Pregenerated sensors for TRAPPC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170043Ensembl transcript IDs: ENST00000303731.9, ENST00000540486.5, ENST00000571739.5, ENST00000571947.5, ENST00000572656.2, ENST00000573989.1, ENST00000575639.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGTTCGGAAGGGCCCCAGGCAGACATGAATTCTCCTGAGACTTaGGGTAGGTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: TGSEGPQADMNSPET*GRLLQPARAEKKGR Trigger: TCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCCCTTCCGAACCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGTGGGGGCCCTTAGTTaGCACAGGTTCGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TLVGGEHQGRPLGCCSGQVGALS*HRFGRA Trigger: GGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCAC...CTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRSIRQGIKLERGPGVEVRPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR-3UTR CCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGGTGGGGGCCCTTAGTTaGCACAGGTTCGGAAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGVGALS*HRFGRA Trigger: GGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCAC...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCCAGCGGGCACAGGGGCCCCAGGCAGACATaGATTCTCCTGAGACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSRERKSSLCTVWPSGHRGPRQT*ILLRLE Trigger: CTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCC...CCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR GCA 90 bp | GCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ANIGVQSGAKELTLHSLARPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...GGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000571739.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGAGAGCGAACATAGGAGTCCGAAAGAGCTCACTTTaGACAGTTTGGCCCAGCGGG | + |
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Preference number: 2 (lower is better) Translates to: VASASPGGEEGQRANIGVRKSSL*TVWPSG Trigger: CCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCG...GACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR CCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGTGCGGGGGCTTACAGTaGGGGCCCTTAGTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGCGGLQ*GPLVGT Trigger: TGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCA...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGTGCGGGGGCTTACAGTaGGGGCCCTTAGTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: SRSIRQGIKLERGPGVEVCGGLQ*GPLVGT Trigger: TGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCA...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGAGCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACTGCGGGGGCTTACAGTaGGGGCCCTTAGTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: GQRANIGVQSGAKELTLHCGGLQ*GPLVGT Trigger: TGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCA...GTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGCTCTCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR CAA 90 bp | CAGAGAGCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTaGCACAGTTTGGCCCAGCGGGCACAGGGGATTCTTCACCACCAG | + |
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Preference number: 2 (lower is better) Translates to: QRANIGVQSGAKELT*HSLAQRAQGILHHQ Trigger: CTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGCTCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR TCA 90 bp | CATACAGCGCACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAGGCCCCAGGCAGACATaGATTCTCCTGAGACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: HTAHCRCGAAHLGWVPRPGPRQT*ILLRLE Trigger: CTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCC...TGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR CCA 90 bp | GCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCGCAGCACATCTCGGATaGGTCCCACGCCCAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: ANIGVQSGAKELTLHSLAAAHLG*VPRPSQ Trigger: CTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGC...GGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR CAA 90 bp | AACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTaGGCCCAGCGGGCACAGGGGATTCTTCACCACCAGCTCCACATA | + |
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Preference number: 2 (lower is better) Translates to: NIGVQSGAKELTLHS*AQRAQGILHHQLHI Trigger: TATGTGGAGCTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR GCA 90 bp | TTATTCTGTGCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LFCASRSIRQGIKLERGPRPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...AGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGCACAGAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR TCA 72 bp | GAAGGGCCCCAGGCAGACATGAATTCTCCTGAGACTTaGGGTAGGTTGCTTCAGCCAGCCCGGGCGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: EGPQADMNSPET*GRLLQPARAEK Trigger: CTTCTCCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR CCA 72 bp | TCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTaGCCCAGCGGGCACAGGGGATTCTTCACCACCAGC | + |
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Preference number: 3 (lower is better) Translates to: SSRERKSSLCTV*PSGHRGFFTTS Trigger: GCTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR CAA 90 bp | GTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGAGAGCGAACATAGGAGTCGTATTCATGACAACTTaGATCCCAGTGGGCGTCTCG | + |
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Preference number: 3 (lower is better) Translates to: VASASPGGEEGQRANIGVVFMTT*IPVGVS Trigger: CGAGACGCCCACTGGGATCAAAGTTGTCATGAATAC...GACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| 3UTR-3UTR CAA 90 bp | CATACAGCGCACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAGTATTCATGACAACTTaGATCCCAGTGGGCGTCTCG | + |
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Preference number: 3 (lower is better) Translates to: HTAHCRCGAAHLGWVPRPVFMTT*IPVGVS Trigger: CGAGACGCCCACTGGGATCAAAGTTGTCATGAATAC...TGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CCA 90 bp | GGGTGCGGGGGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCGCCGCCCCCACTCCTTaGGCTCGGGTTCCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: GCGGLQWGPLVGTGSEGPAAPTP*ARVPGP Trigger: GGGTCCGGGAACCCGAGCCCAAGGAGTGGGGGCGGC...GGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000303731.9 ENST00000575639.1 |
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| CDS-3UTR TCA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGCAGGGCAGGGAGTGTaGGCCTCGCTCCGGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SGRRRASGQAFRLLLWAGAGQGV*ASLRGR Trigger: GCGGCCCCGGAGCGAGGCTCACACTCCCTGCCCTGC...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303731.9 |
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| CDS-3UTR TCA 90 bp | AGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCCAGCGGGCACAGGGGAGCAGGGCAGGGAGTGTaGGCCTCGCTCCGGGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SRERKSSLCTVWPSGHRGAGQGV*ASLRGR Trigger: GCGGCCCCGGAGCGAGGCTCACACTCCCTGCCCTGC...TCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | GGGTGCGGGGGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GCGGLQWGPLVGTGSEGPRPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...GGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | GCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGCCGCCCCCACTCCTTaGGCTCGGGTTCCCGGACCC | + |
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Preference number: 4 (lower is better) Translates to: ASRSIRQGIKLERGPGVEAAPTP*ARVPGP Trigger: GGGTCCGGGAACCCGAGCCCAAGGAGTGGGGGCGGC...CTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303731.9 |
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| CDS-3UTR TCA 90 bp | GGGTGCGGGGGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCGGCCCCAGGCAGACATaGATTCTCCTGAGACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GCGGLQWGPLVGTGSEGPGPRQT*ILLRLE Trigger: CTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCC...GGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | GGGTGCGGGGGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCGAAAGAGCTCACTTTaGACAGTTTGGCCCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GCGGLQWGPLVGTGSEGPRKSSL*TVWPSG Trigger: CCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCG...GGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CCA 90 bp | TGGCCCAGCGGGCACAGGGGATTCTTCACCACCAGCTCCACATACAGCGCACTGGTGGGGGCCCTTAGTTaGCACAGGTTCGGAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WPSGHRGFFTTSSTYSALVGALS*HRFGRA Trigger: GGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCAC...CAGTGCGCTGTATGTGGAGCTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SGRRRASGQAFRLLLWAGRPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | CTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGTGCGGGGGCTTACAGTaGGGGCCCTTAGTTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LVGGEHQGRPLGCCSGQGCGGLQ*GPLVGT Trigger: TGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCA...CCCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | GGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACCGAAAGAGCTCACTTTaGACAGTTTGGCCCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GLQWGPLVGTGSEGPQADRKSSL*TVWPSG Trigger: CCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCG...GTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CCA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGCAGCACATCTCGGATaGGTCCCACGCCCAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SGRRRASGQAFRLLLWAGAAHLG*VPRPSQ Trigger: CTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGC...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | CTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGTCACTTTGCACAGTTTaGCCCAGCGGGCACAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: LVGGEHQGRPLGCCSGQGSLCTV*PSGHRG Trigger: TCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGA...CCCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | CAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAATACTGGAGAGAGGGCCTaGTGTGGAGGTGGAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: QWGPLVGTGSEGPQADMNTGERA*CGGGGT Trigger: AGTCCCTCCACCTCCACACCAGGCCCTCTCTCCAGT...ATTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGACTGGAGAGAGGGCCTaGTGTGGAGGTGGAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: SGRRRASGQAFRLLLWAGTGERA*CGGGGT Trigger: AGTCCCTCCACCTCCACACCAGGCCCTCTCTCCAGT...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | GGGTGCGGGGGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCATCCTTCCTCCTCCTTaGGAATCCCTGCTTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GCGGLQWGPLVGTGSEGPILPPP*ESLLAS Trigger: AGAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGAT...GGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | GGCTTACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACTCCCTGCTTGCTTCTTaGGGTGCCATTCGCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GLQWGPLVGTGSEGPQADSLLAS*GAIRCS Trigger: ACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGA...GTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGTAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | ACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGAGACTTGAGGTAGGTTaGTTCAGCCAGCCCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLVGGEHQGRPLGCCSGQRLEVG*FSQPGR Trigger: CCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCT...CTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | GAGCTCACTTTGCACAGTTTGGCCCAGCGGGCACAGGGGATTCTTCACCACCAGAGACTTGAGGTAGGTTaGTTCAGCCAGCCCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ELTLHSLAQRAQGILHHQRLEVG*FSQPGR Trigger: CCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCT...CTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | GCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGAGGCCTTTAGGCTGTTaGTCTGGGCAGGGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASRSIRQGIKLERGPGVERPLGC*SGQGVG Trigger: CCCCACCCCCTGCCCAGAGCAACAGCCTAAAGGCCT...CTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | CACATACAGCGCACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCGCAGCACATCTCGGATaGGTCCCACGCCCAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: HIQRTVDVVQHISDGSHAAAHLG*VPRPSQ Trigger: CTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGC...GGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTGCGCTGTATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CCA 90 bp | CTTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGTGGGGGCCCTTAGTTaGCACAGGTTCGGAAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LHSGRRRASGQAFRLLLWVGALS*HRFGRA Trigger: GGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCAC...CCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| 3UTR CAA 72 bp | GTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTaGGCCCAGCGGGCACAGGGGATTCTTCACCACCAG | + |
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Preference number: 4 (lower is better) Translates to: VQSGAKELTLHS*AQRAQGILHHQ Trigger: CTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR TCA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGGCCCCAGGCAGACATaGATTCTCCTGAGACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGRRRASGQAFRLLLWAGGPRQT*ILLRLE Trigger: CTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCC...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | GGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAATTCTCCTTGTGGACAGTCATCTaGAGGGCAGGGAGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GALSWHRFGRAPGRHEFSLWTVI*RAGSVS Trigger: GCTCACACTCCCTGCCCTGCAGATGACTGTCCACAA...GGAGAATTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303731.9 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGAGACTTGAGGTAGGTTaGTTCAGCCAGCCCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGRLEVG*FSQPGR Trigger: CCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCT...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGGCAGCACATCTCGGATaGGTCCCACGCCCAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGAAHLG*VPRPSQ Trigger: CTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGC...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | CACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAAGTCAGTATGTGGGGGCCCTTAGTTaGCACAGGTTCGGAAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCRCGAAHLGWVPRPSQYVGALS*HRFGRA Trigger: GGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCAC...ATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CCA 90 bp | GGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCCAGCGGGCACAGGGGATTCTTACTGGAGAGAGGGCCTaGTGTGGAGGTGGAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GAKELTLHSLAQRAQGILTGERA*CGGGGT Trigger: AGTCCCTCCACCTCCACACCAGGCCCTCTCTCCAGT...AAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGTTGTGGACAGTCATCTaGAGGGCAGGGAGTGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLVGGEHQGRPLGCCSGQLWTVI*RAGSVS Trigger: GCTCACACTCCCTGCCCTGCAGATGACTGTCCACAA...CTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303731.9 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAAGTCAGTATAGACTTGAGGTAGGTTaGTTCAGCCAGCCCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HCRCGAAHLGWVPRPSQYRLEVG*FSQPGR Trigger: CCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCT...ATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | ACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGCGGAACTGCTCCGAGTaGCCGTCAAGAGTTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLVGGEHQGRPLGCCSGQRNCSE*PSRVTS Trigger: GGAAGTAACTCTTGACGGGCACTCGGAGCAGTTCCG...CTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540486.5 |
||
| CDS-3UTR CCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGTCACTTTGCACAGTTTaGCCCAGCGGGCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGSLCTV*PSGHRG Trigger: TCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGA...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | ATTCTCCTGAGACTTGAGGTAGGTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGTCACTTTGCACAGTTTaGCCCAGCGGGCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLRLEVGCFSQPGRRRRSLCTV*PSGHRG Trigger: TCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGA...CCTTCTTCTCCGCCCGGGCTGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR TCA 90 bp | CTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGGAATTCTCCTGAGACTTaGGGTAGGTTGCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVGGEHQGRPLGCCSGQGNSPET*GRLLQP Trigger: TGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAATT...CCCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | CTTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSGRRRASGQAFRLLLWLLGNP*LLLAVP Trigger: TGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAG...CCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
||
| CDS-3UTR GCA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSIRQGIKLERGPGVEVLLGNP*LLLAVP Trigger: TGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAG...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
||
| CDS-3UTR GCA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGCGAAAGAGCTCACTTTaGACAGTTTGGCCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSIRQGIKLERGPGVEVRKSSL*TVWPSG Trigger: CCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCG...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
||
| CDS-3UTR GCA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGGACAGTCATCGGAACTaGTCCGAGTGCCCGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRSIRQGIKLERGPGVEVDSHRN*SECPSR Trigger: TCTTGACGGGCACTCGGAGCAGTTCCGATGACTGTC...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540486.5 |
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| CDS-3UTR CCA 90 bp | CACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAAGTCAGTATTCACTTTGCACAGTTTaGCCCAGCGGGCACAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCRCGAAHLGWVPRPSQYSLCTV*PSGHRG Trigger: TCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGA...ATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR CCA 90 bp | GAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCCATGCGGGGGCTTACAGTaGGGGCCCTTAGTTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: EHRSPVGSERAHFAQFGPCGGLQ*GPLVGT Trigger: TGTGCCAACTAAGGGCCCCCACTGTAAGCCCCCGCA...TGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR TCA 90 bp | GGTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGAGAGCGAACATAGGAGTAATTCTCCTGAGACTTaGGGTAGGTTGCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCFSQPGRRRRAESEHRSNSPET*GRLLQP Trigger: TGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAATT...ACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR GCA 90 bp | TTCACTCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGTCCCTGCTTGCTTCTTaGGGTGCCATTCGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTLVGGEHQGRPLGCCSGSLLAS*GAIRCS Trigger: ACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGA...CCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR GCA 90 bp | GCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACAGTTTGGCCCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ANIGVQSGAKELTLHSLALLGNP*LLLAVP Trigger: TGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAG...GGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| 3UTR CAA 72 bp | AACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTaGCACAGTTTGGCCCAGCGGGCACAGGGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NIGVQSGAKELT*HSLAQRAQGIL Trigger: AAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | TTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAATTCTCCTGAGACTCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVGTGSEGPQADMNSPETLLGNP*LLLAVP Trigger: TGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAG...AGTCTCAGGAGAATTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | ACTGTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAAGTCAGTATTTCCCTGCTTGCTTCTTaGGGTGCCATTCGCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVDVVQHISDGSHAQVSISLLAS*GAIRCS Trigger: ACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGA...AATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR TCA 90 bp | TGTGCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGAATTCTCCTGAGACTTaGGGTAGGTTGCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CASRSIRQGIKLERGPGVNSPET*GRLLQP Trigger: TGGCTGAAGCAACCTACCTCAAGTCTCAGGAGAATT...CACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CCA 90 bp | GTAGATGTGGTGCAGCACATCTCGGATGGGTCCCACGCCCAAGTCAGTATTCATATCCTTCCTCCTCCTTaGGAATCCCTGCTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDVVQHISDGSHAQVSIHILPPP*ESLLAS Trigger: AGAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGAT...ATGAATACTGACTTGGGCGTGGGACCCATCCGAGATGTGCTGCACCACATCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR GCA 90 bp | GCCCAAGTCAGTATTCATGACAACTTTGATCCCAGTGGGCGTCTCGTAGTAATGCGAAAGAGCTCACTTTaGACAGTTTGGCCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQVSIHDNFDPSGRLVVMRKSSL*TVWPSG Trigger: CCCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCG...CATTACTACGAGACGCCCACTGGGATCAAAGTTGTCATGAATACTGACTTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR TCA 90 bp | ATTCATGACAACTTTGATCCCAGTGGGCGTCTCGTAGTAATGGAGTTTGTAACGGGCCCCAGGCAGACATaGATTCTCCTGAGACTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHDNFDPSGRLVVMEFVTGPRQT*ILLRLE Trigger: CTCAAGTCTCAGGAGAATTCATGTCTGCCTGGGGCC...CGTTACAAACTCCATTACTACGAGACGCCCACTGGGATCAAAGTTGTCATGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS GCA 90 bp | GGGTTCTCGCTCGGCCGCGGCTGGGCATTAACTCCGCTCCAGTGCTaGTTGTCAGACTCCGCCTCCCTCCCTCAGCCAATCTGTGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GFSLGRGWALTPLQC*LSDSASLPQPICGH Trigger: GTGGCCACAGATTGGCTGAGGGAGGGAGGCGGAGTCTGACAAGCAGCACTGGAGCGGAGTTAATGCCCAGCCGCGGCCGAGCGAGAACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572656.2 |
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| CDS-3UTR CAA 90 bp | GGTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGAGAGCGAACATAGGAGTGCGAAAGAGCTCACTTaGCACAGTTTGGCCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GCFSQPGRRRRAESEHRSAKELT*HSLAQR Trigger: CCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGC...ACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CAA 90 bp | GTTGCTTCAGCCAGCCCGGGCGGAGAAGAAGGGCAGAGAGCGAACATAGGAGTCGCGAAAGAGCTCACTTaGCACAGTTTGGCCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VASASPGGEEGQRANIGVAKELT*HSLAQR Trigger: CCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGC...GACTCCTATGTTCGCTCTCTGCCCTTCTTCTCCGCCCGGGCTGGCTGAAGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CAA 90 bp | TCTGGTAGGAGGAGAGCATCAGGGCAGGCCTTTAGGCTGTTGCTCTGGGCAGGGCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SGRRRASGQAFRLLLWAGLGNPC*LLAVPF Trigger: GAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAG...CCCTGCCCAGAGCAACAGCCTAAAGGCCTGCCCTGATGCTCTCCTCCTACCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CAA 90 bp | TGGCCCAGCGGGCACAGGGGATTCTTCACCACCAGCTCCACATACAGCGCACTGGTATTCATGACAACTTaGATCCCAGTGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WPSGHRGFFTTSSTYSALVFMTT*IPVGVS Trigger: CGAGACGCCCACTGGGATCAAAGTTGTCATGAATAC...CAGTGCGCTGTATGTGGAGCTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CAA 90 bp | TCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGGTGGCGAAAGAGCTCACTTaGCACAGTTTGGCCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSIRQGIKLERGPGVEVAKELT*HSLAQR Trigger: CCGCTGGGCCAAACTGTGCAAAGTGAGCTCTTTCGC...CACCTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
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| CDS-3UTR CAA 90 bp | GAGCTCACTTTGCACAGTTTGGCCCAGCGGGCACAGGGGATTCTTCACCACCAGCATCCTTCCTCCTCCTaGGGAATCCCTGCTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ELTLHSLAQRAQGILHHQHPSSS*GIPACF Trigger: GAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGATG...CTGGTGGTGAAGAATCCCCTGTGCCCGCTGGGCCAAACTGTGCAAAGTGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS-3UTR CAA 90 bp | GGGCAGAGAGCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GQRANIGVQSGAKELTLHLGNPC*LLAVPF Trigger: GAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAG...GTGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGCTCTCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAATTATACTCCTCCTCCTaGGGAATCCCTGCTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVGALSWHRFGRAPGRHELYSSS*GIPACF Trigger: GAAGCAAGCAGGGATTCCCAAGGAGGAGGAGTATAA...TTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000303731.9 ENST00000540486.5 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGGGGCCCTTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAAGTATTCATGACAACTTaGATCCCAGTGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TVGALSWHRFGRAPGRHEVFMTT*IPVGVS Trigger: CGAGACGCCCACTGGGATCAAAGTTGTCATGAATAC...TTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAAGGGCCCCCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR CAA 90 bp | GCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTGGTGTGGAGTCTAGCGGGGACATCTaGCTGACAAACGAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ASRSIRQGIKLERGPGVESSGDI*LTNERI Trigger: TATCCGCTCGTTTGTCAGCAAGATGTCCCCGCTAGA...CTCCACACCAGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303731.9 ENST00000540486.5 |
||
| CDS-3UTR CAA 90 bp | AGGGCAGAGAGCGAACATAGGAGTCCAGTCGGGAGCGAAAGAGCTCACTTTGCACATCCTTCCTCCTCCTaGGGAATCCCTGCTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RAESEHRSPVGSERAHFAHPSSS*GIPACF Trigger: GAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGATG...TGCAAAGTGAGCTCTTTCGCTCCCGACTGGACTCCTATGTTCGCTCTCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR CAA 90 bp | TTAGTTGGCACAGGTTCGGAAGGGCCCCAGGCAGACATGAATTCTCCTGAGACTCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGTGSEGPQADMNSPETLGNPC*LLAVPF Trigger: GAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAG...AGTCTCAGGAGAATTCATGTCTGCCTGGGGCCCTTCCGAACCTGTGCCAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 ENST00000575639.1 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGTGCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LFCASRSIRQGIKLERGPLGNPC*LLAVPF Trigger: GAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAG...AGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGCACAGAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571739.5 |
||
| CDS-3UTR CAA 90 bp | TTATTCTGTGCTTCTCGCAGCATTAGGCAGGGGATAAAACTGGAGAGAGGGCCTTCTAGCGGGGACATCTaGCTGACAAACGAGCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LFCASRSIRQGIKLERGPSSGDI*LTNERI Trigger: TATCCGCTCGTTTGTCAGCAAGATGTCCCCGCTAGA...AGGCCCTCTCTCCAGTTTTATCCCCTGCCTAATGCTGCGAGAAGCACAGAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000303731.9 ENST00000540486.5 |
||
| CDS-3UTR CAA 90 bp | GCCCAAGTCAGTATTCATGACAACTTTGATCCCAGTGGGCGTCTCGTAGTAATGGTATTCATGACAACTTaGATCCCAGTGGGCGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: AQVSIHDNFDPSGRLVVMVFMTT*IPVGVS Trigger: CGAGACGCCCACTGGGATCAAAGTTGTCATGAATAC...CATTACTACGAGACGCCCACTGGGATCAAAGTTGTCATGAATACTGACTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
||
| CDS CCA 72 bp | CTTGTCAGACTCCGCCTCCCTCCCTCAGCCAATCTGTaGCCACCGGAGCCGCGCACGCGCGGCCAGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVRLRLPPSANL*PPEPRTRGQAL Trigger: GAGCGCCTGGCCGCGCGTGCGCGGCTCCGGTGGCCACAGATTGGCTGAGGGAGGGAGGCGGAGTCTGACAAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572656.2 |
||
| CDS CCA 72 bp | GAGTGTGAGCCTCGCTCCGGGGCCGCCCCCACTCCTTaGGCTCGGGTTCCCGGACCCACAGCCTTCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: ECEPRSGAAPTP*ARVPGPTAFQP Trigger: TGGTTGGAAGGCTGTGGGTCCGGGAACCCGAGCCCAAGGAGTGGGGGCGGCCCCGGAGCGAGGCTCACACTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000303731.9 ENST00000573989.1 ENST00000575639.1 |
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| CDS GCA 72 bp | TCGCTCGGCCGCGGCTGGGCATTAACTCCGCTCCAGTaGTGCTTGTCAGACTCCGCCTCCCTCCCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLGRGWALTPLQ*CLSDSASLPQP Trigger: TGGCTGAGGGAGGGAGGCGGAGTCTGACAAGCAGCACTGGAGCGGAGTTAATGCCCAGCCGCGGCCGAGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572656.2 |
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| CDS GCA 72 bp | GCCAGGAAGCCATCCTTCCTCCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCATTCGCTGTAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: ARKPSFLLLGNP*LLLAVPFAVVQ Trigger: CTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGATGGCTTCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS CAA 72 bp | AGGAAGCCATCCTTCCTCCTCCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTCGCTGTAGTGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: RKPSFLLLGNPC*LLAVPFAVVQT Trigger: TGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGATGGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS CAA 90 bp | GATCCCAGTGGGCGTCTCGTAGTAATGGAGTTTGTAACGGCTAGTTaGGAAGGCCAGGAAGCCATCCTTCCTCCTCCTTGGGAATCCCTG | + |
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Preference number: 6 (lower is better) Translates to: DPSGRLVVMEFVTAS*EGQEAILPPPWESL Trigger: CAGGGATTCCCAAGGAGGAGGAAGGATGGCTTCCTGGCCTTCCAAACTAGCCGTTACAAACTCCATTACTACGAGACGCCCACTGGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS GCA 72 bp | ATCCTTCCTCCTCCTTGGGAATCCCTGCTTGCTTCTTaGGGTGCCATTCGCTGTAGTGCAGACACACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: ILPPPWESLLAS*GAIRCSADTLH Trigger: ATGGAGTGTGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000571739.5 ENST00000575639.1 |
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| CDS GCA 72 bp | TATACTCCTCCTCCTTGGGAATCCCTGCTTGCTTCTTaGGGTGCCATTCGCTGTAGTGCAGACACACTCCAT | + |
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Preference number: 6 (lower is better) Translates to: YTPPPWESLLAS*GAIRCSADTLH Trigger: ATGGAGTGTGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAGTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571947.5 ENST00000572656.2 ENST00000573989.1 |
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| CDS GCA 72 bp | GTACATCAGCTTATACTCCTCCTCCTTGGGAATCCCTaGTTGCTTCTTGCGGTGCCATTCGCTGTAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: VHQLILLLLGNP*LLLAVPFAVVQ Trigger: CTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAGTATAAGCTGATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571947.5 ENST00000572656.2 ENST00000573989.1 |
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| CDS CAA 72 bp | CATCAGCTTATACTCCTCCTCCTTGGGAATCCCTGCTaGCTTCTTGCGGTGCCATTCGCTGTAGTGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: HQLILLLLGNPC*LLAVPFAVVQT Trigger: TGTCTGCACTACAGCGAATGGCACCGCAAGAAGCAAGCAGGGATTCCCAAGGAGGAGGAGTATAAGCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000303731.9 ENST00000540486.5 ENST00000571947.5 ENST00000572656.2 ENST00000573989.1 |
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