Pregenerated sensors for TRAM1L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174599

Ensembl transcript IDs: ENST00000310754.5

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTTCCCGGATACTCACCGGCGAGCCGCAGCTGCCTCCCCCTGGCTaGTCCTCACAGCGCCGCCGCCACGGTAGCAGCTCCGGGGGCTCC	+
Preference number: 5 (lower is better) Translates to: ASRILTGEPQLPPPG*SSQRRRHGSSSGGS Trigger: GGAGCCCCCGGAGCTGCTACCGTGGCGGCGGCGCTGTGAGGAGCAGCCAGGGGGAGGCAGCTGCGGCTCGCCGGTGAGTATCCGGGAAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS TCA 90 bp	GAGCCCGTGGCTTGTTCCTCTGCTGCAGGGACAGCAACACTGTGCTaGAGAGTGAGAAACACGATGGATGCTTCTGCTGTTCCCTCGAAC	+
Preference number: 5 (lower is better) Translates to: EPVACSSAAGTATLC*RVRNTMDASAVPSN Trigger: GTTCGAGGGAACAGCAGAAGCATCCATCGTGTTTCTCACTCTTCAGCACAGTGTTGCTGTCCCTGCAGCAGAGGAACAAGCCACGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS TCA 90 bp	TGGCTTGTTCCTCTGCTGCAGGGACAGCAACACTGTGCTGAAGAGTaGGAAACACGATGGATGCTTCTGCTGTTCCCTCGAACACAAGCC	+
Preference number: 5 (lower is better) Translates to: WLVPLLQGQQHCAEE*ETRWMLLLFPRTQA Trigger: GGCTTGTGTTCGAGGGAACAGCAGAAGCATCCATCGTGTTTCTCACTCTTCAGCACAGTGTTGCTGTCCCTGCAGCAGAGGAACAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS GCA 90 bp	GTAGGCTTGGATCGTGCAACTGGACGACAGAACAGCAATTTTAGCTaGCAACACATTTACATTTCCAGTAAGGGCATCAGGATTCCGATT	+
Preference number: 5 (lower is better) Translates to: VGLDRATGRQNSNFS*QHIYISSKGIRIPI Trigger: AATCGGAATCCTGATGCCCTTACTGGAAATGTAAATGTGTTGGCAGCTAAAATTGCTGTTCTGTCGTCCAGTTGCACGATCCAAGCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS CCA 72 bp	GGGGGTTCTTGGTGCTCTTCTTACGGAGCCCCATGGTaGCGCTTCCCGGATACTCACCGGCGAGCCGCAGCT	+
Preference number: 6 (lower is better) Translates to: GGSWCSSYGAPW*RFPDTHRRAAA Trigger: AGCTGCGGCTCGCCGGTGAGTATCCGGGAAGCGCCACCATGGGGCTCCGTAAGAAGAGCACCAAGAACCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS GCA 72 bp	AGCAACACTGTGCTGAAGAGTGAGAAACACGATGGATaGTTCTGCTGTTCCCTCGAACACAAGCCCCAGCAG	+
Preference number: 6 (lower is better) Translates to: SNTVLKSEKHDG*FCCSLEHKPQQ Trigger: CTGCTGGGGCTTGTGTTCGAGGGAACAGCAGAAGCATCCATCGTGTTTCTCACTCTTCAGCACAGTGTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS TCA 72 bp	GCTTGTTCCTCTGCTGCAGGGACAGCAACACTGTGCTaGAGAGTGAGAAACACGATGGATGCTTCTGCTGTT	+
Preference number: 6 (lower is better) Translates to: ACSSAAGTATLC*RVRNTMDASAV Trigger: AACAGCAGAAGCATCCATCGTGTTTCTCACTCTTCAGCACAGTGTTGCTGTCCCTGCAGCAGAGGAACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS GCA 72 bp	ACTGTGCTGAAGAGTGAGAAACACGATGGATGCTTCTaGTGTTCCCTCGAACACAAGCCCCAGCAGGAAGAA	+
Preference number: 6 (lower is better) Translates to: TVLKSEKHDGCF*CSLEHKPQQEE Trigger: TTCTTCCTGCTGGGGCTTGTGTTCGAGGGAACAGCAGAAGCATCCATCGTGTTTCTCACTCTTCAGCACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS TCA 72 bp	AGGGCATCAGGATTCCGATTCTGCGATCCAGCCAGGTaGAACCCAACAGTGAGTACGGAAACAATTAAAGTC	+
Preference number: 6 (lower is better) Translates to: RASGFRFCDPAR*NPTVSTETIKV Trigger: GACTTTAATTGTTTCCGTACTCACTGTTGGGTTTCACCTGGCTGGATCGCAGAATCGGAATCCTGATGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310754.5
CDS CAA 72 bp	GAACACACTAAACTGACCAGACTCGTTAAACTTGTTTaGTTTCGCTTTGGTGAACTGCATTCTCTTGTTAAT	+
Preference number: 6 (lower is better) Translates to: EHTKLTRLVKLV*FRFGELHSLVN Trigger: ATTAACAAGAGAATGCAGTTCACCAAAGCGAAACAAAACAAGTTTAACGAGTCTGGTCAGTTTAGTGTGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310754.5

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