RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000065308

Ensembl transcript IDs: ENST00000182527.4

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATAAACCCTTAGCACACCCGTCCACTGGGAAGCAGAGCCTAAGCTaGCCCCGGCCACTGGGCTGGTGGGACCACATCCAAGGCATGAAG +
Preference number: 1 (lower is better)
Translates to: NKPLAHPSTGKQSLS*PRPLGWWDHIQGMK
Trigger: CTTCATGCCTTGGATGTGGTCCCACCAGCCCAGTGGCCGGGGTCAGCTTAGGCTCTGCTTCCCAGTGGACGGGTGTGCTAAGGGTTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CGACTCCACTGTGGGTTCTGCCACCATTACCTTTCTGGAGGTGCCTaGTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGTGGGAAGACG +
Preference number: 1 (lower is better)
Translates to: RLHCGFCHHYLSGGA*CAVCSALALSSGKT
Trigger: CGTCTTCCCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CTGGGACTGCTGGAGAAAGGCCTAGGTCGACTCCACTGTGGGTTCTaGCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCT +
Preference number: 1 (lower is better)
Translates to: LGLLEKGLGRLHCGF*HHYLSGGACCAVCS
Trigger: AGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCTAGGCCTTTCTCCAGCAGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp GTGGGACCACATCCAAGGCATGAAGTACTGGCAGCACGGGGAGCTTaGAAGAGACAGGGACATGAAGTTGTGGCGTCTCTGGCACGCAAG +
Preference number: 1 (lower is better)
Translates to: VGPHPRHEVLAARGA*KRQGHEVVASLARK
Trigger: CTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTGCCAGTACTTCATGCCTTGGATGTGGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp AGGCCTAGGTCGACTCCACTGTGGGTTCTGCCACCATTACCTTTCTaGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAG +
Preference number: 1 (lower is better)
Translates to: RPRSTPLWVLPPLPF*RCLLRSLLCSRSKQ
Trigger: CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCTAGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp AGGTCGACTCCACTGTGGGTTCTGCCACCATTACCTTTCTGGAGGTaGCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGTGGGAA +
Preference number: 1 (lower is better)
Translates to: RSTPLWVLPPLPFWR*LLRSLLCSRSKQWE
Trigger: TTCCCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp CACGGGGAGCTTGCAAGAGACAGGGACATGAAGTTGTGGCGTCTCTaGCACGCAAGTGTCCTGGGACAGAGCAATGGAAACCTACAGGCA +
Preference number: 1 (lower is better)
Translates to: HGELARDRDMKLWRL*HASVLGQSNGNLQA
Trigger: TGCCTGTAGGTTTCCATTGCTCTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp TACTGGCAGCACGGGGAGCTTGCAAGAGACAGGGACATGAAGTTGTaGCGTCTCTGGCACGCAAGTGTCCTGGGACAGAGCAATGGAAAC +
Preference number: 1 (lower is better)
Translates to: YWQHGELARDRDMKL*RLWHASVLGQSNGN
Trigger: GTTTCCATTGCTCTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTGCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp AAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCTGGCTCTGGAGGTaGGGACCAGCCTATCTCAGGCAGGTATATGAACTGCTGTTTGGT +
Preference number: 1 (lower is better)
Translates to: KVVSLAPDGAGWLWR*GPAYLRQVYELLFG
Trigger: ACCAAACAGCAGTTCATATACCTGCCTGAGATAGGCTGGTCCTCACCTCCAGAGCCAGCCAGCCCCGTCAGGGGCCAAACTTACTACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp CTCAACAGTTTAACCTGGACTCACCTGAGAGAGGCCTCCTGCATGTaGAGCCCTGCCAATGACACAGCCTGGAGAGCACCTAGGATGGGT +
Preference number: 1 (lower is better)
Translates to: LNSLTWTHLREASCM*SPANDTAWRAPRMG
Trigger: ACCCATCCTAGGTGCTCTCCAGGCTGTGTCATTGGCAGGGCTTCACATGCAGGAGGCCTCTCTCAGGTGAGTCCAGGTTAAACTGTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp TGCCGTCGAGCCCTGGCAACTGGGGGCTGGCCACGGAGTACAAGTTaGAAACCACACAGCAAAGTAAGGCACTTATTCTCACACACAGGC +
Preference number: 1 (lower is better)
Translates to: CRRALATGGWPRSTS*KPHSKVRHLFSHTG
Trigger: GCCTGTGTGTGAGAATAAGTGCCTTACTTTGCTGTGTGGTTTTCAACTTGTACTCCGTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp GCCACAGTTGCTGGGGTAGGTTTACGTCTTTTCTCCTGCTCTTGGTaGATGGTGCTGAGCTCTCAAGCTTGGAGGTGTCTGGCAGAGCCT +
Preference number: 1 (lower is better)
Translates to: ATVAGVGLRLFSCSW*MVLSSQAWRCLAEP
Trigger: AGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTACCCCAGCAACTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp GAGGCCACAGTTGCTGGGGTAGGTTTACGTCTTTTCTCCTGCTCTTaGTGCATGGTGCTGAGCTCTCAAGCTTGGAGGTGTCTGGCAGAG +
Preference number: 1 (lower is better)
Translates to: EATVAGVGLRLFSCS*CMVLSSQAWRCLAE
Trigger: CTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTACCCCAGCAACTGTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp TATACTGAGGTATGGTGTCCTTGGCTGCCGTCGAGCCCTGGCAACTaGGGGCTGGCCACGGAGTACAAGTTGAAAACCACACAGCAAAGT +
Preference number: 1 (lower is better)
Translates to: YTEVWCPWLPSSPGN*GLATEYKLKTTQQS
Trigger: ACTTTGCTGTGTGGTTTTCAACTTGTACTCCGTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATACCTCAGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp AGGCATGAGAATGAGGGTTGCTTGATGGCAAGATTTCAGCTGCTCTaGTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGG +
Preference number: 1 (lower is better)
Translates to: RHENEGCLMARFQLL*SHYLSSNWHNAGTW
Trigger: CCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp TGTCGAGAGGCCACAGTTGCTGGGGTAGGTTTACGTCTTTTCTCCTaGTCTTGGTGCATGGTGCTGAGCTCTCAAGCTTGGAGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: CREATVAGVGLRLFS*SWCMVLSSQAWRCL
Trigger: CAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTACCCCAGCAACTGTGGCCTCTCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp TATTTCAGCTCTGGCAACACAGTCTGTGTCAACCTGCCACAGACTTaGCTCTGCTGTGAAATAAACGTGCCAGGGAGGGTGGCAGGGGGA +
Preference number: 1 (lower is better)
Translates to: YFSSGNTVCVNLPQT*LCCEINVPGRVAGG
Trigger: TCCCCCTGCCACCCTCCCTGGCACGTTTATTTCACAGCAGAGCCAAGTCTGTGGCAGGTTGACACAGACTGTGTTGCCAGAGCTGAAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp CGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTTaGAGGTGTCTGGCAGAGCCTTCACAAATGGCTTGGCACTTTGGG +
Preference number: 1 (lower is better)
Translates to: RLFSCSWCMVLSSQA*RCLAEPSQMAWHFG
Trigger: CCCAAAGTGCCAAGCCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp AGGCGCACGCACGCAATCTGCTTGGGACAAAAAGTCTACAGGGGTTaGCAAGCACGAAAGGCTACATGGAGACTGCAAATCCCAATGCTC +
Preference number: 1 (lower is better)
Translates to: RRTHAICLGQKVYRG*QARKATWRLQIPML
Trigger: GAGCATTGGGATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp ACTGTCACAATCCGTGTCCCTTTTATATATAACTATACTGAGGTATaGTGTCCTTGGCTGCCGTCGAGCCCTGGCAACTGGGGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: TVTIRVPFIYNYTEV*CPWLPSSPGNWGLA
Trigger: GGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATACCTCAGTATAGTTATATATAAAAGGGACACGGATTGTGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp GCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTaGGTTGTCACGTCCCAAAGCCAAATGCCTTGGCATTTACAACGA +
Preference number: 1 (lower is better)
Translates to: ARVTGPNRVHTILLD*VVTSQSQMPWHLQR
Trigger: TCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCAGCATaGCATACATATCTGTTGAAGCCACAACTCAACAGTTTAACCTGG +
Preference number: 1 (lower is better)
Translates to: LSSNWHNAGTWHIPA*HTYLLKPQLNSLTW
Trigger: CCAGGTTAAACTGTTGAGTTGTGGCTTCAACAGATATGTATGGCATGCTGGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp GGGACAGAGCAATGGAAACCTACAGGCATGAGAATGAGGGTTGCTTaGTGGCAAGATTTCAGCTGCTCTGCTCACACTACCTCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: GTEQWKPTGMRMRVA*WQDFSCSAHTTSPA
Trigger: TGCTGGAGAGGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCTGTAGGTTTCCATTGCTCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp CTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTaGACAAGTAGCTCTAGAGTGCTTTTAGGCAGAGTGACGGTGATG +
Preference number: 1 (lower is better)
Translates to: LHLRLLLRKISFLST*TSSSRVLLGRVTVM
Trigger: CATCACCGTCACTCTGCCTAAAAGCACTCTAGAGCTACTTGTTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp TCCTGGGACAGAGCAATGGAAACCTACAGGCATGAGAATGAGGGTTaGTTGATGGCAAGATTTCAGCTGCTCTGCTCACACTACCTCTCC +
Preference number: 1 (lower is better)
Translates to: SWDRAMETYRHENEG*LMARFQLLCSHYLS
Trigger: GGAGAGGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCTGTAGGTTTCCATTGCTCTGTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CAAAGTAAGGCACTTATTCTCACACACAGGCGCACGCACGCAATCTaGTTGGGACAAAAAGTCTACAGGGGTTGCCAAGCACGAAAGGCT +
Preference number: 1 (lower is better)
Translates to: QSKALILTHRRTHAI*LGQKVYRGCQARKA
Trigger: AGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCTGTGTGTGAGAATAAGTGCCTTACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp GTAAGGCACTTATTCTCACACACAGGCGCACGCACGCAATCTGCTTaGGACAAAAAGTCTACAGGGGTTGCCAAGCACGAAAGGCTACAT +
Preference number: 1 (lower is better)
Translates to: VRHLFSHTGARTQSA*DKKSTGVAKHERLH
Trigger: ATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCTGTGTGTGAGAATAAGTGCCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp CCTTTGCAAGGTGGAGCTAACACTCATGTGAGTAGTGGGGTAGAGTaGGAAGTTGGTAAAGTCTTCCTCACTGGGACAACCTTGAGCTGG +
Preference number: 1 (lower is better)
Translates to: PLQGGANTHVSSGVE*EVGKVFLTGTTLSW
Trigger: CCAGCTCAAGGTTGTCCCAGTGAGGAAGACTTTACCAACTTCTCACTCTACCCCACTACTCACATGAGTGTTAGCTCCACCTTGCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp GCTCGTCTTTATAGCTCTGCCACTCCAGGGAACTCCATAAAAGAATaGGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAG +
Preference number: 1 (lower is better)
Translates to: ARLYSSATPGNSIKE*GSFHWGELVFSLCK
Trigger: CTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCATTCTTTTATGGAGTTCCCTGGAGTGGCAGAGCTATAAAGACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp TTCACACCATCCTTCTGGATTGAGTTGTCACGTCCCAAAGCCAAATaGCTTGGCATTTACAACGAGCAGTGGCTGCTGTGCCTCAAGATG +
Preference number: 1 (lower is better)
Translates to: FTPSFWIELSRPKAK*LGIYNEQWLLCLKM
Trigger: CATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp GTGGCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTaGCCTTTTACCAACGTTTCTGCTGTGCAGCCCAGAGAAGTGTCA +
Preference number: 1 (lower is better)
Translates to: VAKGSHIRSAVLKPN*PFTNVSAVQPREVS
Trigger: TGACACTTCTCTGGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp TTGGGACAAAAAGTCTACAGGGGTTGCCAAGCACGAAAGGCTACATaGAGACTGCAAATCCCAATGCTCGTCTTTATAGCTCTGCCACTC +
Preference number: 1 (lower is better)
Translates to: LGQKVYRGCQARKAT*RLQIPMLVFIALPL
Trigger: GAGTGGCAGAGCTATAAAGACGAGCATTGGGATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp GAAACAGCGGTATTATATTTACTGTCACAGCTAGACCCTATCAGGTaGACAGGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCT +
Preference number: 1 (lower is better)
Translates to: ETAVLYLLSQLDPIR*TGLSTCGCCFAKYP
Trigger: AGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCCTGTTCACCTGATAGGGTCTAGCTGTGACAGTAAATATAATACCGCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CCCAAAGCCAAATGCCTTGGCATTTACAACGAGCAGTGGCTGCTGTaGCTCAAGATGGTACATGCAGAACTGGAATCATATATCTCGTCA +
Preference number: 1 (lower is better)
Translates to: PKAKCLGIYNEQWLL*LKMVHAELESYISS
Trigger: TGACGAGATATATGATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp CACGTCCCAAAGCCAAATGCCTTGGCATTTACAACGAGCAGTGGCTaGTGTGCCTCAAGATGGTACATGCAGAACTGGAATCATATATCT +
Preference number: 1 (lower is better)
Translates to: HVPKPNALAFTTSSG*CASRWYMQNWNHIS
Trigger: AGATATATGATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp TTGTCACGTCCCAAAGCCAAATGCCTTGGCATTTACAACGAGCAGTaGCTGCTGTGCCTCAAGATGGTACATGCAGAACTGGAATCATAT +
Preference number: 1 (lower is better)
Translates to: LSRPKAKCLGIYNEQ*LLCLKMVHAELESY
Trigger: ATATGATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp CTAGGCACAAGGGGGTCGGCAACCCACTTCCAATTAAAGCATCCATaGAAGATAAGAATTTTGTTGTGGAATCCTGGGAGGAGATGCACT +
Preference number: 1 (lower is better)
Translates to: LGTRGSATHFQLKHP*KIRILLWNPGRRCT
Trigger: AGTGCATCTCCTCCCAGGATTCCACAACAAAATTCTTATCTTCCATGGATGCTTTAATTGGAAGTGGGTTGCCGACCCCCTTGTGCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 90 bp GTCTATTGGGGTTTCTTAAATGTTGGGAAGTTATGCCTTGGGACATaGACAGACAAGTTTCTCAGCAACCATTTCGGTCTGGTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: VYWGFLNVGKLCLGT*TDKFLSNHFGLVAQ
Trigger: CTGGGCCACCAGACCGAAATGGTTGCTGAGAAACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAACATTTAAGAAACCCCAATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp ACAACGAGCAGTGGCTGCTGTGCCTCAAGATGGTACATGCAGAACTaGAATCATATATCTCGTCAGTTAATCAGCACCAAGGAGATTATG +
Preference number: 1 (lower is better)
Translates to: TTSSGCCASRWYMQN*NHISRQLISTKEIM
Trigger: CATAATCTCCTTGGTGCTGATTAACTGACGAGATATATGATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp CAGAGGTGTCTATTGGGGTTTCTTAAATGTTGGGAAGTTATGCCTTaGGACATGAACAGACAAGTTTCTCAGCAACCATTTCGGTCTGGT +
Preference number: 1 (lower is better)
Translates to: QRCLLGFLKCWEVMP*DMNRQVSQQPFRSG
Trigger: ACCAGACCGAAATGGTTGCTGAGAAACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAACATTTAAGAAACCCCAATAGACACCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 90 bp AACACACCACAGACCCTAATCCTGGGCAGCGGGGTTAGAAACAAATaGGGTGAAACTGTCACAATCCGTGTCCCTTTTATATATAACTAT +
Preference number: 1 (lower is better)
Translates to: NTPQTLILGSGVRNK*GETVTIRVPFIYNY
Trigger: ATAGTTATATATAAAAGGGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGATTAGGGTCTGTGGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 90 bp AGAGGAGAGAGCTTAGAACATCAAGAATTGAAGTTTGTGCACTTGTaGCATAGGCCCTTAAGCAAAAGAATTAGTTATGTGCAGACTTCC +
Preference number: 1 (lower is better)
Translates to: RGESLEHQELKFVHL*HRPLSKRISYVQTS
Trigger: GGAAGTCTGCACATAACTAATTCTTTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCTCTCTCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCGGCAGGGAGGGGGCCTaGGCTCCTTGCCCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPGREGA*APCPLL
Trigger: GAGCAGGGGGCAAGGAGCCCAGGCCCCCTCCCTGCC...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGGGGCTCCTTGCCCCCTaGTCGGCCCCCACCAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQGLLAP*SAPTKR
Trigger: CCTCTTGGTGGGGGCCGAGCAGGGGGCAAGGAGCCC...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCGTGAAGCCCTGCCAATaGCACAGCCTGGAGAGCACC +
Preference number: 2 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTVKPCQ*HSLEST
Trigger: GGTGCTCTCCAGGCTGTGTCATTGGCAGGGCTTCAC...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCTCTGGAGGTGCCTGCTaGGCAGTTTGCTCTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPSGGAC*AVCSAL
Trigger: GAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGA...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGAGCAAGCAGAAAGGTaGCAGCCATGGGCGCCTGGC +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVEQAER*QPWAPG
Trigger: GCCAGGCGCCCATGGCTGGCACCTTTCTGCTTGCTC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAAGAGCGACAGCAGGCTaGCTTCCAATCCGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRERATAG*LPIRGQ
Trigger: CTGGCCGCGGATTGGAAGCCAGCCTGCTGTCGCTCT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCGCTGCCGTCGAGCCCTaGCAACTGGGGGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSAAVEP*QLGAGH
Trigger: GTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGC...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAGCTCGGAAGGCAGAGTaGGGGAGGAAGAGCACTCCA +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREARKAE*GRKSTP
Trigger: TGGAGTGCTCTTCCTCCCTCACTCTGCCTTCCGAGC...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCGAAAGGTGCCAGCCATaGGCGCCTGGCGTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGERCQP*APGVPE
Trigger: TTCTGGAACGCCAGGCGCCCATGGCTGGCACCTTTC...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp AAGTACTGGCAGCACGGGGAGCTTGCAAGAGACAGGGACATGAAGTaGTGGCGTCTCTGGCACGCAAGTGTCCTGGGACAGAGCAATGGA +
Preference number: 2 (lower is better)
Translates to: KYWQHGELARDRDMK*WRLWHASVLGQSNG
Trigger: TCCATTGCTCTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTGCCAGTACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAACTCCTAACCTCAGGTaGTCTGCCCACCTCGACCTC +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRETPNLR*SAHLDL
Trigger: GAGGTCGAGGTGGGCAGATCACCTGAGGTTAGGAGT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCTGACCGGCAGGCCCTaGGGGACCGAAGGACAGGAC +
Preference number: 2 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTLTGRP*GTEGQD
Trigger: GTCCTGTCCTTCGGTCCCCCAGGGCCTGCCGGTCAG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAAGCACACCCGTCCACTaGGAAGCAGAGCCTAAGCTG +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRESTPVH*EAEPKL
Trigger: CAGCTTAGGCTCTGCTTCCCAGTGGACGGGTGTGCT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTCAGGTTTCGGCTGTTTaGGACGGAGCATCACAGGCA +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVQVSAV*DGASQA
Trigger: TGCCTGTGATGCTCCGTCTCAAACAGCCGAAACCTG...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCTCTGTCAGGGCTGTTTaGCTAAAGTGGCTAAGGGAT +
Preference number: 2 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPSVRAV*LKWLRD
Trigger: ATCCCTTAGCCACTTTAGTCAAACAGCCCTGACAGA...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGACCGAAGGACAGGACTaGAATCTTAGCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQTEGQD*NLSSPP
Trigger: GGGAGGGGAGCTAAGATTGCAGTCCTGTCCTTCGGT...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTCCAGCCATGGGCGCCTaGCGTTCCAGAAAAGCCAGC +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSPAMGA*RSRKAS
Trigger: GCTGGCTTTTCTGGAACGCCAGGCGCCCATGGCTGG...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAACCACCATTACCTTTCTaGAGGTGCCTGCTGCGCAGT +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREPPLPF*RCLLRS
Trigger: ACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAACAAGGCATGAAGTACTaGCAGCACGGGGAGCTTGCA +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREQGMKY*QHGELA
Trigger: TGCAAGCTCCCCGTGCTGCCAGTACTTCATGCCTTG...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATGCTGACCCCGGCCACTaGGCTGGTGGGACCACATCC +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHADPGH*AGGTTS
Trigger: GGATGTGGTCCCACCAGCCCAGTGGCCGGGGTCAGC...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGGGTAGCACAGATCCTTaGTCCACCAGCGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQGSTDP*STSATS
Trigger: GGAGGTGGCGCTGGTGGACCAAGGATCTGTGCTACC...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTGCACCAAGGAGATTATaGTCCGAGATGGCCGCTCTC +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAAPRRL*SEMAAL
Trigger: GAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGC...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCCCAAGTGACCCTCCCTaGACACCAAGGGACCAGCAT +
Preference number: 2 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGPSDPP*TPRDQH
Trigger: ATGCTGGTCCCTTGGTGTTCAGGGAGGGTCACTTGG...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGGCACCAAAAGGACTTaGAGGCCTTCTCTTCAGGTG +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVGTKRT*RPSLQV
Trigger: CACCTGAAGAGAAGGCCTCCAAGTCCTTTTGGTGCC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp ACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTaGGAGGTGTCTGGCAGAGCCTTCACAAATGGCTTGGCACTTTGG +
Preference number: 2 (lower is better)
Translates to: TSFLLLLVHGAELSS*EVSGRAFTNGLALW
Trigger: CCAAAGTGCCAAGCCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp CAGGCGCACGCACGCAATCTGCTTGGGACAAAAAGTCTACAGGGGTaGCCAAGCACGAAAGGCTACATGGAGACTGCAAATCCCAATGCT +
Preference number: 2 (lower is better)
Translates to: QAHARNLLGTKSLQG*PSTKGYMETANPNA
Trigger: AGCATTGGGATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTTCTTGCCCATCCACATaGGGACCACCAAGGGCCTAC +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSSCPST*GPPRAY
Trigger: GTAGGCCCTTGGTGGTCCTCATGTGGATGGGCAAGA...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATGGCTGGCTCTGGAGGTaGGGACCAGCCTATCTCAGG +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHGWLWR*GPAYLR
Trigger: CCTGAGATAGGCTGGTCCTCACCTCCAGAGCCAGCC...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTGAACAGCGGTCCAAGTaGCCCTCCCTGAACACCAAG +
Preference number: 2 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAEQRSK*PSLNTK
Trigger: CTTGGTGTTCAGGGAGGGTCACTTGGACCGCTGTTC...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGAGGCCTCCTGCATGTaGAGCCCTGCCAATGACACA +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSEASCM*SPANDT
Trigger: TGTGTCATTGGCAGGGCTTCACATGCAGGAGGCCTC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGCAAGAGACAGGGACATaGAGTTGTGGCGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQQETGT*SCGVSG
Trigger: GCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTG...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTGACTTGGCTCTGCTGTaGAATAAACGTGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGADLALL*NKRARE
Trigger: CTCCCTGGCACGTTTATTTCACAGCAGAGCCAAGTC...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGCTTTCTGGAGGTGCCTaGTGCGCAGTTTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQLSGGA*CAVCSA
Trigger: AGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAG...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCCAACGTTTCTGCTGTaGAGCCCAGAGAAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSPTFLL*SPEKCQ
Trigger: CTGACACTTCTCTGGGCTGCACAGCAGAAACGTTGG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCTTTTACCAACGTTTCTaGTGTGCAGCCCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTFYQRF*CAAQRS
Trigger: ACTTCTCTGGGCTGCACAGCAGAAACGTTGGTAAAA...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCTCGAGAGGCCACAGTTaGTGGGGTAGGTTTACGTCT +
Preference number: 2 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSSRGHS*WGRFTS
Trigger: AGACGTAAACCTACCCCAGCAACTGTGGCCTCTCGA...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCTATGGTGTCCTTGGCTaGCGTCGAGCCCTGGCAACT +
Preference number: 2 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSYGVLG*RRALAT
Trigger: AGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATA...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGATTATGATCCGAGATaGCCGCTCTCTTCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVDYDPR*PLSSCP
Trigger: TGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTCTCAACAGTTTAACCTaGACTCACCTGAGAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVLNSLT*THLREA
Trigger: GGCCTCTCTCAGGTGAGTCCAGGTTAAACTGTTGAG...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTCCTTCACAAATGGCTTaGCACTTTGGGGCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAPSQMA*HFGAGE
Trigger: CTCTCCTGCCCCAAAGTGCCAAGCCATTTGTGAAGG...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp GAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTaGTCACGTCCCAAAGCCAAATGCCTTGGCATTTACAACGAGCAG +
Preference number: 2 (lower is better)
Translates to: ESRDPTEFTPSFWIE*SRPKAKCLGIYNEQ
Trigger: CTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp AGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATaGAGTTGTCACGTCCCAAAGCCAAATGCCTTGGCATTTACAACG +
Preference number: 2 (lower is better)
Translates to: SSSHGTQPSSHHPSG*SCHVPKPNALAFTT
Trigger: CGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp GTGACCCTCCCTGAACACCAAGGGACCAGCATGGGGCTGAAGCCCTaGAGACTTAGTGTTTCTGCAGCTAGAGATGAAGTCAAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: VTLPEHQGTSMGLKP*RLSVSAARDEVKVV
Trigger: TACTACCTTGACTTCATCTCTAGCTGCAGAAACACTAAGTCTCAAGGGCTTCAGCCCCATGCTGGTCCCTTGGTGTTCAGGGAGGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAAGCTTGGAGGTGTCTaGCAGAGCCTTCACAAATGG +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAKLGGV*QSLHKW
Trigger: CCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGACCATTTCGGTCTGGTaGCCCAGACACACATGGGAT +
Preference number: 2 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQTISVW*PRHTWD
Trigger: ATCCCATGTGTGTCTGGGCCACCAGACCGAAATGGT...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp CACCATCCTTCTGGATTGAGTTGTCACGTCCCAAAGCCAAATGCCTaGGCATTTACAACGAGCAGTGGCTGCTGTGCCTCAAGATGGTAC +
Preference number: 2 (lower is better)
Translates to: HHPSGLSCHVPKPNA*AFTTSSGCCASRWY
Trigger: GTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp CACAACGCAGGCACCTGGCACATCCCAGCATGCCATACATATCTGTaGAAGCCACAACTCAACAGTTTAACCTGGACTCACCTGAGAGAG +
Preference number: 2 (lower is better)
Translates to: HNAGTWHIPACHTYL*KPQLNSLTWTHLRE
Trigger: CTCTCTCAGGTGAGTCCAGGTTAAACTGTTGAGTTGTGGCTTCAACAGATATGTATGGCATGCTGGGATGTGCCAGGTGCCTGCGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp TGGGACAGAGCAATGGAAACCTACAGGCATGAGAATGAGGGTTGCTaGATGGCAAGATTTCAGCTGCTCTGCTCACACTACCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: WDRAMETYRHENEGC*MARFQLLCSHYLSS
Trigger: GCTGGAGAGGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCTGTAGGTTTCCATTGCTCTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp AGTAAGGCACTTATTCTCACACACAGGCGCACGCACGCAATCTGCTaGGGACAAAAAGTCTACAGGGGTTGCCAAGCACGAAAGGCTACA +
Preference number: 2 (lower is better)
Translates to: SKALILTHRRTHAIC*GQKVYRGCQARKAT
Trigger: TGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCTGTGTGTGAGAATAAGTGCCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCGAGCAGTGGCTGCTGTaGCTCAAGATGGTACATGCA +
Preference number: 2 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSEQWLL*LKMVHA
Trigger: TGCATGTACCATCTTGAGGCACAGCAGCCACTGCTC...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTACAACGAGCAGTGGCTaGTGTGCCTCAAGATGGTAC +
Preference number: 2 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQATTSSG*CASRWY
Trigger: GTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAGAGCTCGAACAGTTCTaGAACAGTCAGACATGTATG +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREELEQF*NSQTCM
Trigger: CATACATGTCTGACTGTTGCAGAACTGTTCGAGCTC...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTTTCACACCATCCTTCTaGATTGAGTTGTCACGTCCC +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAFTPSF*IELSRP
Trigger: GGGACGTGACAACTCAATCCAGAAGGATGGTGTGAA...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCAGGCTGGAGTGCCATaGTACAATCTCCGCTCACTG +
Preference number: 2 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTQAGVP*YNLRSL
Trigger: CAGTGAGCGGAGATTGTACCATGGCACTCCAGCCTG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCACAAGGGCGGCCAGATaGACAGCGGTCCAAGTGACC +
Preference number: 2 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSTRAAR*TAVQVT
Trigger: GGTCACTTGGACCGCTGTTCATCTGGCCGCCCTTGT...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGCCATACATATCTGTTaGAGCCACAACTCAACAGTT +
Preference number: 2 (lower is better)
Translates to: RSREGSVNVARAEVSIGVAIHIC*SHNSTV
Trigger: AACTGTTGAGTTGTGGCTTCAACAGATATGTATGGC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAGCACTCCATTGTCTTaGCTCAAAAGCTTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGASTPLS*LKSFQH
Trigger: GTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGCCTGCTGCGCAGTTTaGTCTGCTCTCGCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: SNNPENPLLRKGTISSEGACCAV*SALALS
Trigger: GCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTCCTGGGACAGAGCAATaGAAACCTACAGGCATGAGA +
Preference number: 2 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAPGTEQ*KPTGMR
Trigger: TCTCATGCCTGTAGGTTTCCATTGCTCTGTCCCAGG...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACGGCCACTGGGCTGGTaGGACCACATCCAAGGCATG +
Preference number: 2 (lower is better)
Translates to: QARVENRHFVHICIISCSRPLGW*DHIQGM
Trigger: CATGCCTTGGATGTGGTCCCACCAGCCCAGTGGCCG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCCTTTTCTCCTGCTCTTaGTGCATGGTGCTGAGCTCT +
Preference number: 2 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSLFSCS*CMVLSS
Trigger: AGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAG...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTACCATCCTTCTGGATTaGGTTGTCACGTCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTTILLD*VVTSQS
Trigger: GCTTTGGGACGTGACAACTCAATCCAGAAGGATGGT...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTTATCGTAGAGAGGGATaGAGGCCTCCAATGGCGTTA +
Preference number: 2 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTYRREG*RPPMAL
Trigger: TAACGCCATTGGAGGCCTTCATCCCTCTCTACGATA...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCTGCGCAGTTTGCTCTaGTCTCGCTCTAAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: SNNPENPLLRKGTISSEGLRSLL*SRSKQW
Trigger: CCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATCTCGACCTCCCAAAGTaGTGGGATAACAGGCGTAAG +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHLDLPK*WDNRRK
Trigger: CTTACGCCTGTTATCCCAGCACTTTGGGAGGTCGAG...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCAACTCCCATCATCACTaGACCTCCAAGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SNNPENPLLRKGTISSEGNSHHH*TSKEGS
Trigger: GCTCCCCTCCTTGGAGGTGCAGTGATGATGGGAGTT...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATTGGCTGAAAAAGCAATaGCGACTGGGACTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHWLKKQ*RLGLLE
Trigger: CTCCAGCAGTCCCAGTCGCCATTGCTTTTTCAGCCA...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCTTGAATGCTTGTGAATaGCTGAAAAAGCAATGGCGA +
Preference number: 2 (lower is better)
Translates to: EGARKAPIIYPESDSQSVLNACE*LKKQWR
Trigger: TCGCCATTGCTTTTTCAGCCATTCACAAGCATTCAA...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATCAGAGCCTTCACAAATaGCTTGGCACTTTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHQSLHK*LGTLGQ
Trigger: CTGCCCCAAAGTGCCAAGCCATTTGTGAAGGCTCTG...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTTCCTGCTGTGTCTGTTaGCTTCCCCACAAATGTAAG +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSSCCVC*LPHKCK
Trigger: CTTACATTTGTGGGGAAGCCAACAGACACAGCAGGA...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAATAAGAATTTTGTTGTaGAATCCTGGGAGGAGATGC +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREIRILL*NPGRRC
Trigger: GCATCTCCTCCCAGGATTCCACAACAAAATTCTTAT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp TGTTTGACTAAAGTGGCTAAGGGATCCCATATCAGGTCTGCTGTGTaGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: CLTKVAKGSHIRSAV*KPNCPFTNVSAVQP
Trigger: GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGCCACTTTAGTCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATCATCTACCCAGAGAGTaGCTCTCAGTCAGTCATGGT +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHHLPRE*LSVSHG
Trigger: ACCATGACTGACTGAGAGTCACTCTCTGGGTAGATG...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTGTGATGTCAGAAAGATaGCCAGTATTCCAAATGACA +
Preference number: 2 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAVMSER*PVFQMT
Trigger: TGTCATTTGGAATACTGGTCATCTTTCTGACATCAC...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAATCAGTCATGGTTTCATaGAGTCTAAAATGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRESVMVS*SLKCCS
Trigger: ACTACAGCATTTTAGACTGCATGAAACCATGACTGA...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCGTGTTGAAACCAAACTaGCCTTTTACCAACGTTTCT +
Preference number: 2 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSVLKPN*PFTNVS
Trigger: AGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACAC...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATAATCCTGGGAGGAGATaGACTCTTTCACCCAACCTC +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHNPGRR*TLSPNL
Trigger: GAGGTTGGGTGAAAGAGTGCATCTCCTCCCAGGATT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCGACCAGTATTCCAAATaGCACTACTATTCCTGCACC +
Preference number: 2 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTDQYSK*HYYSCT
Trigger: GGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTC...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCGTTTGGTTTCTACTGTaGTGTCAGAAAGATGACCAG +
Preference number: 2 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSVWFLL*CQKDDQ
Trigger: CTGGTCATCTTTCTGACATCACAGTAGAAACCAAAC...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATAGAATGAGGGTTGCTTaGTGGCAAGATTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHRMRVA*WQDFSC
Trigger: GCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR TCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACTTGGTGCATGGTGCTaGGCTCTCAAGCTTGGAGGT +
Preference number: 2 (lower is better)
Translates to: QARVENRHFVHICIISCSLGAWC*ALKLGG
Trigger: ACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATCCACAGACTTGGCTCTaGTGTGAAATAAACGTGCCA +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHPQTWL*CEINVP
Trigger: TGGCACGTTTATTTCACAGCAGAGCCAAGTCTGTGG...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGATTTACAACGAGCAGTaGCTGCTGTGCCTCAAGATG +
Preference number: 2 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVIYNEQ*LLCLKM
Trigger: CATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAAT...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGGGTTTCTTAAATGTTaGGAAGTTATGCCTTGGGAC +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSGFLKC*EVMPWD
Trigger: GTCCCAAGGCATAACTTCCCAACATTTAAGAAACCC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp TCGGCAACCCACTTCCAATTAAAGCATCCATGGAAGATAAGAATTTaGTTGTGGAATCCTGGGAGGAGATGCACTCTTTCACCCAACCTC +
Preference number: 2 (lower is better)
Translates to: SATHFQLKHPWKIRI*LWNPGRRCTLSPNL
Trigger: GAGGTTGGGTGAAAGAGTGCATCTCCTCCCAGGATTCCACAACAAAATTCTTATCTTCCATGGATGCTTTAATTGGAAGTGGGTTGCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATAGCTCTTCCCATTTCTaGAACCTTATCGTAGAGAGG +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHSSSHF*NLIVER
Trigger: CCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCATGAGAATGAGGGTTaGTTGATGGCAAGATTTCAG +
Preference number: 2 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTHENEG*LMARFQ
Trigger: CTGAAATCTTGCCATCAAGCAACCCTCATTCTCATG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACAGTCTGTGTCAACCTaGCACAGACTTGGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: QARVENRHFVHICIISCSQSVST*HRLGSA
Trigger: AGCAGAGCCAAGTCTGTGGCAGGTTGACACAGACTG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp TCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCCTGGTACATGCAGAACTaGAATCATATATCTCGTCAG +
Preference number: 2 (lower is better)
Translates to: SAVLKPNCPFTNVSAVQPWYMQN*NHISRQ
Trigger: CTGACGAGATATATGATTCCAGTTCTGCATGTACCA...GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGAATTATTTCAGCTCTaGCAACACAGTCTGTGTCAA +
Preference number: 2 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSELFQL*QHSLCQ
Trigger: TTGACACAGACTGTGTTGCCAGAGCTGAAATAATTC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCAAAGCCAAATGCCTTaGCATTTACAACGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: SNNPENPLLRKGTISSEGQSQMP*HLQRAV
Trigger: CACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp TTCAGCACTCCCTCTGTTAGAGGAGAGAGCTTAGAACATCAAGAATaGAAGTTTGTGCACTTGTGCCATAGGCCCTTAAGCAAAAGAATT +
Preference number: 2 (lower is better)
Translates to: FSTPSVRGESLEHQE*KFVHLCHRPLSKRI
Trigger: AATTCTTTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCTCTCTCCTCTAACAGAGGGAGTGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATAAAGAATTAGTTATGTaGAGACTTCCCTACCTCTCA +
Preference number: 2 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHKELVM*RLPYLS
Trigger: TGAGAGGTAGGGAAGTCTGCACATAACTAATTCTTT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 90 bp GTTAGAGGAGAGAGCTTAGAACATCAAGAATTGAAGTTTGTGCACTaGTGCCATAGGCCCTTAAGCAAAAGAATTAGTTATGTGCAGACT +
Preference number: 2 (lower is better)
Translates to: VRGESLEHQELKFVH*CHRPLSKRISYVQT
Trigger: AGTCTGCACATAACTAATTCTTTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCTCTCTCCTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GGGCCTACCAGCCCCAGGCTTCTGACCGGCAGGCCCTaGGGGACCGAAGGACAGGACTGCAATCTTAGCTCC +
Preference number: 3 (lower is better)
Translates to: GPTSPRLLTGRP*GTEGQDCNLSS
Trigger: GGAGCTAAGATTGCAGTCCTGTCCTTCGGTCCCCCAGGGCCTGCCGGTCAGAAGCCTGGGGCTGGTAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp ACTCAACAAGGGCGGCCAGATGAACAGCGGTCCAAGTaGCCCTCCCTGAACACCAAGGGACCAGCATGGGGC +
Preference number: 3 (lower is better)
Translates to: TQQGRPDEQRSK*PSLNTKGPAWG
Trigger: GCCCCATGCTGGTCCCTTGGTGTTCAGGGAGGGTCACTTGGACCGCTGTTCATCTGGCCGCCCTTGTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp ACTGGCAGCACGGGGAGCTTGCAAGAGACAGGGACATaGAGTTGTGGCGTCTCTGGCACGCAAGTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: TGSTGSLQETGT*SCGVSGTQVSW
Trigger: CCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CACGGGGAGCTTGCAAGAGACAGGGACATGAAGTTGTaGCGTCTCTGGCACGCAAGTGTCCTGGGACAGAGC +
Preference number: 3 (lower is better)
Translates to: HGELARDRDMKL*RLWHASVLGQS
Trigger: GCTCTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CTGGGCTGGTGGGACCACATCCAAGGCATGAAGTACTaGCAGCACGGGGAGCTTGCAAGAGACAGGGACATG +
Preference number: 3 (lower is better)
Translates to: LGWWDHIQGMKY*QHGELARDRDM
Trigger: CATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTGCCAGTACTTCATGCCTTGGATGTGGTCCCACCAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GTATGGTGTCCTTGGCTGCCGTCGAGCCCTGGCAACTaGGGGCTGGCCACGGAGTACAAGTTGAAAACCACA +
Preference number: 3 (lower is better)
Translates to: VWCPWLPSSPGN*GLATEYKLKTT
Trigger: TGTGGTTTTCAACTTGTACTCCGTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTaGTCTCGCTCTAAGCAGTGGGAAGACGTGTCCCCC +
Preference number: 3 (lower is better)
Translates to: LPFWRCLLRSLL*SRSKQWEDVSP
Trigger: GGGGGACACGTCTTCCCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp CTGGAGAAAGGCCTAGGTCGACTCCACTGTGGGTTCTaGCACCATTACCTTTCTGGAGGTGCCTGCTGCGCA +
Preference number: 3 (lower is better)
Translates to: LEKGLGRLHCGF*HHYLSGGACCA
Trigger: TGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCTAGGCCTTTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp TTTCAGCTGCTCTGCTCACACTACCTCTCCAGCAACTaGCACAACGCAGGCACCTGGCACATCCCAGCATGC +
Preference number: 3 (lower is better)
Translates to: FQLLCSHYLSSN*HNAGTWHIPAC
Trigger: GCATGCTGGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAGAGCAGCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAGACAGGGACATGAAGTaGTGGCGTCTCTGGCACGCA +
Preference number: 3 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREDRDMK*WRLWHA
Trigger: TGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTC...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp TTAACCTGGACTCACCTGAGAGAGGCCTCCTGCATGTaGAGCCCTGCCAATGACACAGCCTGGAGAGCACCT +
Preference number: 3 (lower is better)
Translates to: LTWTHLREASCM*SPANDTAWRAP
Trigger: AGGTGCTCTCCAGGCTGTGTCATTGGCAGGGCTTCACATGCAGGAGGCCTCTCTCAGGTGAGTCCAGGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCACAGGTTTCGGCTGTTaGAGACGGAGCATCACAGGC +
Preference number: 3 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGTGFGC*RRSITG
Trigger: GCCTGTGATGCTCCGTCTCAAACAGCCGAAACCTGT...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCAGAAGGGGAGTTGCCTaGATGAAAAGACCCATTTCC +
Preference number: 3 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPRRGVA*MKRPIS
Trigger: GGAAATGGGTCTTTTCATCAAGGCAACTCCCCTTCT...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp CACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTaGTCTGCTCTCGCTCTAAGCAGTGGGAAGACGTGT +
Preference number: 3 (lower is better)
Translates to: HHYLSGGACCAV*SALALSSGKTC
Trigger: ACACGTCTTCCCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp TTATATATAACTATACTGAGGTATGGTGTCCTTGGCTaGCGTCGAGCCCTGGCAACTGGGGGCTGGCCACGG +
Preference number: 3 (lower is better)
Translates to: LYITILRYGVLG*RRALATGGWPR
Trigger: CCGTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATACCTCAGTATAGTTATATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp TCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTTaGAGGTGTCTGGCAGAGCCTTCACAAATGGCTTGG +
Preference number: 3 (lower is better)
Translates to: SCSWCMVLSSQA*RCLAEPSQMAW
Trigger: CCAAGCCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGTCAAGGTAGTAAGTTaGGCCCCTGACGGGGCTGGC +
Preference number: 3 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSVKVVS*APDGAG
Trigger: GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGAC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCGAGAATGAGGGTTGCTaGATGGCAAGATTTCAGCTG +
Preference number: 3 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTENEGC*MARFQL
Trigger: CAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTC...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp GCCACAGTTGCTGGGGTAGGTTTACGTCTTTTCTCCTaGTCTTGGTGCATGGTGCTGAGCTCTCAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: ATVAGVGLRLFS*SWCMVLSSQAW
Trigger: CCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTACCCCAGCAACTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CTTGCAAGAGACAGGGACATGAAGTTGTGGCGTCTCTaGCACGCAAGTGTCCTGGGACAGAGCAATGGAAAC +
Preference number: 3 (lower is better)
Translates to: LARDRDMKLWRL*HASVLGQSNGN
Trigger: GTTTCCATTGCTCTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CCAGAGGAGAGTTTTCGAAGTGGGGGCTGGAAGCTCTaGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: PEESFRSGGWKL*ASLNRYACGWA
Trigger: GGCCCAACCACAAGCATACCTATTAAGAGAAGCCCAGAGCTTCCAGCCCCCACTTCGAAAACTCTCCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTATGGCCGCTCTCTTCTaGCCCATCCACATGAGGACC +
Preference number: 3 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSMAALF*PIHMRT
Trigger: GGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCAT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCAGGCACCAAAAGGACTaGGAGGCCTTCTCTTCAGGT +
Preference number: 3 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSRHQKD*EAFSSG
Trigger: ACCTGAAGAGAAGGCCTCCAAGTCCTTTTGGTGCCT...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp GACAATTCCAAAGAACACTCAACAAGGGCGGCCAGATaGACAGCGGTCCAAGTGACCCTCCCTGAACACCAA +
Preference number: 3 (lower is better)
Translates to: DNSKEHSTRAAR*TAVQVTLPEHQ
Trigger: TTGGTGTTCAGGGAGGGTCACTTGGACCGCTGTTCATCTGGCCGCCCTTGTTGAGTGTTCTTTGGAATTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp GTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTaGGCTCTCAAGCTTGGAGGTGTCTGGCAGAGCCTT +
Preference number: 3 (lower is better)
Translates to: VYVFSPALGAWC*ALKLGGVWQSL
Trigger: AAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp GCCCTGGCAACTGGGGGCTGGCCACGGAGTACAAGTTaGAAACCACACAGCAAAGTAAGGCACTTATTCTCA +
Preference number: 3 (lower is better)
Translates to: ALATGGWPRSTS*KPHSKVRHLFS
Trigger: TGAGAATAAGTGCCTTACTTTGCTGTGTGGTTTTCAACTTGTACTCCGTGGCCAGCCCCCAGTTGCCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp GCACTTATTCTCACACACAGGCGCACGCACGCAATCTaGTTGGGACAAAAAGTCTACAGGGGTTGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: ALILTHRRTHAI*LGQKVYRGCQA
Trigger: TGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCGCCTGTGTGTGAGAATAAGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTaGATTGAGTTGTCACGTCCCAAAGCCAAATGCCTT +
Preference number: 3 (lower is better)
Translates to: ESRDPTEFTPSF*IELSRPKAKCL
Trigger: AAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GTTGCTGGGGTAGGTTTACGTCTTTTCTCCTGCTCTTaGTGCATGGTGCTGAGCTCTCAAGCTTGGAGGTGT +
Preference number: 3 (lower is better)
Translates to: VAGVGLRLFSCS*CMVLSSQAWRC
Trigger: ACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTACCCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGTCCTTCTGGATTGAGTaGTCACGTCCCAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQSFWIE*SRPKAK
Trigger: TTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGA...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCCAAAGCCAAATGCCTaGGCATTTACAACGAGCAGT +
Preference number: 3 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSPKPNA*AFTTSS
Trigger: ACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGCACCATCCTTCTGGATaGAGTTGTCACGTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQHHPSG*SCHVPK
Trigger: CTTTGGGACGTGACAACTCAATCCAGAAGGATGGTG...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAAGAACTACTCCCCTTaGCCTCAAAACAGAGTTCGG +
Preference number: 3 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAKNYSP*PQNRVR
Trigger: CCGAACTCTGTTTTGAGGCAAAGGGGAGTAGTTCTT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTTATGATGTAAGTGACTaGGAGAAGGGGAGTTGCCTT +
Preference number: 3 (lower is better)
Translates to: RSREGSVNVARAEVSIGVYDVSD*EKGSCL
Trigger: AAGGCAACTCCCCTTCTCCAAGTCACTTACATCATA...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp CAACAAAAGGAAAGTGGCTATTTCTTGTGTAAGGGATaGCGACTCCCCCTCCCATGGGTCCCATTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: QQKESGYFLCKG*RLPLPWVPFLP
Trigger: GGGGAGAAATGGGACCCATGGGAGGGGGAGTCGTCATCCCTTACACAAGAAATAGCCACTTTCCTTTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp AACTGGCACAACGCAGGCACCTGGCACATCCCAGCATaGCATACATATCTGTTGAAGCCACAACTCAACAGT +
Preference number: 3 (lower is better)
Translates to: NWHNAGTWHIPA*HTYLLKPQLNS
Trigger: ACTGTTGAGTTGTGGCTTCAACAGATATGTATGGCATGCTGGGATGTGCCAGGTGCCTGCGTTGTGCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp AATGAGGGTTGCTTGATGGCAAGATTTCAGCTGCTCTaGTCACACTACCTCTCCAGCAACTGGCACAACGCA +
Preference number: 3 (lower is better)
Translates to: NEGCLMARFQLL*SHYLSSNWHNA
Trigger: TGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CCCAAAGCCAAATGCCTTGGCATTTACAACGAGCAGTaGCTGCTGTGCCTCAAGATGGTACATGCAGAACTG +
Preference number: 3 (lower is better)
Translates to: PKAKCLGIYNEQ*LLCLKMVHAEL
Trigger: CAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTAAATGGCTTGGCACTTaGGGGCAGGAGAGAATGCAT +
Preference number: 3 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSKWLGT*GQERMH
Trigger: ATGCATTCTCTCCTGCCCCAAAGTGCCAAGCCATTT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCTTGGGAAGTTATGCCTaGGGACATGAACAGACAAGT +
Preference number: 3 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSLGSYA*GHEQTS
Trigger: ACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAA...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp AGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTaGCTCTCAGTCAGTCATGGTTTCATGCAGTCTAAA +
Preference number: 3 (lower is better)
Translates to: RGQKGAYHLPRE*LSVSHGFMQSK
Trigger: TTTAGACTGCATGAAACCATGACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp TGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTaGTGTGCAGCCCAGAGAAGTGTCAGGGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: CVETKLPFYQRF*CAAQRSVREGE
Trigger: CTCTCCTTCCCTGACACTTCTCTGGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp CACGCAATCTGCTTGGGACAAAAAGTCTACAGGGGTTaGCAAGCACGAAAGGCTACATGGAGACTGCAAATC +
Preference number: 3 (lower is better)
Translates to: HAICLGQKVYRG*QARKATWRLQI
Trigger: GATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp AGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTaGGGTTTCTTAAATGTTGGGAAGTTATGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: RICERGQGRGVY*GFLNVGKLCLG
Trigger: CCCAAGGCATAACTTCCCAACATTTAAGAAACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp ATCCGTGTCCCTTTTATATATAACTATACTGAGGTATaGTGTCCTTGGCTGCCGTCGAGCCCTGGCAACTGG +
Preference number: 3 (lower is better)
Translates to: IRVPFIYNYTEV*CPWLPSSPGNW
Trigger: CCAGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATACCTCAGTATAGTTATATATAAAAGGGACACGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCGAACTGCTGTTTGGTTaGGTTTTGAATGCTTGTGAA +
Preference number: 3 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGELLFG*VLNACE
Trigger: TTCACAAGCATTCAAAACCAAACCAAACAGCAGTTC...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATTCTTTTCTCCTGCTCTaGGTGCATGGTGCTGAGCTC +
Preference number: 3 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHSFLLL*VHGAEL
Trigger: GAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGA...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp CTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATaGAGGCCTCCAATGGCGTTAGGAAACAAATCCCTC +
Preference number: 3 (lower is better)
Translates to: LFPFLQPYRREG*RPPMALGNKSL
Trigger: GAGGGATTTGTTTCCTAACGCCATTGGAGGCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp CAATGGAAACCTACAGGCATGAGAATGAGGGTTGCTTaGTGGCAAGATTTCAGCTGCTCTGCTCACACTACC +
Preference number: 3 (lower is better)
Translates to: QWKPTGMRMRVA*WQDFSCSAHTT
Trigger: GGTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCTGTAGGTTTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp CGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTaGACAAGTAGCTCTAGAGTGCTTTTAGGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: RLLLRKISFLST*TSSSRVLLGRV
Trigger: CACTCTGCCTAAAAGCACTCTAGAGCTACTTGTTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp AAGCCAAATGCCTTGGCATTTACAACGAGCAGTGGCTaGTGTGCCTCAAGATGGTACATGCAGAACTGGAAT +
Preference number: 3 (lower is better)
Translates to: KPNALAFTTSSG*CASRWYMQNWN
Trigger: ATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CAGACCCTAATCCTGGGCAGCGGGGTTAGAAACAAATaGGGTGAAACTGTCACAATCCGTGTCCCTTTTATA +
Preference number: 3 (lower is better)
Translates to: QTLILGSGVRNK*GETVTIRVPFI
Trigger: TATAAAAGGGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGATTAGGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp TCTAGAGTGCTTTTAGGCAGAGTGACGGTGATGTCATaGGCACCACGCCAATCTTATTCCTGGACAATGACT +
Preference number: 3 (lower is better)
Translates to: SRVLLGRVTVMS*APRQSYSWTMT
Trigger: AGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTCACTCTGCCTAAAAGCACTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCATGCCTGCTGCGCAGTTaGCTCTGCTCTCGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: QARVENRHFVHICIISCSCLLRS*LCSRSK
Trigger: CTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCA...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTTTGAAGTTTGTGCACTaGTGCCATAGGCCCTTAAGC +
Preference number: 3 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTLKFVH*CHRPLS
Trigger: GCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAA...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp AAGTGGCTAAGGGATCCCATATCAGGTCTGCTGTGTTaGAACCAAACTGCCCTTTTACCAACGTTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: KWLRDPISGLLC*NQTALLPTFLL
Trigger: CAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp GGCCTGAACTCAATTATAGACTCTGTCAGGGCTGTTTaGCTAAAGTGGCTAAGGGATCCCATATCAGGTCTG +
Preference number: 3 (lower is better)
Translates to: GLNSIIDSVRAV*LKWLRDPISGL
Trigger: CAGACCTGATATGGGATCCCTTAGCCACTTTAGTCAAACAGCCCTGACAGAGTCTATAATTGAGTTCAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GAACTGCTGTTTGGTTTGGTTTTGAATGCTTGTGAATaGCTGAAAAAGCAATGGCGACTGGGACTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: ELLFGLVLNACE*LKKQWRLGLLE
Trigger: CTCCAGCAGTCCCAGTCGCCATTGCTTTTTCAGCCATTCACAAGCATTCAAAACCAAACCAAACAGCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp AAAGTCTACAGGGGTTGCCAAGCACGAAAGGCTACATaGAGACTGCAAATCCCAATGCTCGTCTTTATAGCT +
Preference number: 3 (lower is better)
Translates to: KVYRGCQARKAT*RLQIPMLVFIA
Trigger: AGCTATAAAGACGAGCATTGGGATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCCTGTTTGGTTTGGTTTaGAATGCTTGTGAATGGCTG +
Preference number: 3 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTLFGLV*NACEWL
Trigger: CAGCCATTCACAAGCATTCAAAACCAAACCAAACAG...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATATCAGGTCTGCTGTGTaGAAACCAAACTGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHIRSAV*KPNCPF
Trigger: AAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp AGTGGCTGCTGTGCCTCAAGATGGTACATGCAGAACTaGAATCATATATCTCGTCAGTTAATCAGCACCAAG +
Preference number: 3 (lower is better)
Translates to: SGCCASRWYMQN*NHISRQLISTK
Trigger: CTTGGTGCTGATTAACTGACGAGATATATGATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCAGCCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp CCAGGGCAGAGGTGTCTATTGGGGTTTCTTAAATGTTaGGAAGTTATGCCTTGGGACATGAACAGACAAGTT +
Preference number: 3 (lower is better)
Translates to: PGQRCLLGFLKC*EVMPWDMNRQV
Trigger: AACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAACATTTAAGAAACCCCAATAGACACCTCTGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR-3UTR CAA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCAAAAAGTCTACAGGGGTaGCCAAGCACGAAAGGCTAC +
Preference number: 3 (lower is better)
Translates to: QARVENRHFVHICIISCSKSLQG*PSTKGY
Trigger: GTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTT...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR TCA 72 bp GGTTTCTTAAATGTTGGGAAGTTATGCCTTGGGACATaGACAGACAAGTTTCTCAGCAACCATTTCGGTCTG +
Preference number: 3 (lower is better)
Translates to: GFLNVGKLCLGT*TDKFLSNHFGL
Trigger: CAGACCGAAATGGTTGCTGAGAAACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAACATTTAAGAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CCA 72 bp GCATCCATGGAAGATAAGAATTTTGTTGTGGAATCCTaGGAGGAGATGCACTCTTTCACCCAACCTCTTATT +
Preference number: 3 (lower is better)
Translates to: ASMEDKNFVVES*EEMHSFTQPLI
Trigger: AATAAGAGGTTGGGTGAAAGAGTGCATCTCCTCCCAGGATTCCACAACAAAATTCTTATCTTCCATGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR GCA 72 bp AGCTTAGAACATCAAGAATTGAAGTTTGTGCACTTGTaGCATAGGCCCTTAAGCAAAAGAATTAGTTATGTG +
Preference number: 3 (lower is better)
Translates to: SLEHQELKFVHL*HRPLSKRISYV
Trigger: CACATAACTAATTCTTTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCCTGACCGGCAGGCCCTaGGGGACCGAAGGACAGGAC +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPLTGRP*GTEGQD
Trigger: GTCCTGTCCTTCGGTCCCCCAGGGCCTGCCGGTCAG...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCGCTGCCGTCGAGCCCTaGCAACTGGGGGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGAAVEP*QLGAGH
Trigger: GTGGCCAGCCCCCAGTTGCCAGGGCTCGACGGCAGC...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCGCTCGGAAGGCAGAGTaGGGGAGGAAGAGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPARKAE*GRKSTP
Trigger: TGGAGTGCTCTTCCTCCCTCACTCTGCCTTCCGAGC...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTCACATGAGCCAGGCCTaGGCGGCACACACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSHMSQA*AAHTSS
Trigger: GCTGCTGGTGTGTGCCGCCCAGGCCTGGCTCATGTG...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGCACCAAGGAGATTATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCAGGCAGGGAGGGGGCCTaGGCTCCTTGCCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISTKEIMIRDGRSLLAHPGREGA*APCPLL
Trigger: GAGCAGGGGGCAAGGAGCCCAGGCCCCCTCCCTGCC...TGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGCCCCGGCCACTGGGCTaGTGGGACCACATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELPRPLG*WDHIQG
Trigger: GCCTTGGATGTGGTCCCACCAGCCCAGTGGCCGGGG...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGGGCTGGCTCTGGAGGTaGGGACCAGCCTATCTCAGG +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGGWLWR*GPAYLR
Trigger: CCTGAGATAGGCTGGTCCTCACCTCCAGAGCCAGCC...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCTCGAGCCCTGGCAACTaGGGGCTGGCCACGGAGTAC +
Preference number: 4 (lower is better)
Translates to: EGARKAPIIYPESDSQSVSSPGN*GLATEY
Trigger: GTACTCCGTGGCCAGCCCCCAGTTGCCAGGGCTCGA...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp CAGCACGGGGAGCTTGCAAGAGACAGGGACATGAAGTaGTGGCGTCTCTGGCACGCAAGTGTCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: QHGELARDRDMK*WRLWHASVLGQ
Trigger: CTGTCCCAGGACACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTGCAAGCTCCCCGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGGAGCAAGCAGAAAGGTaGCAGCCATGGGCGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELEQAER*QPWAPG
Trigger: GCCAGGCGCCCATGGCTGGCACCTTTCTGCTTGCTC...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCGCCAGTGCCGCAGCTaGGAGTGGATGAAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSRQCRS*EWMKRH
Trigger: GTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCCTGGTAGTCTGGGTGTaGCTGGGACTCTCCGCTTTG +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTLVVWV*LGLSAL
Trigger: CAAAGCGGAGAGTCCCAGCCACACCCAGACTACCAG...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGCCTGGCTGGTAGTCTaGGTGTGGCTGGGACTCTCC +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVAWLVV*VWLGLS
Trigger: GGAGAGTCCCAGCCACACCCAGACTACCAGCCAGGC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAACGGCCACTGGGCTGGTaGGACCACATCCAAGGCATG +
Preference number: 4 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRERPLGW*DHIQGM
Trigger: CATGCCTTGGATGTGGTCCCACCAGCCCAGTGGCCG...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCCAGGTTTCGGCTGTTTaGGACGGAGCATCACAGGCA +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTQVSAV*DGASQA
Trigger: TGCCTGTGATGCTCCGTCTCAAACAGCCGAAACCTG...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTGAACAGCGGTCCAAGTaGCCCTCCCTGAACACCAAG +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSEQRSK*PSLNTK
Trigger: CTTGGTGTTCAGGGAGGGTCACTTGGACCGCTGTTC...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCCTTGGTGCATGGTGCTaGGCTCTCAAGCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTLGAWC*ALKLGG
Trigger: ACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAG...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGCAGTATTCCCGCCAGTaGCGCAGCTGGGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELQYSRQ*RSWEWM
Trigger: CATCCACTCCCAGCTGCGGCACTGGCGGGAATACTG...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGTATGGTGTCCTTGGCTaGCGTCGAGCCCTGGCAACT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGYGVLG*RRALAT
Trigger: AGTTGCCAGGGCTCGACGGCAGCCAAGGACACCATA...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCTGGCTGAAAAAGCAATaGCGACTGGGACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPWLKKQ*RLGLLE
Trigger: CTCCAGCAGTCCCAGTCGCCATTGCTTTTTCAGCCA...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCCGCTGACCCCGGCCACTaGGCTGGTGGGACCACATCC +
Preference number: 4 (lower is better)
Translates to: SAVLKPNCPFTNVSAVQPADPGH*AGGTTS
Trigger: GGATGTGGTCCCACCAGCCCAGTGGCCGGGGTCAGC...GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCGGGCCAGAAGAGAACTaGCACAAGGGAGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPGPEEN*HKGETK
Trigger: TTTGGTTTCTCCCTTGTGTCAGTTCTCTTCTGGCCC...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCCCAACGTTTCTGCTGTaGAGCCCAGAGAAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTPTFLL*SPEKCQ
Trigger: CTGACACTTCTCTGGGCTGCACAGCAGAAACGTTGG...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCTGCCGCAGCTGGGAGTaGATGAAGCGCCACATGAGC +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSCRSWE*MKRHMS
Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCA...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGAGAGCGACAGCAGGCTaGCTTCCAATCCGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQRATAG*LPIRGQ
Trigger: CTGGCCGCGGATTGGAAGCCAGCCTGCTGTCGCTCT...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAGCACACCCGTCCACTaGGAAGCAGAGCCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVSTPVH*EAEPKL
Trigger: CAGCTTAGGCTCTGCTTCCCAGTGGACGGGTGTGCT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGGAGGTATGGTGTCCTTaGCTGCCGTCGAGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQEVWCP*LPSSPG
Trigger: GCCAGGGCTCGACGGCAGCCAAGGACACCATACCTC...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCGGAGAGTTTTCGAAGTaGGGGCTGGAAGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EGARKAPIIYPESDSQSVGEFSK*GLEALG
Trigger: GCCCAGAGCTTCCAGCCCCCACTTCGAAAACTCTCC...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCGTGAAGCCCTGCCAATaGCACAGCCTGGAGAGCACC +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGVKPCQ*HSLEST
Trigger: GGTGCTCTCCAGGCTGTGTCATTGGCAGGGCTTCAC...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCTTCTTGTGTAAGGGATaGCGACTCCCCCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGFLCKG*RLPLPW
Trigger: CCATGGGAGGGGGAGTCGTCATCCCTTACACAAGAA...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGGGCTCCTTGCCCCCTaGTCGGCCCCCACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGGLLAP*SAPTKR
Trigger: CCTCTTGGTGGGGGCCGAGCAGGGGGCAAGGAGCCC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCACCGAAGGACAGGACTaGAATCTTAGCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EGARKAPIIYPESDSQSVTEGQD*NLSSPP
Trigger: GGGAGGGGAGCTAAGATTGCAGTCCTGTCCTTCGGT...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTGCCTGCTGCGCAGTTTaGTCTGCTCTCGCTCTAAGC +
Preference number: 4 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAACCAV*SALALS
Trigger: GCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGC...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTCTTTCTGGAGGTGCCTaGTGCGCAGTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVLSGGA*CAVCSA
Trigger: AGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAG...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGGGCTGGGAGAGTTATTaGACAACCCGGAAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGGWESY*TTRKSE
Trigger: CTCACTCTTCCGGGTTGTGCAATAACTCTCCCAGCC...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCTCCTGCGGAAAGCCATaGCAGCGGGCGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGSCGKP*QRARSG
Trigger: GCCGCTGCGCGCCCGCTGCCATGGCTTTCCGCAGGA...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCTACAGGCAAATATACTaGAGCTGGCGGGGAATTTCC +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPYRQIY*SWRGIS
Trigger: GGAAATTCCCCGCCAGCTCCAGTATATTTGCCTGTA...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGGGCTTAGGAGGCTGCTaGCTGAACATGCGATTTGCA +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGGLGGC*LNMRFA
Trigger: TGCAAATCGCATGTTCAGCCAGCAGCCTCCTAAGCC...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTCAGAGCCTTCACAAATaGCTTGGCACTTTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSQSLHK*LGTLGQ
Trigger: CTGCCCCAAAGTGCCAAGCCATTTGTGAAGGCTCTG...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCCACAGCCACCCAGCTaGGCCAGAAGAGAACTGACA +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSPQPPS*ARRELT
Trigger: TGTCAGTTCTCTTCTGGCCCAGCTGGGTGGCTGTGG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp CTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTaGGAGGTGTCTGGCAGAGCCTTCACAAATGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLLLVHGAELSS*EVSGRAFTNGL
Trigger: CAAGCCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGTCTTGCCCATCCACATaGGGACCACCAAGGGCCTAC +
Preference number: 4 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQSCPST*GPPRAY
Trigger: GTAGGCCCTTGGTGGTCCTCATGTGGATGGGCAAGA...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGCATCTACCCAGAGAGTaGCTCTCAGTCAGTCATGGT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGHLPRE*LSVSHG
Trigger: ACCATGACTGACTGAGAGTCACTCTCTGGGTAGATG...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCTTATGCCTTGGGACATaGACAGACAAGTTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPLCLGT*TDKFLS
Trigger: GCTGAGAAACTTGTCTGTTCATGTCCCAAGGCATAA...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAACTTTTCGTCCTCCTaGGGAAAGCCATGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGANFSSS*GKPWQR
Trigger: CCGCTGCCATGGCTTTCCGCAGGAGGACGAAAAGTT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCCTCCGCTTTGCACTCTaGTCATTCCAGTATTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGARKAPIIYPESDSQSVLRFAL*SFQYSR
Trigger: GCGGGAATACTGGAATGAGCAGAGTGCAAAGCGGAG...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGACAACGAGCAGTGGCTaGTGTGCCTCAAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELTTSSG*CASRWY
Trigger: GTACCATCTTGAGGCACAGCAGCCACTGCTCGTTGT...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGTTACCTTTCTGGAGGTaGCTGCTGCGCAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELLPFWR*LLRSLL
Trigger: GAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTCCCAGGCTGGCAAGATaGCAGCCCCACTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSPRLAR*QPHSWS
Trigger: AGACCATGAGTGGGGCTGGCATCTTGCCAGCCTGGG...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCCATTTCTCCCCCAGTTaGAGGTGTTTTAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTHFSPS*RCFKGQ
Trigger: CTGTCCCTTAAAACACCTGCAACTGGGGGAGAAATG...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGTCGGGATCAAATGCCTaGTTTTCCATGCGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGSGSNA*FSMRAS
Trigger: ACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGA...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCCCAGCCATGGGCGCCTaGCGTTCCAGAAAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTPAMGA*RSRKAS
Trigger: GCTGGCTTTTCTGGAACGCCAGGCGCCCATGGCTGG...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAGGTCGACTCCACTGTaGGTTCTGCCACCATTACCT +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVRSTPL*VLPPLP
Trigger: AGGTAATGGTGGCAGAACCCACAGTGGAGTCGACCT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCAAAAGCAATGGCGACTaGGACTGCTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGKSNGD*DCWRKA
Trigger: GGCCTTTCTCCAGCAGTCCCAGTCGCCATTGCTTTT...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCAGGCTGGAGTGCCATaGTACAATCTCCGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSQAGVP*YNLRSL
Trigger: CAGTGAGCGGAGATTGTACCATGGCACTCCAGCCTG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTCTTTTCTCCTGCTCTTaGTGCATGGTGCTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSLFSCS*CMVLSS
Trigger: AGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAG...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGGTAGCACAGATCCTTaGTCCACCAGCGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSGSTDP*STSATS
Trigger: GGAGGTGGCGCTGGTGGACCAAGGATCTGTGCTACC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAGGTATGCTTGTGGTTaGGCCACCTCACAGACTTCC +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVRYACG*ATSQTS
Trigger: GGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTACAAGGGCGGCCAGATaGACAGCGGTCCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTTRAAR*TAVQVT
Trigger: GGTCACTTGGACCGCTGTTCATCTGGCCGCCCTTGT...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCACTCCTAACCTCAGGTaGTCTGCCCACCTCGACCTC +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSTPNLR*SAHLDL
Trigger: GAGGTCGAGGTGGGCAGATCACCTGAGGTTAGGAGT...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTCTAGACCCTATCAGGTaGACAGGGCTCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSLDPIR*TGLSTC
Trigger: GCAGGTGGAGAGCCCTGTTCACCTGATAGGGTCTAG...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAATGCCTGGTTTTCCATaGGAGCCAGTCCAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREMPGFP*EPVQSQ
Trigger: TTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCAT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTTTTCTCGGGATCAAATaGCTGGTTTTCCATGCGAGC +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSFLGIK*LVFHAS
Trigger: GCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAA...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGCTCCACTGTGGGTTCTaGCACCATTACCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQLHCGF*HHYLSG
Trigger: TCCAGAAAGGTAATGGTGGCAGAACCCACAGTGGAG...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCACCTCCCTCTCCTCCTaGTGTGTCTGTTGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSTSLSS*CVCWLP
Trigger: GGGAAGCCAACAGACACAGCAGGAGGAGAGGGAGGT...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAATCCTGGGAGGAGATaGACTCTTTCACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVNPGRR*TLSPNL
Trigger: GAGGTTGGGTGAAAGAGTGCATCTCCTCCCAGGATT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGCACCAAGGAGATTATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACTGAGCTCTCAAGCTTaGAGGTGTCTGGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ISTKEIMIRDGRSLLAHPLSSQA*RCLAEP
Trigger: AGGCTCTGCCAGACACCTCCAAGCTTGAGAGCTCAG...TGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp AGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTaGCAAGGTGGAGCTAACACTCATGTGAGTAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQLSLGRTGLQP*QGGANTHVSSG
Trigger: CCCACTACTCACATGAGTGTTAGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGGACTTGGCTCTGCTGTaGAATAAACGTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQDLALL*NKRARE
Trigger: CTCCCTGGCACGTTTATTTCACAGCAGAGCCAAGTC...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CCACCATTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAGCACTCCATTGTCTTaGCTCAAAAGCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPFWRCLLRSLLCSRSSTPLS*LKSFQH
Trigger: GTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCT...AGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTTCACTGGGACAACCTTaGGCTGGAGAGAGATCCTAT +
Preference number: 4 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGASLGQP*AGERSY
Trigger: ATAGGATCTCTCTCCAGCTCAAGGTTGTCCCAGTGA...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCGAGCAGTGGCTGCTGTaGCTCAAGATGGTACATGCA +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGEQWLL*LKMVHA
Trigger: TGCATGTACCATCTTGAGGCACAGCAGCCACTGCTC...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCGCACGCACGCAATCTaGTTGGGACAAAAAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSRTHAI*LGQKVY
Trigger: GTAGACTTTTTGTCCCAAGCAGATTGCGTGCGTGCG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTACAGGGCTCTCCACCTaGGGCTGTTGCTTCGCAAAA +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSTGLST*GCCFAK
Trigger: TTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCCTGT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAAGAGTCTAGCCGTGTaGAAGAGGAACTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVKSLAV*KRNSVE
Trigger: CTCAACTGAGTTCCTCTTCCACACGGCTAGACTCTT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATGAAAGGTGCCAGCCATaGGCGCCTGGCGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHERCQP*APGVPE
Trigger: TTCTGGAACGCCAGGCGCCCATGGCTGGCACCTTTC...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGTGCTGTGCCTCAAGATaGTACATGCAGAACTGGAAT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGCCASR*YMQNWN
Trigger: ATTCCAGTTCTGCATGTACCATCTTGAGGCACAGCA...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAATTTACAACGAGCAGTaGCTGCTGTGCCTCAAGATG +
Preference number: 4 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREIYNEQ*LLCLKM
Trigger: CATCTTGAGGCACAGCAGCCACTGCTCGTTGTAAAT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCGGCACCAAAAGGACTTaGAGGCCTTCTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGGTKRT*RPSLQV
Trigger: CACCTGAAGAGAAGGCCTCCAAGTCCTTTTGGTGCC...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAATCTTGTTGTCCAGGCTaGAGTGCCATGGTACAATCT +
Preference number: 4 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRESCCPG*SAMVQS
Trigger: AGATTGTACCATGGCACTCCAGCCTGGACAACAAGA...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCAGGGACATGAAGTTGTaGCGTCTCTGGCACGCAAGT +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGRDMKL*RLWHAS
Trigger: ACTTGCGTGCCAGAGACGCCACAACTTCATGTCCCT...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTCAAGGCATGAAGTACTaGCAGCACGGGGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAQGMKY*QHGELA
Trigger: TGCAAGCTCCCCGTGCTGCCAGTACTTCATGCCTTG...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTGCAACCATTTCGGTCTaGTGGCCCAGACACACATGG +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSATISV*WPRHTW
Trigger: CCATGTGTGTCTGGGCCACCAGACCGAAATGGTTGC...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCTGGGAAGTTATGCCTTaGGACATGAACAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTWEVMP*DMNRQV
Trigger: AACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCA...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGGGGACAACCTTGAGCTaGAGAGAGATCCTATTTAGG +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQGTTLS*REILFR
Trigger: CCTAAATAGGATCTCTCTCCAGCTCAAGGTTGTCCC...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCGCACCAAGGAGATTATaGTCCGAGATGGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTAPRRL*SEMAAL
Trigger: GAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGC...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATCAGCACCAAGGAGATTATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCATATCGTAGAGAGGGATaGAGGCCTCCAATGGCGTTA +
Preference number: 4 (lower is better)
Translates to: ISTKEIMIRDGRSLLAHPYRREG*RPPMAL
Trigger: TAACGCCATTGGAGGCCTTCATCCCTCTCTACGATA...TGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGGAGGCCTCCTGCATGTaGAGCCCTGCCAATGACACA +
Preference number: 4 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVEASCM*SPANDT
Trigger: TGTGTCATTGGCAGGGCTTCACATGCAGGAGGCCTC...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCTGCGCAGTTTGCTCTaGTCTCGCTCTAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTLRSLL*SRSKQW
Trigger: CCACTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTAGCTCTTCCCATTTCTaGAACCTTATCGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVSSSHF*NLIVER
Trigger: CCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCT...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCTCGAGAGGCCACAGTTaGTGGGGTAGGTTTACGTCT +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSSRGHS*WGRFTS
Trigger: AGACGTAAACCTACCCCAGCAACTGTGGCCTCTCGA...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAAAGTCTACAGGGGTTaGCAAGCACGAAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGAKVYRG*QARKAT
Trigger: TGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGAGCTCGAACAGTTCTaGAACAGTCAGACATGTATG +
Preference number: 4 (lower is better)
Translates to: RSREGSVNVARAEVSIGVELEQF*NSQTCM
Trigger: CATACATGTCTGACTGTTGCAGAACTGTTCGAGCTC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTGAGTTTCTTAGTCCGTaGGGAGGTTCCGTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAEFLSP*GGSVLC
Trigger: GCAGAGAACGGAACCTCCCCACGGACTAAGAAACTC...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTACCATTTCGGTCTGGTaGCCCAGACACACATGGGAT +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQATISVW*PRHTWD
Trigger: ATCCCATGTGTGTCTGGGCCACCAGACCGAAATGGT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGCACCAAGGAGATTATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCAGTGACGGTGATGTCATaGGCACCACGCCAATCTTAT +
Preference number: 4 (lower is better)
Translates to: ISTKEIMIRDGRSLLAHPVTVMS*APRQSY
Trigger: ATAAGATTGGCGTGGTGCCCATGACATCACCGTCAC...TGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp TCTGGATTGAGTTGTCACGTCCCAAAGCCAAATGCCTaGGCATTTACAACGAGCAGTGGCTGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGLSCHVPKPNA*AFTTSSGCCAS
Trigger: TGAGGCACAGCAGCCACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGGGACGTGACAACTCAATCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCCAAGTGACCCTCCCTaGACACCAAGGGACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGPSDPP*TPRDQH
Trigger: ATGCTGGTCCCTTGGTGTTCAGGGAGGGTCACTTGG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGTACAGTCTCATCACATaGACACTCAAATCTGTACCC +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQYSLIT*TLKSVP
Trigger: GGGTACAGATTTGAGTGTTCATGTGATGAGACTGTA...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCAGAGGAACCGAAAAATaGGGTTTACAGTCTCATCAC +
Preference number: 4 (lower is better)
Translates to: EGARKAPIIYPESDSQSVRGTEK*GLQSHH
Trigger: GTGATGAGACTGTAAACCTCATTTTTCGGTTCCTCT...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCTCGACCTCCCAAAGTaGTGGGATAACAGGCGTAAG +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTLDLPK*WDNRRK
Trigger: CTTACGCCTGTTATCCCAGCACTTTGGGAGGTCGAG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCTTTTACCAACGTTTCTaGTGTGCAGCCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSFYQRF*CAAQRS
Trigger: ACTTCTCTGGGCTGCACAGCAGAAACGTTGGTAAAA...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGATCCCATATCAGGTCTaGTGTGTTGAAACCAAACTG +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQIPYQV*CVETKL
Trigger: CAGTTTGGTTTCAACACAGCAGACCTGATATGGGAT...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCATGTCCGCATGGTTGTaGATGACGAACTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTMSAWL*MTNSWL
Trigger: CAGCCAGGAGTTCGTCATCCACAACCATGCGGACAT...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCCACCATTACCTTTCTaGAGGTGCCTGCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVPPLPF*RCLLRS
Trigger: ACTGCGCAGCAGGCACCTCCAGAAAGGTAATGGTGG...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTAAGCTTGGAGGTGTCTaGCAGAGCCTTCACAAATGG +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSKLGGV*QSLHKW
Trigger: CCATTTGTGAAGGCTCTGCCAGACACCTCCAAGCTT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGGGGTTTCTTAAATGTTaGGAAGTTATGCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: ELESRDPTEFTPSFWIELGFLKC*EVMPWD
Trigger: GTCCCAAGGCATAACTTCCCAACATTTAAGAAACCC...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGGGGGTTAGAAACAAATaGGGTGAAACTGTCACAATC +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQGVRNK*GETVTI
Trigger: GATTGTGACAGTTTCACCCCATTTGTTTCTAACCCC...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GGCACCTGGCACATCCCAGCATGCCATACATATCTGTaGAAGCCACAACTCAACAGTTTAACCTGGACTCAC +
Preference number: 4 (lower is better)
Translates to: GTWHIPACHTYL*KPQLNSLTWTH
Trigger: GTGAGTCCAGGTTAAACTGTTGAGTTGTGGCTTCAACAGATATGTATGGCATGCTGGGATGTGCCAGGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GCACGCAATCTGCTTGGGACAAAAAGTCTACAGGGGTaGCCAAGCACGAAAGGCTACATGGAGACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: ARNLLGTKSLQG*PSTKGYMETAN
Trigger: ATTTGCAGTCTCCATGTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTACCAAATCACCGAGGTaGAATGAAAGACGACCAGCT +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSTKSPR*NERRPA
Trigger: AGCTGGTCGTCTTTCATTTCACCTCGGTGATTTGGT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGGACCAGTATTCCAAATaGCACTACTATTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQDQYSK*HYYSCT
Trigger: GGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTC...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCGTGATGTCAGAAAGATaGCCAGTATTCCAAATGACA +
Preference number: 4 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGVMSER*PVFQMT
Trigger: TGTCATTTGGAATACTGGTCATCTTTCTGACATCAC...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCCACAACCCGGAAGAGTaGGAAAAACGTGGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSHNPEE*EKRGRA
Trigger: TGCCCGCCCACGTTTTTCTCACTCTTCCGGGTTGTG...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTCTTATTCCTGGACAATaGCTTAAGCCCCATCGTGAG +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQALIPGQ*LKPHRE
Trigger: CTCACGATGGGGCTTAAGTCATTGTCCAGGAATAAG...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGTCAGTCATGGTTTCATaGAGTCTAAAATGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGSVMVS*SLKCCS
Trigger: ACTACAGCATTTTAGACTGCATGAAACCATGACTGA...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATCAGTCTGTGTCAACCTaGCACAGACTTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHQSVST*HRLGSA
Trigger: AGCAGAGCCAAGTCTGTGGCAGGTTGACACAGACTG...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCAAGTTTGTGCACTTGTaGCATAGGCCCTTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSKFVHL*HRPLSK
Trigger: TTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTT...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCCATGTTCTAAAAGAGTaGCACAGAAACCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSHVLKE*HRNPPR
Trigger: CCTGGGTGGGTTTCTGTGGCACTCTTTTAGAACATG...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCACTTTGTCCACATTTaGATTATCAGTTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSHFVHI*IISCSG
Trigger: CCCTGAGCAACTGATAATGCAAATGTGGACAAAGTG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTCAAATATACTGGAGCTaGCGGGGAATTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAQIYWS*RGISSF
Trigger: GAAGGAGGAAATTCCCCGCCAGCTCCAGTATATTTG...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCCTCAACAGTTTAACCTaGACTCACCTGAGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTLNSLT*THLREA
Trigger: GGCCTCTCTCAGGTGAGTCCAGGTTAAACTGTTGAG...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCTGGGACAGAGCAATaGAAACCTACAGGCATGAGA +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTPGTEQ*KPTGMR
Trigger: TCTCATGCCTGTAGGTTTCCATTGCTCTGTCCCAGG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGGCACGCAAGTGTCCTaGGACAGAGCAATGGAAACC +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGGTQVS*DRAMET
Trigger: GGTTTCCATTGCTCTGTCCCAGGACACTTGCGTGCC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGATAAGAATTTTGTTGTaGAATCCTGGGAGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQIRILL*NPGRRC
Trigger: GCATCTCCTCCCAGGATTCCACAACAAAATTCTTAT...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCGCACGAAAGGCTACATaGAGACTGCAAATCCCAATG +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSARKAT*RLQIPM
Trigger: CATTGGGATTTGCAGTCTCCATGTAGCCTTTCGTGC...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTAACTATACTGAGGTATaGTGTCCTTGGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTNYTEV*CPWLPS
Trigger: CGACGGCAGCCAAGGACACCATACCTCAGTATAGTT...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTAAGGAGTTTGCTATGTaGGGCCAGAGGAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQAKEFAM*GQRRVF
Trigger: GAAAACTCTCCTCTGGCCCCACATAGCAAACTCCTT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGTTATGTGTTAGCACTTaGAGACTGGGAAGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGLCVST*RLGSKS
Trigger: ACTTTTACTTCCCAGTCTCCAAGTGCTAACACATAA...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GCAATGGAAACCTACAGGCATGAGAATGAGGGTTGCTaGATGGCAAGATTTCAGCTGCTCTGCTCACACTAC +
Preference number: 4 (lower is better)
Translates to: AMETYRHENEGC*MARFQLLCSHY
Trigger: GTAGTGTGAGCAGAGCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTCATGCCTGTAGGTTTCCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATATCACCGAGGTGAAATaGAAGACGACCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHITEVK*KTTSCP
Trigger: TGGACAGCTGGTCGTCTTTCATTTCACCTCGGTGAT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCGTTTGGTTTCTACTGTaGTGTCAGAAAGATGACCAG +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGVWFLL*CQKDDQ
Trigger: CTGGTCATCTTTCTGACATCACAGTAGAAACCAAAC...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCCCCACGGAGTACAAGTTaGAAACCACACAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SAVLKPNCPFTNVSAVQPPRSTS*KPHSKV
Trigger: TACTTTGCTGTGTGGTTTTCAACTTGTACTCCGTGG...GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGTGGGCTTAGGAGGCTaGTGGCTGAACATGCGATTT +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGVGLGG*WLNMRF
Trigger: AAATCGCATGTTCAGCCAGCAGCCTCCTAAGCCCAC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCACAGACTTGGCTCTaGTGTGAAATAAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTPQTWL*CEINVP
Trigger: TGGCACGTTTATTTCACAGCAGAGCCAAGTCTGTGG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGTCCACCTGCGGCTGTTaGTTCGCAAAATATCCTTCC +
Preference number: 4 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVSTCGC*FAKYPS
Trigger: GGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGA...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCAAGCCGATGTCCGCATaGTTGTGGATGACGAACTCC +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGKPMSA*LWMTNS
Trigger: GGAGTTCGTCATCCACAACCATGCGGACATCGGCTT...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGGATTATGATCCGAGATaGCCGCTCTCTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVDYDPR*PLSSCP
Trigger: TGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATC...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACACAACGCAGGCACCTaGCACATCCCAGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: QARVENRHFVHICIISCSHNAGT*HIPACH
Trigger: ATGGCATGCTGGGATGTGCCAGGTGCCTGCGTTGTG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCAAGTTGTGGCGTCTCTaGCACGCAAGTGTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSKLWRL*HASVLG
Trigger: TCCCAGGACACTTGCGTGCCAGAGACGCCACAACTT...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTAACCTGCCACAGACTTaGCTCTGCTGTGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQANLPQT*LCCEIN
Trigger: GTTTATTTCACAGCAGAGCCAAGTCTGTGGCAGGTT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCCTTCACAAATGGCTTaGCACTTTGGGGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGPSQMA*HFGAGE
Trigger: CTCTCCTGCCCCAAAGTGCCAAGCCATTTGTGAAGG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATTGTGGAAAGGACCACTaGCTGGGAGAGTTATTGCAC +
Preference number: 4 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHCGKDH*LGELLH
Trigger: GTGCAATAACTCTCCCAGCCAGTGGTCCTTTCCACA...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCTTGACTTTGGAGAGATaGAGCCGTTTGCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGLTLER*SRLLIL
Trigger: TAAAATCAGCAAACGGCTTCATCTCTCCAAAGTCAA...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCAGCAGCCCAGGCACTaGACAGTTTCTCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGQQPRH*TVSRCF
Trigger: AAAACAACGAGAAACTGTTCAGTGCCTGGGCTGCTG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCACCATCCTTCTGGATTaGGTTGTCACGTCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGTILLD*VVTSQS
Trigger: GCTTTGGGACGTGACAACTCAATCCAGAAGGATGGT...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACAAGAGACAGGGACATaGAGTTGTGGCGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QARVENRHFVHICIISCSQETGT*SCGVSG
Trigger: GCCAGAGACGCCACAACTTCATGTCCCTGTCTCTTG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCTCCTTCCTCTCCACGTaGACAAGTAGCTCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGSFLST*TSSSRV
Trigger: CACTCTAGAGCTACTTGTTCACGTGGAGAGGAAGGA...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTTATGCTCCAGCTATATaGACCAGGTACAGGCAAATA +
Preference number: 4 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSYAPAI*TRYRQI
Trigger: TATTTGCCTGTACCTGGTGCATATAGCTGGAGCATA...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCTCCTTCCGTACCTTCTaGAAGTATAGCTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTSFRTF*KYSSGS
Trigger: ACTTCCTGAGCTATACTTCCAGAAGGTACGGAAGGA...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCGGAGAGCACCTAGGATaGGTGTTCTCTAATGGGGGA +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSGEHLG*VFSNGG
Trigger: TCCCCCATTAGAGAACACCCATCCTAGGTGCTCTCC...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCCGCACGCAATCTGCTTaGGACAAAAAGTCTACAGGG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGRTQSA*DKKSTG
Trigger: CCCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCG...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GGGCCTGAACTCAATTATAGACTCTGTCAGGGCTGTTaGACTAAAGTGGCTAAGGGATCCCATATCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPELNYRLCQGC*TKVAKGSHIRS
Trigger: AGACCTGATATGGGATCCCTTAGCCACTTTAGTCAAACAGCCCTGACAGAGTCTATAATTGAGTTCAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCTCTAAAATGTACTCCTaGACCACAGCATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTSKMYS*TTACKM
Trigger: CATCTTGCATGCTGTGGTTCAGGAGTACATTTTAGA...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCTCTGTCAGGGCTGTTTaGCTAAAGTGGCTAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGSVRAV*LKWLRD
Trigger: ATCCCTTAGCCACTTTAGTCAAACAGCCCTGACAGA...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR TCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCAGAATGAGGGTTGCTTaGTGGCAAGATTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGRMRVA*WQDFSC
Trigger: GCAGCTGAAATCTTGCCATCAAGCAACCCTCATTCT...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCCATGAGAATGAGGGTTaGTTGATGGCAAGATTTCAG +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTHENEG*LMARFQ
Trigger: CTGAAATCTTGCCATCAAGCAACCCTCATTCTCATG...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAAAGCCAAATGCCTTaGCATTTACAACGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVQSQMP*HLQRAV
Trigger: CACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTG...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCCGAATTATTTCAGCTCTaGCAACACAGTCTGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SAVLKPNCPFTNVSAVQPELFQL*QHSLCQ
Trigger: TTGACACAGACTGTGTTGCCAGAGCTGAAATAATTC...GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCTCCTGCTGTGTCTGTTaGCTTCCCCACAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGSCCVC*LPHKCK
Trigger: CTTACATTTGTGGGGAAGCCAACAGACACAGCAGGA...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCTTCACTGGGGAGAACTaGTCTTCAGCCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSFTGEN*SSAFAR
Trigger: CCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAA...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCTTAGCACTTGGAGACTaGGAAGTAAAAGTAAACACC +
Preference number: 4 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSLALGD*EVKVNT
Trigger: GGTGTTTACTTTTACTTCCCAGTCTCCAAGTGCTAA...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp AAAGTGGCTAAGGGATCCCATATCAGGTCTGCTGTGTaGAAACCAAACTGCCCTTTTACCAACGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: KVAKGSHIRSAV*KPNCPFTNVSA
Trigger: AGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGCCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp CCCTCTGTTAGAGGAGAGAGCTTAGAACATCAAGAATaGAAGTTTGTGCACTTGTGCCATAGGCCCTTAAGC +
Preference number: 4 (lower is better)
Translates to: PSVRGESLEHQE*KFVHLCHRPLS
Trigger: GCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCTCTCTCCTCTAACAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCATTTGCATTATCAGTTaGTCAGGGCACCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSICIIS*SGHQQP
Trigger: AGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAAT...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCTGGTACATGCAGAACTaGAATCATATATCTCGTCAG +
Preference number: 4 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTWYMQN*NHISRQ
Trigger: CTGACGAGATATATGATTCCAGTTCTGCATGTACCA...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCAGAGGCCACAGTTGCTaGGGTAGGTTTACGTCTTTT +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSRGHSC*GRFTSF
Trigger: AAAAGACGTAAACCTACCCCAGCAACTGTGGCCTCT...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGGCAGAGGTGTCTATTaGGGTTTCTTAAATGTTGGG +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGGRGVY*GFLNVG
Trigger: CCCAACATTTAAGAAACCCCAATAGACACCTCTGCC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATTTGAATGCTTGTGAATaGCTGAAAAAGCAATGGCGA +
Preference number: 4 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHLNACE*LKKQWR
Trigger: TCGCCATTGCTTTTTCAGCCATTCACAAGCATTCAA...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCTTTGTTGTGGAATCCTaGGAGGAGATGCACTCTTTC +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSFVVES*EEMHSF
Trigger: GAAAGAGTGCATCTCCTCCCAGGATTCCACAACAAA...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp TCCAATAATCCTGAAAATCCTCTCCTGAGAAAAGGAACCATAAGCTCGGAAGGCGTGTTGAAACCAAACTaGCCTTTTACCAACGTTTCT +
Preference number: 4 (lower is better)
Translates to: SNNPENPLLRKGTISSEGVLKPN*PFTNVS
Trigger: AGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACAC...GCCTTCCGAGCTTATGGTTCCTTTTCTCAGGAGAGGATTTTCAGGATTATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GCCTATCTCAGGCAGGTATATGAACTGCTGTTTGGTTaGGTTTTGAATGCTTGTGAATGGCTGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AYLRQVYELLFG*VLNACEWLKKQ
Trigger: TTGCTTTTTCAGCCATTCACAAGCATTCAAAACCAAACCAAACAGCAGTTCATATACCTGCCTGAGATAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp CAGGCTAGAGTAGAAAACAGACACTTTGTCCACATTTGCATTATCAGTTGCTCACTCGTTGTTTTCATCTaGAAAGTAGAAGAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: QARVENRHFVHICIISCSLVVFI*KVEESS
Trigger: GCTAGACTCTTCTACTTTGCAGATGAAAACAACGAG...TGAGCAACTGATAATGCAAATGTGGACAAAGTGTCTGTTTTCTACTCTAGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR GCA 90 bp ATGACCAGTATTCCAAATGACACTACTATTCCTGCACCTACCAAGAACTACTCCAAAGAATTAGTTATGTaGAGACTTCCCTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: MTSIPNDTTIPAPTKNYSKELVM*RLPYLS
Trigger: TGAGAGGTAGGGAAGTCTGCACATAACTAATTCTTT...GGAGTAGTTCTTGGTAGGTGCAGGAATAGTAGTGTCATTTGGAATACTGGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
3UTR CAA 72 bp GAGAGCTTAGAACATCAAGAATTGAAGTTTGTGCACTaGTGCCATAGGCCCTTAAGCAAAAGAATTAGTTAT +
Preference number: 4 (lower is better)
Translates to: ESLEHQELKFVH*CHRPLSKRISY
Trigger: ATAACTAATTCTTTTGCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAATTCTTGATGTTCTAAGCTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 90 bp CAGTGCCGCAGCTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTaGGCGGCACACACCAGCAGCAGCACGCAGAGCCTGCAAAACAAA +
Preference number: 5 (lower is better)
Translates to: QCRSWEWMKRHMSQA*AAHTSSSTQSLQNK
Trigger: TTTGTTTTGCAGGCTCTGCGTGCTGCTGCTGGTGTGTGCCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 90 bp CGCTTTGCACTCTGCTCATTCCAGTATTCCCGCCAGTGCCGCAGCTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGGGCGGCACAC +
Preference number: 5 (lower is better)
Translates to: RFALCSFQYSRQCRS*EWMKRHMSQAWAAH
Trigger: GTGTGCCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 90 bp GGGACTCTCCGCTTTGCACTCTGCTCATTCCAGTATTCCCGCCAGTaGCGCAGCTGGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GTLRFALCSFQYSRQ*RSWEWMKRHMSQAW
Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCGGAGAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 90 bp CTGGCTGGTAGTCTGGGTGTGGCTGGGACTCTCCGCTTTGCACTCTaGTCATTCCAGTATTCCCGCCAGTGCCGCAGCTGGGAGTGGATG +
Preference number: 5 (lower is better)
Translates to: LAGSLGVAGTLRFAL*SFQYSRQCRSWEWM
Trigger: CATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCGGAGAGTCCCAGCCACACCCAGACTACCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp TCTGCAGCTAGAGATGAAGTCAAGGTAGTAAGTTTGGCCCCTGACGGGGCTGGCGTCAAGGTAGTAAGTTaGGCCCCTGACGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SAARDEVKVVSLAPDGAGVKVVS*APDGAG
Trigger: GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGAC...GCCAGCCCCGTCAGGGGCCAAACTTACTACCTTGACTTCATCTCTAGCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTCCGATGTCCGCATGGTaGTGGATGACGAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSREGSVNVARAEVSIGVPMSAW*WMTNSW
Trigger: CCAGGAGTTCGTCATCCACAACCATGCGGACATCGG...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ATCATCACTGCACCTCCAAGGAGGGGAGCGGGTAGCACAGATCCTTGGTCCACCGGAAGAGGAACTCAGTaGAGTACTGCAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: IITAPPRRGAGSTDPWSTGRGTQ*STAAAA
Trigger: TGCTGCTGCTGCAGTACTCAACTGAGTTCCTCTTCC...GGTGGACCAAGGATCTGTGCTACCCGCTCCCCTCCTTGGAGGTGCAGTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACATGAGGACCACCAAGGGCTGGGACTCTCCGCTTaGCACTCTGCTCATTCCAGT +
Preference number: 5 (lower is better)
Translates to: MIRDGRSLLAHPHEDHQGLGLSA*HSAHSS
Trigger: ACTGGAATGAGCAGAGTGCAAAGCGGAGAGTCCCAG...CCCTTGGTGGTCCTCATGTGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp TTACCTTTCTGGAGGTGCCTGCTGCGCAGTTTGCTCTGCTCTCGCTCTAAGCAGGACAGGGACATGAAGTaGTGGCGTCTCTGGCACGCA +
Preference number: 5 (lower is better)
Translates to: LPFWRCLLRSLLCSRSKQDRDMK*WRLWHA
Trigger: TGCGTGCCAGAGACGCCACAACTTCATGTCCCTGTC...CTGCTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCACCTCCAGAAAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAAGGCACCAAAAGGACTaGGAGGCCTTCTCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GLSTCGCCFAKYPSSPRERHQKD*EAFSSG
Trigger: ACCTGAAGAGAAGGCCTCCAAGTCCTTTTGGTGCCT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCCTCACTGGGACAACCTaGAGCTGGAGAGAGATCCTA +
Preference number: 5 (lower is better)
Translates to: EGARKAPIIYPESDSQSVLTGTT*SWREIL
Trigger: TAGGATCTCTCTCCAGCTCAAGGTTGTCCCAGTGAG...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS TCA 90 bp CGGCACACACCAGCAGCAGCACGCAGAGCCTGCAAAACAAAGTGTTaGAGTTCCCTTTCTCGGGATCAAATGCCTGGTTTTCCATGCGAG +
Preference number: 5 (lower is better)
Translates to: RHTPAAARRACKTKC*SSLSRDQMPGFPCE
Trigger: CTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAGGCTCTGCGTGCTGCTGCTGGTGTGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 90 bp ATCAGGCCCAGGCGGCTCAGGTTTAAGAGGTATGCTCCAGCTATATaGACCAGGTACAGGCAAATATACTGGAGCTGGCGGGGAATTTCC +
Preference number: 5 (lower is better)
Translates to: IRPRRLRFKRYAPAI*TRYRQIYWSWRGIS
Trigger: GGAAATTCCCCGCCAGCTCCAGTATATTTGCCTGTACCTGGTGCATATAGCTGGAGCATACCTCTTAAACCTGAGCCGCCTGGGCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CTGCTCACACTACCTCTCCAGCAACTGGCACAACGCAGGCACCTGGCACATCCCCTGTTTGGTTTGGTTTaGAATGCTTGTGAATGGCTG +
Preference number: 5 (lower is better)
Translates to: LLTLPLQQLAQRRHLAHPLFGLV*NACEWL
Trigger: CAGCCATTCACAAGCATTCAAAACCAAACCAAACAG...GGGATGTGCCAGGTGCCTGCGTTGTGCCAGTTGCTGGAGAGGTAGTGTGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAGCTCGAGTCACGGGACCCAACCGAGTTCACACCATCCTTCTGGATTGAGTTGATGGGGCTGAAGCCCTaGAGACTTAGTGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: ELESRDPTEFTPSFWIELMGLKP*RLSVSA
Trigger: TGCAGAAACACTAAGTCTCAAGGGCTTCAGCCCCAT...CAACTCAATCCAGAAGGATGGTGTGAACTCGGTTGGGTCCCGTGACTCGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCACGCACGCAATCTGCTaGGGACAAAAAGTCTACAGG +
Preference number: 5 (lower is better)
Translates to: EGARKAPIIYPESDSQSVTHAIC*GQKVYR
Trigger: CCTGTAGACTTTTTGTCCCAAGCAGATTGCGTGCGT...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCATTTGCATTATCAGTaGCTCAGGGCACCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSHLHYQ*LRAPAA
Trigger: GGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTACAGGTTTCGGCTGTTaGAGACGGAGCATCACAGGC +
Preference number: 5 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQATGFGC*RRSITG
Trigger: GCCTGTGATGCTCCGTCTCAAACAGCCGAAACCTGT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAACCAAAGCCAAATGCCTaGGCATTTACAACGAGCAGT +
Preference number: 5 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREPKPNA*AFTTSS
Trigger: ACTGCTCGTTGTAAATGCCAAGGCATTTGGCTTTGG...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GGGCTCTCCACCTGCGGCTGTTGCTTCGCAAAATATCCTTCCTCTCCACGTGAAAAGAACTACTCCCCTTaGCCTCAAAACAGAGTTCGG +
Preference number: 5 (lower is better)
Translates to: GLSTCGCCFAKYPSSPREKNYSP*PQNRVR
Trigger: CCGAACTCTGTTTTGAGGCAAAGGGGAGTAGTTCTT...TTCACGTGGAGAGGAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGGGCAGAGGTGTCTATaGGGGTTTCTTAAATGTTGG +
Preference number: 5 (lower is better)
Translates to: RSREGSVNVARAEVSIGVGQRCL*GFLKCW
Trigger: CCAACATTTAAGAAACCCCAATAGACACCTCTGCCC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGCCACGGAGTACAAGTaGAAAACCACACAGCAAAGT +
Preference number: 5 (lower is better)
Translates to: RSREGSVNVARAEVSIGVATEYK*KTTQQS
Trigger: ACTTTGCTGTGTGGTTTTCAACTTGTACTCCGTGGC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GGGCTTCTCTTAATAGGTATGCTTGTGGTTGGGCCACCTCACAGACTTCCACAGCTCCACCTGCGGCTGTaGCTTCGCAAAATATCCTTC +
Preference number: 5 (lower is better)
Translates to: GLLLIGMLVVGPPHRLPQLHLRL*LRKISF
Trigger: GAAGGATATTTTGCGAAGCAACAGCCGCAGGTGGAG...CTGTGGAAGTCTGTGAGGTGGCCCAACCACAAGCATACCTATTAAGAGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 90 bp GAGCCTGCAAAACAAAGTGTTGAAGTTCCCTTTCTCGGGATCAAATaGCTGGTTTTCCATGCGAGCCAGTCCAAAGCCAATGGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: EPAKQSVEVPFLGIK*LVFHASQSKANGQH
Trigger: GTGCTGGCCATTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 90 bp CTGCAAAACAAAGTGTTGAAGTTCCCTTTCTCGGGATCAAATGCCTaGTTTTCCATGCGAGCCAGTCCAAAGCCAATGGCCAGCACGGCA +
Preference number: 5 (lower is better)
Translates to: LQNKVLKFPFSGSNA*FSMRASPKPMASTA
Trigger: TGCCGTGCTGGCCATTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATTGCCTGCTGCGCAGTTaGCTCTGCTCTCGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHCLLRS*LCSRSK
Trigger: CTTAGAGCGAGAGCAGAGCAAACTGCGCAGCAGGCA...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ATGAGGCAGCTTTCACTGGGGAGAACTGGTCTTCAGCCTTTGCAAGGTGGAGCTAGAAGGGGAGTTGCCTaGATGAAAAGACCCATTTCC +
Preference number: 5 (lower is better)
Translates to: MRQLSLGRTGLQPLQGGARRGVA*MKRPIS
Trigger: GGAAATGGGTCTTTTCATCAAGGCAACTCCCCTTCT...AGCTCCACCTTGCAAAGGCTGAAGACCAGTTCTCCCCAGTGAAAGCTGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCTATGATGTAAGTGACTaGGAGAAGGGGAGTTGCCTT +
Preference number: 5 (lower is better)
Translates to: EGARKAPIIYPESDSQSVYDVSD*EKGSCL
Trigger: AAGGCAACTCCCCTTCTCCAAGTCACTTACATCATA...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAAGGGGCCAGAAAGGCGCCTATCATCTACCCAGAGAGTGACTCTCAGTCAGTCATCAGGTCTGCTGTGTaGAAACCAAACTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: EGARKAPIIYPESDSQSVIRSAV*KPNCPF
Trigger: AAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT...GACTGACTGAGAGTCACTCTCTGGGTAGATGATAGGCGCCTTTCTGGCCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ATCAGCACCAAGGAGATTATGATCCGAGATGGCCGCTCTCTTCTTGCCCATCCACTCTGTCAGGGCTGTTaGACTAAAGTGGCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: ISTKEIMIRDGRSLLAHPLCQGC*TKVAKG
Trigger: TCCCTTAGCCACTTTAGTCAAACAGCCCTGACAGAG...TGGATGGGCAAGAAGAGAGCGGCCATCTCGGATCATAATCTCCTTGGTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTGAGCACTCCATTGTCTaGACTCAAAAGCTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSREGSVNVARAEVSIGVEHSIV*TQKLSA
Trigger: TGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTC...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp TCCTGGGCAGCGGGGTTAGAAACAAATGGGGTGAAACTGTCACAATCCGTGTCCCTGCAAAACAAAGTGTaGAAGTTCCCTTTCTCGGGA +
Preference number: 5 (lower is better)
Translates to: SWAAGLETNGVKLSQSVSLQNKV*KFPFSG
Trigger: TCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAG...GGACACGGATTGTGACAGTTTCACCCCATTTGTTTCTAACCCCGCTGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCCCTGTTCTTAGCACTTaGGCCTTAGGGAGACTTGAG +
Preference number: 5 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSPVLST*ALGRLE
Trigger: CTCAAGTCTCCCTAAGGCCAAAGTGCTAAGAACAGG...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTTCTTTTCTCCTGCTCTaGGTGCATGGTGCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTSFLLL*VHGAEL
Trigger: GAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGA...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCTTGAAGTTTGTGCACTaGTGCCATAGGCCCTTAAGC +
Preference number: 5 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGLKFVH*CHRPLS
Trigger: GCTTAAGGGCCTATGGCACAAGTGCACAAACTTCAA...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTACTGGTCTTCAGCCTTaGCAAGGTGGAGCTAACACT +
Preference number: 5 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSTGLQP*QGGANT
Trigger: AGTGTTAGCTCCACCTTGCAAAGGCTGAAGACCAGT...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 90 bp AAGAGGTATGCTCCAGCTATATGCACCAGGTACAGGCAAATATACTaGAGCTGGCGGGGAATTTCCTCCTTCCGTACCTTCTGGAAGTAT +
Preference number: 5 (lower is better)
Translates to: KRYAPAICTRYRQIY*SWRGISSFRTFWKY
Trigger: ATACTTCCAGAAGGTACGGAAGGAGGAAATTCCCCGCCAGCTCCAGTATATTTGCCTGTACCTGGTGCATATAGCTGGAGCATACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 90 bp GTTCTTAGCACTTTGGCCTTAGGGAGACTTGAGTTTCTTAGTCCGTaGGGAGGTTCCGTTCTCTGCCTTCACCACTCCATTTTCATGGTA +
Preference number: 5 (lower is better)
Translates to: VLSTLALGRLEFLSP*GGSVLCLHHSIFMV
Trigger: TACCATGAAAATGGAGTGGTGAAGGCAGAGAACGGAACCTCCCCACGGACTAAGAAACTCAAGTCTCCCTAAGGCCAAAGTGCTAAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCAGAGGCTTCTTGGGTTaGTTAAGTATCCTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGRGFLG*LSILPS
Trigger: TGACGGAAGGATACTTAACAAACCCAAGAAGCCTCT...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp TCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGCAGCCCTCCTTCTGGATTGAGTaGTCACGTCCCAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SAVLKPNCPFTNVSAVQPSFWIE*SRPKAK
Trigger: TTTGGCTTTGGGACGTGACAACTCAATCCAGAAGGA...GGGCTGCACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCACCATCCTTCTGGATaGAGTTGTCACGTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTHHPSG*SCHVPK
Trigger: CTTTGGGACGTGACAACTCAATCCAGAAGGATGGTG...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTAAATGGCTTGGCACTTaGGGGCAGGAGAGAATGCAT +
Preference number: 5 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTKWLGT*GQERMH
Trigger: ATGCATTCTCTCCTGCCCCAAAGTGCCAAGCCATTT...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 90 bp TTAGGGAGACTTGAGTTTCTTAGTCCGTGGGGAGGTTCCGTTCTCTaGCTTCACCACTCCATTTTCATGGTAACCAGATTCCCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: LGRLEFLSPWGGSVL*LHHSIFMVTRFPLD
Trigger: ATCAAGAGGGAATCTGGTTACCATGAAAATGGAGTGGTGAAGGCAGAGAACGGAACCTCCCCACGGACTAAGAAACTCAAGTCTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTCTTCCCAGAGGCTTCTaGGGTTTGTTAAGTATCCTT +
Preference number: 5 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSLPRGF*GLLSIL
Trigger: AAGGATACTTAACAAACCCAAGAAGCCTCTGGGAAG...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CAGAGTGAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTGAGAATGAGGGTTGCTaGATGGCAAGATTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QSEGGRALHCLDSKAFSTENEGC*MARFQL
Trigger: CAGCTGAAATCTTGCCATCAAGCAACCCTCATTCTC...AGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTCACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CGGTCAAGAGAAGGATCTGTGAACGTGGCCAGGGCAGAGGTGTCTATTGGGGTTTTAGAACATCAAGAATaGAAGTTTGTGCACTTGTGC +
Preference number: 5 (lower is better)
Translates to: RSREGSVNVARAEVSIGVLEHQE*KFVHLC
Trigger: GCACAAGTGCACAAACTTCAATTCTTGATGTTCTAA...AACCCCAATAGACACCTCTGCCCTGGCCACGTTCACAGATCCTTCTCTTGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCAACGTTTCTGCTGTGAAAAGTCTACAGGGGTaGCCAAGCACGAAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: IRSAVLKPNCPFTNVSAVKSLQG*PSTKGY
Trigger: GTAGCCTTTCGTGCTTGGCAACCCCTGTAGACTTTT...CACAGCAGAAACGTTGGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp ACCACGGGTAGCTCTTCCCATTTCTGCAACCTTATCGTAGAGAGGGATGAAGGCGAACTGCTGTTTGGTTaGGTTTTGAATGCTTGTGAA +
Preference number: 5 (lower is better)
Translates to: TTGSSSHFCNLIVERDEGELLFG*VLNACE
Trigger: TTCACAAGCATTCAAAACCAAACCAAACAGCAGTTC...GCCTTCATCCCTCTCTACGATAAGGTTGCAGAAATGGGAAGAGCTACCCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GCTAAGGGATCCCATATCAGGTCTGCTGTGTTGAAACCAAACTGCCCTTTTACCTTGGGAAGTTATGCCTaGGGACATGAACAGACAAGT +
Preference number: 5 (lower is better)
Translates to: AKGSHIRSAVLKPNCPFTLGSYA*GHEQTS
Trigger: ACTTGTCTGTTCATGTCCCAAGGCATAACTTCCCAA...GGTAAAAGGGCAGTTTGGTTTCAACACAGCAGACCTGATATGGGATCCCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GAGGGAGGAAGAGCACTCCATTGTCTTGACTCAAAAGCTTTCAGCACTCCCTCTTGGAAGATAAGAATTTaGTTGTGGAATCCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EGGRALHCLDSKAFSTPSWKIRI*LWNPGR
Trigger: CCTCCCAGGATTCCACAACAAAATTCTTATCTTCCA...AGAGGGAGTGCTGAAAGCTTTTGAGTCAAGACAATGGAGTGCTCTTCCTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GTAGGTTTACGTCTTTTCTCCTGCTCTTGGTGCATGGTGCTGAGCTCTCAAGCTACACTTTGTCCACATTaGCATTATCAGTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VGLRLFSCSWCMVLSSQATLCPH*HYQLLR
Trigger: CCTGAGCAACTGATAATGCAAATGTGGACAAAGTGT...AGCTTGAGAGCTCAGCACCATGCACCAAGAGCAGGAGAAAAGACGTAAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp CTTTGTCCACATTTGCATTATCAGTTGCTCAGGGCACCAGCAGCCTTAGTTCATAATAGAAAGGCAGTCTaGGCTGTGACCTCGAACATA +
Preference number: 5 (lower is better)
Translates to: LCPHLHYQLLRAPAALVHNRKAV*AVTSNI
Trigger: TATGTTCGAGGTCACAGCCAAGACTGCCTTTCTATT...ATGAACTAAGGCTGCTGGTGCCCTGAGCAACTGATAATGCAAATGTGGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS-3UTR CAA 90 bp GACGGTGATGTCATGGGCACCACGCCAATCTTATTCCTGGACAATGACTTAAGCTCCTTGAGTTCCTTGTaGAAATTTGGTCCATATGAA +
Preference number: 5 (lower is better)
Translates to: DGDVMGTTPILFLDNDLSSLSSL*KFGPYE
Trigger: TTCATATGGACCAAATTTCAACAAGGAACTCAAGGA...GCTTAAGTCATTGTCCAGGAATAAGATTGGCGTGGTGCCCATGACATCACCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp TCATTCCAGTATTCCCGCCAGTGCCGCAGCTGGGAGTaGATGAAGCGCCACATGAGCCAGGCCTGGGCGGCA +
Preference number: 6 (lower is better)
Translates to: SFQYSRQCRSWE*MKRHMSQAWAA
Trigger: TGCCGCCCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp CTCTGCTCATTCCAGTATTCCCGCCAGTGCCGCAGCTaGGAGTGGATGAAGCGCCACATGAGCCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LCSFQYSRQCRS*EWMKRHMSQAW
Trigger: CCAGGCCTGGCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp AGTCTGGGTGTGGCTGGGACTCTCCGCTTTGCACTCTaGTCATTCCAGTATTCCCGCCAGTGCCGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLGVAGTLRFAL*SFQYSRQCRSW
Trigger: CCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCGGAGAGTCCCAGCCACACCCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp CGCTTTGCACTCTGCTCATTCCAGTATTCCCGCCAGTaGCGCAGCTGGGAGTGGATGAAGCGCCACATGAGC +
Preference number: 6 (lower is better)
Translates to: RFALCSFQYSRQ*RSWEWMKRHMS
Trigger: GCTCATGTGGCGCTTCATCCACTCCCAGCTGCGGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 72 bp TGGCTGGTAGTCTGGGTGTGGCTGGGACTCTCCGCTTaGCACTCTGCTCATTCCAGTATTCCCGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: WLVVWVWLGLSA*HSAHSSIPASA
Trigger: GGCACTGGCGGGAATACTGGAATGAGCAGAGTGCAAAGCGGAGAGTCCCAGCCACACCCAGACTACCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 90 bp CCTGGAAGGGGAGGTGCACATGCGGGTAGTCTTCCCAGAGGCTTCTaGGGTTTGTTAAGTATCCTTCCGTCACCACCACGTAGAAGCACC +
Preference number: 6 (lower is better)
Translates to: PGRGGAHAGSLPRGF*GLLSILPSPPRRST
Trigger: GGTGCTTCTACGTGGTGGTGACGGAAGGATACTTAACAAACCCAAGAAGCCTCTGGGAAGACTACCCGCATGTGCACCTCCCCTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS TCA 72 bp GTAGAAGAGTCTAGCCGTGTGGAAGAGGAACTCAGTTaGGTACTGCAGCAGCAGCAAGATCAGGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: VEESSRVEEELS*VLQQQQDQAQA
Trigger: CGCCTGGGCCTGATCTTGCTGCTGCTGCAGTACTCAACTGAGTTCCTCTTCCACACGGCTAGACTCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp AGTTCCCTTTCTCGGGATCAAATGCCTGGTTTTCCATaGGAGCCAGTCCAAAGCCAATGGCCAGCACGGCAA +
Preference number: 6 (lower is better)
Translates to: SSLSRDQMPGFP*EPVQSQWPARQ
Trigger: TTGCCGTGCTGGCCATTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 72 bp GGAGGTGCACATGCGGGTAGTCTTCCCAGAGGCTTCTaGGGTTTGTTAAGTATCCTTCCGTCACCACCACGT +
Preference number: 6 (lower is better)
Translates to: GGAHAGSLPRGF*GLLSILPSPPR
Trigger: ACGTGGTGGTGACGGAAGGATACTTAACAAACCCAAGAAGCCTCTGGGAAGACTACCCGCATGTGCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 90 bp GCGGCACACACCAGCAGCAGCACGCAGAGCCTGCAAAACAAAGTGTaGAAGTTCCCTTTCTCGGGATCAAATGCCTGGTTTTCCATGCGA +
Preference number: 6 (lower is better)
Translates to: AAHTSSSTQSLQNKV*KFPFSGSNAWFSMR
Trigger: TCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAGGCTCTGCGTGCTGCTGCTGGTGTGTGCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp AGGCGGCTCAGGTTTAAGAGGTATGCTCCAGCTATATaGACCAGGTACAGGCAAATATACTGGAGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: RRLRFKRYAPAI*TRYRQIYWSWR
Trigger: CCGCCAGCTCCAGTATATTTGCCTGTACCTGGTGCATATAGCTGGAGCATACCTCTTAAACCTGAGCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp GCTCCAGCTATATGCACCAGGTACAGGCAAATATACTaGAGCTGGCGGGGAATTTCCTCCTTCCGTACCTTC +
Preference number: 6 (lower is better)
Translates to: APAICTRYRQIY*SWRGISSFRTF
Trigger: GAAGGTACGGAAGGAGGAAATTCCCCGCCAGCTCCAGTATATTTGCCTGTACCTGGTGCATATAGCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 72 bp GCACATGCGGGTAGTCTTCCCAGAGGCTTCTTGGGTTaGTTAAGTATCCTTCCGTCACCACCACGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: AHAGSLPRGFLG*LSILPSPPRRS
Trigger: GCTTCTACGTGGTGGTGACGGAAGGATACTTAACAAACCCAAGAAGCCTCTGGGAAGACTACCCGCATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 72 bp TCGGCCCCCACCAAGAGGATTCCTGTTCTTAGCACTTaGGCCTTAGGGAGACTTGAGTTTCTTAGTCCGTGG +
Preference number: 6 (lower is better)
Translates to: SAPTKRIPVLST*ALGRLEFLSPW
Trigger: CCACGGACTAAGAAACTCAAGTCTCCCTAAGGCCAAAGTGCTAAGAACAGGAATCCTCTTGGTGGGGGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp GCTATATGCACCAGGTACAGGCAAATATACTGGAGCTaGCGGGGAATTTCCTCCTTCCGTACCTTCTGGAAG +
Preference number: 6 (lower is better)
Translates to: AICTRYRQIYWS*RGISSFRTFWK
Trigger: CTTCCAGAAGGTACGGAAGGAGGAAATTCCCCGCCAGCTCCAGTATATTTGCCTGTACCTGGTGCATATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp ACTTTGGCCTTAGGGAGACTTGAGTTTCTTAGTCCGTaGGGAGGTTCCGTTCTCTGCCTTCACCACTCCATT +
Preference number: 6 (lower is better)
Translates to: TLALGRLEFLSP*GGSVLCLHHSI
Trigger: AATGGAGTGGTGAAGGCAGAGAACGGAACCTCCCCACGGACTAAGAAACTCAAGTCTCCCTAAGGCCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CCA 72 bp AAAGTGTTGAAGTTCCCTTTCTCGGGATCAAATGCCTaGTTTTCCATGCGAGCCAGTCCAAAGCCAATGGCC +
Preference number: 6 (lower is better)
Translates to: KVLKFPFSGSNA*FSMRASPKPMA
Trigger: GGCCATTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS CAA 72 bp ACCAGCAGCAGCACGCAGAGCCTGCAAAACAAAGTGTaGAAGTTCCCTTTCTCGGGATCAAATGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: TSSSTQSLQNKV*KFPFSGSNAWF
Trigger: AAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTTTGCAGGCTCTGCGTGCTGCTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp CTTGAGTTTCTTAGTCCGTGGGGAGGTTCCGTTCTCTaGCTTCACCACTCCATTTTCATGGTAACCAGATTC +
Preference number: 6 (lower is better)
Translates to: LEFLSPWGGSVL*LHHSIFMVTRF
Trigger: GAATCTGGTTACCATGAAAATGGAGTGGTGAAGGCAGAGAACGGAACCTCCCCACGGACTAAGAAACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000182527.4
CDS GCA 72 bp AAACAAAGTGTTGAAGTTCCCTTTCTCGGGATCAAATaGCTGGTTTTCCATGCGAGCCAGTCCAAAGCCAAT +
Preference number: 6 (lower is better)
Translates to: KQSVEVPFLGIK*LVFHASQSKAN
Trigger: ATTGGCTTTGGACTGGCTCGCATGGAAAACCAGGCATTTGATCCCGAGAAAGGGAACTTCAACACTTTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000182527.4