Pregenerated sensors for TRAPPC6A (Homo sapiens)
Ensembl gene IDs: ENSG00000007255Ensembl transcript IDs: ENST00000006275.8, ENST00000585934.1, ENST00000587818.1, ENST00000588062.5, ENST00000592647.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGCCAAAGACCACCCCGAAATaGAGCGGCCCCACCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QDHPEMQRPHRLLRPVRPKTTPK*SGPTVS Trigger: GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTT...TGGCCTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGAAGACCACCCCGAAATaGAGCGGCCCCACCGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: FIEQLLGSDAAEAGIPPQKTTPK*SGPTVS Trigger: GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTT...CTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACTTATTGAGCAGCTACTaGGCAGTGACGCTGCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSYWAVTLPRRESHHSPDLLSSY*AVTLPR Trigger: CCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| 3UTR-3UTR TCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACCTTCCTGAGCAAATGTaGCCCCTAGGGCCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: PLLSSYWAVTLPRRESHHLPEQM*PLGPGI Trigger: AATCCCAGGCCCTAGGGGTCACATTTGCTCAGGAAG...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| 3UTR-3UTR GCA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTT | + |
|
Preference number: 2 (lower is better) Translates to: LLSSYWAVTLPRRESHHSVRLSR*EAGLGF Trigger: AAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCAC...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588062.5 |
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| 3UTR GCA 72 bp | CCGGTGAGGCCAGGGGCAGCAGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTTCGGAATCACCACCTG | + |
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Preference number: 3 (lower is better) Translates to: PVRPGAAVRLSR*EAGLGFRNHHL Trigger: CAGGTGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCCCCTGGCCTCACCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| 3UTR-3UTR CAA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACGCAGCTGGGACCCCTTaGCCTCCTCTGACACCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLLSSYWAVTLPRRESHHAAGTP*PPLTPP Trigger: TGGGGGTGTCAGAGGAGGCAAAGGGGTCCCAGCTGC...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| 3UTR CCA 72 bp | CAGATTCCACACACACAGCCTTTATTGAGCAGCTACTaGGCAGTGACGCTGCCGAGGCGGGAATCCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: QIPHTQPLLSSY*AVTLPRRESHH Trigger: GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGGCTGTGTGTGTGGAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000006275.8 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | AGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGCCAGGCTGCCACGGAGGCGGTaGCCACGCTCTCAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNAAAPPSPEAGEARLPRRR*PRSQCP Trigger: TGGGCATTGAGAGCGTGGTCACCGCCTCCGTGGCAG...CCTGGCCTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGCCACTGCCACGGAGGCGGTaGCCACGCTCTCAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDHPEMQRPHRLLRPVRPLPRRR*PRSQCP Trigger: TGGGCATTGAGAGCGTGGTCACCGCCTCCGTGGCAG...TGGCCTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | AGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGCCAGGATCCCACCACAGTCCTaGCCGCAGCTGGGACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPPRNAAAPPSPEAGEARIPPQS*PQLGPL Trigger: AAGGGGTCCCAGCTGCGGTCAGGACTGTGGTGGGAT...CCTGGCCTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCAGGAGGCCGCAGGTaGAGGCCAGGAACTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLGFPRPPRNAAAPPSPEAGGRR*RPGTWV Trigger: CACCCAAGTTCCTGGCCTTCACCTGCGGCCTCCTGC...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCGCAGGAGGCCGCAGGTaGAGGCCAGGAACTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGPGIPKTTPKCSGPTVSAGGRR*RPGTWV Trigger: CACCCAAGTTCCTGGCCTTCACCTGCGGCCTCCTGC...GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTAGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCGCAGCTACTGGGCAGTaGCGCTGCCGAGGCGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PRAWDSQDHPEMQRPHRLAATGQ*RCRGGN Trigger: ATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGC...GAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCTAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCACCTCCCGGGGCAGCCTTaGTGGCCCCCGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAVRLSRCEAGLGFRNHHLPGQP*WPPLPP Trigger: GGGAGGAAGCGGGGGCCACCAAGGCTGCCCCGGGAG...GTGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592647.1 |
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| CDS-3UTR TCA 90 bp | GCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGATCCCACCACAGTCCTaGCCGCAGCTGGGACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWDSQDHPEMQRPHRLLRIPPQS*PQLGPL Trigger: AAGGGGTCCCAGCTGCGGTCAGGACTGTGGTGGGAT...CCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | AGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGATCCCACCACAGTCCTaGCCGCAGCTGGGACCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAWDSQDHPEMQRPHRLLIPPQS*PQLGPL Trigger: AAGGGGTCCCAGCTGCGGTCAGGACTGTGGTGGGAT...CAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGAAGACCACCCCGAAATaGAGCGGCCCCACCGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AWDSQDHPEMQRPHRLLRKTTPK*SGPTVS Trigger: GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTT...CCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGCGCAGGCTGTCCATCTaGTTCTGGAACACCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLGFPRPPRNAAAPPSPERRLSI*FWNTAT Trigger: GGTGGCGGTGTTCCAGAAGCAGATGGACAGCCTGCG...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | AGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGCGCAGGCTGTCCATCTaGTTCTGGAACACCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RAWDSQDHPEMQRPHRLLRRLSI*FWNTAT Trigger: GGTGGCGGTGTTCCAGAAGCAGATGGACAGCCTGCG...CAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCTTCCTCCAGATACTaGAGGCCAGAGGCCATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGFPRPPRNAAAPPSPEASSRY*RPEAIG Trigger: CCCGATGGCCTCTGGCCTGCAGTATCTGGAGGAAGC...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGTCATCTTCTGTCCCTTaGTGGCCCCCGCTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPRPPRNAAAPPSPEAGESSSVP*WPPLPP Trigger: GGGAGGAAGCGGGGGCCACCAAGGGACAGAAGATGA...CTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000006275.8 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGAGTCCTGACCGCAGCTaGGACCCCTTTGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGFPRPPRNAAAPPSPESPDRS*DPFASS Trigger: AGAGGAGGCAAAGGGGTCCCAGCTGCGGTCAGGACT...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGAGTCCTGACCGCAGCTaGGACCCCTTTGCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: FPRPPRNAAAPPSPEAGESPDRS*DPFASS Trigger: AGAGGAGGCAAAGGGGTCCCAGCTGCGGTCAGGACT...CTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | AGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGTCCTGACCGCAGCTaGGACCCCTTTGCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RAWDSQDHPEMQRPHRLLSPDRS*DPFASS Trigger: AGAGGAGGCAAAGGGGTCCCAGCTGCGGTCAGGACT...CAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACGCAGGAGGCCGCAGGTaGAGGCCAGGAACTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHAGGRR*RPGTWV Trigger: CACCCAAGTTCCTGGCCTTCACCTGCGGCCTCCTGC...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCAGCAGGAGGCCGCAGGTaGAGGCCAGGAACTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: GSSAAQQVRGRLRISESPAGGRR*RPGTWV Trigger: CACCCAAGTTCCTGGCCTTCACCTGCGGCCTCCTGC...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCACTGCCACGGAGGCGGTaGCCACGCTCTCAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSSAAQQVRGRLRISESPLPRRR*PRSQCP Trigger: TGGGCATTGAGAGCGTGGTCACCGCCTCCGTGGCAG...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR GCA 90 bp | TTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FPRPPRNAAAPPSPEAGEVRLSR*EAGLGF Trigger: AAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCAC...CTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | CAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGAGGCCATTATTGAGCAGCTACTaGGCAGTGACGCTGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QDHPEMQRPHRLLRPVRPLLSSY*AVTLPR Trigger: CCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA...TGGCCTCACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTCTGACACCCCCACCTCAATTTGATACCCACTTCCTGAGCAAATGTGACCCCCCGGGGTCGGGGTCGTaGGCCCACAGCTCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PLTPPPQFDTHFLSKCDPPGSGS*AHSSAT Trigger: GGTGGCTGAGCTGTGGGCTCACGACCCCGACCCCGG...GGGGTCACATTTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGTGTCAGAGG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTGCAGCTACTGGGCAGTaGCGCTGCCGAGGCGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLSSYWAVTLPRRESHHSAATGQ*RCRGGN Trigger: ATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGC...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGGCCAGGAACTTGGGTaGTTCCTCCAGATACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GFPRPPRNAAAPPSPEAGGQELG*FLQILQ Trigger: CTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCC...ACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | CCTAGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCGGCCAGGAACTTGGGTaGTTCCTCCAGATACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRAWDSQDHPEMQRPHRLGQELG*FLQILQ Trigger: CTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCC...GAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | CAGCCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACAAGACCACCCCGAAATaGAGCGGCCCCACCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPLLSSYWAVTLPRRESHKTTPK*SGPTVS Trigger: GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTT...GTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACTCTTCTGTCCCTTGGTaGCCCCCGCTTCCTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHSSVPW*PPLPPH Trigger: GTGGGGAGGAAGCGGGGGCCACCAAGGGACAGAAGA...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000006275.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACCTGTCCATCTGCTTCTaGAACACCGCCACCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SSYWAVTLPRRESHHSPDLSICF*NTATHR Trigger: CCTGTGGGTGGCGGTGTTCCAGAAGCAGATGGACAG...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGTTATTGAGCAGCTACTaGGCAGTGACGCTGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: AWDSQDHPEMQRPHRLLRLLSSY*AVTLPR Trigger: CCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA...CCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACCTTCCTGAGCAAATGTaGCCCCTAGGGCCTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: SSYWAVTLPRRESHHSPDLPEQM*PLGPGI Trigger: AATCCCAGGCCCTAGGGGTCACATTTGCTCAGGAAG...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACCGCAGGCTGTCCATCTaGTTCTGGAACACCGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHRRLSI*FWNTAT Trigger: GGTGGCGGTGTTCCAGAAGCAGATGGACAGCCTGCG...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCACGCAGGCTGTCCATCTaGTTCTGGAACACCGCCACC | + |
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Preference number: 4 (lower is better) Translates to: GSSAAQQVRGRLRISESPRRLSI*FWNTAT Trigger: GGTGGCGGTGTTCCAGAAGCAGATGGACAGCCTGCG...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR GCA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTAAGACCACCCCGAAATaGAGCGGCCCCACCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LLSSYWAVTLPRRESHHSKTTPK*SGPTVS Trigger: GGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTT...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGTTCGGAATCACCACCTaGAACTTACAGACGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GLGFPRPPRNAAAPPSPEFGITT*NLQTGR Trigger: CCTGCCCGTCTGTAAGTTCCAGGTGGTGATTCCGAA...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTAGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCACCCCCACCTCAATTTaGTACCCACTTCCTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PRAWDSQDHPEMQRPHRLTPTSI*YPLPEQ Trigger: TTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGT...GAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | AGGGGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCAGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: RGSSAAQQVRGRLRISESVRLSR*EAGLGF Trigger: AAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCAC...TGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR GCA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCAGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: GSSAAQQVRGRLRISESPVRLSR*EAGLGF Trigger: AAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCAC...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR CCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACCTGTCCATCTGCTTCTaGAACACCGCCACCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHLSICF*NTATHR Trigger: CCTGTGGGTGGCGGTGTTCCAGAAGCAGATGGACAG...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACTTCGGAATCACCACCTaGAACTTACAGACGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSYWAVTLPRRESHHSPDFGITT*NLQTGR Trigger: CCTGCCCGTCTGTAAGTTCCAGGTGGTGATTCCGAA...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTAGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCGCCACCATCTCCGTGTaGAGAAACTCAAACAACACA | + |
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Preference number: 4 (lower is better) Translates to: PRAWDSQDHPEMQRPHRLATISV*RNSNNT Trigger: TGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGC...GAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | GGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGGCCGGTGCCACCATCTCCGTGTaGAGAAACTCAAACAACACA | + |
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Preference number: 4 (lower is better) Translates to: GFPRPPRNAAAPPSPEAGATISV*RNSNNT Trigger: TGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGC...ACCGGCCTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTCTGACACCCCCACCTCAATTTGATACCCACTTCCTGAGCAAATGTGACCCCCTGCCACGGAGGCGGTaGCCACGCTCTCAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLTPPPQFDTHFLSKCDPLPRRR*PRSQCP Trigger: TGGGCATTGAGAGCGTGGTCACCGCCTCCGTGGCAG...GGGGTCACATTTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGTGTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTCTGACACCCCCACCTCAATTTGATACCCACTTCCTGAGCAAATGTGACCCCGCAGCTACTGGGCAGTaGCGCTGCCGAGGCGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PLTPPPQFDTHFLSKCDPAATGQ*RCRGGN Trigger: ATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGC...GGGGTCACATTTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGTGTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | GCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCACGGCCAGGAACTTGGGTaGTTCCTCCAGATACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAVRLSRCEAGLGFRNHHGQELG*FLQILQ Trigger: CTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCC...GTGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR CCA 90 bp | GGGGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACTTCGGAATCACCACCTaGAACTTACAGACGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAVRLSRCEAGLGFRNHFGITT*NLQTGR Trigger: CCTGCCCGTCTGTAAGTTCCAGGTGGTGATTCCGAA...GTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR TCA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCTTCCTGAGCAAATGTaGCCCCTAGGGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSYWAVTLPRRESHHSLPEQM*PLGPGI Trigger: AATCCCAGGCCCTAGGGGTCACATTTGCTCAGGAAG...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | TTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGCTTCCTGAGCAAATGTaGCCCCTAGGGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FIEQLLGSDAAEAGIPPQLPEQM*PLGPGI Trigger: AATCCCAGGCCCTAGGGGTCACATTTGCTCAGGAAG...CTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR GCA 90 bp | TTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGGGCCAGGAACTTGGGTaGTTCCTCCAGATACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIEQLLGSDAAEAGIPPQGQELG*FLQILQ Trigger: CTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCC...CTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACTTCGGAATCACCACCTaGAACTTACAGACGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHFGITT*NLQTGR Trigger: CCTGCCCGTCTGTAAGTTCCAGGTGGTGATTCCGAA...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CAGCCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACACCCCCACCTCAATTTaGTACCCACTTCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPLLSSYWAVTLPRRESHTPTSI*YPLPEQ Trigger: TTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGT...GTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACACCCCCACCTCAATTTaGTACCCACTTCCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHTPTSI*YPLPEQ Trigger: TTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGT...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | CCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACGCCACCATCTCCGTGTaGAGAAACTCAAACAACACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLSSYWAVTLPRRESHHATISV*RNSNNT Trigger: TGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGC...GTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR TCA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCAGCCACCATCTCCGTGTaGAGAAACTCAAACAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GSSAAQQVRGRLRISESPATISV*RNSNNT Trigger: TGTGTTGTTTGAGTTTCTTCACACGGAGATGGTGGC...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR GCA 90 bp | CCTCTGACACCCCCACCTCAATTTGATACCCACTTCCTGAGCAAATGTGACCCCGTGCGGCTCAGCAGGTaGGAGGCAGGCTTAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLTPPPQFDTHFLSKCDPVRLSR*EAGLGF Trigger: AAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCAC...GGGGTCACATTTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGTGTCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CCA 90 bp | CCTCTGACACCCCCACCTCAATTTGATACCCACTTCCTGAGCAAATGTGACCCCCTGTCCATCTGCTTCTaGAACACCGCCACCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLTPPPQFDTHFLSKCDPLSICF*NTATHR Trigger: CCTGTGGGTGGCGGTGTTCCAGAAGCAGATGGACAG...GGGGTCACATTTGCTCAGGAAGTGGGTATCAAATTGAGGTGGGGGTGTCAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS CCA 90 bp | GCCGCCTGTGGGAAAGCTCTGGGCGGGTCCCGGCAGCCGCTGCTCTaGCGCCGGGGGATTCCCCTCCCACTCTCTTGGTCTTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AACGKALGGSRQPLL*RRGIPLPLSWSCPQ Trigger: CTGAGGGCAAGACCAAGAGAGTGGGAGGGGAATCCCCCGGCGCCAGAGCAGCGGCTGCCGGGACCCGCCCAGAGCTTTCCCACAGGCGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587818.1 |
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| CDS-3UTR CAA 90 bp | GGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCACCATCTCCCGGGGCAGCCTaGGTGGCCCCCGCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSAAQQVRGRLRISESPSPGAA*VAPASS Trigger: GGAGGAAGCGGGGGCCACCAAGGCTGCCCCGGGAGA...TGGTGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592647.1 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGCTCATCTTCTGTCCCTaGGTGGCCCCCGCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLGFPRPPRNAAAPPSPELIFCP*VAPASS Trigger: GGAGGAAGCGGGGGCCACCAAGGGACAGAAGATGAG...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000006275.8 |
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| CDS-3UTR CAA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACGCAGCTGGGACCCCTTaGCCTCCTCTGACACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSYWAVTLPRRESHHSPDAAGTP*PPLTPP Trigger: TGGGGGTGTCAGAGGAGGCAAAGGGGTCCCAGCTGC...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACGCAGCTGGGACCCCTTaGCCTCCTCTGACACCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPLLSSYWAVTLPRRESHAAGTP*PPLTPP Trigger: TGGGGGTGTCAGAGGAGGCAAAGGGGTCCCAGCTGC...GTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | AGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCCTGACGTGAAGGCCAGGAACTaGGGTGCTTCCTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SSYWAVTLPRRESHHSPDVKARN*GASSRY Trigger: GTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCAC...GTCAGGACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGAGCACACACAGCCTTTATaGAGCAGCTACTGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGFPRPPRNAAAPPSPEHTQPL*SSYWAV Trigger: CACTGCCCAGTAGCTGCTCAATAAAGGCTGTGTGTG...CTCAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | AGGGCCTGGGATTCCCAAGACCACCCCGAAATGCAGCGGCCCCACCGTCTCCTGCACACACAGCCTTTATaGAGCAGCTACTGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAWDSQDHPEMQRPHRLLHTQPL*SSYWAV Trigger: CACTGCCCAGTAGCTGCTCAATAAAGGCTGTGTGTG...CAGGAGACGGTGGGGCCGCTGCATTTCGGGGTGGTCTTGGGAATCCCAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTTTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACGTGAAGGCCAGGAACTaGGGTGCTTCCTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: QPLLSSYWAVTLPRRESHVKARN*GASSRY Trigger: GTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCAC...GTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAAAGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | AGGGGCAGCAGTGCGGCTCAGCAGGTGCGAGGCAGGCTTAGGATTTCGGAATCAGTGAAGGCCAGGAACTaGGGTGCTTCCTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSAAQQVRGRLRISESVKARN*GASSRY Trigger: GTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCAC...TGATTCCGAAATCCTAAGCCTGCCTCGCACCTGCTGAGCCGCACTGCTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588062.5 ENST00000592647.1 |
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| CDS-3UTR CAA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTGTGAAGGCCAGGAACTaGGGTGCTTCCTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSYWAVTLPRRESHHSVKARN*GASSRY Trigger: GTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCAC...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS-3UTR CAA 90 bp | TTATTGAGCAGCTACTGGGCAGTGACGCTGCCGAGGCGGGAATCCCACCACAGTCACACACAGCCTTTATaGAGCAGCTACTGGGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSYWAVTLPRRESHHSHTQPL*SSYWAV Trigger: CACTGCCCAGTAGCTGCTCAATAAAGGCTGTGTGTG...ACTGTGGTGGGATTCCCGCCTCGGCAGCGTCACTGCCCAGTAGCTGCTCAATAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000006275.8 ENST00000585934.1 ENST00000588062.5 |
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| CDS GCA 72 bp | CCTGTGGGAAAGCTCTGGGCGGGTCCCGGCAGCCGCTaGTCTGGCGCCGGGGGATTCCCCTCCCACTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PVGKLWAGPGSR*SGAGGFPSHSL Trigger: AAGAGAGTGGGAGGGGAATCCCCCGGCGCCAGAGCAGCGGCTGCCGGGACCCGCCCAGAGCTTTCCCACAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587818.1 |
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| CDS CCA 72 bp | GGGAAAGCTCTGGGCGGGTCCCGGCAGCCGCTGCTCTaGCGCCGGGGGATTCCCCTCCCACTCTCTTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GKALGGSRQPLL*RRGIPLPLSWS Trigger: AGACCAAGAGAGTGGGAGGGGAATCCCCCGGCGCCAGAGCAGCGGCTGCCGGGACCCGCCCAGAGCTTTCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587818.1 |
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| CDS TCA 72 bp | GAAGCTGGACGGGCAGGCCGGGGTGCTCCCACCTGGTaGTTGGTGCGCAGGCTGTCCATCTGCTTCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EAGRAGRGAPTW*LVRRLSICFWN Trigger: GTTCCAGAAGCAGATGGACAGCCTGCGCACCAATCACCAGGTGGGAGCACCCCGGCCTGCCCGTCCAGCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587818.1 |
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| CDS CCA 72 bp | CCTCCCACTCTCTTGGTCTTGCCCTCAGGAGGAAGCTaGACGGGCAGGCCGGGGTGCTCCCACCTGGTGATT | + |
|
Preference number: 6 (lower is better) Translates to: PPTLLVLPSGGS*TGRPGCSHLVI Trigger: AATCACCAGGTGGGAGCACCCCGGCCTGCCCGTCCAGCTTCCTCCTGAGGGCAAGACCAAGAGAGTGGGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587818.1 |
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