RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAPPC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196655

Ensembl transcript IDs: ENST00000359005.8, ENST00000434101.6, ENST00000447216.2, ENST00000524797.1, ENST00000525079.5, ENST00000525303.5, ENST00000527680.1, ENST00000528230.5, ENST00000531290.5, ENST00000533012.1, ENST00000533058.5, ENST00000533149.1, ENST00000533632.6, ENST00000625526.2, ENST00000625680.2, ENST00000626820.2, ENST00000626997.1, ENST00000627703.2, ENST00000628720.2, ENST00000629243.3, ENST00000629713.2, ENST00000630040.1, ENST00000630169.2, ENST00000630172.1, ENST00000630535.1, ENST00000631071.1

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCAACGAGAGTaGCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACT +
Preference number: 1 (lower is better)
Translates to: LVWPHCPVWSHSQRE*PSQLVWHLPRHCGT
Trigger: AGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR TCA 90 bp TTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTaGATGCCACTCCACTCTGCCCTTGGCAGCTCTGGATCCTGGTAT +
Preference number: 1 (lower is better)
Translates to: FLLWQGWVGRSAFRL*MPLHSALGSSGSWY
Trigger: ATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 90 bp GGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTaGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCAC +
Preference number: 1 (lower is better)
Translates to: GSCIWFLLVWPHCPV*SHSQRECPSQLVWH
Trigger: GTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 90 bp AGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCACTCTGCCCTTaGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCC +
Preference number: 1 (lower is better)
Translates to: RQVGFPTLNATPLCP*QLWILVLGAVFGFS
Trigger: GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 90 bp GCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATaGCCCCATTGCCCTGTTTGGAGTCATAGCCAACGAGAGTGCCCC +
Preference number: 1 (lower is better)
Translates to: ALDPGIGSCIWFLLV*PHCPVWSHSQRECP
Trigger: GGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 90 bp GGCTTTCCGACTCTGAATGCCACTCCACTCTGCCCTTGGCAGCTCTaGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGC +
Preference number: 1 (lower is better)
Translates to: GFPTLNATPLCPWQL*ILVLGAVFGFSSYG
Trigger: GCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR TCA 90 bp TGCAGGAACTCTCAGAATTTGGGGGTCCATAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCCAGCCTTCTCTGCCACCTCCAGAGC +
Preference number: 1 (lower is better)
Translates to: CRNSQNLGVHNRFSL*PRSKSSSLLCHLQS
Trigger: GCTCTGGAGGTGGCAGAGAAGGCTGGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR GCA 90 bp CCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTaGCCTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTT +
Preference number: 1 (lower is better)
Translates to: PGIGSCIWFLLVWPH*PVWSHSQRECPSQL
Trigger: AAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 90 bp ACTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTaGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGC +
Preference number: 1 (lower is better)
Translates to: TLPLAALDPGIGSCI*FLLVWPHCPVWSHS
Trigger: GCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR GCA 90 bp GGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCA +
Preference number: 1 (lower is better)
Translates to: GISTSHQGQHSPTFK*TNKAAGISTGVSTA
Trigger: TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR GCA 90 bp AGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTGGGGGTCCATAACAGGTTCAGCCTA +
Preference number: 1 (lower is better)
Translates to: RLLGFPLECQQQYSC*RNSQNLGVHNRFSL
Trigger: TAGGCTGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR TCA 90 bp GCTAAATCTCTTATCTGTAACAGAATGTACCCCCTGGAGTTAGGGTaGAGATCAAGTGAGATAAAGCAGGAATGCCTGGCTGTAAGTGCT +
Preference number: 1 (lower is better)
Translates to: AKSLICNRMYPLELG*RSSEIKQECLAVSA
Trigger: AGCACTTACAGCCAGGCATTCCTGCTTTATCTCACTTGATCTTCACCCTAACTCCAGGGGGTACATTCTGTTACAGATAAGAGATTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
3UTR CCA 90 bp AACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGT +
Preference number: 1 (lower is better)
Translates to: NIYGPSSSINKSVQS*KVRPWYIQKERAQC
Trigger: ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR TCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCATCTTCCCTTTCCCCCTaGCAGTGGGCGGCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPSSLSP*QWAAFW
Trigger: CCAGAAAGCCGCCCACTGTCAGGGGGAAAGGGAAGA...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR TCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTCTTCCCTTTCCCCCTaGCAGTGGGCGGCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGSSLSP*QWAAFW
Trigger: CCAGAAAGCCGCCCACTGTCAGGGGGAAAGGGAAGA...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCCCCTCCCAACTTGTGTaGCACCTCCCACGCCATTGT +
Preference number: 2 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLPSQLV*HLPRHC
Trigger: ACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGG...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCACCTCACCCCCACCTGTaGTTTGCATATAGACCAGTG +
Preference number: 2 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPPHPHL*FAYRPV
Trigger: CACTGGTCTATATGCAAAGCACAGGTGGGGGTGAGG...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 90 bp ATTGCCCTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTaGTGTGGCACCTCCCACGCCATTGTGGGACTCATGGCCAATGGT +
Preference number: 2 (lower is better)
Translates to: IALFGVIANESAPPN*CGTSHAIVGLMANG
Trigger: ACCATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR TCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCTTGCATATAGACCAGTaGGAAGCTGGAGCTAGCACC +
Preference number: 2 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLLHIDQ*EAGAST
Trigger: GGTGCTAGCTCCAGCTTCTCACTGGTCTATATGCAA...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR TCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCATTGCATATAGACCAGTaGGAAGCTGGAGCTAGCACC +
Preference number: 2 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPLHIDQ*EAGAST
Trigger: GGTGCTAGCTCCAGCTTCTCACTGGTCTATATGCAA...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATCCTCACCCCCACCTGTaGTTTGCATATAGACCAGTG +
Preference number: 2 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHPHPHL*FAYRPV
Trigger: CACTGGTCTATATGCAAAGCACAGGTGGGGGTGAGG...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCCTCGTATGGCCCCATTaGCCTGTTTGGAGTCATAGC +
Preference number: 2 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLLVWPH*PVWSHS
Trigger: GCTATGACTCCAAACAGGGCAATGGGGCCATACGAG...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 90 bp CTGAATGCCACTCCACTCTGCCCTTGGCAGCTCTGGATCCTGGTATaGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTG +
Preference number: 2 (lower is better)
Translates to: LNATPLCPWQLWILV*GAVFGFSSYGPIAL
Trigger: CAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CCA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCCCCTCCCAACTTGTGTaGCACCTCCCACGCCATTGT +
Preference number: 2 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSPSQLV*HLPRHC
Trigger: ACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGG...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCGGCAGCTCTGGATCCTaGTATTGGGAGCTGTATTTG +
Preference number: 2 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLGSSGS*YWELYL
Trigger: CAAATACAGCTCCCAATACCAGGATCCAGAGCTGCC...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCCATTGTGGGACTCATaGCCAATGGTAAGTGTTAAC +
Preference number: 2 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFPLWDS*PMVSVN
Trigger: GTTAACACTTACCATTGGCCATGAGTCCCACAATGG...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp GTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGACATAGCCAACGAGAGTaGCCCTCCCAACTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: VLGAVFGFSSYGPIALFGHSQRE*PSQLVW
Trigger: CCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATG...TCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CCA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATCCTCCCACGCCATTGTaGGACTCATGGCCAATGGTA +
Preference number: 2 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYPPTPL*DSWPMV
Trigger: TACCATTGGCCATGAGTCCCACAATGGCGTGGGAGG...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp TCTGCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATATCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SATSRASFRFWSKSSHLISPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...TATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR-3UTR GCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAAACAAATTACAAGCGCTaGCGTTCAGGAGACGGGGGA +
Preference number: 2 (lower is better)
Translates to: ASFRFWSKSSHLIGISKETNYKR*RSGDGG
Trigger: TCCCCCGTCTCCTGAACGGCAGCGCTTGTAATTTGT...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR CCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp TTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 2 (lower is better)
Translates to: FRRRESIPACLGSARTTNCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...GTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR TCA 90 bp TCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SRASFRFWSKSSHLIGISGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...AGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR GCA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAACAAATTACAAGCGCTaGCGTTCAGGAGACGGGGGA +
Preference number: 2 (lower is better)
Translates to: IFRRRESIPACLGSARTTTNYKR*RSGDGG
Trigger: TCCCCCGTCTCCTGAACGGCAGCGCTTGTAATTTGT...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR GCA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAATCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: ASFRFWSKSSHLIGISKESPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR CCA 90 bp CCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 2 (lower is better)
Translates to: PLSSALTRLLGFPLECQQGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp GTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: VSILPLSSALTRLLGFPLCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...CAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCCATTGTGGGACTCATaGCCAATGGTAAGTGTTAAC +
Preference number: 2 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSPLWDS*PMVSVN
Trigger: GTTAACACTTACCATTGGCCATGAGTCCCACAATGG...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR GCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACATCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: IFRRRESIPACLGSARTTSPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR CCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 2 (lower is better)
Translates to: TFKCTNKAAGISTGVSTAGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp AACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 2 (lower is better)
Translates to: NKAAGISTGVSTAVFLLQGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 2 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp TCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 2 (lower is better)
Translates to: SGISTSHQGQHSPTFKCTGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...AGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp GGGCAAAGTCTGAGTAAATCTCATAAATCTTTCGGAGAAGAGAATCTATTCCAGTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 2 (lower is better)
Translates to: GQSLSKSHKSFGEENLFQCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...CTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR GCA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp TTCAAACCCAGACTGTCAGTAACTAGCTTGGAAACTTTGAGGCAGAAAGTCTGCTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: FKPRLSVTSLETLRQKVCCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...GCAGACTTTCTGCCTCAAAGTTTCCAAGCTAGTTACTGACAGTCTGGGTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
3UTR-3UTR CCA 90 bp TCTGCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 2 (lower is better)
Translates to: SATSRASFRFWSKSSHLIKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...TATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR-3UTR TCA 90 bp TCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 2 (lower is better)
Translates to: SRASFRFWSKSSHLIGISLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...AGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
3UTR-3UTR GCA 90 bp TGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: WDFHWSVNSSILVAGTLRQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: SVKAQESVQVIRVSILPLQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR TCA 90 bp GTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCACTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 2 (lower is better)
Translates to: VKAQESVQVIRVSILPLSLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...TGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR-3UTR GCA 90 bp GAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: ESVQVIRVSILPLSSALTQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 2 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR GCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 2 (lower is better)
Translates to: SVQVIRVSILPLSSALTRKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CCA 90 bp TACAACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAATGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: YNIYGPSSSINKSVQSWKCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...TTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
3UTR-3UTR TCA 90 bp GGGCAAAGTCTGAGTAAATCTCATAAATCTTTCGGAGAAGAGAATCTATTCCAGCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 2 (lower is better)
Translates to: GQSLSKSHKSFGEENLFQLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...CTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
3UTR-3UTR CAA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCGCACCTCCCACGCCATaGTGGGACTCATGGCCAATG +
Preference number: 3 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGAPPTP*WDSWPM
Trigger: CATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGC...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CAA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCCACTCCACTCTGCCCTaGGCAGCTCTGGATCCTGGT +
Preference number: 3 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLHSTLP*AALDPG
Trigger: ACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTG...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 72 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTaGCACCTCCCACGCCATTGTGGGACTCATGGCCAA +
Preference number: 3 (lower is better)
Translates to: SHSQRECPSQLV*HLPRHCGTHGQ
Trigger: TTGGCCATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CAA 90 bp GTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAAGTGCCCCTCCCAACTaGTGTGGCACCTCCCACGCC +
Preference number: 3 (lower is better)
Translates to: VLGAVFGFSSYGPIALFGSAPPN*CGTSHA
Trigger: GGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACT...TCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CAA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCGCACCTCCCACGCCATaGTGGGACTCATGGCCAATG +
Preference number: 3 (lower is better)
Translates to: AVFGFSSYGPIALFGVIAAPPTP*WDSWPM
Trigger: CATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGC...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CAA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGTATTGGGAGCTGTATTaGGTTTCTCCTCGTATGGCC +
Preference number: 3 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPYWELY*VSPRMA
Trigger: GGCCATACGAGGAGAAACCAAATACAGCTCCCAATA...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR-3UTR CAA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCTCTGGATCCTGGTATaGGGAGCTGTATTTGGTTTC +
Preference number: 3 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFLWILV*GAVFGF
Trigger: GAAACCAAATACAGCTCCCAATACCAGGATCCAGAG...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR GCA 72 bp GGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTaGCCTGTTTGGAGTCATAGCCAACGAGAGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GSCIWFLLVWPH*PVWSHSQRECP
Trigger: GGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR TCA 72 bp TCCCTCACCCCCACCTGTGCTTTGCATATAGACCAGTaGGAAGCTGGAGCTAGCACCACTGGCTTAGGTTCT +
Preference number: 3 (lower is better)
Translates to: SLTPTCALHIDQ*EAGASTTGLGS
Trigger: AGAACCTAAGCCAGTGGTGCTAGCTCCAGCTTCTCACTGGTCTATATGCAAAGCACAGGTGGGGGTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 72 bp ATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTaGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTT +
Preference number: 3 (lower is better)
Translates to: IWFLLVWPHCPV*SHSQRECPSQL
Trigger: AAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 72 bp TTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTaGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGG +
Preference number: 3 (lower is better)
Translates to: LAALDPGIGSCI*FLLVWPHCPVW
Trigger: CCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CCA 72 bp ACTCTGAATGCCACTCCACTCTGCCCTTGGCAGCTCTaGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: TLNATPLCPWQL*ILVLGAVFGFS
Trigger: GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR TCA 72 bp TCTCAGAATTTGGGGGTCCATAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCCAGCCTTCTCTGCCAC +
Preference number: 3 (lower is better)
Translates to: SQNLGVHNRFSL*PRSKSSSLLCH
Trigger: GTGGCAGAGAAGGCTGGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTTATGGACCCCCAAATTCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
3UTR CCA 72 bp CCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATaGCCCCATTGCCCTGTTTGGAGTCATAGCCAACGA +
Preference number: 3 (lower is better)
Translates to: PGIGSCIWFLLV*PHCPVWSHSQR
Trigger: TCGTTGGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR GCA 72 bp ACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGGATTTCCACTGGAGTG +
Preference number: 3 (lower is better)
Translates to: TSHQGQHSPTFK*TNKAAGISTGV
Trigger: CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR TCA 72 bp CAGAATGTACCCCCTGGAGTTAGGGTGAAGATCAAGTaGGATAAAGCAGGAATGCCTGGCTGTAAGTGCTTG +
Preference number: 3 (lower is better)
Translates to: QNVPPGVRVKIK*DKAGMPGCKCL
Trigger: CAAGCACTTACAGCCAGGCATTCCTGCTTTATCTCACTTGATCTTCACCCTAACTCCAGGGGGTACATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
3UTR-3UTR CAA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: IRVSILPLSSALTRLLGFRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp TGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: CTNKAAGISTGVSTAVFLRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...CAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: GISTSHQGQHSPTFKCTNRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...GTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR GCA 72 bp GGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTGGGGGTCCATAACAGG +
Preference number: 3 (lower is better)
Translates to: GFPLECQQQYSC*RNSQNLGVHNR
Trigger: CCTGTTATGGACCCCCAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTTCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR TCA 72 bp AACTTGATGGAGGGAAGAAGTGTAACAGTGGTTTACTaGGTGTGTAGCCAGAAAGCCTGGTTCAAACCCAGA +
Preference number: 3 (lower is better)
Translates to: NLMEGRSVTVVY*VCSQKAWFKPR
Trigger: TCTGGGTTTGAACCAGGCTTTCTGGCTACACACTCAGTAAACCACTGTTACACTTCTTCCCTCCATCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
3UTR-3UTR CAA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: ILPLSSALTRLLGFPLECTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: STSHQGQHSPTFKCTNKATAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: SVKAQESVQVIRVSILPLTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GGGCAAAGTCTGAGTAAATCTCATAAATCTTTCGGAGAAGAGAATCTATTCCAGGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: GQSLSKSHKSFGEENLFQARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...CTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
3UTR-3UTR CAA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTAAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: TELESKTMVYTEGKSTVLRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: ESVQVIRVSILPLSSALTTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: GPSSSINKSVQSWKVRPWSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...CCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: KSVQSWKVRPWYIQKERASTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: KSVQSWKVRPWYIQKERATAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
3UTR-3UTR CAA 90 bp ATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: IYGPSSSINKSVQSWKVRSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGGGGCGGCTTTCTGGCTaGGCTGCCCTTCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPGRLSG*AALQHH
Trigger: ATGGTGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCC...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCCAGTGGGCGGCTTTCTaGCTGGGCTGCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGQWAAF*LGCPSA
Trigger: TGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCCACTG...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTCTGGGTGGCTGAAGTaGTTTGTGCGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGSGWLK*FVRPAR
Trigger: CCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGA...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATGGGCGGCTTTCTGGCTaGGCTGCCCTTCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHGRLSG*AALQHH
Trigger: ATGGTGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCC...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTCAGTGGGCGGCTTTCTaGCTGGGCTGCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VIANESAPPNLCGTSHAIQWAAF*LGCPSA
Trigger: TGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCCACTG...AATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTCTTCCCTTTCCCCCTaGCAGTGGGCGGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHSSLSP*QWAAFW
Trigger: CCAGAAAGCCGCCCACTGTCAGGGGGAAAGGGAAGA...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCATCGGCTTTCCGACTCTaGATGCCACTCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPSAFRL*MPLHSA
Trigger: GGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCCGA...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: LFGVIANESAPPNLCGTSHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCTGCGGCCAGCACGGCTaGCTTCTTCCTCCTACGAAA +
Preference number: 4 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFCGQHG*LLPPTK
Trigger: TTTCGTAGGAGGAAGAAGGCAGCCGTGCTGGCCGCA...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCGCTTTCTGGCTGGGCTaGCCTTCAGCACCATTGCCA +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGAFWLG*PSAPLP
Trigger: TGGCAATGGTGCTGAAGGGCAGCCCAGCCAGAAAGC...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCCCTCCCAACTTGTGTaGCACCTCCCACGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFPSQLV*HLPRHC
Trigger: ACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGG...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCTTGCTTTGGCAGGGGTaGGTAGGCAGGTCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLLLWQG*VGRSAF
Trigger: GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAA...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATGCCTTCTTCTTGCTTTaGCAGGGGTGGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RECPSQLVWHLPRHCGTHAFFLL*QGWVGR
Trigger: CCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGC...ATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCGCCTTCTTCTTGCTTTaGCAGGGGTGGGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLAFFLL*QGWVGR
Trigger: CCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGC...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: RECPSQLVWHLPRHCGTHSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...ATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATAGCCTTCTGGGTGGCTaGAGTGATTTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHSLLGG*SDLCGQ
Trigger: CTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCT...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ATSRASFRFWSKSSHLIGHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...GCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPNLCGTSHRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCACATCCGCACCAAGATaGGCCGAGTGTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGTSAPR*AECPRR
Trigger: CCTTCTTGGACACTCGGCCCATCTTGGTGCGGATGT...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCGCCAAGCACTACAGTTaGAGCACAGCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGAKHYS*STAFWV
Trigger: CACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGC...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCACCTCCCACGCCATTGTaGGACTCATGGCCAATGGTA +
Preference number: 4 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPPPTPL*DSWPMV
Trigger: TACCATTGGCCATGAGTCCCACAATGGCGTGGGAGG...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATTGCCCTTGGCAGCTCTaGATCCTGGTATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RECPSQLVWHLPRHCGTHCPWQL*ILVLGA
Trigger: AGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCA...ATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTCGCCATCGCTGCCTTaGCGCTCGGAAACTGGTATT +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLSPSLP*RSETGI
Trigger: AATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGA...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: VIANESAPPNLCGTSHAIIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...AATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCTGCGGCCAGCACGGCTaGCTTCTTCCTCCTACGAAA +
Preference number: 4 (lower is better)
Translates to: LFGVIANESAPPNLCGTSCGQHG*LLPPTK
Trigger: TTTCGTAGGAGGAAGAAGGCAGCCGTGCTGGCCGCA...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGCCTCACCCCCACCTGTaGTTTGCATATAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPPHPHL*FAYRPV
Trigger: CACTGGTCTATATGCAAAGCACAGGTGGGGGTGAGG...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCCCTCACCCCCACCTGTaGTTTGCATATAGACCAGTG +
Preference number: 4 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLPHPHL*FAYRPV
Trigger: CACTGGTCTATATGCAAAGCACAGGTGGGGGTGAGG...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATCTTTCCGACTCTGAATaGCACTCCACTCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RECPSQLVWHLPRHCGTHLSDSE*HSTLPL
Trigger: CAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAG...ATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGCTTTCCGACTCTGAATaGCACTCCACTCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPLSDSE*HSTLPL
Trigger: CAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAG...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCTGGTTTCTCCTCGTATaGCCCCATTGCCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLWFLLV*PHCPVW
Trigger: CCAAACAGGGCAATGGGGCCATACGAGGAGAAACCA...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VIANESAPPNLCGTSHAIKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...AATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACCATAGCCAACGAGAGTaGCCCTCCCAACTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPNLCGTSHHSQRE*PSQLVW
Trigger: CCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATG...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCCCCCATTGCCCTGTTTaGAGTCATAGCCAACGAGAG +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLPHCPV*SHSQRE
Trigger: CTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGG...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCAGGCAGCTCTGGATCCTaGTATTGGGAGCTGTATTTG +
Preference number: 4 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPGSSGS*YWELYL
Trigger: CAAATACAGCTCCCAATACCAGGATCCAGAGCTGCC...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 72 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTaGTGTGGCACCTCCCACGCCATTGTGGGACTCATG +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPN*CGTSHAIVGLM
Trigger: CATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TTCTGGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCCTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FWGPSLLLALAGVGRQVGLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...GCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATCTGGGTGGCTGAAGTaGTTTGTGCGGCCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVSGWLK*FVRPAR
Trigger: CCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGA...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp GTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTTTGCATATAGACCAGTaGGAAGCTGGAGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: VIANESAPPNLCGTSHAILHIDQ*EAGAST
Trigger: GGTGCTAGCTCCAGCTTCTCACTGGTCTATATGCAA...AATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp AGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SILPLSSALTRLLGFPLEHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...CTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCGCCCTTCAGCACCATTaGCAAGCACTACAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LFGVIANESAPPNLCGTSALQHH*QALQLE
Trigger: CTCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGC...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCLSLSP*RVAVQL
Trigger: CAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAG...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCTGCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: SATSRASFRFWSKSSHLIRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
CDS-3UTR CCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGGAGCACAGCCTTCTaGGTGGCTGAAGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHWSTAF*VAEVIC
Trigger: ACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCA...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACTGGTTTCTCCTCGTATaGCCCCATTGCCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPNLCGTSHWFLLV*PHCPVW
Trigger: CCAAACAGGGCAATGGGGCCATACGAGGAGAAACCA...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCATTGGGAGCTGTATTTaGTTTCTCCTCGTATGGCCC +
Preference number: 4 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFIGSCI*FLLVWP
Trigger: GGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 72 bp GTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATaGTGGGACTCATGGCCAATGGTAAGTGTTAACTTC +
Preference number: 4 (lower is better)
Translates to: VPLPTCVAPPTP*WDSWPMVSVNF
Trigger: GAAGTTAACACTTACCATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 72 bp ACTCCACTCTGCCCTTGGCAGCTCTGGATCCTGGTATaGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCC +
Preference number: 4 (lower is better)
Translates to: TPLCPWQLWILV*GAVFGFSSYGP
Trigger: GGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 72 bp CGGCTTTCCGACTCTGAATGCCACTCCACTCTGCCCTaGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: RLSDSECHSTLP*AALDPGIGSCI
Trigger: AATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp GTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VIANESAPPNLCGTSHAIGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...AATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCACATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTAHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: AVFGFSSYGPIALFGVIARRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCGCTTTCTGGCTGGGCTaGCCTTCAGCACCATTGCCA +
Preference number: 4 (lower is better)
Translates to: AVFGFSSYGPIALFGVIAAFWLG*PSAPLP
Trigger: TGGCAATGGTGCTGAAGGGCAGCCCAGCCAGAAAGC...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECLSLSP*RVAVQL
Trigger: CAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAG...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPNLCGTSHMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCGCCAAGCACTACAGTTaGAGCACAGCCTTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSAKHYS*STAFWV
Trigger: CACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGC...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SVQVIRVSILPLSSALTRMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKAMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FGVIANESAPPNLCGTSHGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTAGCCTTCTGGGTGGCTaGAGTGATTTGTGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSSLLGG*SDLCGQ
Trigger: CTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCT...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGTCGGCTTTCCGACTCTaGATGCCACTCCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: WYWELYLVSPRMAPLPCLSAFRL*MPLHSA
Trigger: GGCAGAGTGGAGTGGCATTCAGAGTCGGAAAGCCGA...CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp TCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SGISTSHQGQHSPTFKCTHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...AGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SVQVIRVSILPLSSALTRHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: GCWDFHWSVNSSILVAGTRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...AGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp AGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: SILPLSSALTRLLGFPLERRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...CTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATSRASFRFWSKSSHLIGSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...GCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
CDS-3UTR GCA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTACATAGCCAACGAGAGTaGCCCTCCCAACTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVHSQRE*PSQLVW
Trigger: CCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATG...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCCTCGTATGGCCCCATTaGCCTGTTTGGAGTCATAGC +
Preference number: 4 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSLVWPH*PVWSHS
Trigger: GCTATGACTCCAAACAGGGCAATGGGGCCATACGAG...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLLSLSP*RVAVQL
Trigger: CAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAG...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SVQVIRVSILPLSSALTRLSLSP*RVAVQL
Trigger: CAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAG...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTARMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: SSALTRLLGFPLECQQQYRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...ATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: AVFGFSSYGPIALFGVIACSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGACCCTCCCAACTTGTGTaGCACCTCCCACGCCATTGT +
Preference number: 4 (lower is better)
Translates to: VLGAVFGFSSYGPIALFGPSQLV*HLPRHC
Trigger: ACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGG...TCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTTTGCTTTGGCAGGGGTaGGTAGGCAGGTCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSLLWQG*VGRSAF
Trigger: GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAA...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTACTGTTTGTTTCTaGGGACCAAGCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPTTVCF*GPSLLL
Trigger: AAGAAGAAGGCTTGGTCCCCAGAAACAAACAGTAGT...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
3UTR CAA 72 bp CTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTaGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LGSSGSWYWELY*VSPRMAPLPCL
Trigger: CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: HSPTFKCTNKAAGISTGVAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: GCWDFHWSVNSSILVAGTAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...AGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LRLRNQYKSSGSAFSHFQMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...TTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCTCGCCATCGCTGCCTTaGCGCTCGGAAACTGGTATT +
Preference number: 4 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCSPSLP*RSETGI
Trigger: AATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGA...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACACATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: IFRRRESIPACLGSARTTHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSSPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFTAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: WYWELYLVSPRMAPLPCLTAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SILPLSSALTRLLGFPLECSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...CTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp TGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGACATCCGCACCAAGATaGGCCGAGTGTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: WYWELYLVSPRMAPLPCLTSAPR*AECPRR
Trigger: CCTTCTTGGACACTCGGCCCATCTTGGTGCGGATGT...CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCCATTGTGGGACTCATaGCCAATGGTAAGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LFGVIANESAPPNLCGTSPLWDS*PMVSVN
Trigger: GTTAACACTTACCATTGGCCATGAGTCCCACAATGG...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTCCTCCCACGCCATTGTaGGACTCATGGCCAATGGTA +
Preference number: 4 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFPPTPL*DSWPMV
Trigger: TACCATTGGCCATGAGTCCCACAATGGCGTGGGAGG...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTCTGGATCCTGGTATTaGGAGCTGTATTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHSGSWY*ELYLVS
Trigger: AGAAACCAAATACAGCTCCCAATACCAGGATCCAGA...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp TGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGTGCCCTTGGCAGCTCTaGATCCTGGTATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WYWELYLVSPRMAPLPCLCPWQL*ILVLGA
Trigger: AGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCA...CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATACTACTGTTTGTTTCTaGGGACCAAGCCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHTTVCF*GPSLLL
Trigger: AAGAAGAAGGCTTGGTCCCCAGAAACAAACAGTAGT...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp TCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: SSALTRLLGFPLECQQQYSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...ATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCATCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTASRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTCGCCATCGCTGCCTTaGCGCTCGGAAACTGGTATT +
Preference number: 4 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCSPSLP*RSETGI
Trigger: AATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGA...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTAIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: NKAAGISTGVSTAVFLLQIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...CTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp TGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGACGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: WDFHWSVNSSILVAGTLRRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...TCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCTCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AVFGFSSYGPIALFGVIASPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGCCCTTCAGCACCATTaGCAAGCACTACAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYALQHH*QALQLE
Trigger: CTCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGC...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCTCGTATGGCCCCATTaGCCTGTTTGGAGTCATAGC +
Preference number: 4 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSLVWPH*PVWSHS
Trigger: GCTATGACTCCAAACAGGGCAATGGGGCCATACGAG...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTAATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCTAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp TGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CTNKAAGISTGVSTAVFLCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...CAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGAGCACAGCCTTCTaGGTGGCTGAAGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVWSTAF*VAEVIC
Trigger: ACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCA...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CCA 90 bp GTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGACCCCATTGCCCTGTTTaGAGTCATAGCCAACGAGAG +
Preference number: 4 (lower is better)
Translates to: VLGAVFGFSSYGPIALFGPHCPV*SHSQRE
Trigger: CTCTCGTTGGCTATGACTCCAAACAGGGCAATGGGG...TCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: WDFHWSVNSSILVAGTLRAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...TCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SVQVIRVSILPLSSALTRAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAAGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: ASFRFWSKSSHLIGISKEAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
CDS-3UTR TCA 90 bp GCAAAGAGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAAATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: AKSLKSRSGSVAFFITPEMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...TTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCTCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp GGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: GISTSHQGQHSPTFKCTNSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...GTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp AGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SILPLSSALTRLLGFPLENRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...CTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VSILPLSSALTRLLGFPLNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...CAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAAAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LPLSSALTRLLGFPLECQNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...TTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTTTGCATATAGACCAGTaGGAAGCTGGAGCTAGCACC +
Preference number: 4 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSLHIDQ*EAGAST
Trigger: GGTGCTAGCTCCAGCTTCTCACTGGTCTATATGCAA...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR GCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTTCGCCATCGCTGCCTTaGCGCTCGGAAACTGGTATT +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKASPSLP*RSETGI
Trigger: AATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGA...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTAAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACTTGATCCCTCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: RESIPACLGSARTTNLIPRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...AGGGATCAAGTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp TTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACCGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: FRRRESIPACLGSARTTNRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...GTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp TTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAACGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LRLRNQYKSSGSAFSHFQRRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...TTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SILPLSSALTRLLGFPLESPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...CTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSPTFKCTNKAAGISTGVSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAATCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLSSALTRLLGFPLECQSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...TTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp TCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTACAAATTACAAGCGCTaGCGTTCAGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRASFRFWSKSSHLIGISTNYKR*RSGDGG
Trigger: TCCCCCGTCTCCTGAACGGCAGCGCTTGTAATTTGT...AGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKATAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCATTGGGAGCTGTATTTaGTTTCTCCTCGTATGGCCC +
Preference number: 4 (lower is better)
Translates to: AVFGFSSYGPIALFGVIAIGSCI*FLLVWP
Trigger: GGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCGATCCAGCGGATAACTaGAAGTTTTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCDPADN*KFSQPQ
Trigger: CTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATC...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAGATCCAGCGGATAACTaGAAGTTTTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSDPADN*KFSQPQ
Trigger: CTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATC...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGATCCAGCGGATAACTaGAAGTTTTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QHSPTFKCTNKAAGISTGDPADN*KFSQPQ
Trigger: CTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATC...TCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTAATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TELESKTMVYTEGKSTVLMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp TTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACTCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: FRRRESIPACLGSARTTNSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...GTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp GAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACATCACGTCCATGCCATTaGTGGCCAGCACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: ESVQVIRVSILPLSSALTSRPCH*WPALHD
Trigger: GTCATGCAGTGCTGGCCATCAATGGCATGGACGTGA...TGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCACTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR GCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKAKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp TTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: FRRRESIPACLGSARTTNIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...GTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCATCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTASPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR GCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp AAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAATCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KAAGISTGVSTAVFLLQESPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...TTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTAAGAAACTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: SRSGSVAFFITPERRFKKLSLSP*RVAVQL
Trigger: CAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAG...TTTCTTAAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp GCAAAGAGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: AKSLKSRSGSVAFFITPERMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCTCTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCRMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACATGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: IFRRRESIPACLGSARTTCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp AGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGAGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SLKSRSGSVAFFITPERRAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...TCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCAATGGCCAGCACTGCATaGCCCACTCGGATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: KSVQSWKVRPWYIQKERAMASTA*PTRMPS
Trigger: GGACGGCATCCGAGTGGGTCATGCAGTGCTGGCCAT...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR TCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp AAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAAGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KAAGISTGVSTAVFLLQEGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...TTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp GTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: VKAQESVQVIRVSILPLSNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...TGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACCTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp AAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAAGTAACAGTGGTTTACTaGGTGTGTAGCCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KAAGISTGVSTAVFLLQEVTVVY*VCSQKA
Trigger: GGCTTTCTGGCTACACACTCAGTAAACCACTGTTAC...TTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR TCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTAACAGTGGTTTACTaGGTGTGTAGCCAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTAVTVVY*VCSQKA
Trigger: GGCTTTCTGGCTACACACTCAGTAAACCACTGTTAC...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp GGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTCGCCATCGCTGCCTTaGCGCTCGGAAACTGGTATT +
Preference number: 4 (lower is better)
Translates to: GPSSSINKSVQSWKVRPWSPSLP*RSETGI
Trigger: AATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGA...CCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp GGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACTCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GISTSHQGQHSPTFKCTNSPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...GTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR GCA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGTCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SVQVIRVSILPLSSALTRSPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR GCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGTCTCCCACTTTCAAGTaGACTAACAAGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLSPTFK*TNKAAG
Trigger: CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: QHSPTFKCTNKAAGISTGESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...TCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp AGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACTTGATCCCTACAAATTACAAGCGCTaGCGTTCAGGAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: RESIPACLGSARTTNLIPTNYKR*RSGDGG
Trigger: TCCCCCGTCTCCTGAACGGCAGCGCTTGTAATTTGT...AGGGATCAAGTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp CATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: HSPTFKCTNKAAGISTGVGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VSILPLSSALTRLLGFPLGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...CAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTCCATTGTGGGACTCATaGCCAATGGTAAGTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFPLWDS*PMVSVN
Trigger: GTTAACACTTACCATTGGCCATGAGTCCCACAATGG...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp TGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAGATCCAGCGGATAACTaGAAGTTTTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: WDFHWSVNSSILVAGTLRDPADN*KFSQPQ
Trigger: CTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATC...TCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GISTSHQGQHSPTFKCTNGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...GTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp TTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAAACAGGTTCAGCCTATaGCCCAGGTCCAAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LRLRNQYKSSGSAFSHFQNRFSL*PRSKSS
Trigger: GGAACTTTTGGACCTGGGTCATAGGCTGAACCTGTT...TTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTAGGGTGAAGATCAAGTaGGATAAAGCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCRVKIK*DKAGMP
Trigger: AGGCATTCCTGCTTTATCTCACTTGATCTTCACCCT...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR TCA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCACTAGCTTGGAAACTTTaGGGCAGAAAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSLAWKL*GRKSAK
Trigger: TTTAGCAGACTTTCTGCCTCAAAGTTTCCAAGCTAG...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGCATGACCCACTCGGATaGCGTCCCGCTGGCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQHDPLG*RPAGRK
Trigger: CTTTCGGCCAGCGGGACGGCATCCGAGTGGGTCATG...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTAGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACA +
Preference number: 4 (lower is better)
Translates to: KSVQSWKVRPWYIQKERARMPSR*PKATNT
Trigger: TGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCG...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: ESVQVIRVSILPLSSALTMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...TGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp TTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: LRLRNQYKSSGSAFSHFQMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...TTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCATGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTACWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: SSALTRLLGFPLECQQQYCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...ATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: IRVSILPLSSALTRLLGFCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATTCTGGATCCTGGTATTaGGAGCTGTATTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYSGSWY*ELYLVS
Trigger: AGAAACCAAATACAGCTCCCAATACCAGGATCCAGA...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTAGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: TELESKTMVYTEGKSTVLAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: PSSSINKSVQSWKVRPWYAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...ATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGCTCATCGTGTAGCTTaGGCAGCAGATCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTAHRVA*AADPAD
Trigger: ATCCGCTGGATCTGCTGCTCAAGCTACACGATGAGC...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAACTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRLRNQYKSSGSAFSHFQLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...TTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp TTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACCTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FRRRESIPACLGSARTTNLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...GTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp GAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACACTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ESVQVIRVSILPLSSALTLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...TGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR GCA 90 bp TCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTAAGAAAATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: SRSGSVAFFITPERRFKKIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...TTTCTTAAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACGTCGGCCGTGTACCTaGCATTCACGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: KSVQSWKVRPWYIQKERARRPCT*HSRPCH
Trigger: ATGGCATGGACGTGAATGGCAGGTACACGGCCGACG...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp AGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SLKSRSGSVAFFITPERRSPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...TCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp CTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LPLSSALTRLLGFPLECQQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp TCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: SGISTSHQGQHSPTFKCTESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...AGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTTAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFCSGDS*EPMAKS
Trigger: GCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACA...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKACWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GGGCAAAGTCTGAGTAAATCTCATAAATCTTTCGGAGAAGAGAATCTATTCCAGCGGGGGACTTACGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: GQSLSKSHKSFGEENLFQRGTYE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGTAAGTCCCCCG...CTGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATTTACTCAGACTTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTCGGGGGACTTACGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFRGTYE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGTAAGTCCCCCG...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp CCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: PLSSALTRLLGFPLECQQLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...CTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR TCA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTCTGGCTGTAAGTGCTTaGAATATGTTCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCLAVSA*NMFHHH
Trigger: ATGATGATGGAACATATTTCAAGCACTTACAGCCAG...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCAATTGATGGCCAGCACTaGATGACCCACTCGGATGCC +
Preference number: 4 (lower is better)
Translates to: KSVQSWKVRPWYIQKERAIDGQH*MTHSDA
Trigger: GGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAAT...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR GCA 90 bp GCAAAGAGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAATCTCCAGCATCTCAATaGCTGAGCTTCCCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AKSLKSRSGSVAFFITPESPASQ*LSFPVQ
Trigger: CTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGA...TTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCTCTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: TFKCTNKAAGISTGVSTAQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp TGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: CTNKAAGISTGVSTAVFLQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...CAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTATGCCTGGCTGTAAGTaGTTGAAATATGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSMPGCK*LKYVPS
Trigger: TGATGGAACATATTTCAAGCACTTACAGCCAGGCAT...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CCA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp GCAAAGAGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAAGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AKSLKSRSGSVAFFITPEGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...TTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCTCTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp AAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: KAAGISTGVSTAVFLLQELEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...TTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp ATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: ILPLSSALTRLLGFPLECLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...ACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTCTGGCTGTAAGTGCTTaGAATATGTTCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKALAVSA*NMFHHH
Trigger: ATGATGATGGAACATATTTCAAGCACTTACAGCCAG...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: STSHQGQHSPTFKCTNKAQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: ASFRFWSKSSHLIGISKEQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
CDS-3UTR GCA 90 bp GGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: GPSSSINKSVQSWKVRPWESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...CCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp GTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAATGCCTGGCTGTAAGTaGTTGAAATATGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VKAQESVQVIRVSILPLSMPGCK*LKYVPS
Trigger: TGATGGAACATATTTCAAGCACTTACAGCCAGGCAT...TGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGACAGCTGGGAGCCGATaGCAAAGAGCGAGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQTAGSR*QRASGT
Trigger: TGTTCCACTCGCTCTTTGCCATCGGCTCCCAGCTGT...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR TCA 90 bp TCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTAAGAAAGATCCAGCGGATAACTaGAAGTTTTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SRSGSVAFFITPERRFKKDPADN*KFSQPQ
Trigger: CTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATC...TTTCTTAAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTCTAGAACCACAAACTTaGTCCCTGTCAGTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFLEPQT*SLSVSG
Trigger: ACCAGACACTGACAGGGATCAAGTTTGTGGTTCTAG...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR TCA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: SVKAQESVQVIRVSILPLLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp AACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: NIYGPSSSINKSVQSWKVKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...TACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp ATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGAAAAAATCGCCATCGCTaGCTTGCCGCTCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: IYGPSSSINKSVQSWKVRKNRHR*LAARKL
Trigger: CAGTTTCCGAGCGGCAAGGCAGCGATGGCGATTTTT...TCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR GCA 90 bp GCAAAGAGCCTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAAGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: AKSLKSRSGSVAFFITPEESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...TTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAGGCTCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTAAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTAAGGGTGAAGATCAAGTaGGATAAAGCAGGAATGCCT +
Preference number: 4 (lower is better)
Translates to: TELESKTMVYTEGKSTVLRVKIK*DKAGMP
Trigger: AGGCATTCCTGCTTTATCTCACTTGATCTTCACCCT...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR GCA 90 bp CCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: PSSSINKSVQSWKVRPWYESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...ATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGATGGCAAAGAGCGAGTaGAACATGGAGGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQMAKSE*NMEASI
Trigger: TATGCTGGCCTCCATGTTCCACTCGCTCTTTGCCAT...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359005.8
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
CDS-3UTR CCA 90 bp CCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: PSSSINKSVQSWKVRPWYGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...ATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTAGGAACTCTCAGAATTTaGGGGTCCATAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: TELESKTMVYTEGKSTVLGTLRI*GSITGS
Trigger: TGAACCTGTTATGGACCCCCAAATTCTGAGAGTTCC...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: VKAQESVQVIRVSILPLSKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...TGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAAAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: ASFRFWSKSSHLIGISKEKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
CDS-3UTR TCA 90 bp ATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGAGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IYGPSSSINKSVQSWKVRGSSAI*MCLSPA
Trigger: TGCTGGAGACAGACACATTCAAATTGCACTGCTACC...TCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
CDS-3UTR TCA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTACTAGCTTGGAAACTTTaGGGCAGAAAGTCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: TELESKTMVYTEGKSTVLLAWKL*GRKSAK
Trigger: TTTAGCAGACTTTCTGCCTCAAAGTTTCCAAGCTAG...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR GCA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTCAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCAGAATCTATTCCAGCTTaGCTAGGATCTGCTAGAACC +
Preference number: 4 (lower is better)
Translates to: KSVQSWKVRPWYIQKERAESIPA*LGSART
Trigger: GGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTC...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR GCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACACAGCAGTATTCTTGTTaGAGGAACTCTCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTQQYSC*RNSQNL
Trigger: CAAATTCTGAGAGTTCCTGCAACAAGAATACTGCTG...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGTGCTGGGATTTCCACTaGAGTGTCAACAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQCWDFH*SVNSSI
Trigger: AATACTGCTGTTGACACTCCAGTGGAAATCCCAGCA...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp GGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: GPSSSINKSVQSWKVRPWKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...CCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp CTAAAATCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: LKSRSGSVAFFITPERRFLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...AAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGATTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CCA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: ICTELESKTMVYTEGKSTKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp CCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: PSSSINKSVQSWKVRPWYKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...ATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR TCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGCTTGAGGGCAAAGTCTaGGTAAATCTCATAAATCTT +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQLEGKV*VNLINL
Trigger: AAGATTTATGAGATTTACTCAGACTTTGCCCTCAAG...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CCA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAATCTGTACAGAGTTaGAAAGTAAGACCATGGTAT +
Preference number: 4 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQKSVQS*KVRPWY
Trigger: ATACCATGGTCTTACTTTCCAACTCTGTACAGATTT...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS GCA 90 bp CCCACCCCCGCACCCGCCACGGGCCCGAGCCTAGCCCACCTCGGATaGCGTCCCGCTGGCCGAAAGCAACCAACACACGCTCATCGTGTA +
Preference number: 5 (lower is better)
Translates to: PTPAPATGPSLAHLG*RPAGRKQPTHAHRV
Trigger: TACACGATGAGCGTGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCGAGGTGGGCTAGGCTCGGGCCCGTGGCGGGTGCGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS CCA 90 bp ACCCGCCACGGGCCCGAGCCTAGCCCACCTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACACGCTCATCGTGTAGCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: TRHGPEPSPPRMPSR*PKATNTRSSCSLSS
Trigger: GCTGCTCAAGCTACACGATGAGCGTGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCGAGGTGGGCTAGGCTCGGGCCCGTGGCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS GCA 90 bp CACTGCATGACCCACTGCAGAGGTGAAGCTAACGGTCAGCGAAGGTaGAGCCCGGGGATTCCGCCGAGGGGACAAGGGACCCGACACAAC +
Preference number: 5 (lower is better)
Translates to: HCMTHCRGEANGQRR*SPGIPPRGQGTRHN
Trigger: GTTGTGTCGGGTCCCTTGTCCCCTCGGCGGAATCCCCGGGCTGCACCTTCGCTGACCGTTAGCTTCACCTCTGCAGTGGGTCATGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS-3UTR CAA 90 bp AACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCAGTGCCCCTCCCAACTaGTGTGGCACCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: NESAPPNLCGTSHAIVGLSAPPN*CGTSHA
Trigger: GGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACT...GAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp CGAAACATCCGCACCAAGATGGGCCGAGTGTCCAAGAAGGCTGAGTaGAGAGAGTCCAGGTTCCGGAGCACCATCCCACGGTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: RNIRTKMGRVSKKAE*RESRFRSTIPRWPS
Trigger: GGAAGGCCACCGTGGGATGGTGCTCCGGAACCTGGACTCTCTTCACTCAGCCTTCTTGGACACTCGGCCCATCTTGGTGCGGATGTTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp CCTACGAAACATCCGCACCAAGATGGGCCGAGTGTCCAAGAAGGCTaGGTGAAGAGAGTCCAGGTTCCGGAGCACCATCCCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PTKHPHQDGPSVQEG*VKRVQVPEHHPTVA
Trigger: GGCCACCGTGGGATGGTGCTCCGGAACCTGGACTCTCTTCACTCAGCCTTCTTGGACACTCGGCCCATCTTGGTGCGGATGTTTCGTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp GAAGCTGGAGCTAGCACCACTGGCTTAGGTTCTTCCCTTTCCCCCTaGCAGTGGGCGGCTTTCTGGCTGGGCTGCCCTTCAGCACCATTG +
Preference number: 5 (lower is better)
Translates to: EAGASTTGLGSSLSP*QWAAFWLGCPSAPL
Trigger: CAATGGTGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCCACTGTCAGGGGGAAAGGGAAGAACCTAAGCCAGTGGTGCTAGCTCCAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGTGGGACTCATCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: RECPSQLVWHLPRHCGTHRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...ATGAGTCCCACAATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCGCACCTCCCACGCCATaGTGGGACTCATGGCCAATG +
Preference number: 5 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLAPPTP*WDSWPM
Trigger: CATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGC...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS GCA 90 bp GGCCGTGTACCTGCCATTCACGTCCATGCCATTGATGGCCAGCACTaGATGACCCACTGCAGAGGTGAAGCTAACGGTCAGCGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: GRVPAIHVHAIDGQH*MTHCRGEANGQRRC
Trigger: GCACCTTCGCTGACCGTTAGCTTCACCTCTGCAGTGGGTCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAGGTACACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS-3UTR CAA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCACCTCCCACGCCATaGTGGGACTCATGGCCAATG +
Preference number: 5 (lower is better)
Translates to: FGVIANESAPPNLCGTSHAPPTP*WDSWPM
Trigger: CATTGGCCATGAGTCCCACAATGGCGTGGGAGGTGC...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCAGCCTTCTTCTTGCTTaGGCAGGGGTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: QAFFLLWQGWVGRSAFRLSLLLA*AGVGRQ
Trigger: CTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCT...GAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GGGGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCGACCAAGCCTTCTTCTaGCTTTGGCAGGGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: GDQAFFLLWQGWVGRSAFDQAFF*LWQGWV
Trigger: TACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTC...GAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp CACCATTGCCAAGCACTACAGTTGGAGCACAGCCTTCTGGGTGGCTaGAGTGATTTGTGCGGCCAGCACGGCTGCCTTCTTCCTCCTACG +
Preference number: 5 (lower is better)
Translates to: HHCQALQLEHSLLGG*SDLCGQHGCLLPPT
Trigger: CGTAGGAGGAAGAAGGCAGCCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCAATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp GTGTACCTGCCATTCACGTCCATGCCATTGATGGCCAGCACTGCATaGCCCACTGCAGAGGTGAAGCTAACGGTCAGCGAAGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: VYLPFTSMPLMASTA*PTAEVKLTVSEGAA
Trigger: GGCTGCACCTTCGCTGACCGTTAGCTTCACCTCTGCAGTGGGTCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAGGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS CCA 90 bp CCCTTCAGCACCATTGCCAAGCACTACAGTTGGAGCACAGCCTTCTaGGTGGCTGAAGTGATTTGTGCGGCCAGCACGGCTGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: PFSTIAKHYSWSTAF*VAEVICAASTAAFF
Trigger: GAAGAAGGCAGCCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS CCA 90 bp TTTCTGGCTGGGCTGCCCTTCAGCACCATTGCCAAGCACTACAGTTaGAGCACAGCCTTCTGGGTGGCTGAAGTGATTTGTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FLAGLPFSTIAKHYS*STAFWVAEVICAAS
Trigger: GCTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGCAGCCCAGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp AGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACGCCATTGCCAAGCACTACAGTaGGAGCACAGCCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SHSQRECPSQLVWHLPRHCQALQ*EHSLLG
Trigger: ACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCA...ATGGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCAGTGCCCCTCCCAACTaGTGTGGCACCTCCCACGCC +
Preference number: 5 (lower is better)
Translates to: AVFGFSSYGPIALFGVIASAPPN*CGTSHA
Trigger: GGCGTGGGAGGTGCCACACAAGTTGGGAGGGGCACT...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCCACTCCACTCTGCCCTaGGCAGCTCTGGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSHSTLP*AALDPG
Trigger: ACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTG...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCGACCAAGCCTTCTTCTaGCTTTGGCAGGGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: LFGVIANESAPPNLCGTSDQAFF*LWQGWV
Trigger: TACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTC...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGACTCTGAATGCCACTCCAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: ALAGVGRQVGFPTLNATPIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TGGAGTGGCATTCAGAGTCGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp TTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCCACTGCCCTTCAGCACCATaGCCAAGCACTACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: FGVIANESAPPNLCGTSHCPSAP*PSTTVG
Trigger: TCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGCA...GTGGGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GGACCAAGCCTTCTTCTTGCTTTGGCAGGGGTGGGTAGGCAGGTCGGCTTTCCGCTCTGGATCCTGGTATaGGGAGCTGTATTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GPSLLLALAGVGRQVGFPLWILV*GAVFGF
Trigger: GAAACCAAATACAGCTCCCAATACCAGGATCCAGAG...CGGAAAGCCGACCTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCATAGCCCACTCCACTCTGCCCTaGGCAGCTCTGGATCCTGGT +
Preference number: 5 (lower is better)
Translates to: AVFGFSSYGPIALFGVIAHSTLP*AALDPG
Trigger: ACCAGGATCCAGAGCTGCCAAGGGCAGAGTGGAGTG...GGCTATGACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp AGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: SHQGQHSPTFKCTNKAAGRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...CCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGTTTGGAGTCATAGCCAACGAGAGTGCCCCTCCCAACTTGTGTGGCACCTCCGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LFGVIANESAPPNLCGTSARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...GGAGGTGCCACACAAGTTGGGAGGGGCACTCTCGTTGGCTATGACTCCAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS CCA 90 bp CAGCAGATCCAGCGGATAACTGAAAGTTTTCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTGGTAAATCAAGCCGCCAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: QQIQRITESFLSLSP*RVAVQLVNQAASFV
Trigger: AACAAAGCTGGCGGCTTGATTTACCAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAGAAAACTTTCAGTTATCCGCTGGATCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000447216.2
ENST00000525079.5
ENST00000525303.5
ENST00000527680.1
ENST00000528230.5
ENST00000531290.5
ENST00000533012.1
ENST00000533058.5
ENST00000533632.6
ENST00000625526.2
ENST00000625680.2
ENST00000626820.2
ENST00000627703.2
ENST00000628720.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
ENST00000630172.1
ENST00000631071.1
CDS CCA 90 bp GACAAATTACAAGCGCTGCCGTTCAGGAGACGGGGGACTTACGAGTaGAACATGGAGGCCAGCATAAGCTTCTCATTAGAAGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: DKLQALPFRRRGTYE*NMEASISFSLEVRR
Trigger: CCGCCTCACTTCTAATGAGAAGCTTATGCTGGCCTCCATGTTCCACTCGTAAGTCCCCCGTCTCCTGAACGGCAGCGCTTGTAATTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000527680.1
ENST00000626820.2
ENST00000630172.1
CDS CCA 90 bp GTCTCCAGCATCTCAATGCCTGAGCTTCCCTGTTCAGGAGACAGCTaGGAGCCGATGGCAAAGAGCCTATATGCAAAGGAGGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: VSSISMPELPCSGDS*EPMAKSLYAKEAKL
Trigger: CAACTTTGCCTCCTTTGCATATAGGCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACAGGGAAGCTCAGGCATTGAGATGCTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533149.1
ENST00000626997.1
CDS-3UTR CAA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATATCGCCATCGCTGCCTaGCCGCTCGGAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYIAIAA*PLGNWY
Trigger: ATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGAT...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: GCWDFHWSVNSSILVAGTRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...AGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp GCCACCTCCAGAGCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ATSRASFRFWSKSSHLIGARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...GCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CAA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTAGCCTTCTTCTTGCTTaGGCAGGGGTGGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSSLLLA*AGVGRQ
Trigger: CTGCCTACCCACCCCTGCCAAAGCAAGAAGAAGGCT...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCATCGCCATCGCTGCCTaGCCGCTCGGAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCIAIAA*PLGNWY
Trigger: ATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGAT...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR CAA 90 bp AGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGATCGCCATCGCTGCCTaGCCGCTCGGAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: RLRNQYKSSGSAFSHFQVIAIAA*PLGNWY
Trigger: ATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGAT...CACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGATCGCCATCGCTGCCTaGCCGCTCGGAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQIAIAA*PLGNWY
Trigger: ATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGAT...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR CAA 90 bp AAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAAATCGCCATCGCTGCCTaGCCGCTCGGAAACTGGTAT +
Preference number: 5 (lower is better)
Translates to: KAAGISTGVSTAVFLLQEIAIAA*PLGNWY
Trigger: ATACCAGTTTCCGAGCGGCAAGGCAGCGATGGCGAT...TTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630169.2
CDS-3UTR CAA 90 bp AACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: NKAAGISTGVSTAVFLLQRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...CTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: IRVSILPLSSALTRLLGFRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...AAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: ALTRLLGFPLECQQQYSCRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...ACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCGCTAGAACCACAAACTaGATCCCTCGGATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GSGISTSHQGQHSPTFKCARTTN*IPRMPS
Trigger: GGACGGCATCCGAGGGATCAAGTTTGTGGTTCTAGC...GCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525303.5
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTTGCCAAGCACTACAGTaGGAGCACAGCCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LVLGAVFGFSSYGPIALFCQALQ*EHSLLG
Trigger: ACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCA...AAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGCCCTTCAGCACCATaGCCAAGCACTACAGTTGGA +
Preference number: 5 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVCPSAP*PSTTVG
Trigger: TCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGCA...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS CCA 90 bp AAAGTTCCAGCCTTCTCTGCCACCTCCAGAGCTAGCTTCAGGTTCTaGTCAAAGAGCTCACACCTGATAGGCATTTCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: KVPAFSATSRASFRF*SKSSHLIGISVSVW
Trigger: CCAGACACTGACAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGCTCTGGAGGTGGCAGAGAAGGCTGGAACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359005.8
ENST00000625526.2
CDS CCA 90 bp TCTCAATGCCTGAGCTTCCCTGTTCAGGAGACAGCTGGGAGCCGATaGCAAAGAGCCTATATGCAAAGGAGGCAAAGTTGCTCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: SQCLSFPVQETAGSR*QRAYMQRRQSCSKE
Trigger: TTCCTTAGAGCAACTTTGCCTCCTTTGCATATAGGCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACAGGGAAGCTCAGGCATTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533149.1
ENST00000626997.1
CDS-3UTR CAA 90 bp TCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: SVQVIRVSILPLSSALTRRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...CCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAACGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: ASFRFWSKSSHLIGISKERSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000533012.1
ENST00000626820.2
ENST00000630040.1
CDS-3UTR CAA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTAGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CTCTGCCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTATTGGGAGCTGTATTaGGTTTCTCCTCGTATGGCC +
Preference number: 5 (lower is better)
Translates to: LCPWQLWILVLGAVFGFSYWELY*VSPRMA
Trigger: GGCCATACGAGGAGAAACCAAATACAGCTCCCAATA...GGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 90 bp CTCCGTGGAGATGCATACCTGTCAGTGTCTGGTAGCAGTGCAATTTaGATGTGTCTGTCTCCAGCATCTCAATGCCTGAGCTTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: LRGDAYLSVSGSSAI*MCLSPASQCLSFPV
Trigger: AACAGGGAAGCTCAGGCATTGAGATGCTGGAGACAGACACATTCAAATTGCACTGCTACCAGACACTGACAGGTATGCATCTCCACGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447216.2
ENST00000631071.1
CDS-3UTR CAA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACACGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: IFRRRESIPACLGSARTTRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CAA 90 bp CATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: HSPTFKCTNKAAGISTGVARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR CAA 90 bp CCCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATATTGGGAGCTGTATTaGGTTTCTCCTCGTATGGCC +
Preference number: 5 (lower is better)
Translates to: PLAALDPGIGSCIWFLLVYWELY*VSPRMA
Trigger: GGCCATACGAGGAGAAACCAAATACAGCTCCCAATA...TACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp TGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: WYWELYLVSPRMAPLPCLIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...CAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: QHSPTFKCTNKAAGISTGRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...TCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: HSPTFKCTNKAAGISTGVRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...CACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: VSILPLSSALTRLLGFPLRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...CAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: CTNKAAGISTGVSTAVFLARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...CAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR CAA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTCTCTGGATCCTGGTATaGGGAGCTGTATTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSLWILV*GAVFGF
Trigger: GAAACCAAATACAGCTCCCAATACCAGGATCCAGAG...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp TGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: CTNKAAGISTGVSTAVFLIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...CAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp AGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: RLRNQYKSSGSAFSHFQVIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...CACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: LLGFPLECQQQYSCCRNSIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...AGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTCGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: LTRLLGFPLECQQQYSCCRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...GCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GCTAGCTTCAGGTTCTGGTCAAAGAGCTCACACCTGATAGGCATTTCTAAGGAAGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: ASFRFWSKSSHLIGISKEARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...TTCCTTAGAAATGCCTATCAGGTGTGAGCTCTTTGACCAGAACCTGAAGCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CAA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR CAA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTAGCTAGAACCACAAACTaGATCCGAGTGGAACATGGA +
Preference number: 5 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVARTTN*IRVEHG
Trigger: TCCATGTTCCACTCGGATCAAGTTTGTGGTTCTAGC...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
CDS-3UTR CAA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACGCTAGAACCACAAACTaGATCCGAGTGGAACATGGA +
Preference number: 5 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHARTTN*IRVEHG
Trigger: TCCATGTTCCACTCGGATCAAGTTTGTGGTTCTAGC...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533012.1
ENST00000630040.1
CDS-3UTR CAA 90 bp TCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: SGISTSHQGQHSPTFKCTIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...AGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp AGTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: SVKAQESVQVIRVSILPLIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...AAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTTACGCTCATCGTGTAGCTaGAGCAGCAGATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: TELESKTMVYTEGKSTVLRSSCS*SSRSSG
Trigger: TCCGCTGGATCTGCTGCTCAAGCTACACGATGAGCG...TAACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: SGISTSHQGQHSPTFKCTRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...AGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: LPLSSALTRLLGFPLECQSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGTCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VSILPLSSALTRLLGFPLSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...CAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ATTGGGAGCTGTATTTGGTTTCTCCTCGTATGGCCCCATTGCCCTGTTTGGAGTTTTTATGACTACTGTTaGTTTCTGGGGACCAAGCCT +
Preference number: 5 (lower is better)
Translates to: IGSCIWFLLVWPHCPVWSFYDYC*FLGTKP
Trigger: AGGCTTGGTCCCCAGAAACAAACAGTAGTCATAAAA...ACTCCAAACAGGGCAATGGGGCCATACGAGGAGAAACCAAATACAGCTCCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp CCTTGGCAGCTCTGGATCCTGGTATTGGGAGCTGTATTTGGTTTCTCCTCGTATTTTTATGACTACTGTTaGTTTCTGGGGACCAAGCCT +
Preference number: 5 (lower is better)
Translates to: PWQLWILVLGAVFGFSSYFYDYC*FLGTKP
Trigger: AGGCTTGGTCCCCAGAAACAAACAGTAGTCATAAAA...ATACGAGGAGAAACCAAATACAGCTCCCAATACCAGGATCCAGAGCTGCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS-3UTR CAA 90 bp ATCTTTCGGAGAAGAGAATCTATTCCAGCTTGCCTAGGATCTGCTAGAACCACAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: IFRRRESIPACLGSARTTIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TGTGGTTCTAGCAGATCCTAGGCAAGCTGGAATAGATTCTCTTCTCCGAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CAA 90 bp CTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: LPLSSALTRLLGFPLECQTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TCTCCCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SPTFKCTNKAAGISTGVSTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CCACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: PLSSALTRLLGFPLECQQTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...CTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: GCWDFHWSVNSSILVAGTTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...AGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: FKCTNKAAGISTGVSTAVSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ACTTTCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: TFKCTNKAAGISTGVSTASTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGCCTGGCTGTAAGTGCTaGAAATATGTTCCATCATCA +
Preference number: 5 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQPGCKC*KYVPSS
Trigger: TGATGATGGAACATATTTCAAGCACTTACAGCCAGG...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CAA 90 bp CTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGCAGGAACTCTCAGCTGTCAGTAACTAGCTaGGAAACTTTGAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: LGFPLECQQQYSCCRNSQLSVTS*ETLRQK
Trigger: TTTCTGCCTCAAAGTTTCCAAGCTAGTTACTGACAG...CTGAGAGTTCCTGCAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CAA 90 bp TCAAGTGCACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SSALTRLLGFPLECQQQYTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...ATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGTGCACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp CTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: LRNQYKSSGSAFSHFQVHTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...GTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp GTGTTAAGGCTCAGGAATCAGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTTCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: VLRLRNQYKSSGSAFSHFSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...AAAGTGGGAGAATGCTGACCCTGATGACTTGTACTGATTCCTGAGCCTTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp AGTACAAGTCATCAGGGTCAGCATTCTCCCACTTTCAAGTGCACTAACAAGGCTCTGTCAGTAACTAGCTaGGAAACTTTGAGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: STSHQGQHSPTFKCTNKALSVTS*ETLRQK
Trigger: TTTCTGCCTCAAAGTTTCCAAGCTAGTTACTGACAG...AGCCTTGTTAGTGCACTTGAAAGTGGGAGAATGCTGACCCTGATGACTTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CAA 90 bp TTTGACTCACTTCCTGTATCTTTCCCCCAAAACCATCGATTAAGACAGATTGCAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: FDSLPVSFPQNHRLRQIAIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TGCAATCTGTCTTAATCGATGGTTTTGGGGGAAAGATACAGGAAGTGAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CAA 90 bp GTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAGTGTAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: VQSWKVRPWYIQKERAQCRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...ACACTGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ACTAACAAGGCTGCTGGGATTTCCACTGGAGTGTCAACAGCAGTATTCTTGTTGACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: TNKAAGISTGVSTAVFLLTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...CAACAAGAATACTGCTGTTGACACTCCAGTGGAAATCCCAGCAGCCTTGTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGAGCTAGAACCACAAACTaGATCCCTCGGATGCCGTCC +
Preference number: 5 (lower is better)
Translates to: IYGPSSSINKSVQSWKVRARTTN*IPRMPS
Trigger: GGACGGCATCCGAGGGATCAAGTTTGTGGTTCTAGC...TCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525303.5
ENST00000630169.2
CDS-3UTR CAA 90 bp TCTAGATCTGGATCGGTTGCGTTTTTCATAACACCAGAACGACGATTTAAGAAAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: SRSGSVAFFITPERRFKKIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TTTCTTAAATCGTCGTTCTGGTGTTATGAAAAACGCAACCGATCCAGATCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525079.5
ENST00000626820.2
CDS-3UTR CAA 90 bp AAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: KSVQSWKVRPWYIQKERAIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TACAACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGCTAGAACCACAAACTaGATCCCTGTCAGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: YNIYGPSSSINKSVQSWKARTTN*IPVSVW
Trigger: CCAGACACTGACAGGGATCAAGTTTGTGGTTCTAGC...TTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434101.6
ENST00000533632.6
ENST00000629243.3
ENST00000629713.2
CDS-3UTR CAA 90 bp AACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAATCAAGCCGCCAGCTTaGTTCACCACATACACACTA +
Preference number: 5 (lower is better)
Translates to: NIYGPSSSINKSVQSWKVIKPPA*FTTYTL
Trigger: TAGTGTGTATGTGGTGAACAAAGCTGGCGGCTTGAT...TACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TACAACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: YNIYGPSSSINKSVQSWKRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...TTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR CAA 90 bp TCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAGGAACTCTCAGAATTaGGGGGTCCATAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSINKSVQSWKVRPWYIQRNSQN*GVHNRF
Trigger: GAACCTGTTATGGACCCCCAAATTCTGAGAGTTCCT...CTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp ATCTGTACAGAGTTGGAAAGTAAGACCATGGTATATACAGAAGGAAAGAGCACAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: ICTELESKTMVYTEGKSTTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TGTGCTCTTTCCTTCTGTATATACCATGGTCTTACTTTCCAACTCTGTACAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000525303.5
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
CDS-3UTR CAA 90 bp TACAACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAATCAACAGCAGTATTCTaGTTGCAGGAACTCTCAGAA +
Preference number: 5 (lower is better)
Translates to: YNIYGPSSSINKSVQSWKSTAVF*LQELSE
Trigger: TTCTGAGAGTTCCTGCAACAAGAATACTGCTGTTGA...TTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS-3UTR CAA 90 bp ATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAGTAAGACCTGGCTGTAAGTGCTaGAAATATGTTCCATCATCA +
Preference number: 5 (lower is better)
Translates to: IYGPSSSINKSVQSWKVRPGCKC*KYVPSS
Trigger: TGATGATGGAACATATTTCAAGCACTTACAGCCAGG...TCTTACTTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533632.6
ENST00000629243.3
CDS-3UTR CAA 90 bp TACAACATTTATGGACCTAGCTCCTCCATAAATAAATCTGTACAGAGTTGGAAAACAGCAGTATTCTTGTaGCAGGAACTCTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: YNIYGPSSSINKSVQSWKTAVFL*QELSEF
Trigger: AAATTCTGAGAGTTCCTGCAACAAGAATACTGCTGT...TTTCCAACTCTGTACAGATTTATTTATGGAGGAGCTAGGTCCATAAATGTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000533012.1
ENST00000533632.6
ENST00000625526.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
CDS GCA 72 bp GCACCCGCCACGGGCCCGAGCCTAGCCCACCTCGGATaGCGTCCCGCTGGCCGAAAGCAACCAACACACGCT +
Preference number: 6 (lower is better)
Translates to: APATGPSLAHLG*RPAGRKQPTHA
Trigger: AGCGTGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCGAGGTGGGCTAGGCTCGGGCCCGTGGCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS CCA 72 bp GGGCCCGAGCCTAGCCCACCTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACACGCTCATCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: GPEPSPPRMPSR*PKATNTRSSCS
Trigger: GCTACACGATGAGCGTGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCGAGGTGGGCTAGGCTCGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS GCA 72 bp ACCCACTGCAGAGGTGAAGCTAACGGTCAGCGAAGGTaGAGCCCGGGGATTCCGCCGAGGGGACAAGGGACC +
Preference number: 6 (lower is better)
Translates to: THCRGEANGQRR*SPGIPPRGQGT
Trigger: GGTCCCTTGTCCCCTCGGCGGAATCCCCGGGCTGCACCTTCGCTGACCGTTAGCTTCACCTCTGCAGTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS TCA 72 bp CGTCGGCCGTGTACCTGCCATTCACGTCCATGCCATTaGTGGCCAGCACTGCATGACCCACTCGGATGCCGT +
Preference number: 6 (lower is better)
Translates to: RRPCTCHSRPCH*WPALHDPLGCR
Trigger: ACGGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAGGTACACGGCCGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000447216.2
ENST00000525079.5
ENST00000527680.1
ENST00000533012.1
ENST00000533058.5
ENST00000533632.6
ENST00000625526.2
ENST00000625680.2
ENST00000626820.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630172.1
ENST00000631071.1
CDS TCA 72 bp CGCACCAAGATGGGCCGAGTGTCCAAGAAGGCTGAGTaGAGAGAGTCCAGGTTCCGGAGCACCATCCCACGG +
Preference number: 6 (lower is better)
Translates to: RTKMGRVSKKAE*RESRFRSTIPR
Trigger: CCGTGGGATGGTGCTCCGGAACCTGGACTCTCTTCACTCAGCCTTCTTGGACACTCGGCCCATCTTGGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 72 bp GCTAGCACCACTGGCTTAGGTTCTTCCCTTTCCCCCTaGCAGTGGGCGGCTTTCTGGCTGGGCTGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: ASTTGLGSSLSP*QWAAFWLGCPS
Trigger: TGAAGGGCAGCCCAGCCAGAAAGCCGCCCACTGTCAGGGGGAAAGGGAAGAACCTAAGCCAGTGGTGCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS CAA 72 bp TGGGCGGCTTTCTGGCTGGGCTGCCCTTCAGCACCATaGCCAAGCACTACAGTTGGAGCACAGCCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: WAAFWLGCPSAP*PSTTVGAQPSG
Trigger: CCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCAATGGTGCTGAAGGGCAGCCCAGCCAGAAAGCCGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 72 bp CATCCGCACCAAGATGGGCCGAGTGTCCAAGAAGGCTaGGTGAAGAGAGTCCAGGTTCCGGAGCACCATCCC +
Preference number: 6 (lower is better)
Translates to: HPHQDGPSVQEG*VKRVQVPEHHP
Trigger: GGGATGGTGCTCCGGAACCTGGACTCTCTTCACTCAGCCTTCTTGGACACTCGGCCCATCTTGGTGCGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS TCA 72 bp CGATGGCAAAGAGCCTGCCATTCACGTCCATGCCATTaGTGGCCAGCACTGCATGACCCACTCGGATGCCGT +
Preference number: 6 (lower is better)
Translates to: RWQRACHSRPCH*WPALHDPLGCR
Trigger: ACGGCATCCGAGTGGGTCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAGGCTCTTTGCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528230.5
ENST00000627703.2
CDS TCA 72 bp CAAGCACTACAGTTGGAGCACAGCCTTCTGGGTGGCTaGAGTGATTTGTGCGGCCAGCACGGCTGCCTTCTT +
Preference number: 6 (lower is better)
Translates to: QALQLEHSLLGG*SDLCGQHGCLL
Trigger: AAGAAGGCAGCCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS GCA 72 bp CCTGCCATTCACGTCCATGCCATTGATGGCCAGCACTaGATGACCCACTGCAGAGGTGAAGCTAACGGTCAG +
Preference number: 6 (lower is better)
Translates to: PAIHVHAIDGQH*MTHCRGEANGQ
Trigger: CTGACCGTTAGCTTCACCTCTGCAGTGGGTCATGCAGTGCTGGCCATCAATGGCATGGACGTGAATGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531290.5
ENST00000628720.2
CDS CCA 72 bp AGAACCACAAACTTGATCCCTCGGATGCCGTCCCGCTaGCCGAAAGCAACCAACACACGCTCATCGTGTAGC +
Preference number: 6 (lower is better)
Translates to: RTTNLIPRMPSR*PKATNTRSSCS
Trigger: GCTACACGATGAGCGTGTGTTGGTTGCTTTCGGCCAGCGGGACGGCATCCGAGGGATCAAGTTTGTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525303.5
ENST00000630169.2
CDS CCA 72 bp ACCATTGCCAAGCACTACAGTTGGAGCACAGCCTTCTaGGTGGCTGAAGTGATTTGTGCGGCCAGCACGGCT +
Preference number: 6 (lower is better)
Translates to: TIAKHYSWSTAF*VAEVICAASTA
Trigger: AGCCGTGCTGGCCGCACAAATCACTTCAGCCACCCAGAAGGCTGTGCTCCAACTGTAGTGCTTGGCAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533058.5
ENST00000625680.2
CDS CCA 72 bp CAGCGGATAACTGAAAGTTTTCTCAGCCTCAGCCCGTaGCGCGTAGCTGTCCAACTGGTAAATCAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: QRITESFLSLSP*RVAVQLVNQAA
Trigger: GGCGGCTTGATTTACCAGTTGGACAGCTACGCGCCACGGGCTGAGGCTGAGAAAACTTTCAGTTATCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000359005.8
ENST00000434101.6
ENST00000447216.2
ENST00000525079.5
ENST00000525303.5
ENST00000527680.1
ENST00000528230.5
ENST00000531290.5
ENST00000533012.1
ENST00000533058.5
ENST00000533632.6
ENST00000625526.2
ENST00000625680.2
ENST00000626820.2
ENST00000627703.2
ENST00000628720.2
ENST00000629243.3
ENST00000629713.2
ENST00000630040.1
ENST00000630169.2
ENST00000630172.1
ENST00000631071.1
CDS CCA 72 bp CAAGCGCTGCCGTTCAGGAGACGGGGGACTTACGAGTaGAACATGGAGGCCAGCATAAGCTTCTCATTAGAA +
Preference number: 6 (lower is better)
Translates to: QALPFRRRGTYE*NMEASISFSLE
Trigger: TTCTAATGAGAAGCTTATGCTGGCCTCCATGTTCCACTCGTAAGTCCCCCGTCTCCTGAACGGCAGCGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525079.5
ENST00000527680.1
ENST00000626820.2
ENST00000630172.1
CDS CCA 72 bp CTGAGCTTCCCTGTTCAGGAGACAGCTGGGAGCCGATaGCAAAGAGCCTATATGCAAAGGAGGCAAAGTTGC +
Preference number: 6 (lower is better)
Translates to: LSFPVQETAGSR*QRAYMQRRQSC
Trigger: GCAACTTTGCCTCCTTTGCATATAGGCTCTTTGCCATCGGCTCCCAGCTGTCTCCTGAACAGGGAAGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533149.1
ENST00000626997.1
CDS TCA 72 bp CTTTGGGAGGCGGGCAATCACCTGAGGTCGGGAGTTTaGGACCACCATGACCAATATGGAGAAACACCATCT +
Preference number: 6 (lower is better)
Translates to: LWEAGNHLRSGV*DHHDQYGETPS
Trigger: AGATGGTGTTTCTCCATATTGGTCATGGTGGTCTCAAACTCCCGACCTCAGGTGATTGCCCGCCTCCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000447216.2
ENST00000524797.1
ENST00000630535.1
ENST00000631071.1
CDS TCA 72 bp GGGCAATCACCTGAGGTCGGGAGTTTGAGACCACCATaGCCAATATGGAGAAACACCATCTCTAATAAAAAC +
Preference number: 6 (lower is better)
Translates to: GQSPEVGSLRPP*PIWRNTISNKN
Trigger: GTTTTTATTAGAGATGGTGTTTCTCCATATTGGTCATGGTGGTCTCAAACTCCCGACCTCAGGTGATTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000447216.2
ENST00000524797.1
ENST00000630535.1
ENST00000631071.1
CDS CAA 72 bp ATTCCAGCTTGCCTAGGATCTGCTAGAACCACAAACTaGATCCCTGGAGAGAGACCAAGAATGGTTACCAAA +
Preference number: 6 (lower is better)
Translates to: IPACLGSARTTN*IPGERPRMVTK
Trigger: TTTGGTAACCATTCTTGGTCTCTCTCCAGGGATCAAGTTTGTGGTTCTAGCAGATCCTAGGCAAGCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524797.1
ENST00000630535.1
CDS TCA 72 bp CTTTGTTATGTCACCCACCTGATTAAGACCAGGCTTTaGGTTCTAGCTCTGCCACTTACTAACAGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: LCYVTHLIKTRL*VLALPLTNSFG
Trigger: TCCAAAACTGTTAGTAAGTGGCAGAGCTAGAACTCAAAGCCTGGTCTTAATCAGGTGGGTGACATAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524797.1
ENST00000630535.1