGCCTGACGATGGGAAGCTaGGTGAAGGGCACCGGTGGCAGGGTGAGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RFNSFTCLTMGS*VKGTGGRVRPP
Trigger: TGGCGGCCTCACCCTGCCACCGGTGCCCTTCACCAAGCTTCCCATCGTCAGGCATGTGAAACTATTGAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CAA 72 bp CGTCCGATCTCAGTACTGGTGTCAGGGTTGATGCCATaGGTGGTGAGGGCACCTGGCCGGTGTCTATTGGCT +
Preference number: 6 (lower is better)
Translates to: RPISVLVSGLMP*VVRAPGRCLLA
Trigger: AGCCAATAGACACCGGCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520857.5
ENST00000521944.1
CDS CAA 90 bp TGGCATGAGGTCTTCCAGCAGGAAACGGGCAAGGGGCATTCACCTTaGCTGACACCTTCCAGGGCCAGAAGCTATGTCTGCACCTTGCAG +
Preference number: 6 (lower is better)
Translates to: WHEVFQQETGKGHSP*LTPSRARSYVCTLQ
Trigger: CTGCAAGGTGCAGACATAGCTTCTGGCCCTGGAAGGTGTCAGCAAAGGTGAATGCCCCTTGCCCGTTTCCTGCTGGAAGACCTCATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS GCA 72 bp ATGATGGTCCAAGGGGAAGGCATCAAAGGCCTCGAGTaGAGGATACAGAGGCGTTGGGACTCTGTCCACAGG +
Preference number: 6 (lower is better)
Translates to: MMVQGEGIKGLE*RIQRRWDSVHR
Trigger: CCTGTGGACAGAGTCCCAACGCCTCTGTATCCTGCACTCGAGGCCTTTGATGCCTTCCCCTTGGACCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS CCA 72 bp CAGGGAGGGCGATGGGCTCCATGGTCCCAGGACACTTaGACGTATAGTTCTCTAGGCTTTGGGCCACATCTT +
Preference number: 6 (lower is better)
Translates to: QGGRWAPWSQDT*TYSSLGFGPHL
Trigger: AAGATGTGGCCCAAAGCCTAGAGAACTATACGTCCAAGTGTCCTGGGACCATGGAGCCCATCGCCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CCA 72 bp TGCAGATCTGGGCAGAGAGGTGCTGATCTGCAGTCTTaGCAACGCGGGAATGACTTCCACTGTGGAGCCACT +
Preference number: 6 (lower is better)
Translates to: CRSGQRGADLQS*QRGNDFHCGAT
Trigger: AGTGGCTCCACAGTGGAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCAGATCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CCA 72 bp GCAGGTTCCGTCACACCAGCTGCACAGATTAGTACATaGCCCTCAGGTCACACAGTCTCCCCTTCTGGATGC +
Preference number: 6 (lower is better)
Translates to: AGSVTPAAQIST*PSGHTVSPSGC
Trigger: GCATCCAGAAGGGGAGACTGTGTGACCTGAGGGCCATGTACTAATCTGTGCAGCTGGTGTGACGGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS CAA 72 bp GAGAAGCAGTCTGTGATGGTGATGAGGCCCACGACTTaGCGGTGGGTCTGGAAGTCACCCCACTCGTTGTTC +
Preference number: 6 (lower is better)
Translates to: EKQSVMVMRPTT*RWVWKSPHSLF
Trigger: GAACAACGAGTGGGGTGACTTCCAGACCCACCGCAAAGTCGTGGGCCTCATCACCATCACAGACTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 72 bp GTCTTCCAGCAGGAAACGGGCAAGGGGCATTCACCTTaGCTGACACCTTCCAGGGCCAGAAGCTATGTCTGC +
Preference number: 6 (lower is better)
Translates to: VFQQETGKGHSP*LTPSRARSYVC
Trigger: GCAGACATAGCTTCTGGCCCTGGAAGGTGTCAGCAAAGGTGAATGCCCCTTGCCCGTTTCCTGCTGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS CAA 72 bp TTCTTAGCACGTCCGATCTCAGTACTGGTGTCAGGGTaGATGCCATTGGTGGTGAGGGCACCTGGCCGGTGT +
Preference number: 6 (lower is better)
Translates to: FLARPISVLVSG*MPLVVRAPGRC
Trigger: ACACCGGCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACGTGCTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520857.5
ENST00000521944.1
CDS CAA 90 bp CTAAGGCAGTTCTTAGCACGTCCGATCTCAGTACTGGTGTCAGGGTaGATGCCATTGGTGGTGAGGGCACCTGGCCGGTGTCTATTGGCT +
Preference number: 6 (lower is better)
Translates to: LRQFLARPISVLVSG*MPLVVRAPGRCLLA
Trigger: AGCCAATAGACACCGGCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACGTGCTAAGAACTGCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520857.5
ENST00000521944.1
CDS TCA 72 bp CGGGGGTCGCAAGGCAGCAATGAGACAGAGAACCGATaGAATGATGGTCCAAGGGGAAGGCATCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: RGSQGSNETENR*NDGPRGRHQRP
Trigger: AGGCCTTTGATGCCTTCCCCTTGGACCATCATTTCATCGGTTCTCTGTCTCATTGCTGCCTTGCGACCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS GCA 72 bp AGAAAAGCTTCACGTGGCTGTAGTCGCCTGCTTTGTTaGTCTCGGGTGGGTTCACAGGTTTGCCCTCCACTC +
Preference number: 6 (lower is better)
Translates to: RKASRGCSRLLC*SRVGSQVCPPL
Trigger: GAGTGGAGGGCAAACCTGTGAACCCACCCGAGAGCAACAAAGCAGGCGACTACAGCCACGTGAAGCTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS CCA 72 bp GCAGCCCGAAGACAAAGAGCCGGGAGTCATACAGTGTaGAGCCGTAGATCTCCTTCTGCACGTGGAACTTCT +
Preference number: 6 (lower is better)
Translates to: AARRQRAGSHTV*SRRSPSARGTS
Trigger: AGAAGTTCCACGTGCAGAAGGAGATCTACGGCTCCACACTGTATGACTCCCGGCTCTTTGTCTTCGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 90 bp ATCTCCTTCTGCACGTGGAACTTCTCAAAGGTCTGTGGCCAGTCCTaGGCCGAGAAGCAGTCTGTGATGGTGATGAGGCCCACGACTTTG +
Preference number: 6 (lower is better)
Translates to: ISFCTWNFSKVCGQS*AEKQSVMVMRPTTL
Trigger: CAAAGTCGTGGGCCTCATCACCATCACAGACTGCTTCTCGGCCAAGGACTGGCCACAGACCTTTGAGAAGTTCCACGTGCAGAAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 72 bp AGCGGATGTAGAGGACTCGCTGGGAGTCCCGCACGCTaGTCTGACTCACAGAGCAAATCCTCTTATAGATCC +
Preference number: 6 (lower is better)
Translates to: SGCRGLAGSPAR*SDSQSKSSYRS
Trigger: GGATCTATAAGAGGATTTGCTCTGTGAGTCAGATCAGCGTGCGGGACTCCCAGCGAGTCCTCTACATCCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 72 bp CCTCAGCACACTGCATGTAGTCAGGGACGCTCATTTTaGAGTCCCAGTCCTTCAGGGCGCGCAGCTCAAATT +
Preference number: 6 (lower is better)
Translates to: PQHTACSQGRSF*SPSPSGRAAQI
Trigger: AATTTGAGCTGCGCGCCCTGAAGGACTGGGACTTCAAAATGAGCGTCCCTGACTACATGCAGTGTGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648948.2
CDS CCA 72 bp AAACATATCCAAGAAGAGATGGGTGGGGACTACGACTaGCCTCAAGTGCCTCGTGTGTATGACGGCGTGGAG +
Preference number: 6 (lower is better)
Translates to: KHIQEEMGGDYD*PQVPRVYDGVE
Trigger: CTCCACGCCGTCATACACACGAGGCACTTGAGGCCAGTCGTAGTCCCCACCCATCTCTTCTTGGATATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521167.1
CDS CAA 72 bp CGTCCGATCTCAGTACTGGTGTCAGGGTTGATGCCATaGGTGGTGAGGGCACCTGGATCAATGAGAACTTCC +
Preference number: 6 (lower is better)
Translates to: RPISVLVSGLMP*VVRAPGSMRTS
Trigger: GGAAGTTCTCATTGATCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 72 bp TCTGTCCAGACGCTTGGACTCCAGCACGATGAACAGTaGCTCGATGAAGTCCTCGATTCTCTTCTCCACCGT +
Preference number: 6 (lower is better)
Translates to: SVQTLGLQHDEQ*LDEVLDSLLHR
Trigger: ACGGTGGAGAAGAGAATCGAGGACTTCATCGAGTCACTGTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS TCA 72 bp TCATGCTCGGTGGAGTTGAAGACATCCAGGAGCAGGTaGCACTGCCGGGTACTTGCCCTGGAATATTCTTTC +
Preference number: 6 (lower is better)
Translates to: SCSVELKTSRSR*HCRVLALEYSF
Trigger: GAAAGAATATTCCAGGGCAAGTACCCGGCAGTGTCACCTGCTCCTGGATGTCTTCAACTCCACCGAGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524162.5
CDS GCA 72 bp AATGAATGTGCAGATCTGGGCAGAGAGGTGCTGATCTaGAGTCTTGGCAACGCGGGAATGACTTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: NECADLGREVLI*SLGNAGMTSTV
Trigger: CACAGTGGAAGTCATTCCCGCGTTGCCAAGACTGCAGATCAGCACCTCTCTGCCCAGATCTGCACATTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CAA 72 bp TTATCCCCAGACTTGTCTGTGGCTCTGTCCAGACGCTaGGACTCCAGCACGATGAACAGTGACTCGATGAAG +
Preference number: 6 (lower is better)
Translates to: LSPDLSVALSRR*DSSTMNSDSMK
Trigger: CTTCATCGAGTCACTGTTCATCGTGCTGGAGTCCAAGCGTCTGGACAGAGCCACAGACAAGTCTGGGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CAA 72 bp TTCTTAGCACGTCCGATCTCAGTACTGGTGTCAGGGTaGATGCCATTGGTGGTGAGGGCACCTGGATCAATG +
Preference number: 6 (lower is better)
Translates to: FLARPISVLVSG*MPLVVRAPGSM
Trigger: CATTGATCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACGTGCTAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 90 bp CTAAGGCAGTTCTTAGCACGTCCGATCTCAGTACTGGTGTCAGGGTaGATGCCATTGGTGGTGAGGGCACCTGGATCAATGAGAACTTCC +
Preference number: 6 (lower is better)
Translates to: LRQFLARPISVLVSG*MPLVVRAPGSMRTS
Trigger: GGAAGTTCTCATTGATCCAGGTGCCCTCACCACCAATGGCATCAACCCTGACACCAGTACTGAGATCGGACGTGCTAAGAACTGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438773.4
ENST00000648948.2
CDS CAA 90 bp TGCAGGAGATTCTCCTGGCAGGAGAAATCCAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACCTTCCCAGGCTGCAAAGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: CRRFSWQEKSSFTLM*IVNVATFPGCKGNW
Trigger: CCAGTTCCCTTTGCAGCCTGGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000634178.1
ENST00000648948.2
CDS CAA 90 bp AGATCCTGCAGGAGATTCTCCTGGCAGGAGAAATCCAGCTTCACTTaGATGTTGATTGTGAACGTGGCCACCTTCCCAGGCTGCAAAGGG +
Preference number: 6 (lower is better)
Translates to: RSCRRFSWQEKSSFT*MLIVNVATFPGCKG
Trigger: CCCTTTGCAGCCTGGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCAGGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000634178.1
ENST00000648948.2
CDS TCA 72 bp ACCAGTTCCACCAGGATAGTGATAGATGACAGAAGCTaGACACAATCCTTCCAGGGCAGCTCCAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: TSSTRIVIDDRS*TQSFQGSSKPQ
Trigger: CTGTGGCTTGGAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTATCACTATCCTGGTGGAACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 72 bp CACTCTTCCCACCAGTTCCACCAGGATAGTGATAGATaGCAGAAGCTGAACACAATCCTTCCAGGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: HSSHQFHQDSDR*QKLNTILPGQL
Trigger: GAGCTGCCCTGGAAGGATTGTGTTCAGCTTCTGTCATCTATCACTATCCTGGTGGAACTGGTGGGAAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CAA 72 bp AGGAGATTCTCCTGGCAGGAGAAATCCAGCTTCACTTaGATGTTGATTGTGAACGTGGCCACCTTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRFSWQEKSSFT*MLIVNVATFPG
Trigger: GCCTGGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000634178.1
ENST00000648948.2
CDS TCA 72 bp TGCTCCGTTTCTGAATTGCAAGGACACGTACAGCCTTaGTGCACGCTTCCAACTCAATCACTCCCGCATTCT +
Preference number: 6 (lower is better)
Translates to: CSVSELQGHVQP*CTLPTQSLPHS
Trigger: AGAATGCGGGAGTGATTGAGTTGGAAGCGTGCATCAAGGCTGTACGTGTCCTTGCAATTCAGAAACGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS TCA 72 bp TCAGTTCAATTCAGTGCACATGTCTGCCTCCTACACTaGGCCGTGAGCTCTCAGGACAGGGTTCATGCATTA +
Preference number: 6 (lower is better)
Translates to: SVQFSAHVCLLH*AVSSQDRVHAL
Trigger: TAATGCATGAACCCTGTCCTGAGAGCTCACGGCTCAGTGTAGGAGGCAGACATGTGCACTGAATTGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518839.1
ENST00000520532.5
CDS TCA 72 bp GGGTACTTGCCCTGGAATATTCTTTCTGAGGATTTCTaGGAGGTAAAGCAGCCACTGATGGCAGCGTCCAGA +
Preference number: 6 (lower is better)
Translates to: GYLPWNILSEDF*EVKQPLMAASR
Trigger: TCTGGACGCTGCCATCAGTGGCTGCTTTACCTCTCAGAAATCCTCAGAAAGAATATTCCAGGGCAAGTACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524162.5
CDS GCA 72 bp GATGGAAGCCGATCAGCTCATAGAGCTCGGAGAGGATaGTGTAGCGCTGAATTTTCTCTTCCTCAGAAAGCT +
Preference number: 6 (lower is better)
Translates to: DGSRSAHRARRG*CSAEFSLPQKA
Trigger: AGCTTTCTGAGGAAGAGAAAATTCAGCGCTACAGCATCCTCTCCGAGCTCTATGAGCTGATCGGCTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000648948.2
CDS CCA 72 bp AGACAGATGTCTGGGGCATATTCAGCTTACGGGTGTTaGAAAACTTTCAGTGTCCAAAGGAGACCCAGCACC +
Preference number: 6 (lower is better)
Translates to: RQMSGAYSAYGC*KTFSVQRRPST
Trigger: GGTGCTGGGTCTCCTTTGGACACTGAAAGTTTTCCAACACCCGTAAGCTGAATATGCCCCAGACATCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517667.5
CDS CAA 72 bp TTCTCCTGGCAGGAGAAATCCAGCTTCACTTTGATGTaGATTGTGAACGTGGCCACCTTCCCAGGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: FSWQEKSSFTLM*IVNVATFPGCK
Trigger: TTTGCAGCCTGGGAAGGTGGCCACGTTCACAATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000634178.1
ENST00000648948.2
CDS CAA 72 bp AGGCATCAAAGGCCTCGAGTGCAGGATACAGAGGCGTaGGGACTCTGTCCACAGGTAAAATTCAGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: RHQRPRVQDTEA*GLCPQVKFRKA
Trigger: AGCTTTTCTGAATTTTACCTGTGGACAGAGTCCCAACGCCTCTGTATCCTGCACTCGAGGCCTTTGATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518839.1
CDS TCA 72 bp TTTTTATTCCCGGCAGGTTATCCAGCAAACAGTCACTaGACACACCGAAGACCGTGGTATGGTAACCGTTCA +
Preference number: 6 (lower is better)
Translates to: FLFPAGYPANSH*THRRPWYGNRS
Trigger: TGAACGGTTACCATACCACGGTCTTCGGTGTGTTCAGTGACTGTTTGCTGGATAACCTGCCGGGAATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CCA 72 bp CGCTTACCATCACTGAGATCCTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTCACTTTGATGTTGATT +
Preference number: 6 (lower is better)
Translates to: RLPSLRSCRRFS*QEKSSFTLMLI
Trigger: AATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGGTAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634178.1
CDS CAA 90 bp CTGGCAATTTACATTCTCAGTGAGGCAGCAGGCTCTATGATCTTCTaGAGATGGGTGATTCAAAGCTGCTTTTTCCACCAGCTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: LAIYILSEAAGSMIF*RWVIQSCFFHQLSL
Trigger: CAGAGAAAGCTGGTGGAAAAAGCAGCTTTGAATCACCCATCTCAAGAAGATCATAGAGCCTGCTGCCTCACTGAGAATGTAAATTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521667.5
CDS TCA 72 bp TCTGAGGTAAGGAAAATGCTTCTGCTCACCCATAGGTaGCCAAAAAGGCCGATGATTCTTCGAACTCATCCT +
Preference number: 6 (lower is better)
Translates to: SEVRKMLLLTHR*PKRPMILRTHP
Trigger: AGGATGAGTTCGAAGAATCATCGGCCTTTTTGGTCACCTATGGGTGAGCAGAAGCATTTTCCTTACCTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518723.1
CDS TCA 72 bp CATGTCTTCAAAGCAAGCCTGGGAACCAAATCAAATTaGAGCGTGCTTAACAAGCAAAGGATGTTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: HVFKASLGTKSN*SVLNKQRMLSG
Trigger: CCCTGACAACATCCTTTGCTTGTTAAGCACGCTTCAATTTGATTTGGTTCCCAGGCTTGCTTTGAAGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523777.5
CDS CCA 72 bp CAGCCCCATGTTTTCAACTCGAAGTTCAAACGGCATTaGGTTATATACCATCAGCTGAACTTCACACACATC +
Preference number: 6 (lower is better)
Translates to: QPHVFNSKFKRH*VIYHQLNFTHI
Trigger: GATGTGTGTGAAGTTCAGCTGATGGTATATAACCCAATGCCGTTTGAACTTCGAGTTGAAAACATGGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000521667.5
ENST00000648948.2
CDS CCA 72 bp ATTCCATCATCACTGAGATCCTGCAGGAGATTCTCCTaGCAGGAGAAATCCAGCTTCACTTTGATGTTGATT +
Preference number: 6 (lower is better)
Translates to: IPSSLRSCRRFS*QEKSSFTLMLI
Trigger: AATCAACATCAAAGTGAAGCTGGATTTCTCCTGCCAGGAGAATCTCCTGCAGGATCTCAGTGATGATGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000438773.4
ENST00000518839.1
ENST00000520532.5
ENST00000520857.5
ENST00000521667.5
ENST00000648948.2
CDS CAA 72 bp GCAGCCCCATGTTTTCAACTCGAAGTTCAAACGGCATaGGGTTATATACCATCAGCTGAACTTCACACACAT +
Preference number: 6 (lower is better)
Translates to: AAPCFQLEVQTA*GYIPSAELHTH
Trigger: ATGTGTGTGAAGTTCAGCTGATGGTATATAACCCAATGCCGTTTGAACTTCGAGTTGAAAACATGGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000521667.5
ENST00000648948.2
CDS TCA 72 bp GTTTCCAATTATTCCTCTGGCAATTTACATTCTCAGTaGGGCAGCAGGCTCTATGATCTTCTTGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: VSNYSSGNLHSQ*GSRLYDLLEMG
Trigger: ACCCATCTCAAGAAGATCATAGAGCCTGCTGCCTCACTGAGAATGTAAATTGCCAGAGGAATAATTGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521667.5
CDS CAA 72 bp GTTATATACCATCAGCTGAACTTCACACACATCTCCTaGAACCCACTGGAAATCTATTTTCTTGTTCCGCTC +
Preference number: 6 (lower is better)
Translates to: VIYHQLNFTHIS*NPLEIYFLVPL
Trigger: GAGCGGAACAAGAAAATAGATTTCCAGTGGGTTCAAGGAGATGTGTGTGAAGTTCAGCTGATGGTATATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438773.4
ENST00000520857.5
ENST00000521167.1
ENST00000648948.2