RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000126602

Ensembl transcript IDs: ENST00000246957.10, ENST00000538171.5, ENST00000570403.1, ENST00000570514.5, ENST00000571011.1, ENST00000571538.5, ENST00000571804.5, ENST00000573872.5, ENST00000574175.1, ENST00000574494.1, ENST00000574941.5, ENST00000575671.5, ENST00000575707.5, ENST00000575854.5, ENST00000576335.5, ENST00000576788.1

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGC +
Preference number: 1 (lower is better)
Translates to: GFLLVLGGLRAEQSS*LQAPGWVSPGAQLG
Trigger: GCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 90 bp GGCGGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACA +
Preference number: 1 (lower is better)
Translates to: GGLRAEQSSCLQAPG*VSPGAQLGCGPPRT
Trigger: TGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR GCA 90 bp TCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTG +
Preference number: 1 (lower is better)
Translates to: SSLSSAVCVLNSRPA*KLQAGFRLGPNWAV
Trigger: CACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR TCA 90 bp ATCAGAGGAAGACATAGAGGCTCCAGACGGTTGAAGGCCCAACAGTaGTCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCAGGGCTG +
Preference number: 1 (lower is better)
Translates to: IRGRHRGSRRLKAQQ*SQTGPMSDQAPPGL
Trigger: CAGCCCTGGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAACCGTCTGGAGCCTCTATGTCTTCCTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR GCA 90 bp CTGCTGATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTaGGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTT +
Preference number: 1 (lower is better)
Translates to: LLIIECRGSSLSSAV*VLNSRPACKLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR GCA 90 bp CGGTTTCATGTCGGGCACGTAGAAGATGCTGCGGATGTTGAGCGGTaGGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGC +
Preference number: 1 (lower is better)
Translates to: RFHVGHVEDAADVER*VRLIVQGVAGLVVS
Trigger: GCTCACGACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGAAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR CCA 90 bp CGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTaGGGTCCATCATCCAGATGGCCTGGAAACGGAGATCGGCGGGGA +
Preference number: 1 (lower is better)
Translates to: RRSGRTPHVATHGHP*GPSSRWPGNGDRRG
Trigger: TCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR GCA 90 bp TTGGAAGTGGAACCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGT +
Preference number: 1 (lower is better)
Translates to: LEVEPCTLSVLLIIE*RGSSLSSAVCVLNS
Trigger: ACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGTTCCACTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR TCA 90 bp ACATGGACGGTTTCATGTCGGGCACGTAGAAGATGCTGCGGATGTTaGGCGGTGCGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGT +
Preference number: 1 (lower is better)
Translates to: TWTVSCRARRRCCGC*AVRPSYSAGCSGAC
Trigger: ACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGAAACCGTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR CCA 90 bp CATCCAGGAAGGCCTTTGACCCCGATCTGGCAATCGTCCCCAGGTTaGACACCAGCTCTTCCTGTGTCATCCCGATACCAGTATCCTGGA +
Preference number: 1 (lower is better)
Translates to: HPGRPLTPIWQSSPG*TPALPVSSRYQYPG
Trigger: TCCAGGATACTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR TCA 90 bp TGCCGAGCGGGAATAGACCTCCACTCTGTCAGCCACCATGAAAGCTaGGTAGAAACCCACTCCAAACTGGCCGATGATCTTGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: CRAGIDLHSVSHHES*VETHSKLADDLAAG
Trigger: GCCAGCAGCAAGATCATCGGCCAGTTTGGAGTGGGTTTCTACTCAGCTTTCATGGTGGCTGACAGAGTGGAGGTCTATTCCCGCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 90 bp CACTCGCCATTTGTACAAGCGAGGCCCAAGTTCCAGCCTTCCTTCTaGCAGGTAGAGGAAGCAGGGGCACTATGCCTGGGAGTTCCTTTA +
Preference number: 1 (lower is better)
Translates to: HSPFVQARPKFQPSF*QVEEAGALCLGVPL
Trigger: TAAAGGAACTCCCAGGCATAGTGCCCCTGCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTTGGGCCTCGCTTGTACAAATGGCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR CCA 90 bp TCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAATTaGTTTTCCTGTAATCTTAGCTACTCGCGAGACCAACGCACTAGA +
Preference number: 1 (lower is better)
Translates to: SPGAQLGCGPPRTQN*FSCNLSYSRDQRTR
Trigger: TCTAGTGCGTTGGTCTCGCGAGTAGCTAAGATTACAGGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570403.1
3UTR CCA 90 bp TACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTGTGCTG +
Preference number: 1 (lower is better)
Translates to: YRDRATMSKSFFVSA*NSCLEVEPCTLSVL
Trigger: CAGCACAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR TCA 90 bp GTATCCTGGATGGTGATGGTGCCTTTCTCGGCATTGGTCTGCAAGTaGATCTCCATTTCTGGCAGTGCTTGGCCGTCAGACACCAGTTTG +
Preference number: 1 (lower is better)
Translates to: VSWMVMVPFSALVCK*ISISGSAWPSDTSL
Trigger: CAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAATGCCGAGAAAGGCACCATCACCATCCAGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 90 bp TACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCAGTGACTCAG +
Preference number: 1 (lower is better)
Translates to: YRDRATMSKSFFVSA*NSCLEVELVVPVTQ
Trigger: CTGAGTCACTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR CCA 90 bp GATGGTGCCTTTCTCGGCATTGGTCTGCAAGTGAATCTCCATTTCTaGCAGTGCTTGGCCGTCAGACACCAGTTTGTGACGCAGTTTTTC +
Preference number: 1 (lower is better)
Translates to: DGAFLGIGLQVNLHF*QCLAVRHQFVTQFF
Trigger: GAAAAACTGCGTCACAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAATGCCGAGAAAGGCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR CCA 90 bp GTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGCGCCTGGGGCCCAACTaGGCTGTGGTCCTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: VVLPASSRLGFAWGPTGLRLGPN*AVVLRG
Trigger: TCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCG...CAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR GCA 90 bp CCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGWVSPGAQLGCGPPRTQAEQSS*LQAPGW
Trigger: CCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGC...CTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR GCA 90 bp CAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: QSSCLQAPGWVSPGAQLGNSRPA*KLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTT...GCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR GCA 90 bp TGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: CVLNSRPACKLQAGFRLGAEQSS*LQAPGW
Trigger: CCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGC...CCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp CTGATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGGCTGGGTTTCGCCTaGGGCCCAACTGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LIIECRGSSLSSAVCVLNRLGFA*GPTGLW
Trigger: CCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCT...GTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR GCA 90 bp CGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTTGGAAGTGGAACCCTaGACGCTCTCTGTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: RVQGFLLVLGGLRAEQSSLEVEP*TLSVLL
Trigger: CAGCAGCACAGAGAGCGTGCAGGGTTCCACTTCCAA...GGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp CCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCATCATCCAGATGGCCTaGAAACGGAGATCGGCGGGG +
Preference number: 2 (lower is better)
Translates to: PSYSAGCSGACREPARRSIIQMA*KRRSAG
Trigger: CCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGAT...GCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGCACTATAAGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR-3UTR CCA 90 bp CTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: LCAADNRVQGFLLVLGGLLQAPG*VSPGAQ
Trigger: TTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAG...CAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CAA 90 bp GGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGAACTCCTCATGTaGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATGGCCTG +
Preference number: 2 (lower is better)
Translates to: GLVVSLRDVAVELLM*PLTDILGVHHPDGL
Trigger: CAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGCAGGCTCACGACAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR-3UTR CCA 90 bp CGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCCCTGGAACTCATGTTTaGAAGTGGAACCCTGCACGC +
Preference number: 2 (lower is better)
Translates to: RVQGFLLVLGGLRAEQSSPGTHV*KWNPAR
Trigger: GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGG...GGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR TCA 90 bp TCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTGCGGCGGTCTGCGTGCTaGACAGTCGTCCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: SLSRPGTHVWKWNPARSLRRSAC*TVVLPA
Trigger: TGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCG...CAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp CTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGGTCCATCATCCAGATaGCCTGGAAACGGAGATCGG +
Preference number: 2 (lower is better)
Translates to: LIVQGVAGLVVSLRDVAVGPSSR*PGNGDR
Trigger: CCGATCTCCGTTTCCAGGCCATCTGGATGATGGACC...TACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGCACTATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR CAA 90 bp GCATCCAGGAAGGCCTTTGACCCCGATCTGGCAATCGTCCCCAGGTaGGACACCAGCTCTTCCTGTGTCATCCCGATACCAGTATCCTGG +
Preference number: 2 (lower is better)
Translates to: ASRKAFDPDLAIVPR*DTSSSCVIPIPVSW
Trigger: CCAGGATACTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR TCA 90 bp CCAGGAAGGCCTTTGACCCCGATCTGGCAATCGTCCCCAGGTTGGACACCAGCTCAGTATCCTGGATGGTaGTGGTGCCTTTCTCGGCAT +
Preference number: 2 (lower is better)
Translates to: PGRPLTPIWQSSPGWTPAQYPGW*WCLSRH
Trigger: ATGCCGAGAAAGGCACCATCACCATCCAGGATACTG...AGCTGGTGTCCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR CCA 90 bp TTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTCGCCTGGGGCCCAACTaGGCTGTGGTCCTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: FLSTGTGQQCPKASLSRPRLGPN*AVVLRG
Trigger: TCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCG...AGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR TCA 90 bp GAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACAACTTGTGGTCCCAGTaGCTCAGGGGGCTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: EYRDRATMSKSFFVSAWNNLWSQ*LRGLRW
Trigger: CCACCTCAGCCCCCTGAGTCACTGGGACCACAAGTT...GTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR-3UTR CCA 90 bp AGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAA +
Preference number: 2 (lower is better)
Translates to: RDRATMSKSFFVSAWNSCGPTGL*SSEDTE
Trigger: TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCC...ACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp AAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAA +
Preference number: 2 (lower is better)
Translates to: KSFFVSAWNSCLEVEPCTLQAPG*VSPGAQ
Trigger: TTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAG...CGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp GGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAA +
Preference number: 2 (lower is better)
Translates to: GPGNNVQKLLCLGLELMFGPTGL*SSEDTE
Trigger: TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCC...AAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp TCTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGAGGCTGGGTTTCGCCTaGGGCCCAACTGGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SFSEYRDRATMSKSFFVSRLGFA*GPTGLW
Trigger: CCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCT...CGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR TCA 90 bp GCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACTTGAAGGCCCAACAGTaGTCCCAGACGGGCCCCATG +
Preference number: 2 (lower is better)
Translates to: ACVYTEFAGGCYMAALTDLKAQQ*SQTGPM
Trigger: CATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAA...GTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR-3UTR GCA 90 bp AGTGTGAGAGAAATGCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGCCTCCAGGGCTGTGCTaGCCTCACCAAAGCCCGTCC +
Preference number: 2 (lower is better)
Translates to: SVREMHVYTLSLQVAVTWPPGLC*PHQSPS
Trigger: GGACGGGCTTTGGTGAGGGCAGCACAGCCCTGGAGG...CCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGCATTTCTCTCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR-3UTR GCA 90 bp AGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: SFFVSAWNSCLEVEPCTLLLIIE*RGSSLS
Trigger: GGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG...GAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CAA 90 bp GCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTaGGAAGTGGAACTTGTGGTCCCAGTGACTCAGGGGGCTGAGGTG +
Preference number: 2 (lower is better)
Translates to: ATMSKSFFVSAWNSC*EVELVVPVTQGAEV
Trigger: CACCTCAGCCCCCTGAGTCACTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR-3UTR TCA 90 bp CAGTGCTTGGCCGTCAGACACCAGTTTGTGACGCAGTTTTTCCAAGGCATCGCTAAACACCTCTTTTTCTaGGTACAGGGACCGGGCAAC +
Preference number: 2 (lower is better)
Translates to: QCLAVRHQFVTQFFQGIAKHLFF*VQGPGN
Trigger: GTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTT...AGCGATGCCTTGGAAAAACTGCGTCACAAACTGGTGTCTGACGGCCAAGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR TCA 90 bp ACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACACAGACAGAAAAGAGGCTCCAGACGGTTaGAGGCCCAACAGTGATCCC +
Preference number: 2 (lower is better)
Translates to: TEFAGGCYMAALTDTDRKEAPDG*RPNSDP
Trigger: GGGATCACTGTTGGGCCTTCAACCGTCTGGAGCCTC...TTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR-3UTR CCA 90 bp GCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACTGGGGCTGTCATCTGTaGTGTCAGTCCTTCTGGCCC +
Preference number: 2 (lower is better)
Translates to: ACVYTEFAGGCYMAALTDWGCHL*CQSFWP
Trigger: GGGCCAGAAGGACTGACACCACAGATGACAGCCCCA...GTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR CAA 90 bp CTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGC +
Preference number: 2 (lower is better)
Translates to: LFLSTGTGQQCPKAS*SRPGTHVWKWNPAR
Trigger: GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR GCA 90 bp ATCAGCTCCCGTATAAACACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: ISSRINTSFSEYRDRATMNSRPA*KLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTT...CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR GCA 90 bp GTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: VQKLLCLGLELMFGSGTLLLIIE*RGSSLS
Trigger: GGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG...CAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp AAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCACTCATGTTTGGAAGTaGAACCCTGCACGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: KASLSRPGTHVWKWNPARTHVWK*NPARSL
Trigger: CAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGT...GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CCA 90 bp CTGGATGGTGATGGTGCCTTTCTCGGCATTGGTCTGCAAGTGAATCTCCATTTCACTCATGTTTGGAAGTaGAACCCTGCACGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: LDGDGAFLGIGLQVNLHFTHVWK*NPARSL
Trigger: CAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGT...GAAATGGAGATTCACTTGCAGACCAATGCCGAGAAAGGCACCATCACCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CAA 90 bp CTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: LFLSTGTGQQCPKAS*SRPGTHVWKWNLWS
Trigger: GGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR-3UTR CCA 90 bp AAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: KASLSRPGTHVWKWNPARFFVSA*NSCLEV
Trigger: CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA...GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CAA 90 bp GCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATaGACTGACACAGACAGAAAAGAGATCCACGAGGGAGAAGTGAGA +
Preference number: 2 (lower is better)
Translates to: ACVYTEFAGGCYMAA*TDTDRKEIHEGEVR
Trigger: TCTCACTTCTCCCTCGTGGATCTCTTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR-3UTR CCA 90 bp ACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TSFSEYRDRATMSKSFFVFFVSA*NSCLEV
Trigger: CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA...GACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
3UTR GCA 72 bp TCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAAC +
Preference number: 3 (lower is better)
Translates to: SSAVCVLNSRPA*KLQAGFRLGPN
Trigger: GTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR GCA 72 bp CTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCC +
Preference number: 3 (lower is better)
Translates to: LVLGGLRAEQSS*LQAPGWVSPGA
Trigger: GGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 72 bp GTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTaGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACA +
Preference number: 3 (lower is better)
Translates to: VVLPASSRLGFA*GPTGLWSSEDT
Trigger: TGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR-3UTR CAA 90 bp TGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGTGCAGGGGTTCCTCCTaGTCCTCGGCGGTCTGCGTG +
Preference number: 3 (lower is better)
Translates to: CVLNSRPACKLQAGFRLGCRGSS*SSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCA...CCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR TCA 72 bp CCTCCAGGGCTGTGCTGCCCTCACCAAAGCCCGTCCTaGGGGCAGCCACACAGCAGGCAGCACTCGCCATTT +
Preference number: 3 (lower is better)
Translates to: PPGLCCPHQSPS*GQPHSRQHSPF
Trigger: AAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTCAGGACGGGCTTTGGTGAGGGCAGCACAGCCCTGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR TCA 72 bp GCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTaGACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: AGVPPCPRRSAC*TVVLPASSRLG
Trigger: ACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 72 bp CGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: RAEQSSCLQAPG*VSPGAQLGCGP
Trigger: AGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 72 bp GCCACTCACGGACATCCTTGGGGTCCATCATCCAGATaGCCTGGAAACGGAGATCGGCGGGGAGGGCGTCGT +
Preference number: 3 (lower is better)
Translates to: ATHGHPWGPSSR*PGNGDRRGGRR
Trigger: ACGACGCCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR GCA 72 bp ATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTaGGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAG +
Preference number: 3 (lower is better)
Translates to: IECRGSSLSSAV*VLNSRPACKLQ
Trigger: CTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR GCA 72 bp GAACCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTG +
Preference number: 3 (lower is better)
Translates to: EPCTLSVLLIIE*RGSSLSSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR TCA 72 bp AGACATAGAGGCTCCAGACGGTTGAAGGCCCAACAGTaGTCCCAGACGGGCCCCATGTCAGACCAGGCTCCT +
Preference number: 3 (lower is better)
Translates to: RHRGSRRLKAQQ*SQTGPMSDQAP
Trigger: AGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAACCGTCTGGAGCCTCTATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR GCA 72 bp GTCGGGCACGTAGAAGATGCTGCGGATGTTGAGCGGTaGGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTT +
Preference number: 3 (lower is better)
Translates to: VGHVEDAADVER*VRLIVQGVAGL
Trigger: AAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR-3UTR CAA 90 bp AAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGATGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCAT +
Preference number: 3 (lower is better)
Translates to: KLQAGFRLGPNWAVVLRGCPKAS*SRPGTH
Trigger: ATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACA...TCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 72 bp TCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAATTGGTTTTCAATGCA +
Preference number: 3 (lower is better)
Translates to: SRLGFAWGPTGL*SSEDTELVFNA
Trigger: TGCATTGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 72 bp AGGCCTTTGACCCCGATCTGGCAATCGTCCCCAGGTTaGACACCAGCTCTTCCTGTGTCATCCCGATACCAG +
Preference number: 3 (lower is better)
Translates to: RPLTPIWQSSPG*TPALPVSSRYQ
Trigger: CTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR CAA 90 bp CTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGTTCAGTGAGCTGAAATaGCATCTCTGCACTCGAGCC +
Preference number: 3 (lower is better)
Translates to: LCAADNRVQGFLLVLGGLFSELK*HLCTRA
Trigger: GGCTCGAGTGCAGAGATGCAATTTCAGCTCACTGAA...CAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
3UTR TCA 72 bp GTTTCATGTCGGGCACGTAGAAGATGCTGCGGATGTTaGGCGGTGCGTCCGTCTTATAGTGCAGGGTGTAGC +
Preference number: 3 (lower is better)
Translates to: VSCRARRRCCGC*AVRPSYSAGCS
Trigger: GCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR TCA 72 bp AATCTATCAGAGGAAGACATAGAGGCTCCAGACGGTTaGAGGCCCAACAGTGATCCCAGACGGGCCCCATGT +
Preference number: 3 (lower is better)
Translates to: NLSEEDIEAPDG*RPNSDPRRAPC
Trigger: ACATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAACCGTCTGGAGCCTCTATGTCTTCCTCTGATAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR TCA 72 bp CTGACACAGACAGAAAAGAGATCCACGAGGGAGAAGTaGGAGTGCTGGAGACTCCACAAGCCACAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: LTQTEKRSTREK*ECWRLHKPQAA
Trigger: TGCAGCCTGTGGCTTGTGGAGTCTCCAGCACTCTCACTTCTCCCTCGTGGATCTCTTTTCTGTCTGTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR CCA 72 bp GGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTaGGGTCCATCATCCAGATGGCCTGGAAACGGAGAT +
Preference number: 3 (lower is better)
Translates to: GRTPHVATHGHP*GPSSRWPGNGD
Trigger: ATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR TCA 72 bp ATTTCTGGCAGTGCTTGGCCGTCAGACACCAGTTTGTaGCGCAGTTTTTCCAAGGCATCGCTGGCATTGGAG +
Preference number: 3 (lower is better)
Translates to: ISGSAWPSDTSL*RSFSKASLALE
Trigger: CTCCAATGCCAGCGATGCCTTGGAAAAACTGCGTCACAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR TCA 72 bp ATGGTGATGGTGCCTTTCTCGGCATTGGTCTGCAAGTaGATCTCCATTTCTGGCAGTGCTTGGCCGTCAGAC +
Preference number: 3 (lower is better)
Translates to: MVMVPFSALVCK*ISISGSAWPSD
Trigger: GTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAATGCCGAGAAAGGCACCATCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 72 bp CGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACCCTGCACGCTC +
Preference number: 3 (lower is better)
Translates to: RATMSKSFFVSA*NSCLEVEPCTL
Trigger: GAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
3UTR CCA 72 bp GCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAATTaGTTTTCCTGTAATCTTAGCTACTCGCGAGACCAA +
Preference number: 3 (lower is better)
Translates to: AQLGCGPPRTQN*FSCNLSYSRDQ
Trigger: TTGGTCTCGCGAGTAGCTAAGATTACAGGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
3UTR-3UTR CAA 90 bp GTGACGCAGTTTTTCCAAGGCATCGCTGGCATTGGAGATCAGCTCCCGTATAAAGCCTGGAACTCATGTTaGGAAGTGGAACCCTGCACG +
Preference number: 3 (lower is better)
Translates to: VTQFFQGIAGIGDQLPYKAWNSC*EVEPCT
Trigger: CGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGC...TTTATACGGGAGCTGATCTCCAATGCCAGCGATGCCTTGGAAAAACTGCGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 72 bp TTTCTCGGCATTGGTCTGCAAGTGAATCTCCATTTCTaGCAGTGCTTGGCCGTCAGACACCAGTTTGTGACG +
Preference number: 3 (lower is better)
Translates to: FLGIGLQVNLHF*QCLAVRHQFVT
Trigger: CGTCACAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAGATTCACTTGCAGACCAATGCCGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR TCA 72 bp GGAATAGACCTCCACTCTGTCAGCCACCATGAAAGCTaGGTAGAAACCCACTCCAAACTGGCCGATGATCTT +
Preference number: 3 (lower is better)
Translates to: GIDLHSVSHHES*VETHSKLADDL
Trigger: AAGATCATCGGCCAGTTTGGAGTGGGTTTCTACTCAGCTTTCATGGTGGCTGACAGAGTGGAGGTCTATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR CCA 72 bp CGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: RATMSKSFFVSA*NSCLEVELVVP
Trigger: TGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR-3UTR CAA 90 bp ATCAGCTCCCGTATAAACACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGGCCTGGAACTCATGTTaGGAAGTGGAACTTGTGGTC +
Preference number: 3 (lower is better)
Translates to: ISSRINTSFSEYRDRATMAWNSC*EVELVV
Trigger: GACCACAAGTTCCACTTCCAAACATGAGTTCCAGGC...CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR-3UTR CAA 90 bp CAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGTCCGAGGACACAGAATaGGTTTTCAATGCAGTTTTG +
Preference number: 3 (lower is better)
Translates to: QQCPKASLSRPGTHVWKWSEDTE*VFNAVL
Trigger: CAAAACTGCATTGAAAACCAATTCTGTGTCCTCGGA...CCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571804.5
3UTR-3UTR CAA 90 bp CAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACACGACTAATGCAGTTTaGATGTGGGGACACTTCATA +
Preference number: 3 (lower is better)
Translates to: QCPKASLSRPGTHVWKWNTTNAV*MWGHFI
Trigger: TATGAAGTGTCCCCACATCAAAACTGCATTAGTCGT...GTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS-3UTR GCA 90 bp CTCCAGGGCTGTGCTGCCCTCACCAAAGCCCGTCCTGAGGGCAGCCACACAGCAGCTCCTCCAGGGCTGTaGTGCCCTCACCAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LQGCAALTKARPEGSHTAAPPGL*CPHQSP
Trigger: CGGGCTTTGGTGAGGGCAGCACAGCCCTGGAGGAGC...TGCTGTGTGGCTGCCCTCAGGACGGGCTTTGGTGAGGGCAGCACAGCCCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CCA 90 bp AGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSRLGFAWGPTGLWSSEDLQAPG*VSPGAQ
Trigger: TTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAG...GTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR TCA 90 bp TGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCGGCGGTCTGCGTGCTaGACAGTCGTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CVLNSRPACKLQAGFRLGRRSAC*TVVLPA
Trigger: TGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCG...CCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR TCA 90 bp CGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCCGGCGGTCTGCGTGCTaGACAGTCGTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RVQGFLLVLGGLRAEQSSRRSAC*TVVLPA
Trigger: TGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCG...GGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR TCA 90 bp GTGATCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCAGGGCTGTGCTGCCCTTGAAGGCCCAACAGTaGTCCCAGACGGGCCCCATG +
Preference number: 4 (lower is better)
Translates to: VIPDGPHVRPGSSRAVLPLKAQQ*SQTGPM
Trigger: CATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAA...GGGCAGCACAGCCCTGGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp TGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGAACTCCTCATGTTACCACCGTGCAGGCCTaGGCCAGTGCAGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSGACREPARRSGRTPHVTTVQA*ASAAPG
Trigger: GCCAGGCGCTGCACTGGCTCAGGCCTGCACGGTGGT...AACATGAGGAGTTCTACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp CCCGTCCTGAGGGCAGCCACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGCACCAAAGCCCGTCCTaGGGGCAGCCACACAGCAGG +
Preference number: 4 (lower is better)
Translates to: PVLRAATQQAALAICTSEHQSPS*GQPHSR
Trigger: CCTGCTGTGTGGCTGCCCTCAGGACGGGCTTTGGTG...CTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTCAGGACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp TCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSCLQAPGWVSPGAQLGCAEQSS*LQAPGW
Trigger: CCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGC...ACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp CGTCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGCACCCGGGCCTCGCTaGAAAACTCCTTGCAGTCGG +
Preference number: 4 (lower is better)
Translates to: RLIVQGVAGLVVSLRDVAAPGPR*KTPCSR
Trigger: CCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGC...CGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGCACTATAAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp GTTGAAGGCCCAACAGTGATCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCGAGGCTCCAGACGGTTaGAGGCCCAACAGTGATCCC +
Preference number: 4 (lower is better)
Translates to: VEGPTVIPDGPHVRPGSSEAPDG*RPNSDP
Trigger: GGGATCACTGTTGGGCCTTCAACCGTCTGGAGCCTC...GGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCACTGTTGGGCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp ACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGTTGGAAGTGGAACCCTaGACGCTCTCTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVVLPASSRLGFAWGPTGLEVEP*TLSVLL
Trigger: CAGCAGCACAGAGAGCGTGCAGGGTTCCACTTCCAA...CCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GCGCGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTTGCAGCGCCTGGCCCTaGACAGGCTCCTGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ARRSGRTPHVATHGHPWGCSAWP*TGSCKV
Trigger: CACCTTGCAGGAGCCTGTCCAGGGCCAGGCGCTGCA...ACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp CGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCAAGCCAGTGCAGCGCCTaGCCCTGGACAGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRSGRTPHVATHGHPWGPSQCSA*PWTGSC
Trigger: GCAGGAGCCTGTCCAGGGCCAGGCGCTGCACTGGCT...TGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp AGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACAAACACCTCTTTTTCTaGGTACAGGGACCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSRLGFAWGPTGLWSSEDKHLFF*VQGPGN
Trigger: GTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTT...GTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR TCA 90 bp AACAGTGATCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCAGGGCTGTGCTGTCGCTCCAGGGCCTTaGCAAGCAGCTCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: NSDPRRAPCQTRLLQGCAVAPGP*QAAHSS
Trigger: GCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGAC...AGCACAGCCCTGGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp GCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGAACTCCTGCGGATGTTGAGCGGTaGGTCCGTCTTATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: AGCSGACREPARRSGRTPADVER*VRLIVQ
Trigger: CTGCACTATAAGACGGACGCACCGCTCAACATCCGC...AGGAGTTCTACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR GCA 90 bp AGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGAACTCCCTGGACAGGCTCCTaGAAGGTGTTCATCCGCCTT +
Preference number: 4 (lower is better)
Translates to: SAGCSGACREPARRSGRTPWTGS*KVFIRL
Trigger: AAGGCGGATGAACACCTTGCAGGAGCCTGTCCAGGG...AGTTCTACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp GGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAATTGGTTGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: GFAWGPTGLWSSEDTELVGPTGL*SSEDTE
Trigger: TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCC...AACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp CCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGACTCATGTTTGGAAGTaGAACCCTGCACGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGWVSPGAQLGCGPPRTQTHVWK*NPARSL
Trigger: CAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGT...CTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp ACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCCTGGAACTCATGTTTaGAAGTGGAACCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: TVVLPASSRLGFAWGPTGPGTHV*KWNPAR
Trigger: GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGG...CCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GATCCACGAGGGAGAAGTGAGAGTGCTGGAGACTCCACAAGCCACAGGCTGCAGGTCCTTCTGGCCCCCTaGCTGTCAGTGTCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPRGRSESAGDSTSHRLQVLLAP*LSVSLQ
Trigger: CTGGAGCGACACTGACAGCCAGGGGGCCAGAAGGAC...CTGCAGCCTGTGGCTTGTGGAGTCTCCAGCACTCTCACTTCTCCCTCGTGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp GGGCAGCCACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGGCCCAAGTTCTCCACGAGGGAGAAGTaGGAGTGCTGGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: GQPHSRQHSPFVQARPKFSTREK*ECWRLH
Trigger: GTGGAGTCTCCAGCACTCTCACTTCTCCCTCGTGGA...GAACTTGGGCCTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp CTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCACGCACTAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LLVLGGLRAEQSSCLQAPRTRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTAGTGCG...TGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS-3UTR GCA 90 bp TTGTCCTCGGCGGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LSSAVCVLNSRPACKLQANSRPA*KLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTT...AGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCGAGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR GCA 90 bp GTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCAGGCTCCCCGGGGCTaGCGAGCGGGAATAGACCTC +
Preference number: 4 (lower is better)
Translates to: VAVELLMLPLTDILGVHHQAPRG*RAGIDL
Trigger: GAGGTCTATTCCCGCTCGGCAGCCCCGGGGAGCCTG...ATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp ATCTTAGCTACTCGCGAGACCAACGCACTAGAATCGCTTGAACCTGGGAGGCAGCGCCTGGGGCCCAACTaGGCTGTGGTCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: ILATRETNALESLEPGRQRLGPN*AVVLRG
Trigger: TCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCG...CTGCCTCCCAGGTTCAAGCGATTCTAGTGCGTTGGTCTCGCGAGTAGCTAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS-3UTR CCA 90 bp GCGGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCCTGGAACTCATGTTTaGAAGTGGAACCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: AVCVLNSRPACKLQAGFRPGTHV*KWNPAR
Trigger: GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGG...GCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTAGAACTCCTACTCACGGACATCCTTaGGGTCCATCATCCAGATGG +
Preference number: 4 (lower is better)
Translates to: AGCSGACREPARRSGRTPTHGHP*GPSSRW
Trigger: CCATCTGGATGATGGACCCCAAGGATGTCCGTGAGT...AGGAGTTCTACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp ATCCTTGGGGTCCATCATCCAGATGGCCTGGAAACGGAGATCGGCGGGGAGGGCGGTCCATCATCCAGATaGCCTGGAAACGGAGATCGG +
Preference number: 4 (lower is better)
Translates to: ILGVHHPDGLETEIGGEGGPSSR*PGNGDR
Trigger: CCGATCTCCGTTTCCAGGCCATCTGGATGATGGACC...GCCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
3UTR CAA 72 bp CCTGAGGGCAGCCACACAGCAGGCAGCACTCGCCATTaGTACAAGCGAGGCCCAAGTTCCAGCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PEGSHTAGSTRH*YKRGPSSSLPS
Trigger: AGAAGGAAGGCTGGAACTTGGGCCTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp GTGATCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCAGGGCTGTGCTGCCCGTTACATGGCAGCATTaGCTGACACAGACAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VIPDGPHVRPGSSRAVLPVTWQH*LTQTEK
Trigger: CTTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAAC...GGGCAGCACAGCCCTGGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp GATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTTGTCCTCGGCGGTCTaGGTGCTGAACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: DNRVQGFLLVLGGLRAEQLSSAV*VLNSRP
Trigger: AGGACGACTGTTCAGCACGCAGACCGCCGAGGACAA...CTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR GCA 90 bp ATTTGTACAAGCGAGGCCCAAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCCCTCCAGGGCTGTGCTaGCCTCACCAAAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ICTSEAQVPAFLLAGRGSPPGLC*PHQSPS
Trigger: GGACGGGCTTTGGTGAGGGCAGCACAGCCCTGGAGG...GCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTTGGGCCTCGCTTGTACAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp CACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGGCCCAAGTTCCAGCCTTCCACAAGCCACAGGCTaGAGGGGCAGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HTAGSTRHLYKRGPSSSLPQATG*RGRMAS
Trigger: AGAAGCCATCCTGCCCCTGCAGCCTGTGGCTTGTGG...AAGGCTGGAACTTGGGCCTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CCA 90 bp AAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCAGGGGCACTATGCCTGGGACCACCTTCCACACTGTaGGAAGAGGGTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KFQPSFWQVEEAGALCLGPPSTL*EEGAQG
Trigger: TCCCTGGGCACCCTCTTCCCACAGTGTGGAAGGTGG...TCCCAGGCATAGTGCCCCTGCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp CATCCTTGGGGTCCATCATCCAGATGGCCTGGAAACGGAGATCGGCGGGGAGGGAGTACAAGGGGAAGCTaGCGAAGTTGCTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: HPWGPSSRWPGNGDRRGGSTRGS*RSCCTS
Trigger: CGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACT...CCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp CTCCAGGGCTGTGCTGCCCTCACCAAAGCCCGTCCTGAGGGCAGCCACACAGCATGCATGTGTATACACTaGGTTTGCAGGTGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LQGCAALTKARPEGSHTACMCIH*VCRWLL
Trigger: TAACAGCCACCTGCAAACTCAGTGTATACACATGCA...TGCTGTGTGGCTGCCCTCAGGACGGGCTTTGGTGAGGGCAGCACAGCCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp GCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCAGTGACTCAGGGGGCTGCTGAACAGTCGTCCTaGCTGCAAGCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AWNSCLEVELVVPVTQGAAEQSS*LQAPGW
Trigger: CCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGC...AGCCCCCTGAGTCACTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR GCA 90 bp CACGCTCTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCCTCCATTTCTGGCAGTaGTTGGCCGTCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: HALCAADNRVQGFLLVLGLHFWQ*LAVRHQ
Trigger: CTGGTGTCTGACGGCCAAGCACTGCCAGAAATGGAG...GCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR GCA 90 bp GAGCGGTGCGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCTGGAAAACTCCTTaGAGTCGGATTTCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ERCVRLIVQGVAGLVVSLRWKTP*SRISGG
Trigger: TCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCG...CAGGCTCACGACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR GCA 90 bp GCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCAGTGACTCAGGGGGCTTACAGCACTCGGCCCTaGACGCTCTCTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AWNSCLEVELVVPVTQGAYSTRP*TLSVLL
Trigger: CAGCAGCACAGAGAGCGTGCAGGGCCGAGTGCTGTA...AGCCCCCTGAGTCACTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR CCA 90 bp AGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTAGGCTGGGTTTCGCCTaGGGCCCAACTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RDRATMSKSFFVSAWNSCRLGFA*GPTGLW
Trigger: CCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCT...ACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR CCA 90 bp CAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QGPGNNVQKLLCLGLELMLQAPG*VSPGAQ
Trigger: TTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAG...CATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR CCA 90 bp AAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGATTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: KLQAGFRLGPNWAVVLRGFFVSA*NSCLEV
Trigger: CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA...TCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp AAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCAGGGGCACTATGCCTGGGATGGGGCTGTCATCTGTaGTGTCAGTCCTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KFQPSFWQVEEAGALCLGWGCHL*CQSFWP
Trigger: GGGCCAGAAGGACTGACACCACAGATGACAGCCCCA...TCCCAGGCATAGTGCCCCTGCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR CAA 72 bp GTGAGCCTGCGCGACGTAGCGGTAGAACTCCTCATGTaGCCACTCACGGACATCCTTGGGGTCCATCATCCA +
Preference number: 4 (lower is better)
Translates to: VSLRDVAVELLM*PLTDILGVHHP
Trigger: TGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGCAGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp GGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTCGGCGGTCTGCGTGCTaGACAGTCGTCCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPGNNVQKLLCLGLELMFRRSAC*TVVLPA
Trigger: TGCAGGCAGGACGACTGTTCAGCACGCAGACCGCCG...AAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR TCA 90 bp GGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTTCAGACACCAGTTTGTaGCGCAGTTTTTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GLRAEQSSCLQAPGWVSPSDTSL*RSFSKA
Trigger: TGCCTTGGAAAAACTGCGTCACAAACTGGTGTCTGA...AGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR GCA 90 bp AGAGCATCCAGGAAGGCCTTTGACCCCGATCTGGCAATCGTCCCCAGGTTGGACCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RASRKAFDPDLAIVPRLDLLIIE*RGSSLS
Trigger: GGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG...GTCCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp AGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: SFFVSAWNSCLEVEPCTLGPTGL*SSEDTE
Trigger: TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCC...GAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAATTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GWVSPGAQLGCGPPRTQNFFVSA*NSCLEV
Trigger: CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA...ATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GAAGTGGAACCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCCAATCGTCCCCAGGTTaGACACCAGCTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EVEPCTLSVLLIIECRGSQSSPG*TPALPV
Trigger: CACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTG...GGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGTTCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR GCA 90 bp TCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGTTGTCCTCGGCGGTCTaGGTGCTGAACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SEYRDRATMSKSFFVSAWLSSAV*VLNSRP
Trigger: AGGACGACTGTTCAGCACGCAGACCGCCGAGGACAA...CCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR GCA 90 bp AATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCAGGCTCCCCGGGGCTaGCGAGCGGGAATAGACCTC +
Preference number: 4 (lower is better)
Translates to: NVQKLLCLGLELMFGSGTQAPRG*RAGIDL
Trigger: GAGGTCTATTCCCGCTCGGCAGCCCCGGGGAGCCTG...GGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR GCA 90 bp GTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATTCTTCTCCACCACCGTaGAGGCCTGAGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VELLMLPLTDILGVHHPDSSPPP*RPEPVQ
Trigger: CTGCACTGGCTCAGGCCTGCACGGTGGTGGAGAAGA...ATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp GTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAATTGGTTTAAACCCACTCCAAACTaGCCGATGATCTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSPGAQLGCGPPRTQNWFKPTPN*PMILLL
Trigger: CAGCAGCAAGATCATCGGCCAGTTTGGAGTGGGTTT...AAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp GCGGTCTGCGTGCTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCCGAGGACACAGAATTaGTTTTCCTGTAATCTTAGC +
Preference number: 4 (lower is better)
Translates to: AVCVLNSRPACKLQAGFRPRTQN*FSCNLS
Trigger: GCTAAGATTACAGGAAAACCAATTCTGTGTCCTCGG...GCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAGCACGCAGACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS-3UTR TCA 90 bp GTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATAGATGCTGCGGATGTTaGGCGGTGCGTCCGTCTTAT +
Preference number: 4 (lower is better)
Translates to: VAVELLMLPLTDILGVHHRCCGC*AVRPSY
Trigger: ATAAGACGGACGCACCGCTCAACATCCGCAGCATCT...ATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp GAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACGGCTTCAGTGAGCCATaGTTGCACTACAGCACTCGG +
Preference number: 4 (lower is better)
Translates to: EYRDRATMSKSFFVSAWNGFSEP*LHYSTR
Trigger: CCGAGTGCTGTAGTGCAATCATGGCTCACTGAAGCC...GTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR GCA 90 bp TCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SEYRDRATMSKSFFVSAWNSRPA*KLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTT...CCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR GCA 90 bp CAATCGTCCCCAGGTTGGACACCAGCTCTTCCTGTGTCATCCCGATACCAGTATTTGGAAGTGGAACCCTaGACGCTCTCTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSPGWTPALPVSSRYQYLEVEP*TLSVLL
Trigger: CAGCAGCACAGAGAGCGTGCAGGGTTCCACTTCCAA...ATACTGGTATCGGGATGACACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp GCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCAGCCGAGGACACAGAATTaGTTTTCCTCCCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: ASLSRPGTHVWKWNLWSQPRTQN*FSSRHG
Trigger: GCCGTGCCGGGAGGAAAACCAATTCTGTGTCCTCGG...CTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR CCA 90 bp AATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCAGGCTGGGTTTCGCCTaGGGCCCAACTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NVQKLLCLGLELMFGSGTRLGFA*GPTGLW
Trigger: CCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCT...GGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp ATCAGCTCCCGTATAAACACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGCTGCAAGCTCCAGGCTaGGTTTCGCCTGGGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ISSRINTSFSEYRDRATMLQAPG*VSPGAQ
Trigger: TTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAG...CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571011.1
ENST00000571804.5
CDS-3UTR CCA 90 bp ATTTGTACAAGCGAGGCCCAAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCCCACCCCAGCAGACCTaGCAGTGTGAGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: ICTSEAQVPAFLLAGRGSPPQQT*QCERNA
Trigger: TGCATTTCTCTCACACTGCCAGGTCTGCTGGGGTGG...GCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTTGGGCCTCGCTTGTACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp GCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACCAGGCCAGGCTCGCTTaGGCGCAGCTGATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ACVYTEFAGGCYMAALTDQARLA*AQLIQL
Trigger: AAGCTGAATCAGCTGCGCGCAAGCGAGCCTGGCCTG...GTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CCA 90 bp AAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCCGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: KASLSRPGTHVWKWNLWSGPTGL*SSEDTE
Trigger: TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCC...GGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR TCA 90 bp AGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTCAGTATCCTGGATGGTaGTGGTGCCTTTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RDRATMSKSFFVSAWNSCQYPGW*WCLSRH
Trigger: ATGCCGAGAAAGGCACCATCACCATCCAGGATACTG...ACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR TCA 90 bp GTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATCACTCCAGAACCATCTaGAAGCCACTGGTAACCCAG +
Preference number: 4 (lower is better)
Translates to: VELLMLPLTDILGVHHPDHSRTI*KPLVTQ
Trigger: CTGGGTTACCAGTGGCTTTCAGATGGTTCTGGAGTG...ATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR TCA 90 bp GGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTAACTTGTGGTCCCAGTaGCTCAGGGGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GNNVQKLLCLGLELMFGSNLWSQ*LRGLRW
Trigger: CCACCTCAGCCCCCTGAGTCACTGGGACCACAAGTT...ACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR GCA 90 bp AGCTCCCGTATAAACACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAACAGTCGTCCTGCCTaGAAGCTCCAGGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SSRINTSFSEYRDRATMSNSRPA*KLQAGF
Trigger: AAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTT...GGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571011.1
ENST00000571804.5
CDS-3UTR TCA 90 bp GAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACGCATTGGTCTGCAAGTaGATCTCCATTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: EYRDRATMSKSFFVSAWNALVCK*ISISGS
Trigger: ACTGCCAGAAATGGAGATTCACTTGCAGACCAATGC...GTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR TCA 90 bp ATCAGCTCCCGTATAAACACCTCTTTTTCTGAGTACAGGGACCGGGCAACAATGATCCAGGAAGGCCTTTaGCCCCGATCTGGCAATCGT +
Preference number: 4 (lower is better)
Translates to: ISSRINTSFSEYRDRATMIQEGL*PRSGNR
Trigger: ACGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGAT...CATTGTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTTATACGGGAGCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR TCA 90 bp GCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGCTCCAAACTGGCCGATaGTCTTGCTGCTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ATMSKSFFVSAWNSCLEVLQTGR*SCCWPQ
Trigger: CTGAGGCCAGCAGCAAGATCATCGGCCAGTTTGGAG...CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR GCA 90 bp CAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACTTGTCCTCGGCGGTCTaGGTGCTGAACAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QCPKASLSRPGTHVWKWNLSSAV*VLNSRP
Trigger: AGGACGACTGTTCAGCACGCAGACCGCCGAGGACAA...GTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR GCA 90 bp AGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACTTGTGGTCCCACTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SFFVSAWNSCLEVELVVPLLIIE*RGSSLS
Trigger: GGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG...TGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR CCA 90 bp AAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCCCGATACCAGTATCCTaGATGGTGATGGTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KASLSRPGTHVWKWNPARPIPVS*MVMVPF
Trigger: GAAAGGCACCATCACCATCCAGGATACTGGTATCGG...GCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp GGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTCCTTTGACCCCGATCTaGCAATCGTCCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GNNVQKLLCLGLELMFGSPLTPI*QSSPGW
Trigger: CCAACCTGGGGACGATTGCCAGATCGGGGTCAAAGG...ACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp GAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATGGCCAGTCGGATTTCAGGTaGATGATGATTTTTGTCCCG +
Preference number: 4 (lower is better)
Translates to: ELLMLPLTDILGVHHPDGQSDFR*MMIFVP
Trigger: CGGGACAAAAATCATCATCCACCTGAAATCCGACTG...GCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CCA 90 bp GAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACCCTGGAACTCATGTTTaGAAGTGGAACTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: EYRDRATMSKSFFVSAWNPGTHV*KWNLWS
Trigger: GGACCACAAGTTCCACTTCCAAACATGAGTTCCAGG...GTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
3UTR CAA 72 bp TCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTaGGAAGTGGAACTTGTGGTCCCAGTGACTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKSFFVSAWNSC*EVELVVPVTQG
Trigger: CCCCTGAGTCACTGGGACCACAAGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS-3UTR TCA 90 bp GGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTAAACACCTCTTTTTCTaGGTACAGGGACCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GPGNNVQKLLCLGLELMFKHLFF*VQGPGN
Trigger: GTTGCCCGGTCCCTGTACTCAGAAAAAGAGGTGTTT...AAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571011.1
ENST00000571804.5
CDS-3UTR GCA 90 bp ATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MSKSFFVSAWNSCLEVEPLLIIE*RGSSLS
Trigger: GGACAAGGAGGAACCCCTGCACTCGATTATCAGCAG...GGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CCA 90 bp GTGACGCAGTTTTTCCAAGGCATCGCTGGCATTGGAGATCAGCTCCCGTATAAAACTCATGTTTGGAAGTaGAACCCTGCACGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VTQFFQGIAGIGDQLPYKTHVWK*NPARSL
Trigger: CAGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGT...TTTATACGGGAGCTGATCTCCAATGCCAGCGATGCCTTGGAAAAACTGCGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp GTGACGCAGTTTTTCCAAGGCATCGCTGGCATTGGAGATCAGCTCCCGTATAAAATTTCTGGCAGTGCTTaGCCGTCAGACACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VTQFFQGIAGIGDQLPYKISGSA*PSDTSL
Trigger: CAAACTGGTGTCTGACGGCCAAGCACTGCCAGAAAT...TTTATACGGGAGCTGATCTCCAATGCCAGCGATGCCTTGGAAAAACTGCGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp ATTTGTACAAGCGAGGCCCAAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCGTCCAGCAGCAATCATaGCGTTCTCGTATATCTGAT +
Preference number: 4 (lower is better)
Translates to: ICTSEAQVPAFLLAGRGSVQQQS*RSRISD
Trigger: ATCAGATATACGAGAACGCCATGATTGCTGCTGGAC...GCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTTGGGCCTCGCTTGTACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
3UTR CAA 72 bp AGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: STGTGQQCPKAS*SRPGTHVWKWN
Trigger: GTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR TCA 90 bp AGTGTGAGAGAAATGCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGTCGCTTGCGCGCAGCTaGTTCAGCTTCTTGATGAGC +
Preference number: 4 (lower is better)
Translates to: SVREMHVYTLSLQVAVTWSLARS*FSFLMS
Trigger: GCTCATCAAGAAGCTGAATCAGCTGCGCGCAAGCGA...CCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGCATTTCTCTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CCA 90 bp GGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGGTGAATCTCCATTTCTaGCAGTGCTTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: GQQCPKASLSRPGTHVWKVNLHF*QCLAVR
Trigger: TCTGACGGCCAAGCACTGCCAGAAATGGAGATTCAC...CTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp TTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTTGCCTTTCTCGGCATTaGTCTGCAAGTGAATCTCCA +
Preference number: 4 (lower is better)
Translates to: FLSTGTGQQCPKASLSRPCLSRH*SASESP
Trigger: TGGAGATTCACTTGCAGACCAATGCCGAGAAAGGCA...AGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CCA 90 bp AGTGTGAGAGAAATGCATGTGTATACACTGAGTTTGCAGGTGGCTGTTACATGGTTCCAGCCTTCCTTCTaGCAGGTAGAGGAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVREMHVYTLSLQVAVTWFQPSF*QVEEAG
Trigger: CCCTGCTTCCTCTACCTGCCAGAAGGAAGGCTGGAA...CCATGTAACAGCCACCTGCAAACTCAGTGTATACACATGCATTTCTCTCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR TCA 90 bp ACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACACAGACAGAAAAGCAGACCTGGCAGTGTaGGAGAAATGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: TEFAGGCYMAALTDTDRKADLAV*EKCMCI
Trigger: TATACACATGCATTTCTCTCACACTGCCAGGTCTGC...TTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR GCA 90 bp ACTGAGTTTGCAGGTGGCTGTTACATGGCAGCATTGACTGACACAGACAGAAAAGAAGCAGGGGCACTATaGCTGGGAGTTCCTTTAAAT +
Preference number: 4 (lower is better)
Translates to: TEFAGGCYMAALTDTDRKEAGAL*LGVPLN
Trigger: ATTTAAAGGAACTCCCAGGCATAGTGCCCCTGCTTC...TTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAACAGCCACCTGCAAACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CCA 90 bp CTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LFLSTGTGQQCPKASLSRFFVSA*NSCLEV
Trigger: CACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA...CCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS GCA 90 bp GTGGGCTGCAGGAGCTGTGCGCGCTCCTCCTGGGTCTTGGCCAGCTaGTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATCTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: VGCRSCARSSWVLAS*CMRRKWRAAPISST
Trigger: CGTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS GCA 90 bp GCGGGGAGGGCGTCGTGTTCACCACGCACGTCTTCTCCACCACCGTaGAGGCCTGAGCCAGTGCAGCGCCTGGCCCTGGACAGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: AGRASCSPRTSSPPP*RPEPVQRLALDRLL
Trigger: CAGGAGCCTGTCCAGGGCCAGGCGCTGCACTGGCTCAGGCCTGCACGGTGGTGGAGAAGACGTGCGTGGTGAACACGACGCCCTCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS CCA 90 bp TGTTGCGGGTGCCGGCCCGCATGCGGCTGGCGTATTCTGAGAGGCTaGTTAGCTGCCCGGAGGGCAGCGCCGAGGACTCGTAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: CCGCRPACGWRILRG*LAARRAAPRTRSAA
Trigger: TGCTGCGCTACGAGTCCTCGGCGCTGCCCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CCA 90 bp GGGCGCACAGGTAGTAGATGTTGCGGGTGCCGGCCCGCATGCGGCTaGCGTATTCTGAGAGGCTGGTTAGCTGCCCGGAGGGCAGCGCCG +
Preference number: 5 (lower is better)
Translates to: GRTGSRCCGCRPACG*RILRGWLAARRAAP
Trigger: CGGCGCTGCCCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CCA 90 bp TCTCCAGCGTGGGCTGCAGGAGCTGTGCGCGCTCCTCCTGGGTCTTaGCCAGCTGCTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATCT +
Preference number: 5 (lower is better)
Translates to: SPAWAAGAVRAPPGS*PAAACAGSGGQPPS
Trigger: AGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS CCA 90 bp GGGTTGATCTCCAGCGTGGGCTGCAGGAGCTGTGCGCGCTCCTCCTaGGTCTTGGCCAGCTGCTGCATGCGCAGGAAGTGGCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLISSVGCRSCARSS*VLASCCMRRKWRAA
Trigger: GGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGATCAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS TCA 90 bp GCTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATCTCCAGCACGGTaGCCATGGCAGGGTGGGTGTCCAGTCGGAGGGTCACCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: AACAGSGGQPPSPAR*PWQGGCPVGGSPVS
Trigger: GCTCACAGGTGACCCTCCGACTGGACACCCACCCTGCCATGGTCACCGTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS GCA 90 bp GAGCGCGTGCCTGGGGTTGATCTCCAGCGTGGGCTGCAGGAGCTGTaGGCGCTCCTCCTGGGTCTTGGCCAGCTGCTGCATGCGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ERVPGVDLQRGLQEL*ALLLGLGQLLHAQE
Trigger: TTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGATCAACCCCAGGCACGCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS TCA 90 bp GCTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATCTCCAGCACGGTaGCCATGGCAGGGTGGGTGTCCAGTCGGAGGGTCACCTTCACGT +
Preference number: 5 (lower is better)
Translates to: AACAGSGGQPPSPAR*PWQGGCPVGGSPSR
Trigger: ACGTGAAGGTGACCCTCCGACTGGACACCCACCCTGCCATGGTCACCGTGCTGGAGATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 90 bp GGTTGGGGGCGCACAGGTAGTAGATGTTGCGGGTGCCGGCCCGCATaGGGCTGGCGTATTCTGAGAGGCTGGTTAGCTGCCCGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: GWGRTGSRCCGCRPA*GWRILRGWLAARRA
Trigger: TGCCCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 90 bp AGTGCTCTGCCAGGTGACGGTTGGGGGCGCACAGGTAGTAGATGTTaGGGGTGCCGGCCCGCATGCGGCTGGCGTATTCTGAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SALPGDGWGRTGSRC*GCRPACGWRILRGW
Trigger: CCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGGCAGAGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 90 bp AGCTTCTTGATGAGCGCGTGCCTGGGGTTGATCTCCAGCGTGGGCTaGAGGAGCTGTGCGCGCTCCTCCTGGGTCTTGGCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SFLMSACLGLISSVG*RSCARSSWVLASCC
Trigger: GCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGATCAACCCCAGGCACGCGCTCATCAAGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS GCA 90 bp GTTCACCACGCACGTCTTCTCCACCACCGTGCAGGCCTGAGCCAGTaGAGCGCCTGGCCCTGGACAGGCTCCTGCAAGGTGTTCATCCGC +
Preference number: 5 (lower is better)
Translates to: VHHARLLHHRAGLSQ*SAWPWTGSCKVFIR
Trigger: GCGGATGAACACCTTGCAGGAGCCTGTCCAGGGCCAGGCGCTGCACTGGCTCAGGCCTGCACGGTGGTGGAGAAGACGTGCGTGGTGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS CCA 90 bp GAGAGGATGACGCTGCCCAGCAGGGGCGAGCTGACGAATACAGTGTaGGCCGTGAGAGCGATGACGACCCACGCTGCACCGCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ERMTLPSRGELTNTV*AVRAMTTHAAPQLS
Trigger: GCTCAGCTGCGGTGCAGCGTGGGTCGTCATCGCTCTCACGGCCCACACTGTATTCGTCAGCTCGCCCCTGCTGGGCAGCGTCATCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS GCA 90 bp GCTGACGAATACAGTGTGGGCCGTGAGAGCGATGACGACCCACGCTaGACCGCAGCTGAGCCGCGAGGGGGAAGTCAGTCACTGAGGACA +
Preference number: 5 (lower is better)
Translates to: ADEYSVGRESDDDPR*TAAEPRGGSQSLRT
Trigger: TGTCCTCAGTGACTGACTTCCCCCTCGCGGCTCAGCTGCGGTGCAGCGTGGGTCGTCATCGCTCTCACGGCCCACACTGTATTCGTCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS CCA 90 bp ACACTGTGGAGCAGAAATGGCATCACGGAGGGAGGACGCCTCGGCTaGCTGGAAGCGGCTCACCTGCTAAAAAGCCCTCGGAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: TLWSRNGITEGGRLG*LEAAHLLKSPRSQA
Trigger: CGCCTGGCTCCGAGGGCTTTTTAGCAGGTGAGCCGCTTCCAGCCAGCCGAGGCGTCCTCCCTCCGTGATGCCATTTCTGCTCCACAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576788.1
CDS CCA 90 bp TCTTCATGGCCTCATAGTAGGGTGAGTGCTCTGCCAGGTGACGGTTaGGGGCGCACAGGTAGTAGATGTTGCGGGTGCCGGCCCGCATGC +
Preference number: 5 (lower is better)
Translates to: SSWPHSRVSALPGDG*GRTGSRCCGCRPAC
Trigger: GCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGGCAGAGCACTCACCCTACTATGAGGCCATGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CCA 90 bp TGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTaGAACCTCCCGGCACGGCCGCCAGCGCCGGCGCCCGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: CPKASLSRPGTHVWK*NLPARPPAPAPAAK
Trigger: CTTTGCTGCGGGCGCCGGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CCA 90 bp TGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATGGCCTaGAAACGGAGATCGGCGGGGAGGGCGTCGTGTTCACCACGCACG +
Preference number: 5 (lower is better)
Translates to: CCHSRTSLGSIIQMA*KRRSAGRASCSPRT
Trigger: CGTGCGTGGTGAACACGACGCCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp GATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGTGCAGGGGTTCCTCCTaGTCCTCGGCGGTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: DNRVQGFLLVLGGLRAEQCRGSS*SSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCA...CTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CAA 90 bp CCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGCATTTCTGGCAGTGCTaGGCCGTCAGACACCAGTTT +
Preference number: 5 (lower is better)
Translates to: PGWVSPGAQLGCGPPRTQHFWQC*AVRHQF
Trigger: AAACTGGTGTCTGACGGCCAAGCACTGCCAGAAATG...CTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CAA 90 bp GAGGCCCAAGTTCCAGCCTTCCTTCTGGCAGGTAGAGGAAGCAGGGGCACTATGCCAGGCCAGGCTCGCTaGCGCGCAGCTGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: EAQVPAFLLAGRGSRGTMPGQAR*RAADSA
Trigger: AGCTGAATCAGCTGCGCGCAAGCGAGCCTGGCCTGG...CATAGTGCCCCTGCTTCCTCTACCTGCCAGAAGGAAGGCTGGAACTTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS TCA 90 bp CACGGTGACCATGGCAGGGTGGGTGTCCAGTCGGAGGGTCACCTGTaGGCAAAGCCCGGGGTTGAGGGTGATAGAGGTTCCCAATGTGAG +
Preference number: 5 (lower is better)
Translates to: HGDHGRVGVQSEGHL*AKPGVEGDRGSQCE
Trigger: CTCACATTGGGAACCTCTATCACCCTCAACCCCGGGCTTTGCTCACAGGTGACCCTCCGACTGGACACCCACCCTGCCATGGTCACCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS CCA 90 bp CAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTaGAAGTGGAACCTCCCGGCACGGCCGCCAGCGCCGGCGCCCGCA +
Preference number: 5 (lower is better)
Translates to: QQCPKASLSRPGTHV*KWNLPARPPAPAPA
Trigger: TGCGGGCGCCGGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CCA 90 bp CCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATaGCCTGGAAACGGAGATCGGCGGGGAGGGCGTCGTGTTCACCAC +
Preference number: 5 (lower is better)
Translates to: PHVATHGHPWGPSSR*PGNGDRRGGRRVHH
Trigger: GTGGTGAACACGACGCCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp CTGAACAGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACGCCTGGAACTCATGTTaGGAAGTGGAACCCTGCACG +
Preference number: 5 (lower is better)
Translates to: LNSRPACKLQAGFRLGPNAWNSC*EVEPCT
Trigger: CGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGC...GTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACTGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CAA 90 bp CCCGTCCTGAGGGCAGCCACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGGGCAGCACTCGCCATTaGTACAAGCGAGGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: PVLRAATQQAALAICTSEGSTRH*YKRGPS
Trigger: ACTTGGGCCTCGCTTGTACAAATGGCGAGTGCTGCC...CTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTCAGGACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS GCA 90 bp GATGTCCGTGGCCTTGGTCTGGATGAGGACTTTGCGGCTGTACAGTaGAACGCTGGAGCCCAGCTCCCGGCTCACATCAAACATGGACGG +
Preference number: 5 (lower is better)
Translates to: DVRGLGLDEDFAAVQ*NAGAQLPAHIKHGR
Trigger: CCGTCCATGTTTGATGTGAGCCGGGAGCTGGGCTCCAGCGTTGCACTGTACAGCCGCAAAGTCCTCATCCAGACCAAGGCCACGGACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
ENST00000576335.5
CDS GCA 90 bp CCACACCATGTCGGGCACGTAGAAGATGCTGCGGATGTTGAGCGGTaGGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGC +
Preference number: 5 (lower is better)
Translates to: PHHVGHVEDAADVER*VRLIVQGVAGLVVS
Trigger: GCTCACGACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573872.5
CDS-3UTR CAA 90 bp AGTCGTCCTGCCTGCAAGCTCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTTTCAGTGAGCTGAAATaGCATCTCTGCACTCGAGCC +
Preference number: 5 (lower is better)
Translates to: SRPACKLQAGFRLGPNWAFSELK*HLCTRA
Trigger: GGCTCGAGTGCAGAGATGCAATTTCAGCTCACTGAA...AGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGAGCTTGCAGGCAGGACGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS TCA 90 bp ATAGAGGTTCCCAATGTGAGAGGGCTGGCAGGATCTTACCAGGGGTaGAGGTCACCCAGACCACGAGGTAGCAGGCGGGGTCTCAAGGAC +
Preference number: 5 (lower is better)
Translates to: IEVPNVRGLAGSYQG*RSPRPRGSRRGLKD
Trigger: GTCCTTGAGACCCCGCCTGCTACCTCGTGGTCTGGGTGACCTTCACCCCTGGTAAGATCCTGCCAGCCCTCTCACATTGGGAACCTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS TCA 90 bp CTGTCCACCACACCATGTCGGGCACGTAGAAGATGCTGCGGATGTTaGGCGGTGCGTCCGTCTTATAGTGCAGGGTGTAGCGGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: LSTTPCRARRRCCGC*AVRPSYSAGCSGAC
Trigger: ACAAGCCCCGCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGGTGTGGTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573872.5
CDS GCA 90 bp ACCGCAGCTGAGCCGCGAGGGGGAAGTCAGTCACTGAGGACAGCATaGCGTGTGACTCCATCCAGGAGAAACGTCTGCAAGGTGTTCATC +
Preference number: 5 (lower is better)
Translates to: TAAEPRGGSQSLRTA*RVTPSRRNVCKVFI
Trigger: GATGAACACCTTGCAGACGTTTCTCCTGGATGGAGTCACACGGCATGCTGTCCTCAGTGACTGACTTCCCCCTCGCGGCTCAGCTGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS CCA 90 bp AAGGAGGTGGGGCTGTCATCTGTGGTGTCAGTCCTTCTGGCCCCCTaGCTGTCAGTGTCGCTCCAGGGCCTTGACAAGCAGCTCATTCAA +
Preference number: 5 (lower is better)
Translates to: KEVGLSSVVSVLLAP*LSVSLQGLDKQLIQ
Trigger: TTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACACTGACAGCCAGGGGGCCAGAAGGACTGACACCACAGATGACAGCCCCACCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
ENST00000575707.5
CDS-3UTR CAA 90 bp GATAATCGAGTGCAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTGCTGAACAGCATCCAGGAAGGCCTTaGACCCCGATCTGGCAATCG +
Preference number: 5 (lower is better)
Translates to: DNRVQGFLLVLGGLRAEQHPGRP*TPIWQS
Trigger: CGATTGCCAGATCGGGGTCAAAGGCCTTCCTGGATG...CTGTTCAGCACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CAA 90 bp GAGGGCAGCCACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGGCCCAAGTTGTCGCTCCAGGGCCTaGACAAGCAGCTCATTCAAG +
Preference number: 5 (lower is better)
Translates to: EGSHTAGSTRHLYKRGPSCRSRA*TSSSFK
Trigger: CTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACA...ACTTGGGCCTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS CCA 90 bp TACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACCTCCCGGCACGGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: YRDRATMSKSFFVSA*NSCLEVEPPGTAAS
Trigger: GCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS-3UTR CAA 90 bp TTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTTGCAGGGGTTCCTCCTaGTCCTCGGCGGTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: FFVSAWNSCLEVEPCTLSCRGSS*SSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCA...AGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CAA 90 bp TCTTATAGTGCAGGGTGTAGCGGGGCTTGTCGTGAGCCTGCGCGACGTAGCGGTTCGCTGGAAAACTCCTaGCAGTCGGATTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SYSAGCSGACREPARRSGSLENS*QSDFRW
Trigger: CCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGA...ACCGCTACGTCGCGCAGGCTCACGACAAGCCCCGCTACACCCTGCACTATAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp GTGAGCCTGCGCGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCAAGATGCTGCGGATGTaGAGCGGTGCGTCCGTCTTA +
Preference number: 5 (lower is better)
Translates to: VSLRDVAVELLMLPLTDIKMLRM*SGASVL
Trigger: TAAGACGGACGCACCGCTCAACATCCGCAGCATCTT...GATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCGCGCAGGCTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS GCA 90 bp GTGGGACAAGTGTGTTTTCCATTTGATTCCCAAAGCTCACAGTCCTaGCTGTCCCAGACAGGTGGAGGCCTGTGGGTCACACCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: VGQVCFPFDSQSSQS*LSQTGGGLWVTPGG
Trigger: ACCCCCAGGTGTGACCCACAGGCCTCCACCTGTCTGGGACAGGCAGGACTGTGAGCTTTGGGAATCAAATGGAAAACACACTTGTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CCA 90 bp CGCACCCGGGCCTCGCTGGAAAACTCCTTGCAGTCGGATTTCAGGTaGATGATGATTTTTGTCCCGGTTCTAACTCCCGAAGCTTCGGCG +
Preference number: 5 (lower is better)
Translates to: RTRASLENSLQSDFR*MMIFVPVLTPEASA
Trigger: CGCCGAAGCTTCGGGAGTTAGAACCGGGACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS CCA 90 bp CGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTaGGGTCCATCATCCAGATGGCCTGCAAGGTGTTCATCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: RRSGRTPHVATHGHP*GPSSRWPARCSSAF
Trigger: GAAGGCGGATGAACACCTTGCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000575671.5
ENST00000576335.5
CDS CCA 90 bp CTGCCTGTCCCAGACAGGTGGAGGCCTGTGGGTCACACCTGGGGGTaGGGAAAGAGCAGCTTGAATAAGCTCTTTCCCTTGAATAAGCTC +
Preference number: 5 (lower is better)
Translates to: LPVPDRWRPVGHTWG*GKSSLNKLFPLNKL
Trigger: GAGCTTATTCAAGGGAAAGAGCTTATTCAAGCTGCTCTTTCCCCACCCCCAGGTGTGACCCACAGGCCTCCACCTGTCTGGGACAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS-3UTR CAA 90 bp ACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGTGCAGGGGTTCCTCCTaGTCCTCGGCGGTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: TGQQCPKASLSRPGTHVWCRGSS*SSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCA...CCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS-3UTR CAA 90 bp CCCGTCCTGAGGGCAGCCACACAGCAGGCAGCACTCGCCATTTGTACAAGCGAGGTGTATACACTGAGTTaGCAGGTGGCTGTTACATGG +
Preference number: 5 (lower is better)
Translates to: PVLRAATQQAALAICTSEVYTLS*QVAVTW
Trigger: CCATGTAACAGCCACCTGCAAACTCAGTGTATACAC...CTCGCTTGTACAAATGGCGAGTGCTGCCTGCTGTGTGGCTGCCCTCAGGACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS-3UTR CAA 90 bp TTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTAACTGGCCGATGATCTaGCTGCTGGCCTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: FFVSAWNSCLEVEPCTLSNWPMI*LLASAW
Trigger: CCAGGCTGAGGCCAGCAGCAAGATCATCGGCCAGTT...AGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CAA 90 bp GAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATGGCCACTCACGGACATCCTaGGGGTCCATCATCCAGATG +
Preference number: 5 (lower is better)
Translates to: ELLMLPLTDILGVHHPDGHSRTS*GSIIQM
Trigger: CATCTGGATGATGGACCCCAAGGATGTCCGTGAGTG...GCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp AGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTGGTCCTCCGAGGACACAGAAACGACTAATGCAGTTTaGATGTGGGGACACTTCATA +
Preference number: 5 (lower is better)
Translates to: RLGFAWGPTGLWSSEDTETTNAV*MWGHFI
Trigger: TATGAAGTGTCCCCACATCAAAACTGCATTAGTCGT...TTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS TCA 90 bp CCTGCAAGGTGTTCATCCGCCTTCCATTCAAGTACAAGGGGAAGCTaGCGAAGTTGCTGTACTTCGTTACCACATCTCGCACCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: PARCSSAFHSSTRGS*RSCCTSLPHLAPGP
Trigger: AGGCCCGGGTGCGAGATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACACCTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000576335.5
CDS-3UTR CAA 90 bp GTGGAACCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCTCCTGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCAT +
Preference number: 5 (lower is better)
Translates to: VEPCTLSVLLIIECRGSSCPKAS*SRPGTH
Trigger: ATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACA...GGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CAA 90 bp TTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTGCAATCGTCCCCAGGTaGGACACCAGCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: FFVSAWNSCLEVEPCTLSAIVPR*DTSSSC
Trigger: ACAGGAAGAGCTGGTGTCCAACCTGGGGACGATTGC...AGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CAA 90 bp CGACGTAGCGGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTGGGGTCCAGGGAAGCTGACGAAGTaGCTGTACTTCGTTACCACA +
Preference number: 5 (lower is better)
Translates to: RRSGRTPHVATHGHPWGPGKLTK*LYFVTT
Trigger: TGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCC...TGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACCGCTACGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp TGCCACTCACGGACATCCTTGGGGTCCATCATCCAGATGGCCTGGAAACGGAGAGTAGAACTCCTCATGTaGCCACTCACGGACATCCTT +
Preference number: 5 (lower is better)
Translates to: CHSRTSLGSIIQMAWKRRVELLM*PLTDIL
Trigger: AAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTAC...TCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS-3UTR CAA 90 bp AACAGTGATCCCAGACGGGCCCCATGTCAGACCAGGCTCCTCCAGGGCTGTGCTTGTTACATGGCAGCATaGACTGACACAGACAGAAAA +
Preference number: 5 (lower is better)
Translates to: NSDPRRAPCQTRLLQGCACYMAA*TDTDRK
Trigger: TTTTCTGTCTGTGTCAGTCAATGCTGCCATGTAACA...AGCACAGCCCTGGAGGAGCCTGGTCTGACATGGGGCCCGTCTGGGATCACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575707.5
CDS TCA 90 bp TCTGCAAGGTGTTCATCCGCCTTCCATTCAAGTACAAGGGGAAGCTaGCGAAGTTGCTGTACTTCGTTACCACATCTCGCACCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: SARCSSAFHSSTRGS*RSCCTSLPHLAPGP
Trigger: AGGCCCGGGTGCGAGATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACACCTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS GCA 90 bp TCACTGAGGACAGCATGCCGTGTGACTCCATCCAGGAGAAACGTCTaGAAGGTGTTCATCCGCCTTCCATTCAAGTACAAGGGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: SLRTACRVTPSRRNV*KVFIRLPFKYKGKL
Trigger: CAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACACCTTGCAGACGTTTCTCCTGGATGGAGTCACACGGCATGCTGTCCTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS CCA 90 bp TCAAGTAAAATACACACGCCCACTGCCCTGGCCCACGTTGTCCGATaGAACTTTCTCCAACAACAGGAACGTTCTGCCAGGTGCAATGCG +
Preference number: 5 (lower is better)
Translates to: SSKIHTPTALAHVVR*NFLQQQERSARCNA
Trigger: CGCATTGCACCTGGCAGAACGTTCCTGTTGTTGGAGAAAGTTCCATCGGACAACGTGGGCCAGGGCAGTGGGCGTGTGTATTTTACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS-3UTR CAA 90 bp TTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCCTGCACGCTCTCTAAGGCATCGCTGGCATaGGAGATCAGCTCCCGTATA +
Preference number: 5 (lower is better)
Translates to: FFVSAWNSCLEVEPCTLSKASLA*EISSRI
Trigger: TATACGGGAGCTGATCTCCAATGCCAGCGATGCCTT...AGAGAGCGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS-3UTR CAA 90 bp AGTGGAACCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTGCAGGGGTTCCTCTCCGAGGACACAGAATaGGTTTTCAATGCAGTTTTG +
Preference number: 5 (lower is better)
Translates to: SGTLHALCAADNRVQGFLSEDTE*VFNAVL
Trigger: CAAAACTGCATTGAAAACCAATTCTGTGTCCTCGGA...GAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGTTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS GCA 90 bp TCCGTCTCCACAGAGATCAGCTTCTTCTTGTCAAACTCACGAAGGTaGAGCAGGGTGAGCTCATCAAACTGCTCAAAGCAGAAGAGAACC +
Preference number: 5 (lower is better)
Translates to: SVSTEISFFLSNSRR*SRVSSSNCSKQKRT
Trigger: GGTTCTCTTCTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGCTGATCTCTGTGGAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS-3UTR CAA 90 bp AACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAGCCTGGAACTCATGTTaGGAAGTGGAACCCTGCACG +
Preference number: 5 (lower is better)
Translates to: NNVQKLLCLGLELMFGSGAWNSC*EVEPCT
Trigger: CGTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGC...TCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS-3UTR CAA 90 bp GGACCGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTTGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCAT +
Preference number: 5 (lower is better)
Translates to: GPGNNVQKLLCLGLELMFCPKAS*SRPGTH
Trigger: ATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACA...AAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000570403.1
ENST00000571011.1
ENST00000571804.5
CDS TCA 90 bp CAGAGATCAGCTTCTTCTTGTCAAACTCACGAAGGTGCAGCAGGGTaGGCTCATCAAACTGCTCAAAGCAGAAGAGAACCTCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: QRSASSCQTHEGAAG*AHQTAQSRREPLCL
Trigger: AAGACACAGAGGTTCTCTTCTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGCTGATCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CCA 90 bp AGGAGTGAGGAGAGGCTCCAAACTGGCTTCCATATTCAAGTCTCCTaGACTCTACACTTTGTGGGAAAAAGAGTAGAAATCACGCGCATG +
Preference number: 5 (lower is better)
Translates to: RSEERLQTGFHIQVS*TLHFVGKRVEITRM
Trigger: CATGCGCGTGATTTCTACTCTTTTTCCCACAAAGTGTAGAGTCCAGGAGACTTGAATATGGAAGCCAGTTTGGAGCCTCTCCTCACTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS-3UTR CAA 90 bp CAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTGGGCCTGGAACTCATGTTaGGAAGTGGAACTTGTGGTC +
Preference number: 5 (lower is better)
Translates to: QQCPKASLSRPGTHVWKWAWNSC*EVELVV
Trigger: GACCACAAGTTCCACTTCCAAACATGAGTTCCAGGC...CCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS CCA 90 bp TGGTCCTCCGAGGACACAGAATTGGTTTTCAATGCAGTTTTGATGTaGGGACACTTCATAGACGAAGGATTCTTCACATTTCAATGGCCC +
Preference number: 5 (lower is better)
Translates to: WSSEDTELVFNAVLM*GHFIDEGFFTFQWP
Trigger: GGGCCATTGAAATGTGAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTGAAAACCAATTCTGTGTCCTCGGAGGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS CAA 90 bp ATCTCCAGCGTGGGCTGCAGGAGCTGTGCGCGCTCCTCCTGGGTCTaGGCCAGCTGCTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATC +
Preference number: 6 (lower is better)
Translates to: ISSVGCRSCARSSWV*ASCCMRRKWRAAPI
Trigger: GATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS GCA 72 bp AGGAGCTGTGCGCGCTCCTCCTGGGTCTTGGCCAGCTaGTGCATGCGCAGGAAGTGGCGGGCAGCCCCCATC +
Preference number: 6 (lower is better)
Translates to: RSCARSSWVLAS*CMRRKWRAAPI
Trigger: GATGGGGGCTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS CCA 72 bp TGGGCTGCAGGAGCTGTGCGCGCTCCTCCTGGGTCTTaGCCAGCTGCTGCATGCGCAGGAAGTGGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: WAAGAVRAPPGS*PAAACAGSGGQ
Trigger: CTGCCCGCCACTTCCTGCGCATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS GCA 72 bp ATGAGCGCGTGCCTGGGGTTGATCTCCAGCGTGGGCTaGAGGAGCTGTGCGCGCTCCTCCTGGGTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MSACLGLISSVG*RSCARSSWVLA
Trigger: GGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGATCAACCCCAGGCACGCGCTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS GCA 72 bp GCGTCGTGTTCACCACGCACGTCTTCTCCACCACCGTaGAGGCCTGAGCCAGTGCAGCGCCTGGCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: ASCSPRTSSPPP*RPEPVQRLALD
Trigger: GTCCAGGGCCAGGCGCTGCACTGGCTCAGGCCTGCACGGTGGTGGAGAAGACGTGCGTGGTGAACACGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS CCA 72 bp CTCCACCACCGTGCAGGCCTGAGCCAGTGCAGCGCCTaGCCCTGGACAGGCTCCTGCAAGGTGTTCATCCGC +
Preference number: 6 (lower is better)
Translates to: LHHRAGLSQCSA*PWTGSCKVFIR
Trigger: GCGGATGAACACCTTGCAGGAGCCTGTCCAGGGCCAGGCGCTGCACTGGCTCAGGCCTGCACGGTGGTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS GCA 72 bp GACGGTTGGGGGCGCACAGGTAGTAGATGTTGCGGGTaGCGGCCCGCATGCGGCTGGCGTATTCTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: DGWGRTGSRCCG*RPACGWRILRG
Trigger: GCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 72 bp CCAGGTGACGGTTGGGGGCGCACAGGTAGTAGATGTTaGGGGTGCCGGCCCGCATGCGGCTGGCGTATTCTG +
Preference number: 6 (lower is better)
Translates to: PGDGWGRTGSRC*GCRPACGWRIL
Trigger: CAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 72 bp CCTGGGGTTGATCTCCAGCGTGGGCTGCAGGAGCTGTaGGCGCTCCTCCTGGGTCTTGGCCAGCTGCTGCAT +
Preference number: 6 (lower is better)
Translates to: PGVDLQRGLQEL*ALLLGLGQLLH
Trigger: ATGCAGCAGCTGGCCAAGACCCAGGAGGAGCGCGCACAGCTCCTGCAGCCCACGCTGGAGATCAACCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
CDS CCA 72 bp GCTTCTTTGTCTCGGCCTGGAACTCATGTTTGGAAGTaGAACCTCCCGGCACGGCCGCCAGCGCCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: ASLSRPGTHVWK*NLPARPPAPAP
Trigger: GGGCGCCGGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CCA 72 bp ACGCTGCCCAGCAGGGGCGAGCTGACGAATACAGTGTaGGCCGTGAGAGCGATGACGACCCACGCTGCACCG +
Preference number: 6 (lower is better)
Translates to: TLPSRGELTNTV*AVRAMTTHAAP
Trigger: CGGTGCAGCGTGGGTCGTCATCGCTCTCACGGCCCACACTGTATTCGTCAGCTCGCCCCTGCTGGGCAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS TCA 72 bp TCTGGCCCCCTGGCTGTCAGTGTCGCTCCAGGGCCTTaGCAAGCAGCTCATTCAAGCGGCCCACCATGGCCC +
Preference number: 6 (lower is better)
Translates to: SGPLAVSVAPGP*QAAHSSGPPWP
Trigger: GGGCCATGGTGGGCCGCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACACTGACAGCCAGGGGGCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
ENST00000575707.5
CDS GCA 72 bp TACAGTGTGGGCCGTGAGAGCGATGACGACCCACGCTaGACCGCAGCTGAGCCGCGAGGGGGAAGTCAGTCA +
Preference number: 6 (lower is better)
Translates to: YSVGRESDDDPR*TAAEPRGGSQS
Trigger: TGACTGACTTCCCCCTCGCGGCTCAGCTGCGGTGCAGCGTGGGTCGTCATCGCTCTCACGGCCCACACTGTA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575854.5
CDS CCA 72 bp GGTAGTAGATGTTGCGGGTGCCGGCCCGCATGCGGCTaGCGTATTCTGAGAGGCTGGTTAGCTGCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: GSRCCGCRPACG*RILRGWLAARR
Trigger: CCTCCGGGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 72 bp CGCACAGGTAGTAGATGTTGCGGGTGCCGGCCCGCATaGGGCTGGCGTATTCTGAGAGGCTGGTTAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RTGSRCCGCRPA*GWRILRGWLAA
Trigger: GGCAGCTAACCAGCCTCTCAGAATACGCCAGCCGCATGCGGGCCGGCACCCGCAACATCTACTACCTGTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 72 bp CGGCCCTGCACGCTCTCTGTGCTGCTGATAATCGAGTaGAGGGGTTCCTCCTTGTCCTCGGCGGTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: RPCTLSVLLIIE*RGSSLSSAVCV
Trigger: CACGCAGACCGCCGAGGACAAGGAGGAACCCCTGCACTCGATTATCAGCAGCACAGAGAGCGTGCAGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571011.1
CDS CAA 72 bp TTCTGGCCCCCTGGCTGTCAGTGTCGCTCCAGGGCCTaGACAAGCAGCTCATTCAAGCGGCCCACCATGGCC +
Preference number: 6 (lower is better)
Translates to: FWPPGCQCRSRA*TSSSFKRPTMA
Trigger: GGCCATGGTGGGCCGCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACACTGACAGCCAGGGGGCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
ENST00000575707.5
CDS CAA 90 bp TGTCAGTCCTTCTGGCCCCCTGGCTGTCAGTGTCGCTCCAGGGCCTaGACAAGCAGCTCATTCAAGCGGCCCACCATGGCCCTAGGGTCG +
Preference number: 6 (lower is better)
Translates to: CQSFWPPGCQCRSRA*TSSSFKRPTMALGS
Trigger: CGACCCTAGGGCCATGGTGGGCCGCTTGAATGAGCTGCTTGTCAAGGCCCTGGAGCGACACTGACAGCCAGGGGGCCAGAAGGACTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000574494.1
ENST00000575671.5
ENST00000575707.5
CDS CAA 90 bp GCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTaGGAAGTGGAACCTCCCGGCACGGCCGCCAGCGCCGGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: ATMSKSFFVSAWNSC*EVEPPGTAASAGAR
Trigger: GCGGGCGCCGGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS TCA 72 bp CATGGCAGGGTGGGTGTCCAGTCGGAGGGTCACCTGTaGGCAAAGCCCGGGGTTGAGGGTGATAGAGGTTCC +
Preference number: 6 (lower is better)
Translates to: HGRVGVQSEGHL*AKPGVEGDRGS
Trigger: GGAACCTCTATCACCCTCAACCCCGGGCTTTGCTCACAGGTGACCCTCCGACTGGACACCCACCCTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS CCA 72 bp CCTCATAGTAGGGTGAGTGCTCTGCCAGGTGACGGTTaGGGGCGCACAGGTAGTAGATGTTGCGGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: PHSRVSALPGDG*GRTGSRCCGCR
Trigger: CCGGCACCCGCAACATCTACTACCTGTGCGCCCCCAACCGTCACCTGGCAGAGCACTCACCCTACTATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CCA 72 bp AGCAGAAATGGCATCACGGAGGGAGGACGCCTCGGCTaGCTGGAAGCGGCTCACCTGCTAAAAAGCCCTCGG +
Preference number: 6 (lower is better)
Translates to: SRNGITEGGRLG*LEAAHLLKSPR
Trigger: CCGAGGGCTTTTTAGCAGGTGAGCCGCTTCCAGCCAGCCGAGGCGTCCTCCCTCCGTGATGCCATTTCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576788.1
CDS CAA 72 bp GGCAGGATGTCCGTGGCCTTGGTCTGGATGAGGACTTaGCGGCTGTACAGTGCAACGCTGGAGCCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GRMSVALVWMRT*RLYSATLEPSS
Trigger: GGAGCTGGGCTCCAGCGTTGCACTGTACAGCCGCAAAGTCCTCATCCAGACCAAGGCCACGGACATCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
ENST00000576335.5
CDS CAA 90 bp GGGTGGGTGTCCAGTCGGAGGGTCACCTGTGAGCAAAGCCCGGGGTaGAGGGTGATAGAGGTTCCCAATGTGAGAGGGCTGGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: GWVSSRRVTCEQSPG*RVIEVPNVRGLAGS
Trigger: AGATCCTGCCAGCCCTCTCACATTGGGAACCTCTATCACCCTCAACCCCGGGCTTTGCTCACAGGTGACCCTCCGACTGGACACCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS CCA 72 bp CCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTTaGAAGTGGAACCTCCCGGCACGGCCGCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: PKASLSRPGTHV*KWNLPARPPAP
Trigger: CGGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CCA 72 bp TCACGGACATCCTTGGGGTCCATCATCCAGATGGCCTaGAAACGGAGATCGGCGGGGAGGGCGTCGTGTTCA +
Preference number: 6 (lower is better)
Translates to: SRTSLGSIIQMA*KRRSAGRASCS
Trigger: TGAACACGACGCCCTCCCCGCCGATCTCCGTTTCCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574175.1
CDS CAA 90 bp ACACCTCGGATGAAGCGCAGCCACTTGGGCAGGATGTCCGTGGCCTaGGTCTGGATGAGGACTTTGCGGCTGTACAGTGCAACGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TPRMKRSHLGRMSVA*VWMRTLRLYSATLE
Trigger: CTCCAGCGTTGCACTGTACAGCCGCAAAGTCCTCATCCAGACCAAGGCCACGGACATCCTGCCCAAGTGGCTGCGCTTCATCCGAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
ENST00000576335.5
CDS GCA 72 bp GGCCTTGGTCTGGATGAGGACTTTGCGGCTGTACAGTaGAACGCTGGAGCCCAGCTCCCGGCTCACATCAAA +
Preference number: 6 (lower is better)
Translates to: GLGLDEDFAAVQ*NAGAQLPAHIK
Trigger: TTTGATGTGAGCCGGGAGCTGGGCTCCAGCGTTGCACTGTACAGCCGCAAAGTCCTCATCCAGACCAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
ENST00000576335.5
CDS GCA 72 bp AAAACGTCCCGGAGTTTCCTGATGAGTGCGCTCTCCTaGAGCAGCTCCCGGCTGAGGTTCAGGGGAATGTCC +
Preference number: 6 (lower is better)
Translates to: KTSRSFLMSALS*SSSRLRFRGMS
Trigger: GGACATTCCCCTGAACCTCAGCCGGGAGCTGCTGCAGGAGAGCGCACTCATCAGGAAACTCCGGGACGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000573872.5
ENST00000575671.5
ENST00000576335.5
CDS CCA 72 bp GGACACTTCATAGACGAAGGATTCTTCACATTTCAATaGCCCTACGGGAGCCTCCCGGCACGGCCGCCAGCG +
Preference number: 6 (lower is better)
Translates to: GHFIDEGFFTFQ*PYGSLPARPPA
Trigger: CGCTGGCGGCCGTGCCGGGAGGCTCCCGTAGGGCCATTGAAATGTGAAGAATCCTTCGTCTATGAAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570403.1
ENST00000571804.5
CDS CCA 72 bp GAGTGGGGAGTCAAGCTGAGCACAGTGCACACACTGTaGAGCAGAAATGGCATCACGGAGGGAGGACGCCTC +
Preference number: 6 (lower is better)
Translates to: EWGVKLSTVHTL*SRNGITEGGRL
Trigger: GAGGCGTCCTCCCTCCGTGATGCCATTTCTGCTCCACAGTGTGTGCACTGTGCTCAGCTTGACTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576788.1
CDS CAA 72 bp TCCAAAAGCTTCTTTGTCTCGGCCTGGAACTCATGTTaGGAAGTGGAACCTCCCGGCACGGCCGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SKSFFVSAWNSC*EVEPPGTAASA
Trigger: GGCGCTGGCGGCCGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CAA 72 bp TCCAGTCGGAGGGTCACCTGTGAGCAAAGCCCGGGGTaGAGGGTGATAGAGGTTCCCAATGTGAGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SSRRVTCEQSPG*RVIEVPNVRGL
Trigger: CAGCCCTCTCACATTGGGAACCTCTATCACCCTCAACCCCGGGCTTTGCTCACAGGTGACCCTCCGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574494.1
CDS GCA 72 bp GAGCGCGGTGGCGTGATCTCAGCTCACTGCAACCTCTaGCTGGAACTCATGTTTGGAAGTGGAACCCTGCAC +
Preference number: 6 (lower is better)
Translates to: ERGGVISAHCNL*LELMFGSGTLH
Trigger: GTGCAGGGTTCCACTTCCAAACATGAGTTCCAGGCAGAGGTTGCAGTGAGCTGAGATCACGCCACCGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574941.5
CDS CCA 72 bp TCCAGGCTGGGTTTCGCCTGGGGCCCAACTGGGCTGTaGTCCTCCGAGGACACAGAATTGGTTTTCCTGAAA +
Preference number: 6 (lower is better)
Translates to: SRLGFAWGPTGL*SSEDTELVFLK
Trigger: TTTCAGGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCCAGTTGGGCCCCAGGCGAAACCCAGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571538.5
CDS TCA 72 bp ACACCATGTCGGGCACGTAGAAGATGCTGCGGATGTTaGGCGGTGCGTCCGTCTTATAGTGCAGGGTGTAGC +
Preference number: 6 (lower is better)
Translates to: TPCRARRRCCGC*AVRPSYSAGCS
Trigger: GCTACACCCTGCACTATAAGACGGACGCACCGCTCAACATCCGCAGCATCTTCTACGTGCCCGACATGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573872.5
CDS CCA 72 bp ATACACACGCCCACTGCCCTGGCCCACGTTGTCCGATaGAACTTTCTCCAACAACAGGAACGTTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: IHTPTALAHVVR*NFLQQQERSAR
Trigger: CCTGGCAGAACGTTCCTGTTGTTGGAGAAAGTTCCATCGGACAACGTGGGCCAGGGCAGTGGGCGTGTGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CAA 72 bp CGCCTTCCATTCAAGTACAAGGGGAAGCTGACGAAGTaGCTGTACTTCGTTACCACATCTCGCACCCGGGCC +
Preference number: 6 (lower is better)
Translates to: RLPFKYKGKLTK*LYFVTTSRTRA
Trigger: GGCCCGGGTGCGAGATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS GCA 72 bp GTGTGTTTTCCATTTGATTCCCAAAGCTCACAGTCCTaGCTGTCCCAGACAGGTGGAGGCCTGTGGGTCACA +
Preference number: 6 (lower is better)
Translates to: VCFPFDSQSSQS*LSQTGGGLWVT
Trigger: TGTGACCCACAGGCCTCCACCTGTCTGGGACAGGCAGGACTGTGAGCTTTGGGAATCAAATGGAAAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CCA 72 bp GGTAGAACTCCTCATGTTGCCACTCACGGACATCCTTaGGGTCCATCATCCAGATGGCCTGCAAGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: GRTPHVATHGHP*GPSSRWPARCS
Trigger: TGAACACCTTGCAGGCCATCTGGATGATGGACCCCAAGGATGTCCGTGAGTGGCAACATGAGGAGTTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000575671.5
ENST00000576335.5
CDS CCA 72 bp CGGGCAACAATGTCCAAAAGCTTCTTTGTCTCGGCCTaGAACTCATGTTTGGAAGTGGAACCTCCCGGCACG +
Preference number: 6 (lower is better)
Translates to: RATMSKSFFVSA*NSCLEVEPPGT
Trigger: CGTGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CAA 90 bp GGCCAAAGTCAAGTAAAATACACACGCCCACTGCCCTGGCCCACGTaGTCCGATGGAACTTTCTCCAACAACAGGAACGTTCTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: GQSQVKYTRPLPWPT*SDGTFSNNRNVLPG
Trigger: ACCTGGCAGAACGTTCCTGTTGTTGGAGAAAGTTCCATCGGACAACGTGGGCCAGGGCAGTGGGCGTGTGTATTTTACTTGACTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CCA 72 bp GGCCAAAGTCAAGTAAAATACACACGCCCACTGCCCTaGCCCACGTTGTCCGATGGAACTTTCTCCAACAAC +
Preference number: 6 (lower is better)
Translates to: GQSQVKYTRPLP*PTLSDGTFSNN
Trigger: GTTGTTGGAGAAAGTTCCATCGGACAACGTGGGCCAGGGCAGTGGGCGTGTGTATTTTACTTGACTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CAA 72 bp ACCACATCTCGCACCCGGGCCTCGCTGGAAAACTCCTaGCAGTCGGATTTCAGGTGGATGATGATTTTTGTC +
Preference number: 6 (lower is better)
Translates to: TTSRTRASLENS*QSDFRWMMIFV
Trigger: GACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGCGAGATGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS CAA 72 bp CCTGTGGGTCACACCTGGGGGTGGGGAAAGAGCAGCTaGAATAAGCTCTTTCCCTTGAATAAGCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: PVGHTWGWGKSS*NKLFPLNKLLP
Trigger: TGGAAGGAGCTTATTCAAGGGAAAGAGCTTATTCAAGCTGCTCTTTCCCCACCCCCAGGTGTGACCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CAA 90 bp TACTTCGTTACCACATCTCGCACCCGGGCCTCGCTGGAAAACTCCTaGCAGTCGGATTTCAGGTGGATGATGATTTTTGTCCCGGTTCTA +
Preference number: 6 (lower is better)
Translates to: YFVTTSRTRASLENS*QSDFRWMMIFVPVL
Trigger: TAGAACCGGGACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGCCCGGGTGCGAGATGTGGTAACGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS CAA 90 bp CTTTTTCTGAGTACAGGGACCGGGCAACAATGTCCAAAAGCTTCTTaGTCTCGGCCTGGAACTCATGTTTGGAAGTGGAACCTCCCGGCA +
Preference number: 6 (lower is better)
Translates to: LFLSTGTGQQCPKAS*SRPGTHVWKWNLPA
Trigger: TGCCGGGAGGTTCCACTTCCAAACATGAGTTCCAGGCCGAGACAAAGAAGCTTTTGGACATTGTTGCCCGGTCCCTGTACTCAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538171.5
CDS CAA 72 bp ACGACTATGTCCGTCTCCACAGAGATCAGCTTCTTCTaGTCAAACTCACGAAGGTGCAGCAGGGTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: TTMSVSTEISFF*SNSRRCSRVSS
Trigger: TGAGCTCACCCTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGCTGATCTCTGTGGAGACGGACATAGTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CAA 72 bp CAAGTAAAATACACACGCCCACTGCCCTGGCCCACGTaGTCCGATGGAACTTTCTCCAACAACAGGAACGTT +
Preference number: 6 (lower is better)
Translates to: QVKYTRPLPWPT*SDGTFSNNRNV
Trigger: AACGTTCCTGTTGTTGGAGAAAGTTCCATCGGACAACGTGGGCCAGGGCAGTGGGCGTGTGTATTTTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS TCA 72 bp AGCCACACCGAGTACTTTTCCACCCCATTCTACACGTaGAGAGCTAAGTCACAGAGAGGTGACACATTAGCC +
Preference number: 6 (lower is better)
Translates to: SHTEYFSTPFYT*RAKSQRGDTLA
Trigger: GGCTAATGTGTCACCTCTCTGTGACTTAGCTCTTCACGTGTAGAATGGGGTGGAAAAGTACTCGGTGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575671.5
CDS CCA 72 bp GCCTCGCTGGAAAACTCCTTGCAGTCGGATTTCAGGTaGATGATGATTTTTGTCCCGGTTCTAACTCCCGAA +
Preference number: 6 (lower is better)
Translates to: ASLENSLQSDFR*MMIFVPVLTPE
Trigger: TTCGGGAGTTAGAACCGGGACAAAAATCATCATCCACCTGAAATCCGACTGCAAGGAGTTTTCCAGCGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS CCA 72 bp CAAAGCAGAAGAGAACCTCTGTGTCTTTCTTCTTCATaGCCTCATAGTAGGGTGAGTGCTCTGCCAGGTGAC +
Preference number: 6 (lower is better)
Translates to: QSRREPLCLSSS*PHSRVSALPGD
Trigger: GTCACCTGGCAGAGCACTCACCCTACTATGAGGCCATGAAGAAGAAAGACACAGAGGTTCTCTTCTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CAA 72 bp CACTCGAGCCTAGGCGACAGCACGACTAATGCAGTTTaGATGTGGGGACACTTCATAGACGAAGGATTCTTC +
Preference number: 6 (lower is better)
Translates to: HSSLGDSTTNAV*MWGHFIDEGFF
Trigger: GAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTAGTCGTGCTGTCGCCTAGGCTCGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS TCA 72 bp TGTTCATCCGCCTTCCATTCAAGTACAAGGGGAAGCTaGCGAAGTTGCTGTACTTCGTTACCACATCTCGCA +
Preference number: 6 (lower is better)
Translates to: CSSAFHSSTRGS*RSCCTSLPHLA
Trigger: TGCGAGATGTGGTAACGAAGTACAGCAACTTCGTCAGCTTCCCCTTGTACTTGAATGGAAGGCGGATGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000570514.5
ENST00000573872.5
ENST00000574175.1
ENST00000575671.5
ENST00000575854.5
ENST00000576335.5
CDS TCA 72 bp GCTTCTTCTTGTCAAACTCACGAAGGTGCAGCAGGGTaGGCTCATCAAACTGCTCAAAGCAGAAGAGAACCT +
Preference number: 6 (lower is better)
Translates to: ASSCQTHEGAAG*AHQTAQSRREP
Trigger: AGGTTCTCTTCTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS GCA 72 bp ACAGAGATCAGCTTCTTCTTGTCAAACTCACGAAGGTaGAGCAGGGTGAGCTCATCAAACTGCTCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: TEISFFLSNSRR*SRVSSSNCSKQ
Trigger: CTGCTTTGAGCAGTTTGATGAGCTCACCCTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGCTGATCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246957.10
ENST00000538171.5
ENST00000575671.5
CDS CAA 90 bp GCATCTCTGCACTCGAGCCTAGGCGACAGCACGACTAATGCAGTTTaGATGTGGGGACACTTCATAGACGAAGGATTCTTCACATTTCAA +
Preference number: 6 (lower is better)
Translates to: ASLHSSLGDSTTNAV*MWGHFIDEGFFTFQ
Trigger: TTGAAATGTGAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTAGTCGTGCTGTCGCCTAGGCTCGAGTGCAGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570403.1
CDS CAA 90 bp GGGCTGTGGTCCTCCGAGGACACAGAATTGGTTTTCAATGCAGTTTaGATGTGGGGACACTTCATAGACGAAGGATTCTTCACATTTCAA +
Preference number: 6 (lower is better)
Translates to: GLWSSEDTELVFNAV*MWGHFIDEGFFTFQ
Trigger: TTGAAATGTGAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTGAAAACCAATTCTGTGTCCTCGGAGGACCACAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS CAA 72 bp TCCTCCGAGGACACAGAATTGGTTTTCAATGCAGTTTaGATGTGGGGACACTTCATAGACGAAGGATTCTTC +
Preference number: 6 (lower is better)
Translates to: SSEDTELVFNAV*MWGHFIDEGFF
Trigger: GAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTGAAAACCAATTCTGTGTCCTCGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5
CDS CCA 72 bp GAGGACACAGAATTGGTTTTCAATGCAGTTTTGATGTaGGGACACTTCATAGACGAAGGATTCTTCACATTT +
Preference number: 6 (lower is better)
Translates to: EDTELVFNAVLM*GHFIDEGFFTF
Trigger: AAATGTGAAGAATCCTTCGTCTATGAAGTGTCCCCACATCAAAACTGCATTGAAAACCAATTCTGTGTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571804.5