Pregenerated sensors for TRAPPC6B (Homo sapiens)
Ensembl gene IDs: ENSG00000182400Ensembl transcript IDs: ENST00000330149.10, ENST00000347691.9, ENST00000469361.5, ENST00000554018.1, ENST00000555269.5, ENST00000556765.1, ENST00000557764.5
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGTCAATCTTCTTAATCTGCCATTTCTATGGCAGAGTACCCAGTaGAACATCTTGTTTGGTGTGTCAGTCACCCCCTGCTGCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: IVNLLNLPFLWQSTQ*NILFGVSVTPCCRV Trigger: AACTCTGCAGCAGGGGGTGACTGACACACCAAACAAGATGTTTCACTGGGTACTCTGCCATAGAAATGGCAGATTAAGAAGATTGACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR TCA 90 bp | GGCTGTTGCAGATTAGCTTCAAACATCCATATCACATATCTTCACTaGGAAGCAGAAGAGGGATGCTGGCAAATCCCTAACTTGTATCAA | + |
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Preference number: 1 (lower is better) Translates to: GCCRLASNIHITYLH*EAEEGCWQIPNLYQ Trigger: TTGATACAAGTTAGGGATTTGCCAGCATCCCTCTTCTGCTTCTCAGTGAAGATATGTGATATGGATGTTTGAAGCTAATCTGCAACAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR TCA 90 bp | GAAGCCTTGCATTTCAGTATGTTCTACAGCTTCTGTATCATCACCTaGAATTTGCAAGCAGGCATTGAAGACACTTCAGCTGTTACAATA | + |
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Preference number: 1 (lower is better) Translates to: EALHFSMFYSFCIIT*NLQAGIEDTSAVTI Trigger: TATTGTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGAAATGCAAGGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR GCA 90 bp | TGCATTTCAGTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTaGAAGCAGGCATTGAAGACACTTCAGCTGTTACAATACTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: CISVCSTASVSSPEI*KQALKTLQLLQYFL Trigger: TAAAAAGTATTGTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGAAATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATATATCAGATGAGCACTaGCCCCAAACCACTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNISDEH*PQTTKM Trigger: CATCTTAGTGGTTTGGGGTCAGTGCTCATCTGATAT...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATTCAATTATCCAACTCTaGTCAGCTGGAAGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNSIIQL*SAGRGK Trigger: CTTTCCTCTTCCAGCTGAGCAGAGTTGGATAATTGA...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGTGTCAGTCACCCCCTaGTGCAGAGTTCCCTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSVSVTP*CRVPCH Trigger: GTGACAGGGAACTCTGCAGCAGGGGGTGACTGACAC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTCTGCATCTTGGTGTCTaGTTATTTGAAATCCGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KMLDPLPGLPCTGREVESLHLGV*LFEIRF Trigger: AAACCGGATTTCAAATAACCAGACACCAAGATGCAG...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGTGAAACATCTTGTTTaGTGTGTCAGTCACCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSVKHLV*CVSHPL Trigger: CAGGGGGTGACTGACACACCAAACAAGATGTTTCAC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGAAGGGAGAACGAAATaGCTGATGGGTAGGCATATG | + |
|
Preference number: 2 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSEGRTK*LMGRHM Trigger: CATATGCCTACCCATCAGCCATTTCGTTCTCCCTTC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCGAAATTTGTTGTCCTGAAGTACATAGATGCCCTGATGATTTGTCCTTATATCTAACTCATCCTTaGACCTTGCAGTATCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: AGEICCPEVHRCPDDLSLYLTHP*TLQYLL Trigger: CAAAAGATACTGCAAGGTTCAAGGATGAGTTAGATA...TAAGGACAAATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTGCAAGCAGGCATTGCCTGAAGTACATAGATaGCCTGATGATTTGTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SVCSTASVSSPEICKQALPEVHR*PDDLSL Trigger: TAAGGACAAATCATCAGGGCATCTATGTACTTCAGG...CAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAACTGCATCTTGGTGTCTaGTTATTTGAAATCCGGTTT | + |
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Preference number: 2 (lower is better) Translates to: VKCMSWQNVPSSPLICVKLHLGV*LFEIRF Trigger: AAACCGGATTTCAAATAACCAGACACCAAGATGCAG...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR CAA 90 bp | TGTTCTACAGCTTCTGTATCATCACCTGAAATTTGCAAGCAGGCATaGAAGACACTTCAGCTGTTACAATACTTTTTATTCCCAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: CSTASVSSPEICKQA*KTLQLLQYFLFPSL Trigger: CAAACTTGGGAATAAAAAGTATTGTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR CAA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATaGATAAAAATACATGCTTACTCCTGTACAAACATCGAACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: MSWQNVPSSPLICVK*IKIHAYSCTNIEQC Trigger: ACATTGTTCGATGTTTGTACAGGAGTAAGCATGTATTTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| 3UTR CAA 90 bp | GTTTTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATAAAAATACATGCTTACTCCTGTACA | + |
|
Preference number: 2 (lower is better) Translates to: VLVKCMSWQNVPSSP*ICVKLIKIHAYSCT Trigger: TGTACAGGAGTAAGCATGTATTTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTTACACAAACCTAGATaGTATGATCTACTATACACC | + |
|
Preference number: 2 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSLHKPR*YDLLYT Trigger: GGTGTATAGTAGATCATACCATCTAGGTTTGTGTAA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR CCA 72 bp | ATTTCTATGGCAGAGTACCCAGTGAAACATCTTGTTTaGTGTGTCAGTCACCCCCTGCTGCAGAGTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: ISMAEYPVKHLV*CVSHPLLQSSL Trigger: CAGGGAACTCTGCAGCAGGGGGTGACTGACACACCAAACAAGATGTTTCACTGGGTACTCTGCCATAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR TCA 72 bp | CTTCTTAATCTGCCATTTCTATGGCAGAGTACCCAGTaGAACATCTTGTTTGGTGTGTCAGTCACCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LLNLPFLWQSTQ*NILFGVSVTPC Trigger: GCAGGGGGTGACTGACACACCAAACAAGATGTTTCACTGGGTACTCTGCCATAGAAATGGCAGATTAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR CCA 72 bp | AACCTAGATGGTATGATCTACTATACACCTAAGCTATaGCCTATTGCTCCTAGGCTACAAACCTGTACAGCA | + |
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Preference number: 3 (lower is better) Translates to: NLDGMIYYTPKL*PIAPRLQTCTA Trigger: TGCTGTACAGGTTTGTAGCCTAGGAGCAATAGGCCATAGCTTAGGTGTATAGTAGATCATACCATCTAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR GCA 72 bp | GGAATAAAGATGTTAGATCCTTTACCAGGACTTCCATaGACGGGGAGAGAAGTTGAAAGTCAAAACTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GIKMLDPLPGLP*TGREVESQNCN Trigger: GTTACAGTTTTGACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTTTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTAGTGAAACATCTTGTTaGGTGTGTCAGTCACCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSSETSC*VCQSPP Trigger: AGGGGGTGACTGACACACCAAACAAGATGTTTCACT...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGATTGCAGTCATGCATaGCTTAGCAAAGGGGATACA | + |
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Preference number: 3 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSDCSHA*LSKGDT Trigger: TGTATCCCCTTTGCTAAGCAATGCATGACTGCAATC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGCCATCAGAAGGCTGTaGCAGATTAGCTTCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSAIRRL*QISFKH Trigger: ATGTTTGAAGCTAATCTGCAACAGCCTTCTGATGGC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAATTTGCAAGCAGGCATaGAAGACACTTCAGCTGTTA | + |
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Preference number: 3 (lower is better) Translates to: VKCMSWQNVPSSPLICVKICKQA*KTLQLL Trigger: TAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAAT...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR TCA 72 bp | GACTTCCTTTGTCTCGTTAGCCTAGATTCCATCAAATaGTCAAGTAAGCCAATTACCATGATTGGCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: DFLCLVSLDSIK*SSKPITMIGTE Trigger: TTCTGTGCCAATCATGGTAATTGGCTTACTTGATCATTTGATGGAATCTAGGCTAACGAGACAAAGGAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| 3UTR TCA 72 bp | CATTTCAGTATGTTCTACAGCTTCTGTATCATCACCTaGAATTTGCAAGCAGGCATTGAAGACACTTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: HFSMFYSFCIIT*NLQAGIEDTSA Trigger: AGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR GCA 72 bp | GTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTaGAAGCAGGCATTGAAGACACTTCAGCTGTTACAA | + |
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Preference number: 3 (lower is better) Translates to: VCSTASVSSPEI*KQALKTLQLLQ Trigger: TTGTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR CAA 90 bp | TCTGTATCATCACCTGAAATTTGCAAGCAGGCATTGAAGACACTTCAGCTGTTAGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATA | + |
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Preference number: 3 (lower is better) Translates to: SVSSPEICKQALKTLQLLVPSSP*ICVKLI Trigger: TATCAATTTAACACAGATCAAAGGAGATGAAGGGAC...TAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATA | + |
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Preference number: 3 (lower is better) Translates to: VKCMSWQNVPSSPLICVKVPSSP*ICVKLI Trigger: TATCAATTTAACACAGATCAAAGGAGATGAAGGGAC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| 3UTR-3UTR CAA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAAGATGCCCTGATGATTaGTCCTTAGATTGTCGATTT | + |
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Preference number: 3 (lower is better) Translates to: MSWQNVPSSPLICVKLIKRCPDD*SLDCRF Trigger: AAATCGACAATCTAAGGACAAATCATCAGGGCATCT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555269.5 |
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| 3UTR-3UTR CAA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATA | + |
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Preference number: 3 (lower is better) Translates to: MSWQNVPSSPLICVKLIKVPSSP*ICVKLI Trigger: TATCAATTTAACACAGATCAAAGGAGATGAAGGGAC...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| CDS-3UTR CCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATCCGTTTGAGCTGGTCTaGGGGTTCCAGCTCGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNPFELV*GFQLAP Trigger: AGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGG...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATGTTTTGGCTCCCGTTTaGGCTGGTCTGGGGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNVLAPV*AGLGVP Trigger: TGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAAC...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTCCAAAGCCAACCAGCTaGGATGCGATCCGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESPKPTS*DAIRPL Trigger: CAGCGGCCGGATCGCATCTCAGCTGGTTGGCTTTGG...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347691.9 |
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| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGCCAACCAGCTGAGATaGGATCCGGCCGCTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSANQLR*DPAAGR Trigger: CCGCCCAGCGGCCGGATCGCATCTCAGCTGGTTGGC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000347691.9 |
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| CDS-3UTR CCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTGGCTCCCGTTTGAGCTaGTCTGGGGGTTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVGSRLS*SGGSSS Trigger: CGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCC...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| CDS-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATTGGCAGAGTACCCAGTaGAACATCTTGTTTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNWQSTQ*NILFGV Trigger: CACACCAAACAAGATGTTTCACTGGGTACTCTGCCA...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR CCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATGCCATTCTATCCCTGTaGCTAAGAGACCGAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNAILSL*LRDRGI Trigger: AATACCTCGGTCTCTTAGCCACAGGGATAGAATGGC...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTCCGTTTGAGCTGGTCTaGGGGTTCCAGCTCGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSPFELV*GFQLAP Trigger: AGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGG...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGGCTCCCGTTTGAGCTaGTCTGGGGGTTCCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSGSRLS*SGGSSS Trigger: CGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTAGGCTGGTACTGAAATaGGTCTGGTACTGGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESRLVLK*VWYWRE Trigger: CTCTCTCCAGTACCAGACTCATTTCAGTACCAGCCT...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGTTTTGGCTCCCGTTTaGGCTGGTCTGGGGGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKVLAPV*AGLGVP Trigger: TGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAAC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| CDS-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATTTTGCAAGCAGGCATTaGAGACACTTCAGCTGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNFASRH*RHFSCY Trigger: GTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAA...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATGAAAGATATATCAGATaGGCACTGACCCCAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNERYIR*ALTPNH Trigger: GTGGTTTGGGGTCAGTGCTCATCTGATATATCTTTC...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR TCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATATCACATATCTTCACTaGGAAGCAGAAGAGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNITYLH*EAEEGC Trigger: GCATCCCTCTTCTGCTTCTCAGTGAAGATATGTGAT...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTTTTCCACCTCCCCCTaGTCCGCGGACTTGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVFSTSP*SADLYT Trigger: AGTGTACAAGTCCGCGGAGCAGGGGGAGGTGGAAAA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTCAGTCACCCCCTGCTaGAGAGTTCCCTGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVSVTPC*RVPCHT Trigger: TGTGTGACAGGGAACTCTGCAGCAGGGGGTGACTGA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGTGTCAGTCACCCCCTaGTGCAGAGTTCCCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKVSVTP*CRVPCH Trigger: GTGACAGGGAACTCTGCAGCAGGGGGTGACTGACAC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAGGCTCCCGTTTGAGCTaGTCTGGGGGTTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKGSRLS*SGGSSS Trigger: CGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCC...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTTTCCACCTCCCCCTaGTCCGCGGACTTGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKFSTSP*SADLYT Trigger: AGTGTACAAGTCCGCGGAGCAGGGGGAGGTGGAAAA...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTGAAGCAGAAGAGGGATaGTGGCAAATCCCTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESEAEEG*WQIPNL Trigger: CAAGTTAGGGATTTGCCAGCATCCCTCTTCTGCTTC...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTGCAAGCAGGCATTGCCAAGCTTCGAGTTTTaGCTCCCGTTTGAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVCSTASVSSPEICKQALPSFEF*LPFELV Trigger: GACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGG...CAATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR CCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTGTGAAACATCTTGTTTaGTGTGTCAGTCACCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESVKHLV*CVSHPL Trigger: CAGGGGGTGACTGACACACCAAACAAGATGTTTCAC...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATTATACACCTAAGCTATaGCCTATTGCTCCTAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNYTPKL*PIAPRL Trigger: TAGCCTAGGAGCAATAGGCCATAGCTTAGGTGTATA...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTGAAGGGAGAACGAAATaGCTGATGGGTAGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESEGRTK*LMGRHM Trigger: CATATGCCTACCCATCAGCCATTTCGTTCTCCCTTC...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTTTTGCAAGCAGGCATTaGAGACACTTCAGCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESFASRH*RHFSCY Trigger: GTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAA...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTCAGTCACCCCCTGCTaGAGAGTTCCCTGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSSVTPC*RVPCHT Trigger: TGTGTGACAGGGAACTCTGCAGCAGGGGGTGACTGA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAGTGTCAGTCACCCCCTaGTGCAGAGTTCCCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKVSVTP*CRVPCH Trigger: GTGACAGGGAACTCTGCAGCAGGGGGTGACTGACAC...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATCTGCATCTTGGTGTCTaGTTATTTGAAATCCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNLHLGV*LFEIRF Trigger: AAACCGGATTTCAAATAACCAGACACCAAGATGCAG...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTGGCAGAGTACCCAGTaGAACATCTTGTTTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVWQSTQ*NILFGV Trigger: CACACCAAACAAGATGTTTCACTGGGTACTCTGCCA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATTTTCCACCTCCCCCTaGTCCGCGGACTTGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKFSTSP*SADLYT Trigger: AGTGTACAAGTCCGCGGAGCAGGGGGAGGTGGAAAA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATACACTGTTGAAGCCTTaGATTTCAGTATGTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNTLLKP*ISVCST Trigger: TGTAGAACATACTGAAATGCAAGGCTTCAACAGTGT...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTCCAAGCTTCGAGTTTTaGCTCCCGTTTGAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSPSFEF*LPFELV Trigger: GACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGG...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTATATCAGATGAGCACTaGCCCCAAACCACTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVISDEH*PQTTKM Trigger: CATCTTAGTGGTTTGGGGTCAGTGCTCATCTGATAT...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTGAAAGATATATCAGATaGGCACTGACCCCAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVERYIR*ALTPNH Trigger: GTGGTTTGGGGTCAGTGCTCATCTGATATATCTTTC...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAGGTCTGTCACTGACTaGAACATCATTATAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVRSVTD*NIIIGH Trigger: GTGCCCTATAATGATGTTTCAGTCAGTGACAGACCT...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTTTTCCCCAAAACATGTaGGAATTAGGATTGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESFPQNM*ELGLQS Trigger: TGACTGCAATCCTAATTCTCACATGTTTTGGGGAAA...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTACCAGGACTTCCATaGACGGGGAGAGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKLPGLP*TGREVE Trigger: TTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAA...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTGCAAGCAGGCATGCCATTCTATCCCTGTaGCTAAGAGACCGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FQYVLQLLYHHLKFASRHAILSL*LRDRGI Trigger: AATACCTCGGTCTCTTAGCCACAGGGATAGAATGGC...ATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAACCAAGCTTCGAGTTTTaGCTCCCGTTTGAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKPSFEF*LPFELV Trigger: GACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGG...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTGACACCATCTCGTTATaGAGAAGCAAAAACAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVDTISL*RSKNNA Trigger: GGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTC...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGAAGGGAGAACGAAATaGCTGATGGGTAGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKEGRTK*LMGRHM Trigger: CATATGCCTACCCATCAGCCATTTCGTTCTCCCTTC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAAGGCTGGTACTGAAATaGGTCTGGTACTGGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKRLVLK*VWYWRE Trigger: CTCTCTCCAGTACCAGACTCATTTCAGTACCAGCCT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTCTAGATTCCATCAAATaGTCAAGTAAGCCAATTACC | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESLDSIK*SSKPIT Trigger: GGTAATTGGCTTACTTGATCATTTGATGGAATCTAG...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | CTGAGTAAGCAGGCGAAATTTGTTGTCCTGAAGTACATAGATGCCCTGATGATTTCATCACCTGAAATTTaGAAGCAGGCATTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LSKQAKFVVLKYIDALMISSPEI*KQALKT Trigger: TGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGA...AATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTTACCAGGACTTCCATaGACGGGGAGAGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSLPGLP*TGREVE Trigger: TTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTCAATTATCCAACTCTaGTCAGCTGGAAGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVSIIQL*SAGRGK Trigger: CTTTCCTCTTCCAGCTGAGCAGAGTTGGATAATTGA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGAAGCAGAAGAGGGATaGTGGCAAATCCCTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSEAEEG*WQIPNL Trigger: CAAGTTAGGGATTTGCCAGCATCCCTCTTCTGCTTC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGCCATTCTATCCCTGTaGCTAAGAGACCGAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSAILSL*LRDRGI Trigger: AATACCTCGGTCTCTTAGCCACAGGGATAGAATGGC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGACACCATCTCGTTATaGAGAAGCAAAAACAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKDTISL*RSKNNA Trigger: GGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGCAGAAGAGGGATGCTaGCAAATCCCTAACTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKAEEGC*QIPNLY Trigger: ATACAAGTTAGGGATTTGCCAGCATCCCTCTTCTGC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTATGAGGTCTGTCACTaGCTGAAACATCATTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVYEVCH*LKHHYR Trigger: CCTATAATGATGTTTCAGTCAGTGACAGACCTCATA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTCTGCATCTTGGTGTCTaGTTATTTGAAATCCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVLHLGV*LFEIRF Trigger: AAACCGGATTTCAAATAACCAGACACCAAGATGCAG...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTTTACACAAACCTAGATaGTATGATCTACTATACACC | + |
|
Preference number: 4 (lower is better) Translates to: KMLDPLPGLPCTGREVESLHKPR*YDLLYT Trigger: GGTGTATAGTAGATCATACCATCTAGGTTTGTGTAA...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGCAGAAGAGGGATGCTaGCAAATCCCTAACTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSAEEGC*QIPNLY Trigger: ATACAAGTTAGGGATTTGCCAGCATCCCTCTTCTGC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATTTCCTGCAGACATCTaGGTAAGCAGGCGAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKFPADI*VSRRNL Trigger: CAAATTTCGCCTGCTTACTCAGATGTCTGCAGGAAA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000555269.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATTTGCAAGCAGGCATTaGAGACACTTCAGCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKFASRH*RHFSCY Trigger: GTAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAATATCAGATGAGCACTaGCCCCAAACCACTAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKISDEH*PQTTKM Trigger: CATCTTAGTGGTTTGGGGTCAGTGCTCATCTGATAT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAAGGTCTGTCACTGACTaGAACATCATTATAGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKRSVTD*NIIIGH Trigger: GTGCCCTATAATGATGTTTCAGTCAGTGACAGACCT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATATGAGGTCTGTCACTaGCTGAAACATCATTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKYEVCH*LKHHYR Trigger: CCTATAATGATGTTTCAGTCAGTGACAGACCTCATA...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTCTAGATTCCATCAAATaGTCAAGTAAGCCAATTACC | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVLDSIK*SSKPIT Trigger: GGTAATTGGCTTACTTGATCATTTGATGGAATCTAG...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAACCTGAAGTACATAGATaGCCTGATGATTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKPEVHR*PDDLSL Trigger: TAAGGACAAATCATCAGGGCATCTATGTACTTCAGG...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTATGTTCTACAGCTTCTGTATCATCACCTGAAATTTGCAAGCAGGCATCCTGAAGTACATAGATaGCCTGATGATTTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQYVLQLLYHHLKFASRHPEVHR*PDDLSL Trigger: TAAGGACAAATCATCAGGGCATCTATGTACTTCAGG...ATGCCTGCTTGCAAATTTCAGGTGATGATACAGAAGCTGTAGAACATACTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATATCTAACTCATCCTTaGACCTTGCAGTATCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKYLTHP*TLQYLL Trigger: CAAAAGATACTGCAAGGTTCAAGGATGAGTTAGATA...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTACTGTACCCTTCCATaGAAGGAAAATGGTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSYCTLP*KENGML Trigger: AAGCATACCATTTTCCTTTCATGGAAGGGTACAGTA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTTTCCCCAAAACATGTaGGAATTAGGATTGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSFPQNM*ELGLQS Trigger: TGACTGCAATCCTAATTCTCACATGTTTTGGGGAAA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTTCATCACCTGAAATTTaGAAGCAGGCATTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSSSPEI*KQALKT Trigger: TGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGA...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAACACTGTTGAAGCCTTaGATTTCAGTATGTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VKCMSWQNVPSSPLICVKTLLKP*ISVCST Trigger: TGTAGAACATACTGAAATGCAAGGCTTCAACAGTGT...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTCAATCTTCTTAATCTaGCATTTCTATGGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVSIFLI*HFYGRV Trigger: TACTCTGCCATAGAAATGGCAGATTAAGAAGATTGA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATATACACCTAAGCTATaGCCTATTGCTCCTAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKYTPKL*PIAPRL Trigger: TAGCCTAGGAGCAATAGGCCATAGCTTAGGTGTATA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTTTACACAAACCTAGATaGTATGATCTACTATACACC | + |
|
Preference number: 4 (lower is better) Translates to: LVKCMSWQNVPSSPLICVLHKPR*YDLLYT Trigger: GGTGTATAGTAGATCATACCATCTAGGTTTGTGTAA...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| 3UTR CAA 72 bp | GAAGAGGGATGCTGGCAAATCCCTAACTTGTATCAATaGTTAAGAGCAACAGAAAATTTCTTATTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EEGCWQIPNLYQ*LRATENFLFKA Trigger: GGCTTTGAATAAGAAATTTTCTGTTGCTCTTAACAATTGATACAAGTTAGGGATTTGCCAGCATCCCTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR TCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATACTGTACCCTTCCATaGAAGGAAAATGGTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKYCTLP*KENGML Trigger: AAGCATACCATTTTCCTTTCATGGAAGGGTACAGTA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATCATCACCTGAAATTTaGAAGCAGGCATTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKSSPEI*KQALKT Trigger: TGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTACACTGTTGAAGCCTTaGATTTCAGTATGTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSTLLKP*ISVCST Trigger: TGTAGAACATACTGAAATGCAAGGCTTCAACAGTGT...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATTTTCAAATCCAACCTaGTCACCTTTCTATCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKFSNPT*SPFYQS Trigger: GGATTGATAGAAAGGTGAGCAGGTTGGATTTGAAAA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR GCA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAATCAATCTTCTTAATCTaGCATTTCTATGGCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSWQNVPSSPLICVKLIKSIFLI*HFYGRV Trigger: TACTCTGCCATAGAAATGGCAGATTAAGAAGATTGA...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS CCA 90 bp | CTAATTCTTCCAAGCTTCGAGTTTTGGCTCCCGTTTGAGCTGGTCTaGGGGTTCCAGCTCGCGCCTCAGCGACTTCGCCGGCGCCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LILPSFEFWLPFELV*GFQLAPQRLRRRRG Trigger: GCCGCGGCGCCGGCGAAGTCGCTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAATTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
||
| CDS TCA 90 bp | CTTCCGGTCCCCTCTACCCCGGCATTCGGCCAGCTCTATGATCACTaGGTTCCTCTCTCCCAAGCCCGGAGAGGCCAGCGCCCAGATATG | + |
|
Preference number: 5 (lower is better) Translates to: LPVPSTPAFGQLYDH*VPLSQARRGQRPDM Trigger: CATATCTGGGCGCTGGCCTCTCCGGGCTTGGGAGAGAGGAACTCAGTGATCATAGAGCTGGCCGAATGCCGGGGTAGAGGGGACCGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469361.5 |
||
| CDS TCA 90 bp | CCATTTCCTGCTAATTCTTCCAAGCTTCGAGTTTTGGCTCCCGTTTaGGCTGGTCTGGGGGTTCCAGCTCGCGCCTCAGCGACTTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PFPANSSKLRVLAPV*AGLGVPARASATSP Trigger: CGGCGAAGTCGCTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAATTAGCAGGAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
||
| CDS CCA 90 bp | CGCCTCATCCGCCATTTCCTGCTAATTCTTCCAAGCTTCGAGTTTTaGCTCCCGTTTGAGCTGGTCTGGGGGTTCCAGCTCGCGCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLIRHFLLILPSFEF*LPFELVWGFQLAPQ Trigger: CTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAATTAGCAGGAAATGGCGGATGAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATCCCTGCTCCGCGGACTaGTACACTCCAGACACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNPCSAD*YTPDTI Trigger: GATGGTGTCTGGAGTGTACAAGTCCGCGGAGCAGGG...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTAGTTTTGGCTCCCGTTaGAGCTGGTCTGGGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KMLDPLPGLPCTGREVESSFGSR*SWSGGS Trigger: GGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACT...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAACCCTGCTCCGCGGACTaGTACACTCCAGACACCATC | + |
|
Preference number: 5 (lower is better) Translates to: VKCMSWQNVPSSPLICVKPCSAD*YTPDTI Trigger: GATGGTGTCTGGAGTGTACAAGTCCGCGGAGCAGGG...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
||
| CDS-3UTR CAA 90 bp | ATTCCCAAGTTTGATAAGCCACCTCTGATTAAGCCACACGTAAATGCTAAATACAGTTTTGGCTCCCGTTaGAGCTGGTCTGGGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPKFDKPPLIKPHVNAKYSFGSR*SWSGGS Trigger: GGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACT...GTATTTAGCATTTACGTGTGGCTTAATCAGAGGTGGCTTATCAAACTTGGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATGATTGCAGTCATGCATaGCTTAGCAAAGGGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNDCSHA*LSKGDT Trigger: TGTATCCCCTTTGCTAAGCAATGCATGACTGCAATC...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATGCCATCAGAAGGCTGTaGCAGATTAGCTTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNAIRRL*QISFKH Trigger: ATGTTTGAAGCTAATCTGCAACAGCCTTCTGATGGC...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATCTTTCATCTCCATACTaGTCCTTTCATGGCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNLSSPY*SFHGHQ Trigger: CTGATGGCCATGAAAGGACAAGTATGGAGATGAAAG...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTAGTTTTGGCTCCCGTTaGAGCTGGTCTGGGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSSFGSR*SWSGGS Trigger: GGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACT...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATATTTGCAAGCAGGCATaGAAGACACTTCAGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNICKQA*KTLQLL Trigger: TAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAAT...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTGATTGCAGTCATGCATaGCTTAGCAAAGGGGATACA | + |
|
Preference number: 5 (lower is better) Translates to: KMLDPLPGLPCTGREVESDCSHA*LSKGDT Trigger: TGTATCCCCTTTGCTAAGCAATGCATGACTGCAATC...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AGTCACCCCCTGCTGCAGAGTTCCCTGTCACACAAATACATGCAAAAGGGTAATAACCTAACTCTCCCTTaGTTTCTACTAAGAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHPLLQSSLSHKYMQKGNNLTLP*FLLREV Trigger: AACCTCTCTTAGTAGAAACAAAGGGAGAGTTAGGTT...ATTACCCTTTTGCATGTATTTGTGTGACAGGGAACTCTGCAGCAGGGGGTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | AAGATGTTAGATCCTTTACCAGGACTTCCATGCACGGGGAGAGAAGTTGAAAGTAGATGCCCTGATGATTaGTCCTTAGATTGTCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: KMLDPLPGLPCTGREVESRCPDD*SLDCRF Trigger: AAATCGACAATCTAAGGACAAATCATCAGGGCATCT...ACTTTCAACTTCTCTCCCCGTGCATGGAAGTCCTGGTAAAGGATCTAACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330149.10 |
||
| CDS-3UTR CAA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTCTTTCATCTCCATACTaGTCCTTTCATGGCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVKCMSWQNVPSSPLICVLSSPY*SFHGHQ Trigger: CTGATGGCCATGAAAGGACAAGTATGGAGATGAAAG...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGCACGGGGAGAGAAGTaGAAAGTCAAAACTGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: VKCMSWQNVPSSPLICVKARGEK*KVKTVT Trigger: TGTTACAGTTTTGACTTTCAACTTCTCTCCCCGTGC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAGCCATCAGAAGGCTGTaGCAGATTAGCTTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VKCMSWQNVPSSPLICVKAIRRL*QISFKH Trigger: ATGTTTGAAGCTAATCTGCAACAGCCTTCTGATGGC...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | TCTGTATCATCACCTGAAATTTGCAAGCAGGCATTGAAGACACTTCAGCTGTTAAGATGCCCTGATGATTaGTCCTTAGATTGTCGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSPEICKQALKTLQLLRCPDD*SLDCRF Trigger: AAATCGACAATCTAAGGACAAATCATCAGGGCATCT...TAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAATTTCAGGTGATGATACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR CAA 90 bp | CTGAGTAAGCAGGCGAAATTTGTTGTCCTGAAGTACATAGATGCCCTGATGATTGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LSKQAKFVVLKYIDALMIVPSSP*ICVKLI Trigger: TATCAATTTAACACAGATCAAAGGAGATGAAGGGAC...AATCATCAGGGCATCTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555269.5 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAAGTGAAACATCTTGTTaGGTGTGTCAGTCACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MSWQNVPSSPLICVKLIKSETSC*VCQSPP Trigger: AGGGGGTGACTGACACACCAAACAAGATGTTTCACT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAACAAACCAACTTATTaGAACCCAGCTTTTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LVKCMSWQNVPSSPLICVNKPTY*NPAFSH Trigger: GTGTGAAAAAGCTGGGTTCAAATAAGTTGGTTTGTT...AACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
||
| CDS-3UTR CAA 90 bp | ATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAATTGATAAAAATTTGCAAGCAGGCATaGAAGACACTTCAGCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: MSWQNVPSSPLICVKLIKICKQA*KTLQLL Trigger: TAACAGCTGAAGTGTCTTCAATGCCTGCTTGCAAAT...TTTTATCAATTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000555269.5 |
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| CDS-3UTR CAA 90 bp | GTTAAGTGTATGTCATGGCAGAATGTCCCTTCATCTCCTTTGATCTGTGTTAAAAACAAACCAACTTATTaGAACCCAGCTTTTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: VKCMSWQNVPSSPLICVKNKPTY*NPAFSH Trigger: GTGTGAAAAAGCTGGGTTCAAATAAGTTGGTTTGTT...TTTAACACAGATCAAAGGAGATGAAGGGACATTCTGCCATGACATACACTTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS-3UTR CAA 90 bp | TTGGTTAATTCAGAAGCACAATTCAGGTGCTTTCTATCTACATCCCACTATTCTGTCCCTTCATCTCCTTaGATCTGTGTTAAATTGATA | + |
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Preference number: 5 (lower is better) Translates to: LVNSEAQFRCFLSTSHYSVPSSP*ICVKLI Trigger: TATCAATTTAACACAGATCAAAGGAGATGAAGGGAC...AGAATAGTGGGATGTAGATAGAAAGCACCTGAATTGTGCTTCTGAATTAACCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000330149.10 ENST00000347691.9 |
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| CDS TCA 72 bp | CTCTCTCCCAAGCCCGGAGAGGCCAGCGCCCAGATATaGGGAAGGTTCCCCTCTCACCACGATGTCGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSPKPGEASAQI*GRFPSHHDVGG Trigger: GCCCCCGACATCGTGGTGAGAGGGGAACCTTCCTCATATCTGGGCGCTGGCCTCTCCGGGCTTGGGAGAGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469361.5 |
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| CDS TCA 72 bp | CCCTCTACCCCGGCATTCGGCCAGCTCTATGATCACTaGGTTCCTCTCTCCCAAGCCCGGAGAGGCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSTPAFGQLYDH*VPLSQARRGQR Trigger: GCGCTGGCCTCTCCGGGCTTGGGAGAGAGGAACTCAGTGATCATAGAGCTGGCCGAATGCCGGGGTAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469361.5 |
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| CDS CCA 72 bp | CCAAGCTTCGAGTTTTGGCTCCCGTTTGAGCTGGTCTaGGGGTTCCAGCTCGCGCCTCAGCGACTTCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: PSFEFWLPFELV*GFQLAPQRLRR Trigger: CCGGCGAAGTCGCTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS CCA 72 bp | GCGCCGCGGCTCCGTCAGGCCGCCATTCTATCCCTGTaGCTAAGAGACCGAGGTATTCACACGACTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: APRLRQAAILSL*LRDRGIHTTSQ Trigger: TTGGGAAGTCGTGTGAATACCTCGGTCTCTTAGCCACAGGGATAGAATGGCGGCCTGACGGAGCCGCGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS TCA 72 bp | GCTAATTCTTCCAAGCTTCGAGTTTTGGCTCCCGTTTaGGCTGGTCTGGGGGTTCCAGCTCGCGCCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: ANSSKLRVLAPV*AGLGVPARASA Trigger: CGCTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAATTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS CCA 72 bp | TTCTTCCAAGCTTCGAGTTTTGGCTCCCGTTTGAGCTaGTCTGGGGGTTCCAGCTCGCGCCTCAGCGACTTC | + |
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Preference number: 6 (lower is better) Translates to: FFQASSFGSRLS*SGGSSSRLSDF Trigger: GAAGTCGCTGAGGCGCGAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS CAA 72 bp | CATCGTCCGTTTTCCACCTCCCCCTGCTCCGCGGACTaGTACACTCCAGACACCATCTCGTTATGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: HRPFSTSPCSAD*YTPDTISLWRS Trigger: GCTTCTCCATAACGAGATGGTGTCTGGAGTGTACAAGTCCGCGGAGCAGGGGGAGGTGGAAAACGGACGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000555269.5 ENST00000556765.1 |
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| CDS CCA 72 bp | CGCCATTTCCTGCTAATTCTTCCAAGCTTCGAGTTTTaGCTCCCGTTTGAGCTGGTCTGGGGGTTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RHFLLILPSFEF*LPFELVWGFQL Trigger: GAGCTGGAACCCCCAGACCAGCTCAAACGGGAGCCAAAACTCGAAGCTTGGAAGAATTAGCAGGAAATGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS CAA 72 bp | ATACATCGTCCGTTTTCCTCCCCCTGCTCCGCGGACTaGTACACTCCAGACACCATCTCGTTATGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: IHRPFSSPCSAD*YTPDTISLWRS Trigger: GCTTCTCCATAACGAGATGGTGTCTGGAGTGTACAAGTCCGCGGAGCAGGGGGAGGAAAACGGACGATGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000554018.1 |
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| CDS GCA 72 bp | CCCAGGTTAGAGTGCAATAGCATAATCTCGGCTCATTaGAACGTCTACCTCCCTCCCAGGCTCAAGCTATCC | + |
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Preference number: 6 (lower is better) Translates to: PRLECNSIISAH*NVYLPPRLKLS Trigger: GGATAGCTTGAGCCTGGGAGGGAGGTAGACGTTGCAATGAGCCGAGATTATGCTATTGCACTCTAACCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469361.5 |
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| CDS CCA 72 bp | TCCGCGGACTTGTACACTCCAGACACCATCTCGTTATaGAGAAGCAAAAACAACGCCTCATCCGCCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: SADLYTPDTISL*RSKNNASSAIS Trigger: GGAAATGGCGGATGAGGCGTTGTTTTTGCTTCTCCATAACGAGATGGTGTCTGGAGTGTACAAGTCCGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000330149.10 ENST00000347691.9 ENST00000469361.5 ENST00000554018.1 ENST00000555269.5 ENST00000556765.1 ENST00000557764.5 |
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| CDS GCA 72 bp | TATAACCTACCTGCAAGAAAATTTTCAAATCCAACCTaGTCACCTTTCTATCAATCCTTGTCCCACTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: YNLPARKFSNPT*SPFYQSLSHSK Trigger: TTTCGAGTGGGACAAGGATTGATAGAAAGGTGAGCAGGTTGGATTTGAAAATTTTCTTGCAGGTAGGTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469361.5 |
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