Pregenerated sensors for TRAPPC13 (Homo sapiens)
Ensembl gene IDs: ENSG00000113597Ensembl transcript IDs: ENST00000231526.8, ENST00000399438.8, ENST00000415825.2, ENST00000438419.6, ENST00000504243.5, ENST00000504751.5, ENST00000505108.1, ENST00000505553.5, ENST00000509234.1, ENST00000512009.5
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCTTTGGCTTTAGGCAGTATAAGTACTGGCGTGTATCCATTGGTTaGAAATATGCTCTTGACCCAAACGTAGACACACATTCTCCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: FFGFRQYKYWRVSIG*KYALDPNVDTHSPA Trigger: AGCTGGAGAATGTGTGTCTACGTTTGGGTCAAGAGCATATTTGCAACCAATGGATACACGCCAGTACTTATACTGCCTAAAGCCAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACTTGCTAGGGACAAATaGTCTCAGATACACAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FCLLAALEVRWQSSVFVTLARDK*SQIHSF Trigger: AAAGCTGTGTATCTGAGACCATTTGTCCCTAGCAAG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCCTTAATGATGCCTGCTTTTTCTGCAAATTCATTCTTTGGCTTTAGGCAGCGTGTATCCATTGGTTaGAAATATGCTCTTGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: TPLMMPAFSANSFFGFRQRVSIG*KYALDP Trigger: TGGGTCAAGAGCATATTTGCAACCAATGGATACACG...CTGCCTAAAGCCAAAGAATGAATTTGCAGAAAAAGCAGGCATCATTAAGGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR CAA 90 bp | CTTGTACCTTACATAAAAAGTGTGCTGACTCGTGTTCTAGATAACTaGCTAGGGACAAATGGTCTCAGATACACAGCTTTTGGAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LVPYIKSVLTRVLDN*LGTNGLRYTAFGEQ Trigger: TTGTTCTCCAAAAGCTGTGTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACTTTTTATGTAAGGTACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAATTTAATTCTGTTACAACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PNVDTHSPAWLTEFNSVTTEVTL*IVKFGF Trigger: AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGT...TGTAACAGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR TCA 72 bp | GTACTGGCGTGTATCCATTGGTTGCAAATATGCTCTTaGCCCAAACGTAGACACACATTCTCCAGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLACIHWLQICS*PKRRHTFSSLA Trigger: AGCCAAGCTGGAGAATGTGTGTCTACGTTTGGGTCAAGAGCATATTTGCAACCAATGGATACACGCCAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACGTGTTCTAGATAACTaGCTAGGGACAAATGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FCLLAALEVRWQSSVFVTRVLDN*LGTNGL Trigger: GAGACCATTTGTCCCTAGCAAGTTATCTAGAACACG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| 3UTR TCA 72 bp | CTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTaGCAGAAACCTTACGGCCTGCAAAGCCTAAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLKYDGRVQYL*QKPYGLQSLKY Trigger: ATATTTTAGGCTTTGCAGGCCGTAAGGTTTCTGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| 3UTR GCA 72 bp | TTTAGGCAGTATAAGTACTGGCGTGTATCCATTGGTTaGAAATATGCTCTTGACCCAAACGTAGACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: FRQYKYWRVSIG*KYALDPNVDTH Trigger: ATGTGTGTCTACGTTTGGGTCAAGAGCATATTTGCAACCAATGGATACACGCCAGTACTTATACTGCCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCTTAATGATGCCTGCTTTTTCTGCAAATTCATTCTTTGGCTTTAGGCAGTTTCTCCAGCCTGAGTaGTATAACTCACAGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: TPLMMPAFSANSFFGFRQFLQPE*YNSQHI Trigger: TATGTGCTGTGAGTTATACAACTCAGGCTGGAGAAA...CTGCCTAAAGCCAAAGAATGAATTTGCAGAAAAAGCAGGCATCATTAAGGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR-3UTR CAA 90 bp | ACATTGTACATAATAGATGGCTCCAGTGAAACCTTCTCCATAAACATAGGTGAGTTTCTCCAGCCTGAGTaGTATAACTCACAGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: TLYIIDGSSETFSINIGEFLQPE*YNSQHI Trigger: TATGTGCTGTGAGTTATACAACTCAGGCTGGAGAAA...CTCACCTATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATTATGTACAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACCTCCCCGGTTCAAGTaGTTCTCCTGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTPPRFK*FSCLSF Trigger: GAAGCTGAGGCAGGAGAATCACTTGAACCGGGGAGG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCCTCCCCGGTTCAAGTaGTTCTCCTGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYPPRFK*FSCLSF Trigger: GAAGCTGAGGCAGGAGAATCACTTGAACCGGGGAGG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTTTAGCGCCAGCAGGTaGTCCTGTTTAGGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYFSASR*SCLGGF Trigger: GAATCCCCCTAAACAGGAGCACCTGCTGGCGCTAAA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTCGCTCAGGCTAGAGTaGAGTAGCATGATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSLRLE*SSMISA Trigger: AGCCGAGATCATGCTACTGCACTCTAGCCTGAGCGA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACCTGGAGCCATTCTTTaGAGTTGGCTGGTCTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTPGAIL*SWLVCN Trigger: GTTACAGACCAGCCAACTTCAAAGAATGGCTCCAGG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACACAGAGCGAAGAACTTaGATGCAGCTTTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYTERRT*MQLSQL Trigger: CAGCTGGGAAAGCTGCATCCAAGTTCTTCGCTCTGT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAGCGAAGAACTTGGATaGAGCTTTCCCAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTSEELG*SFPSCL Trigger: AAGACAGCTGGGAAAGCTGCATCCAAGTTCTTCGCT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAGCGAAGAACTTGGATaGAGCTTTCCCAGCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSEELG*SFPSCL Trigger: AAGACAGCTGGGAAAGCTGCATCCAAGTTCTTCGCT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACGTCTTAAGCCAGAGATaGTTTGCAGTCCCTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYVLSQR*FAVPVL Trigger: CAGTACAGGGACTGCAAAGCATCTCTGGCTTAAGAC...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATGCACCATTAACGGTTaGAGGATCATCTCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTCTING*RIISHQ Trigger: CTGATGAGAGATGATCCTTCAACCGTTAATGGTGCA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAGAGTTCAGTATTTGTaGCAGAAACCTTACGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYRVQYL*QKPYGL Trigger: CAGGCCGTAAGGTTTCTGTCACAAATACTGAACTCT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCTCTATCTTCTAGATTaGGGTCAGCCAACTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYLYLLD*GQPTIP Trigger: GGGTATAGTTGGCTGACCTCAATCTAGAAGATAGAG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACTCTATCTTCTAGATTaGGGTCAGCCAACTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTLYLLD*GQPTIP Trigger: GGGTATAGTTGGCTGACCTCAATCTAGAAGATAGAG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAAGCCAGAGATGCTTTaGAGTCCCTGTACTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTKPEML*SPCTEE Trigger: TTCTTCAGTACAGGGACTGCAAAGCATCTCTGGCTT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCTTCCCGAGTCCAACTaGTTCTTTTTGTGTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYLPESN*FFLCTP Trigger: TGGTGTACACAAAAAGAAGCAGTTGGACTCGGGAAG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACAGCCACTGCAGCATTaGAGGCTGAAAGATTTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTQPLQH*RLKDLN Trigger: GTTTAAATCTTTCAGCCTCCAATGCTGCAGTGGCTG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAGGCAGTATAAGTACTaGCGTGTATCCATTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTRQYKY*RVSIGC Trigger: GCAACCAATGGATACACGCCAGTACTTATACTGCCT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAGGCAGTATAAGTACTaGCGTGTATCCATTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYRQYKY*RVSIGC Trigger: GCAACCAATGGATACACGCCAGTACTTATACTGCCT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATTGCAAATATGCTCTTaGCCCAAACGTAGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTLQICS*PKRRHT Trigger: TGTGTGTCTACGTTTGGGTCAAGAGCATATTTGCAA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCGTGTATCCATTGGTTaGAAATATGCTCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYRVSIG*KYALDP Trigger: TGGGTCAAGAGCATATTTGCAACCAATGGATACACG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AAATATGCTCTTGACCCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAACGTGTATCCATTGGTTaGAAATATGCTCTTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: KYALDPNVDTHSPAWLTERVSIG*KYALDP Trigger: TGGGTCAAGAGCATATTTGCAACCAATGGATACACG...TTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGGGTCAAGAGCATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTCATCTCTCATCAGCTaGTTAAAGAGATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSSLIS*LKRSPG Trigger: ACCTGGAGATCTCTTTAACCAGCTGATGAGAGATGA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATCATCTCTCATCAGCTaGTTAAAGAGATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTSSLIS*LKRSPG Trigger: ACCTGGAGATCTCTTTAACCAGCTGATGAGAGATGA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AAATATGCTCTTGACCCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAATCATCTCTCATCAGCTaGTTAAAGAGATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KYALDPNVDTHSPAWLTESSLIS*LKRSPG Trigger: ACCTGGAGATCTCTTTAACCAGCTGATGAGAGATGA...TTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGGGTCAAGAGCATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAGAAATTCCACACCAGTaGATGGAATTGGTATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTEIPHQ*MELVLH Trigger: GTGCAATACCAATTCCATCCACTGGTGTGGAATTTC...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACGCTCTTGAAGTACGATaGCAGAGTTCAGTATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYALEVR*QSSVFV Trigger: CACAAATACTGAACTCTGCCATCGTACTTCAAGAGC...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCCTTAATGATGCCTGCTTTTTCTGCAAATTCATTCTTTGGCTTTAGGCAGTGCACCATTAACGGTTaGAGGATCATCTCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPLMMPAFSANSFFGFRQCTING*RIISHQ Trigger: CTGATGAGAGATGATCCTTCAACCGTTAATGGTGCA...CTGCCTAAAGCCAAAGAATGAATTTGCAGAAAAAGCAGGCATCATTAAGGGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAATAGATGGCTCCAGTaGAACCTTCTCCATAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYNRWLQ*NLLHKH Trigger: ATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAATAGATGGCTCCAGTaGAACCTTCTCCATAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTNRWLQ*NLLHKH Trigger: ATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | ACATACCAAGATGTGTGTTCCAATTTCTTTGACTTCATGATGTATGACATCATCTTTAGCGCCAGCAGGTaGTCCTGTTTAGGGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TYQDVCSNFFDFMMYDIIFSASR*SCLGGF Trigger: GAATCCCCCTAAACAGGAGCACCTGCTGGCGCTAAA...GATGATGTCATACATCATGAAGTCAAAGAAATTGGAACACACATCTTGGTATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000504751.5 |
||
| CDS-3UTR CCA 90 bp | CCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAATTTAATTCTGTTACAAGGCAGTATAAGTACTaGCGTGTATCCATTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVDTHSPAWLTEFNSVTRQYKY*RVSIGC Trigger: GCAACCAATGGATACACGCCAGTACTTATACTGCCT...TGTAACAGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAACATCTCCATAACCTaGAGCCATTCTTTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTNISIT*SHSLKL Trigger: CAACTTCAAAGAATGGCTCCAGGTTATGGAGATGTT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAAGGTTTACGGTATCTaGTATTGCCTCCAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYKVYGI*YCLQRQ Trigger: TTGTCTTTGGAGGCAATACCAGATACCGTAAACCTT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAAGGTTTACGGTATCTaGTATTGCCTCCAAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTKVYGI*YCLQRQ Trigger: TTGTCTTTGGAGGCAATACCAGATACCGTAAACCTT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATTCCACACCAGTGGATaGAATTGGTATTGCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTFHTSG*NWYCTF Trigger: AAATGTGCAATACCAATTCCATCCACTGGTGTGGAA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTTCCACACCAGTGGATaGAATTGGTATTGCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYFHTSG*NWYCTF Trigger: AAATGTGCAATACCAATTCCATCCACTGGTGTGGAA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | ACATTGTACATAATAGATGGCTCCAGTGAAACCTTCTCCATAAACATAGGTGAGTGCACCATTAACGGTTaGAGGATCATCTCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLYIIDGSSETFSINIGECTING*RIISHQ Trigger: CTGATGAGAGATGATCCTTCAACCGTTAATGGTGCA...CTCACCTATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATTATGTACAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAGGATGGAATTGGTATTaGACATTTCCAAAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTGWNWY*TFPKPD Trigger: ATCTGGTTTTGGAAATGTGCAATACCAATTCCATCC...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATACCACACAGACTTGTaGGATGTCATCATATTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTYHTDL*DVIIFI Trigger: TATGAATATGATGACATCGCACAAGTCTGTGTGGTA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAACACATTCTCCAGCTTaGCTGACTGAATTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTTHSPA*LTEFNS Trigger: AGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACACACATTCTCCAGCTTaGCTGACTGAATTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYTHSPA*LTEFNS Trigger: AGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAACCAGTGGATGGAATTaGTATTGCACATTTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCLLAALEVRWQSSVFVTTSGWN*YCTFPK Trigger: TTTTGGAAATGTGCAATACCAATTCCATCCACTGGT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYTEVTL*IVKFGF Trigger: AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399438.8 |
||
| 3UTR CAA 72 bp | TACATAAAAAGTGTGCTGACTCGTGTTCTAGATAACTaGCTAGGGACAAATGGTCTCAGATACACAGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YIKSVLTRVLDN*LGTNGLRYTAF Trigger: AAAAGCTGTGTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACTTTTTATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR TCA 90 bp | ACATACCAAGATGTGTGTTCCAATTTCTTTGACTTCATGATGTATGACATCATCTTGCAAATATGCTCTTaGCCCAAACGTAGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: TYQDVCSNFFDFMMYDIILQICS*PKRRHT Trigger: TGTGTGTCTACGTTTGGGTCAAGAGCATATTTGCAA...GATGATGTCATACATCATGAAGTCAAAGAAATTGGAACACACATCTTGGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CCA 90 bp | ACATACCAAGATGTGTGTTCCAATTTCTTTGACTTCATGATGTATGACATCATCTCATCTCTCATCAGCTaGTTAAAGAGATCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYQDVCSNFFDFMMYDIISSLIS*LKRSPG Trigger: ACCTGGAGATCTCTTTAACCAGCTGATGAGAGATGA...GATGATGTCATACATCATGAAGTCAAAGAAATTGGAACACACATCTTGGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS-3UTR CCA 90 bp | TTCATCAGTCACAGAACTGAGGTCACTCTCTGCATTGTAAAATTTGGTTTTCACACACATTCTCCAGCTTaGCTGACTGAATTTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FISHRTEVTLCIVKFGFHTHSPA*LTEFNS Trigger: AGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGT...GTGAAAACCAAATTTTACAATGCAGAGAGTGACCTCAGTTCTGTGACTGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| 3UTR CAA 72 bp | TGCAAAGTTGTTTATCACCTCAACTTTCTCACTGCTTaGCTCATAACTAAGTGTGATTACATGGAGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CKVVYHLNFLTA*LITKCDYMERE Trigger: TTCTCTCTCCATGTAATCACACTTAGTTATGAGCAAAGCAGTGAGAAAGTTGAGGTGATAAACAACTTTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR GCA 90 bp | ACATACCAAGATGTGTGTTCCAATTTCTTTGACTTCATGATGTATGACATCATCACTGAGGTCACTCTCTaGATTGTAAAATTTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYQDVCSNFFDFMMYDIITEVTL*IVKFGF Trigger: AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGT...GATGATGTCATACATCATGAAGTCAAAGAAATTGGAACACACATCTTGGTATGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS CCA 90 bp | ATCTGCCTGTCTGGATGTTGGCCTTCTGGTTCTATTACTCAACACTaGCCTCCTGGTGCTGATCTGGTGCTACCATTTTTCTGGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: ICLSGCWPSGSITQH*PPGADLVLPFFWET Trigger: AGTCTCCCAGAAAAATGGTAGCACCAGATCAGCACCAGGAGGCCAGTGTTGAGTAATAGAACCAGAAGGCCAACATCCAGACAGGCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS GCA 90 bp | ACTGAAGAAAGCAGAGTAAGGGCAAGACAGAGCGAAGAACTTGGATaGAGCTTTCCCAGCTGTCTTCCTGAAATTCCACACCAGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TEESRVRARQSEELG*SFPSCLPEIPHQWM Trigger: CATCCACTGGTGTGGAATTTCAGGAAGACAGCTGGGAAAGCTGCATCCAAGTTCTTCGCTCTGTCTTGCCCTTACTCTGCTTTCTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000231526.8 ENST00000399438.8 ENST00000415825.2 ENST00000438419.6 ENST00000505108.1 ENST00000505553.5 ENST00000509234.1 ENST00000512009.5 |
||
| CDS CCA 90 bp | GCACAGGGTCTTTGCCCTGTATTGTTGTTTACTGAGCTCACGATGTaGCAGACACTGAGTAAGGCCATGTCCCTTCTCCTGAATAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQGLCPVLLFTELTM*QTLSKAMSLLLNNS Trigger: GGAATTATTCAGGAGAAGGGACATGGCCTTACTCAGTGTCTGCCACATCGTGAGCTCAGTAAACAACAATACAGGGCAAAGACCCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS TCA 90 bp | ATGTTGGCCTTCTGGTTCTATTACTCAACACTGGCCTCCTGGTGCTaGTCTGGTGCTACCATTTTTCTGGGAGACTTCCACACATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MLAFWFYYSTLASWC*SGATIFLGDFHTFV Trigger: CACAAATGTGTGGAAGTCTCCCAGAAAAATGGTAGCACCAGATCAGCACCAGGAGGCCAGTGTTGAGTAATAGAACCAGAAGGCCAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACGACAGAGCGAAGAACTaGGATGCAGCTTTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYDRAKN*DAAFPA Trigger: AGCTGGGAAAGCTGCATCCAAGTTCTTCGCTCTGTC...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAGACAGAGCGAAGAACTaGGATGCAGCTTTCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTDRAKN*DAAFPA Trigger: AGCTGGGAAAGCTGCATCCAAGTTCTTCGCTCTGTC...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS CCA 90 bp | CTTGGATGCAGCTTTCCCAGCTGTCTTCCTGAAATTCCACACCAGTaGATGGAATTGGTATTGCACATTTCCAAAACCAGATCCATAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGCSFPSCLPEIPHQ*MELVLHISKTRSIV Trigger: GACTATGGATCTGGTTTTGGAAATGTGCAATACCAATTCCATCCACTGGTGTGGAATTTCAGGAAGACAGCTGGGAAAGCTGCATCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000231526.8 ENST00000399438.8 ENST00000415825.2 ENST00000438419.6 ENST00000505108.1 ENST00000505553.5 ENST00000509234.1 ENST00000512009.5 |
||
| CDS TCA 90 bp | AAAGGAGCCAGGAAGAAAATCATGACTTTTTACAAGACGCACAGATaGGGATGGATTATAACAACACGAAGGCTTGGAACAGGCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: KGARKKIMTFYKTHR*GWIITTRRLGTGHG Trigger: GCCATGGCCTGTTCCAAGCCTTCGTGTTGTTATAATCCATCCTCATCTGTGCGTCTTGTAAAAAGTCATGATTTTCTTCCTGGCTCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTCAGCCACTGCAGCATaGGAGGCTGAAAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSATAA*EAERFK Trigger: TTTAAATCTTTCAGCCTCCAATGCTGCAGTGGCTGA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATCAGCCACTGCAGCATaGGAGGCTGAAAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTSATAA*EAERFK Trigger: TTTAAATCTTTCAGCCTCCAATGCTGCAGTGGCTGA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACACTGGCGTGTATCCATaGGTTGCAAATATGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYTGVYP*VANMLL Trigger: CAAGAGCATATTTGCAACCAATGGATACACGCCAGT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCGTGTTCTAGATAACTaGCTAGGGACAAATGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYRVLDN*LGTNGL Trigger: GAGACCATTTGTCCCTAGCAAGTTATCTAGAACACG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTTTCTCCAGCCTGAGTaGTATAACTCACAGCACATA | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYFLQPE*YNSQHI Trigger: TATGTGCTGTGAGTTATACAACTCAGGCTGGAGAAA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATTTCTCCAGCCTGAGTaGTATAACTCACAGCACATA | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTFLQPE*YNSQHI Trigger: TATGTGCTGTGAGTTATACAACTCAGGCTGGAGAAA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACACCAGTGGATGGAATaGGTATTGCACATTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTHQWME*VLHISK Trigger: TTTGGAAATGTGCAATACCAATTCCATCCACTGGTG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACAGATACCACACAGACTaGTGCGATGTCATCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYRYHTD*CDVIIF Trigger: GAATATGATGACATCGCACAAGTCTGTGTGGTATCT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAAGATACCACACAGACTaGTGCGATGTCATCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTRYHTD*CDVIIF Trigger: GAATATGATGACATCGCACAAGTCTGTGTGGTATCT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTCAGATACACAGCTTTaGGAGAACAAAGTCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSDTQL*ENKVQW Trigger: CCATTGGACTTTGTTCTCCAAAAGCTGTGTATCTGA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATCAGATACACAGCTTTaGGAGAACAAAGTCCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTSDTQL*ENKVQW Trigger: CCATTGGACTTTGTTCTCCAAAAGCTGTGTATCTGA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACACTCTATCTTCTAGATaGAGGTCAGCCAACTATACC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYTLSSR*RSANYT Trigger: GGTATAGTTGGCTGACCTCAATCTAGAAGATAGAGT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACAACTCTATCTTCTAGATaGAGGTCAGCCAACTATACC | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTTLSSR*RSANYT Trigger: GGTATAGTTGGCTGACCTCAATCTAGAAGATAGAGT...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTCCAACTGCTTCTTTTaGTGTACACCACTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYSNCFF*CTPLYF Trigger: AAAGTACAGTGGTGTACACAAAAAGAAGCAGTTGGA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATCCAACTGCTTCTTTTaGTGTACACCACTGTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTSNCFF*CTPLYF Trigger: AAAGTACAGTGGTGTACACAAAAAGAAGCAGTTGGA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACTTAAACGCTGAGAACTaGTCTGAAGATCAGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYLNAEN*SEDQLL Trigger: TAAAAGCTGATCTTCAGACAAGTTCTCAGCGTTTAA...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACATTAAACGCTGAGAACTaGTCTGAAGATCAGCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTLNAEN*SEDQLL Trigger: TAAAAGCTGATCTTCAGACAAGTTCTCAGCGTTTAA...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGTACATAATAGATGGCTCCAGTGAAACCTTCTCCATAAACATAGGTGAGTCAGCCACTGCAGCATaGGAGGCTGAAAGATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLYIIDGSSETFSINIGESATAA*EAERFK Trigger: TTTAAATCTTTCAGCCTCCAATGCTGCAGTGGCTGA...CTCACCTATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATTATGTACAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACCTGCAAATTCATTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYLQIHS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCAAAGAATGAATTTGCAG...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGCCTACTGGCTGCTCTTGAAGTACGATGGCAGAGTTCAGTATTTGTGACACTGCAAATTCATTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCLLAALEVRWQSSVFVTLQIHS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCAAAGAATGAATTTGCAG...TGTCACAAATACTGAACTCTGCCATCGTACTTCAAGAGCAGCCAGTAGGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | AAATATGCTCTTGACCCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAACTGCAAATTCATTCTTaGGCTTTAGGCAGTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KYALDPNVDTHSPAWLTELQIHS*ALGSIS Trigger: ACTTATACTGCCTAAAGCCAAAGAATGAATTTGCAG...TTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGGGTCAAGAGCATATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CAA 90 bp | AGTGTGCTGACTCGTGTTCTAGATAACTTGCTAGGGACAAATGGTCTCAGATACATGAAAAGCCTAACATaGGAAGTTTCCTTCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVLTRVLDNLLGTNGLRYMKSLT*EVSFSF Trigger: AAAGCTGAAGGAAACTTCCAATGTTAGGCTTTTCAT...GTATCTGAGACCATTTGTCCCTAGCAAGTTATCTAGAACACGAGTCAGCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000231526.8 ENST00000399438.8 |
||
| CDS-3UTR CAA 90 bp | CCAAACGTAGACACACATTCTCCAGCTTGGCTGACTGAATTTAATTCTGTTACATTAAACGCTGAGAACTaGTCTGAAGATCAGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PNVDTHSPAWLTEFNSVTLNAEN*SEDQPK Trigger: TTTGGGCTGATCTTCAGACAAGTTCTCAGCGTTTAA...TGTAACAGAATTAAATTCAGTCAGCCAAGCTGGAGAATGTGTGTCTACGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CAA 90 bp | TACTTCATCAGTCACAGAACTGAGGTCACTCTCTGCATTGTAAAATTTGGTTTTACTGGCGTGTATCCATaGGTTGCAAATATGCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YFISHRTEVTLCIVKFGFTGVYP*VANMLL Trigger: CAAGAGCATATTTGCAACCAATGGATACACGCCAGT...AAAACCAAATTTTACAATGCAGAGAGTGACCTCAGTTCTGTGACTGATGAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504243.5 |
||
| CDS-3UTR CAA 90 bp | ACATTGTACATAATAGATGGCTCCAGTGAAACCTTCTCCATAAACATAGGTGAGTTAAACGCTGAGAACTaGTCTGAAGATCAGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLYIIDGSSETFSINIGELNAEN*SEDQPK Trigger: TTTGGGCTGATCTTCAGACAAGTTCTCAGCGTTTAA...CTCACCTATGTTTATGGAGAAGGTTTCACTGGAGCCATCTATTATGTACAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS-3UTR CAA 90 bp | ACATACCAAGATGTGTGTTCCAATTTCTTTGACTTCATGATGTATGACATCATCTTTCTCCAGCCTGAGTaGTATAACTCACAGCACATA | + |
|
Preference number: 5 (lower is better) Translates to: TYQDVCSNFFDFMMYDIIFLQPE*YNSQHI Trigger: TATGTGCTGTGAGTTATACAACTCAGGCTGGAGAAA...GATGATGTCATACATCATGAAGTCAAAGAAATTGGAACACACATCTTGGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504243.5 ENST00000504751.5 |
||
| CDS CCA 90 bp | TTCGAATCAATGATCTCCCCTTACATTAAATCCATAAGCAATGTTTaGTTTCTTAATACTCAAGATACAGCTCAAGTACAAGCATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FESMISPYIKSISNV*FLNTQDTAQVQACL Trigger: GAGGCATGCTTGTACTTGAGCTGTATCTTGAGTATTAAGAAACCAAACATTGCTTATGGATTTAATGTAAGGGGAGATCATTGATTCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS TCA 90 bp | TTGAGATGGCTACTATGTGCCAGAGACCAAGGTGGATGCACTACATaGATATTGTTAATTTCACAAAAATCCAGTAAGACTTATATATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRWLLCARDQGGCTT*ILLISQKSSKTYIC Trigger: ACATATATAAGTCTTACTGGATTTTTGTGAAATTAACAATATTCATGTAGTGCATCCACCTTGGTCTCTGGCACATAGTAGCCATCTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS TCA 72 bp | TTCTGGTTCTATTACTCAACACTGGCCTCCTGGTGCTaGTCTGGTGCTACCATTTTTCTGGGAGACTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FWFYYSTLASWC*SGATIFLGDFH Trigger: GTGGAAGTCTCCCAGAAAAATGGTAGCACCAGATCAGCACCAGGAGGCCAGTGTTGAGTAATAGAACCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CCA 72 bp | TCTGGATGTTGGCCTTCTGGTTCTATTACTCAACACTaGCCTCCTGGTGCTGATCTGGTGCTACCATTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGCWPSGSITQH*PPGADLVLPFF Trigger: GAAAAATGGTAGCACCAGATCAGCACCAGGAGGCCAGTGTTGAGTAATAGAACCAGAAGGCCAACATCCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CAA 90 bp | CCCAGCTGTCTTCCTGAAATTCCACACCAGTGGATGGAATTGGTATaGCACATTTCCAAAACCAGATCCATAGTCCTTTCACTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSCLPEIPHQWMELV*HISKTRSIVLSLLE Trigger: CTCCAGCAGTGAAAGGACTATGGATCTGGTTTTGGAAATGTGCAATACCAATTCCATCCACTGGTGTGGAATTTCAGGAAGACAGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000415825.2 ENST00000512009.5 |
||
| CDS CAA 90 bp | CCCAGCTGTCTTCCTGAAATTCCACACCAGTGGATGGAATTGGTATaGCACATTTCCAAAACCAGATCCATAGTCCTTTCACTGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSCLPEIPHQWMELV*HISKTRSIVLSLLQ Trigger: CTGCAGCAGTGAAAGGACTATGGATCTGGTTTTGGAAATGTGCAATACCAATTCCATCCACTGGTGTGGAATTTCAGGAAGACAGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000438419.6 ENST00000505553.5 |
||
| CDS CCA 72 bp | TGGCCTCCTGGTGCTGATCTGGTGCTACCATTTTTCTaGGAGACTTCCACACATTTGTGTCTAATCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WPPGADLVLPFF*ETSTHLCLILL Trigger: CAACAAGATTAGACACAAATGTGTGGAAGTCTCCCAGAAAAATGGTAGCACCAGATCAGCACCAGGAGGCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CAA 90 bp | AGCTTTCCCAGCTGTCTTCCTGAAATTCCACACCAGTGGATGGAATaGGTATTGCACATTTCCAAAACCAGATCCATAGTCCTTTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SFPSCLPEIPHQWME*VLHISKTRSIVLSL Trigger: CAGTGAAAGGACTATGGATCTGGTTTTGGAAATGTGCAATACCAATTCCATCCACTGGTGTGGAATTTCAGGAAGACAGCTGGGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000231526.8 ENST00000399438.8 ENST00000415825.2 ENST00000438419.6 ENST00000505108.1 ENST00000505553.5 ENST00000509234.1 ENST00000512009.5 |
||
| CDS CAA 72 bp | TTAACTTGTATATGCCTGAATCTCCCTAACAAGCATTaGAGATGGCTACTATGTGCCAGAGACCAAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTCICLNLPNKH*RWLLCARDQGG Trigger: TCCACCTTGGTCTCTGGCACATAGTAGCCATCTCAAATGCTTGTTAGGGAGATTCAGGCATATACAAGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CAA 90 bp | GGTGCTGATCTGGTGCTACCATTTTTCTGGGAGACTTCCACACATTaGTGTCTAATCTTGTTGCCATATATTCTCACTATTTCTGTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GADLVLPFFWETSTH*CLILLPYILTISVR Trigger: CCTAACAGAAATAGTGAGAATATATGGCAACAAGATTAGACACAAATGTGTGGAAGTCTCCCAGAAAAATGGTAGCACCAGATCAGCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CCA 72 bp | GCAGGTGAGGTAGAAAGGACATCCATCTACAAACAGTaGCATTACCTGCAGTTTGTTATTTTACAGGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: AGEVERTSIYKQ*HYLQFVILQVI Trigger: TATTACCTGTAAAATAACAAACTGCAGGTAATGCCACTGTTTGTAGATGGATGTCCTTTCTACCTCACCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS CAA 90 bp | TTTATAATATTAACTTGTATATGCCTGAATCTCCCTAACAAGCATTaGAGATGGCTACTATGTGCCAGAGACCAAGGTGGATGCACTACA | + |
|
Preference number: 6 (lower is better) Translates to: FIILTCICLNLPNKH*RWLLCARDQGGCTT Trigger: TGTAGTGCATCCACCTTGGTCTCTGGCACATAGTAGCCATCTCAAATGCTTGTTAGGGAGATTCAGGCATATACAAGTTAATATTATAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||
| CDS TCA 72 bp | AGGAAGAAAATCATGACTTTTTACAAGACGCACAGATaGGGATGGATTATAACAACACGAAGGCTTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: RKKIMTFYKTHR*GWIITTRRLGT Trigger: TGTTCCAAGCCTTCGTGTTGTTATAATCCATCCTCATCTGTGCGTCTTGTAAAAAGTCATGATTTTCTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000512009.5 |
||