RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182606

Ensembl transcript IDs: ENST00000327628.10, ENST00000341421.7, ENST00000396175.5, ENST00000418790.5, ENST00000427771.1, ENST00000449246.5, ENST00000469506.3, ENST00000484786.5, ENST00000487159.5, ENST00000613405.4, ENST00000672026.1, ENST00000673621.2

Found 1254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATaGCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATGTGCTCA +
Preference number: 1 (lower is better)
Translates to: GRPCPSSGGRTRQQK*PAPSTATRAPGMCS
Trigger: TGAGCACATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp CAGCCAGGCTCAGTCTCCGTGGAGTGCATGGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: QPGSVSVECMVWPPA*ISSGWCCHKLELGL
Trigger: CAGCCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACTGAGCCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp AGTCTCCGTGGAGTGCATGGTGTGGCCACCGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCTGGAGTTGGGGCTGAGTTAAGGCCC +
Preference number: 1 (lower is better)
Translates to: SLRGVHGVATGVDFK*LVLPQAGVGAELRP
Trigger: GGGCCTTAACTCAGCCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp GGTGTTAGTGAAGGACTCAGCCAGGCTCAGTCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACA +
Preference number: 1 (lower is better)
Translates to: GVSEGLSQAQSPWSA*CGHRRGFQVAGAAT
Trigger: TGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACTGAGCCTGGCTGAGTCCTTCACTAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp GGACTCACGGGTGTTAGTGAAGGACTCAGCCAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: GLTGVSEGLSQAQSP*SAWCGHRRGFQVAG
Trigger: ACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACTGAGCCTGGCTGAGTCCTTCACTAACACCCGTGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp GGTGACGTCCTCGTGAGAGTGATGACAGTGCAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCC +
Preference number: 1 (lower is better)
Translates to: GDVLVRVMTVQGHFL*DRKKEQGGHKVSKS
Trigger: GGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTGCACTGTCATCACTCTCACGAGGACGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR GCA 90 bp CTCGTGCACTTGAACTCAAAGGAGGGTGGGGAGGATGTGGGTGTCTaGATAGGCGAGTTCGGCGGAGTAGAGGGGATCACAGCCATCTTG +
Preference number: 1 (lower is better)
Translates to: LVHLNSKEGGEDVGV*IGEFGGVEGITAIL
Trigger: CAAGATGGCTGTGATCCCCTCTACTCCGCCGAACTCGCCTATGCAGACACCCACATCCTCCCCACCCTCCTTTGAGTTCAAGTGCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 90 bp CTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACTTCCCTCAGG +
Preference number: 1 (lower is better)
Translates to: LTLSTRLRLETDTSV*LSLLRTFFSLTSLR
Trigger: CCTGAGGGAAGTGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR TCA 90 bp GTGAGGTGTCCGATGACACCCAGATGTGTTATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTAT +
Preference number: 1 (lower is better)
Translates to: VRCPMTPRCVMTRAA*QLVVCQPRNSLVSY
Trigger: ATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGTGTCATCGGACACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR GCA 90 bp TTAGCAGCCTTTCCTGCTCCCACTTTAAAGATCCCTGATGGGCCATaGACCTCCAAGATGGGCAGGGGAGCTACACCCATTGTTACAAAT +
Preference number: 1 (lower is better)
Translates to: LAAFPAPTLKIPDGP*TSKMGRGATPIVTN
Trigger: ATTTGTAACAATGGGTGTAGCTCCCCTGCCCATCTTGGAGGTGCATGGCCCATCAGGGATCTTTAAAGTGGGAGCAGGAAAGGCTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 90 bp GACCAGACCACCATGGATACAAATCCCAAGACAGAGGATGCCCCATaGCTTCCCCATGAAGCTTATCTGTCTGCCTGTGTCTCCATGATT +
Preference number: 1 (lower is better)
Translates to: DQTTMDTNPKTEDAP*LPHEAYLSACVSMI
Trigger: AATCATGGAGACACAGGCAGACAGATAAGCTTCATGGGGAAGGCATGGGGCATCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATaGTTGTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGT +
Preference number: 1 (lower is better)
Translates to: KVLKAKERTRRPQCT*LSFLGEFHGLCVHC
Trigger: ACAATGCACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR GCA 90 bp ATTTCTAAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTaGACATGCTTGTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTG +
Preference number: 1 (lower is better)
Translates to: ISKVLKAKERTRRPQ*TCLSFLGEFHGLCV
Trigger: CACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTTAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR CCA 90 bp TTATCTGTCTGCCTGTGTCTCCATGATTGCAGGCATAGAGCTACTTaGGACCTCCAGGATGATTTACTTAGCGATATGCTTTTTACATTC +
Preference number: 1 (lower is better)
Translates to: LSVCLCLHDCRHRAT*DLQDDLLSDMLFTF
Trigger: GAATGTAAAAAGCATATCGCTAAGTAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCCTGCAATCATGGAGACACAGGCAGACAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CCA 90 bp AAGAACCTCAGCTCTTTCCTGCCCTGTATTTCAAGGGGAGTGTTGTaGCCTTCACAAATGAAAATTATGAATCACAAAGATAAACGTCCT +
Preference number: 1 (lower is better)
Translates to: KNLSSFLPCISRGVL*PSQMKIMNHKDKRP
Trigger: AGGACGTTTATCTTTGTGATTCATAATTTTCATTTGTGAAGGCCACAACACTCCCCTTGAAATACAGGGCAGGAAAGAGCTGAGGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR TCA 90 bp ATTGAAGCTGGGAAAGTGAAAAGGCTGATGAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATTTTAATACAGCGTACAGGTAACAGA +
Preference number: 1 (lower is better)
Translates to: IEAGKVKRLMKCLKS*AFPGSILIQRTGNR
Trigger: TCTGTTACCTGTACGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGATTTCAGACATTTCATCAGCCTTTTCACTTTCCCAGCTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 90 bp GGCATAGAGCTACTTGGGACCTCCAGGATGATTTACTTAGCGATATaGTTTTTACATTCTAAGAATCAAAATGGTCCTGTAATTCCCAAT +
Preference number: 1 (lower is better)
Translates to: GIELLGTSRMIYLAI*FLHSKNQNGPVIPN
Trigger: ATTGGGAATTACAGGACCATTTTGATTCTTAGAATGTAAAAAGCATATCGCTAAGTAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CAA 90 bp GATCCCACCATGGTGGGGAAGCTGCGATTCCGCCGGATGCCACTATaGAGCTGCAGCCCACCGATGGCACTGGTGACAGTGGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: DPTMVGKLRFRRMPL*SCSPPMALVTVGHL
Trigger: CAGATGCCCCACTGTCACCAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCGGAATCGCAGCTTCCCCACCATGGTGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVMTRAA*QLVVCQ
Trigger: CTGGCACACCACGAGCTGTCACGCGGCACGGGTCAT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSMTRAA*QLVVCQ
Trigger: CTGGCACACCACGAGCTGTCACGCGGCACGGGTCAT...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp ACTTTGGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTaGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTC +
Preference number: 2 (lower is better)
Translates to: TLATPNLLTLSTRLR*ETDTSVWLSLLRTF
Trigger: GAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp TTCACCACTTTGGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGG +
Preference number: 2 (lower is better)
Translates to: FTTLATPNLLTLSTR*RLETDTSVWLSLLR
Trigger: CCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp GCTCGCCCTGAGTTCACCACTTTGGCCACCCCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ARPEFTTLATPNLLT*STRLRLETDTSVWL
Trigger: GAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAGAGGGCTCGTGCACTTaGACTCAAAGGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSEGSCT*TQRRVG
Trigger: CCCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTC...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCATGGTGGGGAAGCTaGGATTCCGCCGGATGCCAC +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPWWGS*DSAGCH
Trigger: GTGGCATCCGGCGGAATCGCAGCTTCCCCACCATGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 2 (lower is better)
Translates to: TQMCYDPCRVTARGVPATQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACCAGGGATGTGCTCATaGTGGTCGTGGACTCACGGG +
Preference number: 2 (lower is better)
Translates to: GALPVGSEERAGRTQGLQPGMCS*WSWTHG
Trigger: CCCGTGAGTCCACGACCACCATGAGCACATCCCTGG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp CACATGCTTGTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATaGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGGCCTAGGCTG +
Preference number: 2 (lower is better)
Translates to: HMLVFPRRVSWPMCA*SHLPARGEGRRPRL
Trigger: CAGCCTAGGCCTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGACATGGGCTCGCCCTaGGTTCACCACTTTGGCCAC +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVDMGSP*VHHFGH
Trigger: GTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR GCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACCGGTCTGGCTCTCGCTaGTGCGGACGTTCTTTTCTC +
Preference number: 2 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHRSGSR*CGRSFL
Trigger: GAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCG...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHVSCT*LRMEAP
Trigger: AGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGGGATGTGCTCATGGTaGTCGTGGACTCACGGGTGT +
Preference number: 2 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHGMCSW*SWTHGC
Trigger: ACACCCGTGAGTCCACGACCACCATGAGCACATCCC...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp TCCTCAGTCAAGGTGGGGACATGGGCTCGCCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTG +
Preference number: 2 (lower is better)
Translates to: SSVKVGTWARPEFTT*ATPNLLTLSTRLRL
Trigger: CAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGACTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGCTGGAGTTGGGGCTaGGTTAAGGCCCCTGCCTCG +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSWSWG*VKAPAS
Trigger: CGAGGCAGGGGCCTTAACTCAGCCCCAACTCCAGCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATTTCAAGTGGCTGGTaGTGCCACAAGCTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: TQMCYDPCRVTARGVPATISSGW*CHKLEL
Trigger: CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR GCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGACACGGCAGCAGAAATaGCCCGCTCCTTCAACAGCC +
Preference number: 2 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSTRQQK*PAPSTA
Trigger: GGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGT...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 2 (lower is better)
Translates to: GALPVGSEERAGRTQGLQQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 2 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGTGGAGTGCATGGTGTaGCCACCGGCGTGGATTTCA +
Preference number: 2 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSVECMV*PPAWIS
Trigger: TGAAATCCACGCCGGTGGCCACACCATGCACTCCAC...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGAAACGACTGTCCACTaGGGCAGAGCAGTGAAGGTC +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVETTVH*GRAVKV
Trigger: GACCTTCACTGCTCTGCCTCAGTGGACAGTCGTTTC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LFGELSTHQDARGESHRSQAQSP*SAWCGH
Trigger: GTGGCCACACCATGCACTCCACGGAGACTGAGCCTG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACCACCACCTGCCTTCCTaGCGGACACTGGTGCTGATG +
Preference number: 2 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHHHLPS*RTLVLM
Trigger: CATCAGCACCAGTGTCCGTCAGGAAGGCAGGTGGTG...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCGCGTGACAGCTCGTaGTGTGCCAGCCACGGAATT +
Preference number: 2 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPRDSS*CASHGI
Trigger: AATTCCGTGGCTGGCACACCACGAGCTGTCACGCGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPMTRAA*QLVVCQ
Trigger: CTGGCACACCACGAGCTGTCACGCGGCACGGGTCAT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGT +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMCYDP*RVTARG
Trigger: ACCACGAGCTGTCACGCGGCACGGGTCATAACACAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGGAACAAGGGCTGGTaGTGGCCCCGGGGGCCCACA +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGNKGW*WPRGPT
Trigger: TGTGGGCCCCCGGGGCCAGCACCAGCCCTTGTTCCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAATGGTGACAGCACCCTaGCCAGCCTCGGGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRMVTAP*PASGFR
Trigger: TCTGAAACCCGAGGCTGGCCAGGGTGCTGTCACCAT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACATGCACCTCCAAGATaGGCAGGGGAGCTACACCCA +
Preference number: 2 (lower is better)
Translates to: HTFNAWGQWVESARALFQHAPPR*AGELHP
Trigger: TGGGTGTAGCTCCCCTGCCCATCTTGGAGGTGCATG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTTGGGGACAGTGGGTaGAGTCAGCCAGAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLGDSG*SQPELF
Trigger: AAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTTCTGCACCACCACCTaGCTTCCTGACGGACACTGG +
Preference number: 2 (lower is better)
Translates to: SPKCLPTECSQADNSSWDFCTTT*LPDGHW
Trigger: CCAGTGTCCGTCAGGAAGGCAGGTGGTGGTGCAGAA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACAGAGGAGGGGTCCCTaGTCCTCAGTCAAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPQRRGP*SSVKVG
Trigger: CCCCACCTTGACTGAGGAGCAGGGACCCCTCCTCTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCATGCACCTCCAAGATaGGCAGGGGAGCTACACCCA +
Preference number: 2 (lower is better)
Translates to: SPKCLPTECSQADNSSWDHAPPR*AGELHP
Trigger: TGGGTGTAGCTCCCCTGCCCATCTTGGAGGTGCATG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATGGATTTCAAGTGGCTaGTGCTGCCACAAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVWISSG*CCHKLE
Trigger: CTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGA +
Preference number: 2 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSPWSA*CGHRRG
Trigger: TCCACGCCGGTGGCCACACCATGCACTCCACGGAGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACACCCAGATGTGTTATaGCCCGTGCCGCGTGACAGC +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPHPDVL*PVPRDS
Trigger: GCTGTCACGCGGCACGGGTCATAACACATCTGGGTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCAGCTGCACGTGGCTaGGGATGGAGGCTCCTTACG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSAARG*GWRLLT
Trigger: CGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCACCACCTGCCTTCCTaGCGGACACTGGTGCTGATG +
Preference number: 2 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFHHLPS*RTLVLM
Trigger: CATCAGCACCAGTGTCCGTCAGGAAGGCAGGTGGTG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACTCCACAAAAGCTTTaGCTTCCCAACACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADTPQKL*LPNTRG
Trigger: GCCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFVWPPA*ISSGWC
Trigger: GCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGCCCTGTCCCAGCTCTaGGGGTCGTACACGGCAGCA +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTALSQL*GSYTAA
Trigger: TGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTTTAAAGATCCCTaGTGGGCCATGCACCTCCAA +
Preference number: 2 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSHFKDP*WAMHLQ
Trigger: TTGGAGGTGCATGGCCCATCAGGGATCTTTAAAGTG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCAGGAAGAAGGGCACTaGTGTTTTCAGGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSQEEGH*CFQGPK
Trigger: TTTGGGTCCCTGAAAACATCAGTGCCCTTCTTCCTG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp GACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTCAAGAAGCCAGCACATAAAACCTTaGACAGTTGAGCCATCTCCT +
Preference number: 2 (lower is better)
Translates to: DWPMRAANSKSRSFSSRSQHIKP*TVEPSP
Trigger: AGGAGATGGCTCAACTGTTCAAGGTTTTATGTGCTG...GCTTCTTGAGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418790.5
3UTR-3UTR GCA 90 bp CAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCAGACCACAGTGCACATaGTTGTCTTTCCTCGGCGAG +
Preference number: 2 (lower is better)
Translates to: QIVDSRSRAQNILHLPKARPQCT*LSFLGE
Trigger: CTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCT...GGCTTTTGGCAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCAAGTGGCTGGTGCTaGCACAAGCTGGAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSSGWC*HKLELG
Trigger: CCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGAGGGAGTGCACTGTaGGGGGAAGAGAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGGSAL*GEEREV
Trigger: CACCTCCCTCTCTTCCCCCCACAGTGCACTCCCTCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTGCTCAGCTCCACTTaGAAATCACCAGGGGACTTG +
Preference number: 2 (lower is better)
Translates to: KCLPTECSQADNSSWDSALLSST*KSPGDL
Trigger: CAAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCTGCTCAGCTCCACTTaGAAATCACCAGGGGACTTG +
Preference number: 2 (lower is better)
Translates to: SPKCLPTECSQADNSSWDLLSST*KSPGDL
Trigger: CAAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACACCTTTAATGCTTaGGGACAGTGGGTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSHTFNA*GQWVES
Trigger: TGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGAAACGACTGTCCACTaGGGCAGAGCAGTGAAGGTC +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPETTVH*GRAVKV
Trigger: GACCTTCACTGCTCTGCCTCAGTGGACAGTCGTTTC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACACTTTAAAGATCCCTaGTGGGCCATGCACCTCCAA +
Preference number: 2 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGHFKDP*WAMHLQ
Trigger: TTGGAGGTGCATGGCCCATCAGGGATCTTTAAAGTG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGT +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPMCYDP*RVTARG
Trigger: ACCACGAGCTGTCACGCGGCACGGGTCATAACACAT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTACTCCACAAAAGCTTTaGCTTCCCAACACAAGGGGC +
Preference number: 2 (lower is better)
Translates to: KCLPTECSQADNSSWDSATPQKL*LPNTRG
Trigger: GCCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAACCTCAGCTCTTTCCTaGCCTGTATTTCAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGTSALS*PVFQGE
Trigger: CTCCCCTTGAAATACAGGGCAGGAAAGAGCTGAGGT...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 2 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGCCACGGAATTCACTaGTTTCCTATCCATGGGATA +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSHGIH*FPIHGI
Trigger: TATCCCATGGATAGGAAACCAGTGAATTCCGTGGCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCCGCGTGACAGCTCGTaGTGTGCCAGCCACGGAATT +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTPRDSS*CASHGI
Trigger: AATTCCGTGGCTGGCACACCACGAGCTGTCACGCGG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTAGGGTCTTCTCTCTaGAAAAGCTTAGTGACGTTC +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLGSSL*KSLVTF
Trigger: GAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTCACACCTTTAATGCTTaGGGACAGTGGGTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: DPMIPRALSTKLFIPVATHTFNA*GQWVES
Trigger: TGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAGGCATAGAGCTACTTaGGACCTCCAGGATGATTTA +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADRHRAT*DLQDDL
Trigger: TAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCCT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCCAAGTAAAATCCCTTaGCCACAGCTGTCTGAAATT +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADPSKIP*PQLSEI
Trigger: AATTTCAGACAGCTGTGGTCAAGGGATTTTACTTGG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGACCTCAGCTCTTTCCTaGCCTGTATTTCAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQTSALS*PVFQGE
Trigger: CTCCCCTTGAAATACAGGGCAGGAAAGAGCTGAGGT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGGGACCAGACCACCATaGATACAAATCCCAAGACAG +
Preference number: 2 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQGTRPP*IQIPRQ
Trigger: CTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACAGGATGGAGCTGGCTaGCTTGGAAGCCAGGAAATT +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPQDGAG*LGSQEI
Trigger: AATTTCCTGGCTTCCAAGCCAGCCAGCTCCATCCTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR TCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCAGGAAGAAGGGCACTaGTGTTTTCAGGGACCCAAA +
Preference number: 2 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFQEEGH*CFQGPK
Trigger: TTTGGGTCCCTGAAAACATCAGTGCCCTTCTTCCTG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATT +
Preference number: 2 (lower is better)
Translates to: VHHLLSPKCLPTECSQADKCLKS*AFPGSI
Trigger: AATAGAACCAGGAAAGGCTCAGGATTTCAGACATTT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR GCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTTTAGCAGCCTTTCCTaGTCCCACTTTAAAGATCCC +
Preference number: 2 (lower is better)
Translates to: DPMIPRALSTKLFIPVATFSSLS*SHFKDP
Trigger: GGGATCTTTAAAGTGGGAGCAGGAAAGGCTGCTAAA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGCTGTGTCTCCATGATTaGAGGCATAGAGCTACTTGG +
Preference number: 2 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQLCLHD*RHRATW
Trigger: CCAAGTAGCTCTATGCCTGCAATCATGGAGACACAG...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAAGGCATAGAGCTACTTaGGACCTCCAGGATGATTTA +
Preference number: 2 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGRHRAT*DLQDDL
Trigger: TAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCCT...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AACGACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTCAAGATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 2 (lower is better)
Translates to: NDWPMRAANSKSRSFSSRYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...TCTTGAGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
3UTR-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCT +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGVDFK*LVLPQA
Trigger: AGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 90 bp GTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTaGTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCAC +
Preference number: 2 (lower is better)
Translates to: VLKAKERTRRPQCTC*SFLGEFHGLCVHCH
Trigger: GTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATCTCATTTACCTTCTaGATGACCCAGCACTCAATT +
Preference number: 2 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTISFTF*MTQHSI
Trigger: AATTGAGTGCTGGGTCATTCAGAAGGTAAATGAGAT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR GCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGTTTAGCAGCCTTTCCTaGTCCCACTTTAAAGATCCC +
Preference number: 2 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQFSSLS*SHFKDP
Trigger: GGGATCTTTAAAGTGGGAGCAGGAAAGGCTGCTAAA...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCTTGGGGACAGTGGGTaGAGTCAGCCAGAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHLGDSG*SQPELF
Trigger: AAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATT +
Preference number: 2 (lower is better)
Translates to: KCLPTECSQADNSSWDSAKCLKS*AFPGSI
Trigger: AATAGAACCAGGAAAGGCTCAGGATTTCAGACATTT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGACTAGAAGACCACAGTaGACATGCTTGTCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: THELTLKKGGLRRYKTHLTRRPQ*TCLSFL
Trigger: GAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGT...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATATCCTGAGCCTTTCCTaGTTCTATTTTAATACAGCG +
Preference number: 2 (lower is better)
Translates to: SPKCLPTECSQADNSSWDILSLS*FYFNTA
Trigger: CGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGAT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTCAAGGGGAGTGTTGTaGCCTTCACAAATGAAAATT +
Preference number: 2 (lower is better)
Translates to: SPKCLPTECSQADNSSWDSRGVL*PSQMKI
Trigger: AATTTTCATTTGTGAAGGCCACAACACTCCCCTTGA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATAAAGTGTCTCCCTACTaGGTGTTCCCAGGCAGACAA +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHKVSPY*VFPGRQ
Trigger: TTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAACTATAAATGTTCATaGCCCTCGTCAAATAACGTT +
Preference number: 2 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTNYKCS*PSSNNV
Trigger: AACGTTATTTGACGAGGGGCATGAACATTTATAGTT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACTCCGAAGGTTTATTTaGTTAAGGAGTATTGCTAAA +
Preference number: 2 (lower is better)
Translates to: HTFNAWGQWVESARALFQLRRFI*LRSIAK
Trigger: TTTAGCAATACTCCTTAACCAAATAAACCTTCGGAG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTACAGCCACCCCTTCCTaGACTCCAAATTGTAGACTC +
Preference number: 2 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNITATPS*TPNCRL
Trigger: GAGTCTACAATTTGGAGTCCAGGAAGGGGTGGCTGT...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR TCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCGTACAGGTAACAGATaGTCTCATTTACCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFRTGNR*SHLPSE
Trigger: TTCAGAAGGTAAATGAGATCATCTGTTACCTGTACG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCTGTGTCTCCATGATTaGAGGCATAGAGCTACTTGG +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHLCLHD*RHRATW
Trigger: CCAAGTAGCTCTATGCCTGCAATCATGGAGACACAG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACTCCGAAGGTTTATTTaGTTAAGGAGTATTGCTAAA +
Preference number: 2 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLRRFI*LRSIAK
Trigger: TTTAGCAATACTCCTTAACCAAATAAACCTTCGGAG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTATCCTGAGCCTTTCCTaGTTCTATTTTAATACAGCG +
Preference number: 2 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGILSLS*FYFNTA
Trigger: CGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGAT...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCTAGGGTCTTCTCTCTaGAAAAGCTTAGTGACGTTC +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHLGSSL*KSLVTF
Trigger: GAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCATCCCAGTGGCAACTaGAATGTGGGTAATTCTGTA +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHHPSGN*NVGNSV
Trigger: TACAGAATTACCCACATTCCAGTTGCCACTGGGATG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CCA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTCCTCGGCGAGTTTCATaGCCTATGTGTGCATTGTCA +
Preference number: 2 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVPRRVS*PMCALS
Trigger: TGACAATGCACACATAGGCCATGAAACTCGCCGAGG...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR CAA 90 bp ACCAAGAACCTCAGCTCTTTCCTGCCCTGTATTTCAAGGGGAGTGTaGTGGCCTTCACAAATGAAAATTATGAATCACAAAGATAAACGT +
Preference number: 2 (lower is better)
Translates to: TKNLSSFLPCISRGV*WPSQMKIMNHKDKR
Trigger: ACGTTTATCTTTGTGATTCATAATTTTCATTTGTGAAGGCCACAACACTCCCCTTGAAATACAGGGCAGGAAAGAGCTGAGGTTCTTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CAA 90 bp GGTCCCTTCTCTCTCTCTATCCTCCAAGGTAAGTTCTTTGTTGACTaGATAAGCTTTAGTCCTTCTGTACAACTTCTAGAAGATGCACTT +
Preference number: 2 (lower is better)
Translates to: GPFSLSILQGKFFVD*ISFSPSVQLLEDAL
Trigger: AAGTGCATCTTCTAGAAGTTGTACAGAAGGACTAAAGCTTATCAAGTCAACAAAGAACTTACCTTGGAGGATAGAGAGAGAGAAGGGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATAATTTGCCACAGGTTTaGGTACAGAGAGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHNLPQV*VQREQA
Trigger: TGCTTGTTCTCTCTGTACTCAAACCTGTGGCAAATT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATATCTCATTTACCTTCTaGATGACCCAGCACTCAATT +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHISFTF*MTQHSI
Trigger: AATTGAGTGCTGGGTCATTCAGAAGGTAAATGAGAT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR GCA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTCCATTTAATAGAGTTTaGTTGGAACCTCTCCCCGAC +
Preference number: 2 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVPFNRV*LEPLPD
Trigger: GTCGGGGAGAGGTTCCAAGCAAACTCTATTAAATGG...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR GCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTACAAAAGCCACAACCTTaGTATATGAAGTTCAAATCA +
Preference number: 2 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLQKPQP*YMKFKS
Trigger: TGATTTGAACTTCATATAGCAAGGTTGTGGCTTTTG...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATAACTATAAATGTTCATaGCCCTCGTCAAATAACGTT +
Preference number: 2 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHNYKCS*PSSNNV
Trigger: AACGTTATTTGACGAGGGGCATGAACATTTATAGTT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 72 bp TGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATaGCCCGCTCCTTCAACAGCCACACGAGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: CPSSGGRTRQQK*PAPSTATRAPG
Trigger: CCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR TCA 72 bp CCTCCGATCAGGAAAGCCACGTCAGCTGCACGTGGCTaGGGATGGAGGCTCCTTACGCTCCTACAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: PPIRKATSAARG*GWRLLTLLQGG
Trigger: CCCACCCTGTAGGAGCGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTGGCTTTCCTGATCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR GCA 72 bp GGGAAGCTGCGATTCCGCCGGATGCCACTATTGAGCTaGAGCCCACCGATGGCACTGGTGACAGTGGGGCAT +
Preference number: 3 (lower is better)
Translates to: GKLRFRRMPLLS*SPPMALVTVGH
Trigger: ATGCCCCACTGTCACCAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCGGAATCGCAGCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 72 bp GGAGTGCATGGTGTGGCCACCGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCTGGAGTTGGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: GVHGVATGVDFK*LVLPQAGVGAE
Trigger: CTCAGCCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR TCA 72 bp CTGCTCCTCAGTCAAGGTGGGGACATGGGCTCGCCCTaGGTTCACCACTTTGGCCACCCCAAACCTCCTGAC +
Preference number: 3 (lower is better)
Translates to: LLLSQGGDMGSP*VHHFGHPKPPD
Trigger: GTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGACTGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR GCA 72 bp GAGGTGTCCGATGACACCCAGATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGTGTGCCAGCCACGGAA +
Preference number: 3 (lower is better)
Translates to: EVSDDTQMCYDP*RVTARGVPATE
Trigger: TTCCGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGTGTCATCGGACACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR CCA 72 bp AAGCCCTCCGATCAGGAAAGCCACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCTTACGCTCCTACAGGG +
Preference number: 3 (lower is better)
Translates to: KPSDQESHVSCT*LRMEAPYAPTG
Trigger: CCCTGTAGGAGCGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTGGCTTTCCTGATCGGAGGGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR CCA 72 bp TCAGTCTCCGTGGAGTGCATGGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: SVSVECMVWPPA*ISSGWCCHKLE
Trigger: CTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR TCA 72 bp CCGATGACACCCAGATGTGTTATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAGCCACGGAATTCACTG +
Preference number: 3 (lower is better)
Translates to: PMTPRCVMTRAA*QLVVCQPRNSL
Trigger: CAGTGAATTCCGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGTGTCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAATGGAGCTGGCTGGCTaGGAAGCCAGGAAATTGTCG +
Preference number: 3 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSMELAG*EARKLS
Trigger: CGACAATTTCCTGGCTTCCAAGCCAGCCAGCTCCAT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTG +
Preference number: 3 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPEFTT*ATPNLL
Trigger: CAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CCA 72 bp CTCGTGAGAGTGATGACAGTGCAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTC +
Preference number: 3 (lower is better)
Translates to: LVRVMTVQGHFL*DRKKEQGGHKV
Trigger: GACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTGCACTGTCATCACTCTCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR CCA 72 bp TCCACGAGGTTGAGGTTGGAGACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACT +
Preference number: 3 (lower is better)
Translates to: STRLRLETDTSV*LSLLRTFFSLT
Trigger: AGTGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR GCA 72 bp TTGAACTCAAAGGAGGGTGGGGAGGATGTGGGTGTCTaGATAGGCGAGTTCGGCGGAGTAGAGGGGATCACA +
Preference number: 3 (lower is better)
Translates to: LNSKEGGEDVGV*IGEFGGVEGIT
Trigger: TGTGATCCCCTCTACTCCGCCGAACTCGCCTATGCAGACACCCACATCCTCCCCACCCTCCTTTGAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR TCA 72 bp AAGCCAGGAAATTGTCGTAGGGAGGGCTCGTGCACTTaGACTCAAAGGAGGGTGGGGAGGATGTGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: KPGNCRREGSCT*TQRRVGRMWVS
Trigger: AGACACCCACATCCTCCCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTCCCTACGACAATTTCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACG +
Preference number: 3 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVTLSTR*RLETDT
Trigger: CGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: LFGELSTHQDARGESHRSRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGGGATAAGAACACACTaGGGAGTTTCAGTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVGIRTH*GVSVLL
Trigger: GAGAAGCACTGAAACTCCCAAGTGTGTTCTTATCCC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACTGCTCAGCTCCACTaGGAAATCACCAGGGGACTT +
Preference number: 3 (lower is better)
Translates to: VHHLLSPKCLPTECSQADTAQLH*EITRGL
Trigger: AAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAGT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CCA 72 bp ACAGTGCACATGCTTGTCTTTCCTCGGCGAGTTTCATaGCCTATGTGTGCATTGTCACACCTGCCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: TVHMLVFPRRVS*PMCALSHLPAR
Trigger: TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR CAA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAACTGCTCAGCTCCACTaGGAAATCACCAGGGGACTT +
Preference number: 3 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTTAQLH*EITRGL
Trigger: AAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAGT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGACTCCACAAAAGCTTaGCCTTCCCAACACAAGGGG +
Preference number: 3 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSDSTKA*PSQHKG
Trigger: CCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGTC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGAGGGCTCGTGCACTaGAACTCAAAGGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGGLVH*NSKEGG
Trigger: CCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAATCACCAGGGGACTaGAGAATCTTCCCCTTAGAC +
Preference number: 3 (lower is better)
Translates to: VHHLLSPKCLPTECSQADKSPGD*RIFPLD
Trigger: GTCTAAGGGGAAGATTCTCAAGTCCCCTGGTGATTT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 72 bp ACCATGGATACAAATCCCAAGACAGAGGATGCCCCATaGCTTCCCCATGAAGCTTATCTGTCTGCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: TMDTNPKTEDAP*LPHEAYLSACV
Trigger: GACACAGGCAGACAGATAAGCTTCATGGGGAAGGCATGGGGCATCCTCTGTCTTGGGATTTGTATCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTGGGGAGCTACACCCATaGTTACAAATAGGAGGCATC +
Preference number: 3 (lower is better)
Translates to: DPMIPRALSTKLFIPVATGELHP*LQIGGI
Trigger: GATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCC...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAGGGGAGCTACACCCATaGTTACAAATAGGAGGCATC +
Preference number: 3 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGGELHP*LQIGGI
Trigger: GATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCC...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 72 bp TTAGGGTCTTGTTCTTCTTCAACAACGACTGGCCGATaGGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCT +
Preference number: 3 (lower is better)
Translates to: LGSCSSSTTTGR*ERPILNPALSP
Trigger: AGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAAGAACAAGACCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
3UTR CCA 72 bp CCTTGTTTCCCCCTGGAACCGGTTTGGTATTATGCCTaGTTGTGGTTCTTCCCCTCTACATTTGGTGTTGAC +
Preference number: 3 (lower is better)
Translates to: PCFPLEPVWYYA*LWFFPSTFGVD
Trigger: GTCAACACCAAATGTAGAGGGGAAGAACCACAACCAGGCATAATACCAAACCGGTTCCAGGGGGAAACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAAATCACCAGGGGACTaGAGAATCTTCCCCTTAGAC +
Preference number: 3 (lower is better)
Translates to: SPKCLPTECSQADNSSWDKSPGD*RIFPLD
Trigger: GTCTAAGGGGAAGATTCTCAAGTCCCCTGGTGATTT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATGGCCTATGTGTGCATaGTCACACCTGCCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLWPMCA*SHLPAR
Trigger: TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCA...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR-3UTR CAA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTTAATGGTGCTTCTTaGCACTTCCAGAACTCACCT +
Preference number: 3 (lower is better)
Translates to: KCLPTECSQADNSSWDSALNGAS*HFQNSP
Trigger: AGGTGAGTTCTGGAAGTGCAAAGAAGCACCATTAAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGAATTTGCCACAGGTTaGAGTACAGAGAGAACAAGC +
Preference number: 3 (lower is better)
Translates to: SPKCLPTECSQADNSSWDEFATG*STERTS
Trigger: GCTTGTTCTCTCTGTACTCAAACCTGTGGCAAATTC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCTTCCCCTCTACATTaGGTGTTGACACATTTCTTT +
Preference number: 3 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSSPLH*VLTHFF
Trigger: AAAGAAATGTGTCAACACCAAATGTAGAGGGGAAGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR-3UTR CAA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTATTTCAAGGGGAGTGTaGTGGCCTTCACAAATGAAA +
Preference number: 3 (lower is better)
Translates to: KCLPTECSQADNSSWDSAISRGV*WPSQMK
Trigger: TTTCATTTGTGAAGGCCACAACACTCCCCTTGAAAT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR GCA 72 bp AAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATaGTTGTCTTTCCTCGGCGAGTTTCATGGCCTATGT +
Preference number: 3 (lower is better)
Translates to: KAKERTRRPQCT*LSFLGEFHGLC
Trigger: ACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR GCA 72 bp GTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTaGACATGCTTGTCTTTCCTCGGCGAGTTTCATGGC +
Preference number: 3 (lower is better)
Translates to: VLKAKERTRRPQ*TCLSFLGEFHG
Trigger: GCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR CCA 72 bp TGCCTGTGTCTCCATGATTGCAGGCATAGAGCTACTTaGGACCTCCAGGATGATTTACTTAGCGATATGCTT +
Preference number: 3 (lower is better)
Translates to: CLCLHDCRHRAT*DLQDDLLSDML
Trigger: AAGCATATCGCTAAGTAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCCTGCAATCATGGAGACACAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGACTCCACAAAAGCTTaGCCTTCCCAACACAAGGGG +
Preference number: 3 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHDSTKA*PSQHKG
Trigger: CCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGTC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGATTTCAAGGGGAGTGTaGTGGCCTTCACAAATGAAA +
Preference number: 3 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQISRGV*WPSQMK
Trigger: TTTCATTTGTGAAGGCCACAACACTCCCCTTGAAAT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR-3UTR CAA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTCCACAGTGCACATGCTaGTCTTTCCTCGGCGAGTTT +
Preference number: 3 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVPQCTC*SFLGEF
Trigger: AAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGG...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR TCA 72 bp GGGAAAGTGAAAAGGCTGATGAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATTTTAATACAGCGTACA +
Preference number: 3 (lower is better)
Translates to: GKVKRLMKCLKS*AFPGSILIQRT
Trigger: TGTACGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGATTTCAGACATTTCATCAGCCTTTTCACTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CCA 72 bp AGCTCTTTCCTGCCCTGTATTTCAAGGGGAGTGTTGTaGCCTTCACAAATGAAAATTATGAATCACAAAGAT +
Preference number: 3 (lower is better)
Translates to: SSFLPCISRGVL*PSQMKIMNHKD
Trigger: ATCTTTGTGATTCATAATTTTCATTTGTGAAGGCCACAACACTCCCCTTGAAATACAGGGCAGGAAAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
3UTR CCA 72 bp GTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAACCTTGAACAGT +
Preference number: 3 (lower is better)
Translates to: VTASMSLYVLVI*PTLSAHKTLNS
Trigger: ACTGTTCAAGGTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR CCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTTCGGTTCCCTCCGCTaGAGCCGGCCGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATFGSLR*SRPGGT
Trigger: CGTGCCGCCCGGCCGGCTGCAGCGGAGGGAACCGAA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCTCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLSPWSA*CGHRRG
Trigger: TCCACGCCGGTGGCCACACCATGCACTCCACGGAGA...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCCCGCCTGCCGCTCTaGCGCTCCTGGGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATARLPL*RSWARS
Trigger: ACTCCGAGCCCAGGAGCGCCAGAGCGGCAGGCGGGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCGGGCAGTTGGGCAGATaGCCCCCGGTAGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLGQLGR*PPVVLV
Trigger: CACCAGAACTACCGGGGGCCATCTGCCCAACTGCCC...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCTCAGCTGCACGTGGCTaGGGATGGAGGCTCCTTACG +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLSAARG*GWRLLT
Trigger: CGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGA...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCCAGGGATGCCCAGGCTaGAGGCTAGGACTGCATGGT +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLQGCPG*RLGLHG
Trigger: ACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTG...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGGCCCGCCTGCCGCTCTaGCGCTCCTGGGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELARLPL*RSWARS
Trigger: ACTCCGAGCCCAGGAGCGCCAGAGCGGCAGGCGGGC...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCGAGGATGTGGGTGTCTaGATAGGCGAGTTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLEDVGV*IGEFGG
Trigger: TCCGCCGAACTCGCCTATGCAGACACCCACATCCTC...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCCGGTCTGGCTCTCGCTaGTGCGGACGTTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLRSGSR*CGRSFL
Trigger: GAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCG...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGGGGAACAAGGGCTGGTaGTGGCCCCGGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELGNKGW*WPRGPT
Trigger: TGTGGGCCCCCGGGGCCAGCACCAGCCCTTGTTCCC...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCCCTGCCTCGCCCGTaGGCTCAGACTCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPLPRP*AQTLCP
Trigger: AGGGCAGAGAGTCTGAGCCCACGGGCGAGGCAGGGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSGSPW*PHRAGG
Trigger: ACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCATCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSSGSPW*PHRAGG
Trigger: ACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGA...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCCCTGTCCCAGCTCTaGGGGTCGTACACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATALSQL*GSYTAA
Trigger: TGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGGGAACAAGGGCTGGTaGTGGCCCCGGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVGNKGW*WPRGPT
Trigger: TGTGGGCCCCCGGGGCCAGCACCAGCCCTTGTTCCC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCTCCTCAGTCAAGGTaGGGACATGGGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATAPQSR*GHGLAL
Trigger: CAGGGCGAGCCCATGTCCCCACCTTGACTGAGGAGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGCTCCTCAGTCAAGGTaGGGACATGGGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCAPQSR*GHGLAL
Trigger: CAGGGCGAGCCCATGTCCCCACCTTGACTGAGGAGC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGGAGGGAGTGCACTGTaGGGGGAAGAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCGGSAL*GEEREV
Trigger: CACCTCCCTCTCTTCCCCCCACAGTGCACTCCCTCC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGAGGGCTCGTGCACTTaGACTCAAAGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATEGSCT*TQRRVG
Trigger: CCCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQMTRAA*QLVVCQ
Trigger: CTGGCACACCACGAGCTGTCACGCGGCACGGGTCAT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CAGTCAAGGTGGGGACATGGGCTCGCCCTGAGTTCACCACTTTGGCCACCCCAAAGCTGGAGTTGGGGCTaGGTTAAGGCCCCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: QSRWGHGLALSSPLWPPQSWSWG*VKAPAS
Trigger: CGAGGCAGGGGCCTTAACTCAGCCCCAACTCCAGCT...TTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGACTGCATGGTTGCATaGCTCCGAAGGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATDCMVA*LRRGHG
Trigger: TCCGTGCCCCCTTCGGAGGCATGCAACCATGCAGTC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGACTGCATGGTTGCATaGCTCCGAAGGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCDCMVA*LRRGHG
Trigger: TCCGTGCCCCCTTCGGAGGCATGCAACCATGCAGTC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVWPPA*ISSGWC
Trigger: GCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATQAQSP*SAWCGH
Trigger: GTGGCCACACCATGCACTCCACGGAGACTGAGCCTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCCCTGTCCCAGCTCTaGGGGTCGTACACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQALSQL*GSYTAA
Trigger: TGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQTDTSV*LSLLRT
Trigger: CGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTCAAGGTGGGGACATaGGCTCGCCCTGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVKVGT*ARPEFT
Trigger: GGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCAGGTACCAGGCCTCTaGGAACAAGGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATQVPGL*EQGLVL
Trigger: CAGCACCAGCCCTTGTTCCCAGAGGCCTGGTACCTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATHVSCT*LRMEAP
Trigger: AGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAGGCGTTTGTCCGAATaGGCTTGCCGTGGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATRRLSE*ACRGRV
Trigger: GACTCTGCCACGGCAAGCTCATTCGGACAAACGCCT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR TCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTCAAGTGGCTGGTGCTaGCACAAGCTGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSSGWC*HKLELG
Trigger: CCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGACACGGCAGCAGAAATaGCCCGCTCCTTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATTRQQK*PAPSTA
Trigger: GGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGAGGATGTGGGTGTCTaGATAGGCGAGTTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATEDVGV*IGEFGG
Trigger: TCCGCCGAACTCGCCTATGCAGACACCCACATCCTC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACAGAGGAGGGGTCCCTaGTCCTCAGTCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQQRRGP*SSVKVG
Trigger: CCCCACCTTGACTGAGGAGCAGGGACCCCTCCTCTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTCTAGGACTGCATGGTTaGATGCCTCCGAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCLGLHG*MPPKGA
Trigger: TGCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAG...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTAGTGTTCCTCAGGGATaGCCAGGCTGCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCSVPQG*PGCRLG
Trigger: TCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACT...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACTCCTGCTGCCCGCCTaGCGCTCTGGCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRLLLPA*RSGAPG
Trigger: CCCAGGAGCGCCAGAGCGGCAGGCGGGCAGCAGGAG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGCACTTCCCAGGATaGTGCGCTGAGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMHFPG*CAEVSG
Trigger: CCCAGAGACCTCAGCGCACCATCCTGGGAAGTGCAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSPWSA*CGHRRG
Trigger: TCCACGCCGGTGGCCACACCATGCACTCCACGGAGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATCAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDQAQSP*SAWCGH
Trigger: GTGGCCACACCATGCACTCCACGGAGACTGAGCCTG...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCTCCTCAGTCAAGGTaGGGACATGGGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQAPQSR*GHGLAL
Trigger: CAGGGCGAGCCCATGTCCCCACCTTGACTGAGGAGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGGAGGGAGTGCACTGTaGGGGGAAGAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQGGSAL*GEEREV
Trigger: CACCTCCCTCTCTTCCCCCCACAGTGCACTCCCTCC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTATGGTGACAGCACCCTaGCCAGCCTCGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCMVTAP*PASGFR
Trigger: TCTGAAACCCGAGGCTGGCCAGGGTGCTGTCACCAT...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACTGCGCCCTGGCCTaGGCCGCAGACATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVHCALA*AADMPW
Trigger: CCAGGGCATGTCTGCGGCCCAGGCCAGGGCGCAGTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATCGTCGTGCAGAGCTGTaGCGTCCAGCTTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDRRAEL*RPAWQV
Trigger: AACCTGCCAAGCTGGACGCCACAGCTCTGCACGACG...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 72 bp ATGGTGGGGAAGCTGCGATTCCGCCGGATGCCACTATaGAGCTGCAGCCCACCGATGGCACTGGTGACAGTG +
Preference number: 4 (lower is better)
Translates to: MVGKLRFRRMPL*SCSPPMALVTV
Trigger: CACTGTCACCAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCGGAATCGCAGCTTCCCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGCCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTEPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGTGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTECQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTEGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTSGSPW*PHRAGG
Trigger: ACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGA...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSGSPW*PHRAGG
Trigger: ACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGCCGGATGCCACTATTaGGCTGCAGCCCACCGATGG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVAGCHY*AAAHRW
Trigger: CCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACACCCAGATGTGTTATaGCCCGTGCCGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQHPDVL*PVPRDS
Trigger: GCTGTCACGCGGCACGGGTCATAACACATCTGGGTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAAGCTCGGCTGTGAGCTaGCGCTGGGCATCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSSAVS*RWASLA
Trigger: TGCTAAGGATGCCCAGCGGCAGCTCACAGCCGAGCT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACACTTCCCAGGATGGTaGGCTGAGGTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQHFPGW*AEVSGC
Trigger: GCACCCAGAGACCTCAGCGCACCATCCTGGGAAGTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGAGCCCCAGGGATGTaGTCATGGTGGTCGTGGACT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRAPGM*SWWSWT
Trigger: AGTCCACGACCACCATGAGCACATCCCTGGGGCTCG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCAGAGGAGGGGTCCCTaGTCCTCAGTCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVQRRGP*SSVKVG
Trigger: CCCCACCTTGACTGAGGAGCAGGGACCCCTCCTCTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGGAACAAGGGCTGGTaGTGGCCCCGGGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGNKGW*WPRGPT
Trigger: TGTGGGCCCCCGGGGCCAGCACCAGCCCTTGTTCCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCCATGGTGGGGAAGCTaGGATTCCGCCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSPWWGS*DSAGCH
Trigger: GTGGCATCCGGCGGAATCGCAGCTTCCCCACCATGG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMCYDP*RVTARG
Trigger: ACCACGAGCTGTCACGCGGCACGGGTCATAACACAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACAGGGATGCCCAGGCTaGAGGCTAGGACTGCATGGT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQQGCPG*RLGLHG
Trigger: ACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGGAATCCGCAAGAGGTaGACGGAGCGCAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVGIRKR*TERNPA
Trigger: TGCCGGGTTGCGCTCCGTGCACCTCTTGCGGATTCC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGAATGAGCTTGCCGTaGCAGAGTCCTGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRMSLP*QSPGRG
Trigger: GCCTCTGCCAGGACTCTGCCACGGCAAGCTCATTCG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTTCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACTGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATGVDFK*LVLPQA
Trigger: AGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTGGATCACAGCCATCTTaGGCGTGTAGGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCGSQPS*ACRSAG
Trigger: TCCTGCACTCCTACACGCCCAAGATGGCTGTGATCC...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCAAGGTGGGGACATaGGCTCGCCCTGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVKVGT*ARPEFT
Trigger: GGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACAGGTACCAGGCCTCTaGGAACAAGGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQQVPGL*EQGLVL
Trigger: CAGCACCAGCCCTTGTTCCCAGAGGCCTGGTACCTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQHVSCT*LRMEAP
Trigger: AGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCGCTCTGGCGCTCCTaGGCTCGGAGTCCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPLWRS*ARSPGF
Trigger: GAACCCCGGACTCCGAGCCCAGGAGCGCCAGAGCGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
3UTR CAA 72 bp GTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATaGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: VFPRRVSWPMCA*SHLPARGEGRR
Trigger: CCTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR CAA 72 bp TTGGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACGTCGGTCTGGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LATPNLLTLSTR*RLETDTSVWLS
Trigger: CGAGAGCCAGACCGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
3UTR CAA 72 bp AAGGTGGGGACATGGGCTCGCCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTGACTTTGTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: KVGTWARPEFTT*ATPNLLTLSTR
Trigger: CCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGTGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTCAAGATGCCCGAGGTaGGAGTCACAGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSRCPR*ESQELS
Trigger: TGAAAGCTCCTGTGACTCTCACCTCGGGCATCTTGA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGACCCGTGCCGCGTaGCAGCTCGTGGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMTRAA*QLVVCQ
Trigger: CTGGCACACCACGAGCTGTCACGCGGCACGGGTCAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCACCCAGATGTGTTATaGCCCGTGCCGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSHPDVL*PVPRDS
Trigger: GCTGTCACGCGGCACGGGTCATAACACATCTGGGTG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGCTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAGCTCGGCTGTGAGCTaGCGCTGGGCATCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSSAVS*RWASLA
Trigger: TGCTAAGGATGCCCAGCGGCAGCTCACAGCCGAGCT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCACTTCCCAGGATGGTaGGCTGAGGTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHFPGW*AEVSGC
Trigger: GCACCCAGAGACCTCAGCGCACCATCCTGGGAAGTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAGTTGGTCTGAGACATaGACTTCCCAGGATGGTGCG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSWSET*TSQDGA
Trigger: CGCACCATCCTGGGAAGTGCATGTCTCAGACCAACT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTAGCTCATCTGAAGGATaGAGGATGCGACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCSSSEG*RMRQVV
Trigger: CACCACCTGTCGCATCCTGCATCCTTCAGATGAGCT...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGGTCTGGCTCTCGCTaGTGCGGACGTTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRSGSR*CGRSFL
Trigger: GAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDMCYDP*RVTARG
Trigger: ACCACGAGCTGTCACGCGGCACGGGTCATAACACAT...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAGCCGCTGGCGGCTCCTaGATCTCCTCTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQAAGGS*ISSGEA
Trigger: GGCTTCCCCAGAGGAGATGCAGGAGCCGCCAGCGGC...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTGGATTTCAAGTGGCTaGTGCTGCCACAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATWISSG*CCHKLE
Trigger: CTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTTGGATTTCAAGTGGCTaGTGCTGCCACAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCWISSG*CCHKLE
Trigger: CTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCA...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVVWPPA*ISSGWC
Trigger: GCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTGGAGTGCATGGTGTaGCCACCGGCGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVECMV*PPAWIS
Trigger: TGAAATCCACGCCGGTGGCCACACCATGCACTCCAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCAGGGATGTGCTCATaGTGGTCGTGGACTCACGGG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPGMCS*WSWTHG
Trigger: CCCGTGAGTCCACGACCACCATGAGCACATCCCTGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCCCTGTCCCAGCTCTaGGGGTCGTACACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVALSQL*GSYTAA
Trigger: TGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSTDTSV*LSLLRT
Trigger: CGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGT...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGCAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCGCGTGACAGCTCGTaGTGTGCCAGCCACGGAATT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPRDSS*CASHGI
Trigger: AATTCCGTGGCTGGCACACCACGAGCTGTCACGCGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCCGCGTGACAGCTCGTaGTGTGCCAGCCACGGAATT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSPRDSS*CASHGI
Trigger: AATTCCGTGGCTGGCACACCACGAGCTGTCACGCGG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTGTCACAGGACACCATaGTGTACAGTGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATCHRTP*CTVQPS
Trigger: TGAGGGCTGCACTGTACACCATGGTGTCCTGTGACA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACTCCTCCGTGGCCGCTaGCGGCTCCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQLLRGR*RLLHLL
Trigger: GAGGAGATGCAGGAGCCGCCAGCGGCCACGGAGGAG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCGTCGTGCAGAGCTGTaGCGTCCAGCTTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVRRAEL*RPAWQV
Trigger: AACCTGCCAAGCTGGACGCCACAGCTCTGCACGACG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAAAGGGGGCACGGAGTTaGCCAAAGTGTCGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSKGARS*PKCRRA
Trigger: TGCACGACGACACTTTGGCCAACTCCGTGCCCCCTT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACAGAGAGAGCCTCCATaGGAGCTCAGCCCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVQREPP*ELSPGS
Trigger: ACTGCCGGGGCTGAGCTCTCATGGAGGCTCTCTCTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCGGGAAACAGGCCCAGTaGGTGGTAGCGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSGKQAQ*VVAPRR
Trigger: ACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCC...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACCGAGTGAGCTCATCTaGAGGATGCAGGATGCGACA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQPSELI*RMQDAT
Trigger: TGTCGCATCCTGCATCCTTCAGATGAGCTCACTCGG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACCGAGTGAGCTCATCTaGAGGATGCAGGATGCGACA +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSPSELI*RMQDAT
Trigger: TGTCGCATCCTGCATCCTTCAGATGAGCTCACTCGG...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCCGGATGCCACTATTaGGCTGCAGCCCACCGATGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVAGCHY*AAAHRW
Trigger: CCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGAAACGACTGTCCACTaGGGCAGAGCAGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQETTVH*GRAVKV
Trigger: GACCTTCACTGCTCTGCCTCAGTGGACAGTCGTTTC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGACGGAGGCCTAGGCTaGGCACCACCCTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARDGGLG*APPSEE
Trigger: TTCCTCTGAGGGTGGTGCTCAGCCTAGGCCTCCGTC...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAACAGCCACCCTCCCGTaGCTTCCTCAGCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQTATLP*LPQQFS
Trigger: AGAAAACTGCTGAGGAAGGCACGGGAGGGTGGCTGT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTECVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGACACGGCAGCAGAAATaGCCCGCTCCTTCAACAGCC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVTRQQK*PAPSTA
Trigger: GGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCAGAGGAGGGGTCCCTaGTCCTCAGTCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSQRRGP*SSVKVG
Trigger: CCCCACCTTGACTGAGGAGCAGGGACCCCTCCTCTG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAATGCCACTATTGAGCTaGAGCCCACCGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSMPLLS*SPPMAL
Trigger: CAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCAT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAATGTGTTATGACCCGTaGCGCGTGACAGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQMCYDP*RVTARG
Trigger: ACCACGAGCTGTCACGCGGCACGGGTCATAACACAT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACCTGGGCCGCAGACATaGCCTGGCTCAGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVPGPQT*PGSAEV
Trigger: CACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTACCCAGAGGAGCCATaGAGGCCTGGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAYPEEP*RPGPPG
Trigger: CCCTGGGGGCCCAGGCCTGCATGGCTCCTCTGGGTA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAGCCGCTGGCGGCTCCTaGATCTCCTCTGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGAAGGS*ISSGEA
Trigger: GGCTTCCCCAGAGGAGATGCAGGAGCCGCCAGCGGC...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCTCCTGCTGCCCGCCTaGCGCTCTGGCGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLLLPA*RSGAPG
Trigger: CCCAGGAGCGCCAGAGCGGCAGGCGGGCAGCAGGAG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTCGGTTCCCTCCGCTaGAGCCGGCCGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFFGSLR*SRPGGT
Trigger: CGTGCCGCCCGGCCGGCTGCAGCGGAGGGAACCGAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CAGTCAAGGTGGGGACATGGGCTCGCCCTGAGTTCACCACTTTGGCCACCCCAATTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QSRWGHGLALSSPLWPPQFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...TTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSPWSA*CGHRRG
Trigger: TCCACGCCGGTGGCCACACCATGCACTCCACGGAGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGGGATGTGCTCATGGTaGTCGTGGACTCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVGMCSW*SWTHGC
Trigger: ACACCCGTGAGTCCACGACCACCATGAGCACATCCC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCCTGTCCCAGCTCTaGGGGTCGTACACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRALSQL*GSYTAA
Trigger: TGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRTDTSV*LSLLRT
Trigger: CGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCTCCTCAGTCAAGGTaGGGACATGGGCTCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVAPQSR*GHGLAL
Trigger: CAGGGCGAGCCCATGTCCCCACCTTGACTGAGGAGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCACAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACTCCTCCGTGGCCGCTaGCGGCTCCTGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLLRGR*RLLHLL
Trigger: GAGGAGATGCAGGAGCCGCCAGCGGCCACGGAGGAG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCAGGCTAGGACTGCATaGTTGCATGCCTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVQARTA*LHASEG
Trigger: CCCTTCGGAGGCATGCAACCATGCAGTCCTAGCCTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCAATTTGCTCGGTTGTaGGGTCAATGTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATQFARL*GQCWHL
Trigger: CAGATGCCAACATTGACCTCACAACCGAGCAAATTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATCCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGCTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGGGAAACAGGCCCAGTaGGTGGTAGCGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHGKQAQ*VVAPRR
Trigger: ACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGGAAACAGGCCCAGTaGGTGGTAGCGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGKQAQ*VVAPRR
Trigger: ACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSGSPW*PHRAGG
Trigger: ACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCGAGTGAGCTCATCTaGAGGATGCAGGATGCGACA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPSELI*RMQDAT
Trigger: TGTCGCATCCTGCATCCTTCAGATGAGCTCACTCGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCTTTGTCCACGAGGTTaGGGTTGGAGACGGACACGT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVLCPRG*GWRRTR
Trigger: ACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCTTTGTCCACGAGGTTaGGGTTGGAGACGGACACGT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSLCPRG*GWRRTR
Trigger: ACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGACATGGGCTCGCCCTaGGTTCACCACTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVDMGSP*VHHFGH
Trigger: GTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGAAACGACTGTCCACTaGGGCAGAGCAGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSETTVH*GRAVKV
Trigger: GACCTTCACTGCTCTGCCTCAGTGGACAGTCGTTTC...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGGGCCGAGGCCCCGCGTaGTCACCTTCCAGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: THELTLKKGGLRRYKTHLGRGPA*SPSSGF
Trigger: GAAGCCGCTGGAAGGTGATCACGCGGGGCCTCGGCC...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGCATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGTCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTTCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGAGCCCCAGGGATGTaGTCATGGTGGTCGTGGACT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRAPGM*SWWSWT
Trigger: AGTCCACGACCACCATGAGCACATCCCTGGGGCTCG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCTGGCTCTCGCTGCTaGGGACGTTCTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSGSRC*GRSFLS
Trigger: TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGATGCCACTATTGAGCTaGAGCCCACCGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVMPLLS*SPPMAL
Trigger: CAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCAT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCATGGTGGGGAAGCTaGGATTCCGCCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPWWGS*DSAGCH
Trigger: GTGGCATCCGGCGGAATCGCAGCTTCCCCACCATGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGACAGGAGCTTTCATCTaGATGCTAGATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATTGAFI*MLDPTM
Trigger: CATGGTGGGATCTAGCATGCAGATGAAAGCTCCTGT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGACCGGTTTGGTATTATaGCTGGTTGTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATTGLVL*LVVVLP
Trigger: GGGAAGAACCACAACCAGGCATAATACCAAACCGGT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGAATCCGCAAGAGGTaGACGGAGCGCAACCCGGCA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGIRKR*TERNPA
Trigger: TGCCGGGTTGCGCTCCGTGCACCTCTTGCGGATTCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACTGGGCTCAGACTCTCTaGCCTATATCTCCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHWAQTL*PISPLS
Trigger: GCTGAGAGGAGATATAGGGCAGAGAGTCTGAGCCCA...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTEAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVWPPA*ISSGWC
Trigger: GCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVQAQSP*SAWCGH
Trigger: GTGGCCACACCATGCACTCCACGGAGACTGAGCCTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCAGGTACCAGGCCTCTaGGAACAAGGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSQVPGL*EQGLVL
Trigger: CAGCACCAGCCCTTGTTCCCAGAGGCCTGGTACCTG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGAGGGAGTGCACTGTaGGGGGAAGAGAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGGSAL*GEEREV
Trigger: CACCTCCCTCTCTTCCCCCCACAGTGCACTCCCTCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVHVSCT*LRMEAP
Trigger: AGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTCACATGGTTGGACTaGAATGCCACAGACACACTA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVTWLD*NATDTL
Trigger: TAGTGTGTCTGTGGCATTCCAGTCCAACCATGTGAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATGTCACAGGACACCATaGTGTACAGTGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQCHRTP*CTVQPS
Trigger: TGAGGGCTGCACTGTACACCATGGTGTCCTGTGACA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCTTCCATAAATGTCTaGAACACGGTGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPSINV*NTVSQD
Trigger: GTCCTGTGACACCGTGTTCCAGACATTTATGGAAGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACACTGCGCCCTGGCCTaGGCCGCAGACATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLHCALA*AADMPW
Trigger: CCAGGGCATGTCTGCGGCCCAGGCCAGGGCGCAGTG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGGAGCCATGCAGGCCTaGGCCCCCAGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQGAMQA*APRAHT
Trigger: AGTGTGTGCCCTGGGGGCCCAGGCCTGCATGGCTCC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTGTCATGCTGCCTGTaGGTTGGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVSCCL*VGFLSS
Trigger: TGAAGAGAGGAAGCCAACCCACAGGCAGCATGACAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGGCAGTTGGGCAGATaGCCCCCGGTAGTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGQLGR*PPVVLV
Trigger: CACCAGAACTACCGGGGGCCATCTGCCCAACTGCCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
3UTR CAA 72 bp GAGTTCACCACTTTGGCCACCCCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTGGAGACGGACACGTCG +
Preference number: 4 (lower is better)
Translates to: EFTTLATPNLLT*STRLRLETDTS
Trigger: CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGACATGGGCTCGCCCTaGGTTCACCACTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRDMGSP*VHHFGH
Trigger: GTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCAGCTGCACGTGGCTaGGGATGGAGGCTCCTTACG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSAARG*GWRLLT
Trigger: CGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAAGCTCGGCTGTGAGCTaGCGCTGGGCATCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQSSAVS*RWASLA
Trigger: TGCTAAGGATGCCCAGCGGCAGCTCACAGCCGAGCT...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTRGSLG*PASPAS
Trigger: AGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGTCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCTCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGAGCTCATCTGAAGGATaGAGGATGCGACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSSSEG*RMRQVV
Trigger: CACCACCTGTCGCATCCTGCATCCTTCAGATGAGCT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAATTTCAAGTGGCTGGTaGTGCCACAAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSISSGW*CHKLEL
Trigger: CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAAT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACGAGCCCCAGGGATGTaGTCATGGTGGTCGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRRAPGM*SWWSWT
Trigger: AGTCCACGACCACCATGAGCACATCCCTGGGGCTCG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCTGGCTCTCGCTGCTaGGGACGTTCTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSGSRC*GRSFLS
Trigger: TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGGTCTGGCTCTCGCTaGTGCGGACGTTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRSGSR*CGRSFL
Trigger: GAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATACAGGAGCTTTCATCTaGATGCTAGATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDTGAFI*MLDPTM
Trigger: CATGGTGGGATCTAGCATGCAGATGAAAGCTCCTGT...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGGACACATCTTCTGCTaGCGGGGAGGACACAGCATG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVGHIFC*RGGHSM
Trigger: CATGCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGAAGGACACATCTTCTaGTGCCGGGGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVEGHIF*CRGGHS
Trigger: GCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCCTTC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACCTGGGCCGCAGACATaGCCTGGCTCAGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGPGPQT*PGSAEV
Trigger: CACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTACCCAGAGGAGCCATaGAGGCCTGGGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFYPEEP*RPGPPG
Trigger: CCCTGGGGGCCCAGGCCTGCATGGCTCCTCTGGGTA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCAAAGTGTCGTCGTaGAGAGCTGTGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRAKVSS*RAVASS
Trigger: GCTGGACGCCACAGCTCTGCACGACGACACTTTGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGTGTTCCTCAGGGATaGCCAGGCTGCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSVPQG*PGCRLG
Trigger: TCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGCGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VWPPAWISSGWCCHKLELRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGCACTTCCCAGGATaGTGCGCTGAGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMHFPG*CAEVSG
Trigger: CCCAGAGACCTCAGCGCACCATCCTGGGAAGTGCAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTGGAGTGCATGGTGTaGCCACCGGCGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVECMV*PPAWIS
Trigger: TGAAATCCACGCCGGTGGCCACACCATGCACTCCAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCAGGATGGAGCTGGCTaGCTTGGAAGCCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVQDGAG*LGSQEI
Trigger: AATTTCCTGGCTTCCAAGCCAGCCAGCTCCATCCTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACAGGTACCAGGCCTCTaGGAACAAGGGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRQVPGL*EQGLVL
Trigger: CAGCACCAGCCCTTGTTCCCAGAGGCCTGGTACCTG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGAGCCACGGAATTCACTaGTTTCCTATCCATGGGATA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSHGIH*FPIHGI
Trigger: TATCCCATGGATAGGAAACCAGTGAATTCCGTGGCT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACACGTCAGCTGCACGTaGCTGAGGATGGAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRHVSCT*LRMEAP
Trigger: AGGAGCCTCCATCCTCAGCCACGTGCAGCTGACGTG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTTTCAGAAAAAGCGCTaGAGCCAGCGGAATACCAAA +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATFQKKR*SQRNTK
Trigger: TTTGGTATTCCGCTGGCTCCAGCGCTTTTTCTGAAA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTGTCACAGGACACCATaGTGTACAGTGCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVCHRTP*CTVQPS
Trigger: TGAGGGCTGCACTGTACACCATGGTGTCCTGTGACA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAGCACACACTGCGCCCTaGCCTGGGCCGCAGACATGC +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLAHTAP*PGPQTC
Trigger: GCATGTCTGCGGCCCAGGCCAGGGCGCAGTGTGTGC...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGCACACACTGCGCCCTaGCCTGGGCCGCAGACATGC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPAHTAP*PGPQTC
Trigger: GCATGTCTGCGGCCCAGGCCAGGGCGCAGTGTGTGC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGAGCCATGCAGGCCTaGGCCCCCAGGGCACACACT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGAMQA*APRAHT
Trigger: AGTGTGTGCCCTGGGGGCCCAGGCCTGCATGGCTCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGATGCTGCCTGTGGGTTaGCTTCCTCTCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVMLPVG*LPLFIL
Trigger: CAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCAT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAAACCAGCAGCGCGGGTaGCTGTCGCGGAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARNQQRG*LSRKKK
Trigger: CTTTTTCTTCCGCGACAGCCACCCGCGCTGCTGGTT...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAAGGGGGCACGGAGTTaGCCAAAGTGTCGTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVKGARS*PKCRRA
Trigger: TGCACGACGACACTTTGGCCAACTCCGTGCCCCCTT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCGCTCAACGGGGCATATaGCTGCTTCGTCGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSAQRGI*LLRRPP
Trigger: AGGAGGACGACGAAGCAGCCATATGCCCCGTTGAGC...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAACTGCTGCCAGTGGTaGAGTGTGGCGGAACCTTCC +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTNCCQW*SVAEPS
Trigger: GGAAGGTTCCGCCACACTTCACCACTGGCAGCAGTT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAGAGGTCTCTGGGTGCTaGACTGGAGTGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTEVSGC*TGVEVA
Trigger: AGCTACCTCCACTCCAGTTCAGCACCCAGAGACCTC...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACCGAGTGAGCTCATCTaGAGGATGCAGGATGCGACA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVPSELI*RMQDAT
Trigger: TGTCGCATCCTGCATCCTTCAGATGAGCTCACTCGG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGCTGGAGTTGGGGCTaGGTTAAGGCTTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSWSWG*VKAWCD
Trigger: GTCACACCAAGCCTTAACTCAGCCCCAACTCCAGCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR TCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCCTTGTTGCATTCATaGTTCTTTTCACAAGCACCT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPLLHS*FFSQAP
Trigger: AGGTGCTTGTGAAAAGAATCATGAATGCAACAAGGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCACCACCTGCCTTCCTaGCGGACACTGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDHHLPS*RTLVLM
Trigger: CATCAGCACCAGTGTCCGTCAGGAAGGCAGGTGGTG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCCCATGCCTTCCCCATaGAGCTTATCTGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADPMPSP*SLSVCL
Trigger: CAGGCAGACAGATAAGCTTCATGGGGAAGGCATGGG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGAAGATCGGTGCTGTTaGACACATCACAGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVEDRCC*THHRRL
Trigger: CAAACGCCTGTGATGTGTGCAACAGCACCGATCTTC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGCTCGGCTGTGAGCTaGCGCTGGGCATCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDSSAVS*RWASLA
Trigger: TGCTAAGGATGCCCAGCGGCAGCTCACAGCCGAGCT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGAGCTCGGCTGTGAGCTaGCGCTGGGCATCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRSSAVS*RWASLA
Trigger: TGCTAAGGATGCCCAGCGGCAGCTCACAGCCGAGCT...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACTCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCAAGTGGCTGGTGCTaGCACAAGCTGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSSGWC*HKLELG
Trigger: CCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGATTTCAAGTGGCTGGTaGTGCCACAAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVISSGW*CHKLEL
Trigger: CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAAT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGCCACTATTGAGCTaGAGCCCACCGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMPLLS*SPPMAL
Trigger: CAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAACCGGTTTGGTATTATaGCTGGTTGTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQTGLVL*LVVVLP
Trigger: GGGAAGAACCACAACCAGGCATAATACCAAACCGGT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGACACATCTTCTGCTaGCGGGGAGGACACAGCATG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGHIFC*RGGHSM
Trigger: CATGCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGAAGGACACATCTTCTaGTGCCGGGGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIREGHIF*CRGGHS
Trigger: GCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCCTTC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACAGGACTTATCGTGGTaGCCTCACCAGACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTQDLSW*PHQTPP
Trigger: AGGAGGGGTCTGGTGAGGGCACCACGATAAGTCCTG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGGCGCTCAGAACATACTaGATCTGCCAAAAGCCACAA +
Preference number: 4 (lower is better)
Translates to: FMAYVCIVTPASQRGGTEALRTY*ICQKPQ
Trigger: TTGTGGCTTTTGGCAGATGCAGTATGTTCTGAGCGC...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCAACGGGGCATATGGCTaGTTCGTCGTCCTCCTCACA +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSNGAYG*FVVLLT
Trigger: TGTGAGGAGGACGACGAAGCAGCCATATGCCCCGTT...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGGTCATAACCGTAGATaGTGTCGGCTCTTAACTTAT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATGHNRR*CRLLTY
Trigger: ATAAGTTAAGAGCCGACACCATCTACGGTTATGACC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGAAATGAGAGGTGTATaGAGCCAGTCGTCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVEMRGV*SQSSWS
Trigger: TGACCACGACGACTGGCTCCATACACCTCTCATTTC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAATGCACTTCCCAGGATaGTGCGCTGAGGTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRMHFPG*CAEVSG
Trigger: CCCAGAGACCTCAGCGCACCATCCTGGGAAGTGCAT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATGTTTGGTATTATGCCTaGTTGTGGTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDVWYYA*LWFFPS
Trigger: AGAGGGGAAGAACCACAACCAGGCATAATACCAAAC...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACCTTCCATAAATGTCTaGAACACGGTGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQPSINV*NTVSQD
Trigger: GTCCTGTGACACCGTGTTCCAGACATTTATGGAAGG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACCCAACACAAGGGGCTaGGAGGTCCAGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTPNTRG*EVQSRQ
Trigger: CTGTCTAGACTGGACCTCCCAGCCCCTTGTGTTGGG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACCCAACACAAGGGGCTaGGAGGTCCAGTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQPNTRG*EVQSRQ
Trigger: CTGTCTAGACTGGACCTCCCAGCCCCTTGTGTTGGG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCCGCTCTGGCGCTCCTaGGCTCGGAGTCCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTPLWRS*ARSPGF
Trigger: GAACCCCGGACTCCGAGCCCAGGAGCGCCAGAGCGG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QIVDSRSRAQNILHLPKAETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...GGCTTTTGGCAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCACGCAGCTCGGCTGTaGGCTGCCGCTGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTHAARL*AAAGHP
Trigger: AGGATGCCCAGCGGCAGCTCACAGCCGAGCTGCGTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGGGAAACAGGCCCAGTaGGTGGTAGCGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFGKQAQ*VVAPRR
Trigger: ACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGGATGCCCCCAAGGTaGGGTTGGGCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRMPPR*GWANCC
Trigger: GCAGCAGTTGGCCCAACCTCACCTTGGGGGCATCCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACTTTGTCCACGAGGTTaGGGTTGGAGACGGACACGT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRLCPRG*GWRRTR
Trigger: ACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCCGGATGCCACTATTaGGCTGCAGCCCACCGATGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFAGCHY*AAAHRW
Trigger: CCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGCCGGATGCCACTATTaGGCTGCAGCCCACCGATGG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPAGCHY*AAAHRW
Trigger: CCATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCAAGATGCCCGAGGTaGGAGTCACAGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSRCPR*ESQELS
Trigger: TGAAAGCTCCTGTGACTCTCACCTCGGGCATCTTGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATATGCCCTGGCTCAGCTaGAGTGGAGGGGTGTACACA +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDMPWLS*SGGVYT
Trigger: TGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCAT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR TCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGATTGGGACCTCTCACCTaGGGTCTCTGGGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLGPLT*GLWVLN
Trigger: GTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCAA...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGCACCACCTGCCTTCCTaGCGGACACTGGTGCTGATG +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQHHLPS*RTLVLM
Trigger: CATCAGCACCAGTGTCCGTCAGGAAGGCAGGTGGTG...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTCAAGAAGCGCCAAAAGACTCAACTaGGGAAGTGCATCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: DWPMRAANSKSRSFSSRSAKRLN*GSASEH
Trigger: ATGCTCGGATGCACTTCCTCAGTTGAGTCTTTTGGC...GCTTCTTGAGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGACGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR GCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAGCTCATCTGAAGGATaGAGGATGCGACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSSSEG*RMRQVV
Trigger: CACCACCTGTCGCATCCTGCATCCTTCAGATGAGCT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCTGGCTCTCGCTGCTaGGGACGTTCTTTTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSGSRC*GRSFLS
Trigger: TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAATGCCACTATTGAGCTaGAGCCCACCGATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRMPLLS*SPPMAL
Trigger: CAGTGCCATCGGTGGGCTGCAGCTCAATAGTGGCAT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTAGGTCCTGGGTGTCATaGTGCCTGTGGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSARSWVS*CLWVGF
Trigger: GAAGCCAACCCACAGGCAGCATGACACCCAGGACCT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACTCGGGTAACTTCTGCTaGCTGAGACAGTCACACGTG +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADSGNFC*LRQSHV
Trigger: CACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGA...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCGTCAAGTAAAACGCTaGCATGCCTCCCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDRQVKR*HASPPF
Trigger: GAAGGGCGGGGAGGCATGGCAGCGTTTTACTTGACG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR CCA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATGGTCATAACCGTAGATaGTGTCGGCTCTTAACTTAT +
Preference number: 4 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDGHNRR*CRLLTY
Trigger: ATAAGTTAAGAGCCGACACCATCTACGGTTATGACC...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTAGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTGGTGAGTGATGTCTaGAGACTCGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLVSDV*RLGLFQ
Trigger: TTGGAAGAGGCCGAGTCTCCAGACATCACTCACCAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGATCACAGCCATCTTaGGCGTGTAGGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGSQPS*ACRSAG
Trigger: TCCTGCACTCCTACACGCCCAAGATGGCTGTGATCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACAGGGGCACTTCCTGTaGGATCGGAAGAAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRQGHFL*DRKKEQ
Trigger: CTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCCTG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAAGCCACGGAATTCACTaGTTTCCTATCCATGGGATA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSHGIH*FPIHGI
Trigger: TATCCCATGGATAGGAAACCAGTGAATTCCGTGGCT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCTTCCAAGAGGTCCTaGGTGTCATGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQSSKRS*VSCCLW
Trigger: CCACAGGCAGCATGACACCCAGGACCTCTTGGAAGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATCTTCCAAGAGGTCCTaGGTGTCATGCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSSKRS*VSCCLW
Trigger: CCACAGGCAGCATGACACCCAGGACCTCTTGGAAGA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAACGGGCTGCCCGAATTaGAAAACCAATGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRTGCPN*KTNAMC
Trigger: GCACATGGCATTGGTTTTTCAATTCGGGCAGCCCGT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGACTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATGCCAGAGAAGCCGGTaGACTCGGAGAAGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPCQRSR*TRRSGS
Trigger: ACTCCCGCTTCTCCGAGTTCACCGGCTTCTCTGGCA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGGTAGGAGCGGCTGCTaGAGGACATGCCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFGRSGC*RTCQRS
Trigger: GCTTCTCTGGCATGTCCTTCAGCAGCCGCTCCTACC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGAGGGCTCGTGCACTTaGACTCAAAGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPEGSCT*TQRRVG
Trigger: CCCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACCCAGATGTGTTATaGCCCGTGCCGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFHPDVL*PVPRDS
Trigger: GCTGTCACGCGGCACGGGTCATAACACATCTGGGTG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGTAACTTCTGCTGCCTaGGACAGTCACACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSVTSAA*DSHTCL
Trigger: CAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTAC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACCCATGCCTTCCCCATaGAGCTTATCTGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGPMPSP*SLSVCL
Trigger: CAGGCAGACAGATAAGCTTCATGGGGAAGGCATGGG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAAGTGTCTCCCTACTaGGTGTTCCCAGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADKVSPY*VFPGRQ
Trigger: TTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TQMCYDPCRVTARGVPATFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACCATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSASSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSASASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCGGAGAAGCGGGAGTaGGTGCCCAGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSEKRE*VPRDMM
Trigger: CATCATGTCCCTGGGCACGCACTCCCGCTTCTCCGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTTCCCAGGATGGTaGGCTGAGGTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFHFPGW*AEVSGC
Trigger: GCACCCAGAGACCTCAGCGCACCATCCTGGGAAGTG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAAGTTGGTCTGAGACATaGACTTCCCAGGATGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRSWSET*TSQDGA
Trigger: CGCACCATCCTGGGAAGTGCATGTCTCAGACCAACT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACACCATGGTGTACAGTaGAGCCCTCAAATTAGAATA +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQHHGVQ*SPQIRI
Trigger: TATTCTAATTTGAGGGCTGCACTGTACACCATGGTG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCGGGTAACTTCTGCTaGCTGAGACAGTCACACGTG +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQSGNFC*LRQSHV
Trigger: CACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGGCTCGGGTAACTTCTaGTGCCTGAGACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDGSGNF*CLRQSH
Trigger: GTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTGGCTCGGGTAACTTCTaGTGCCTGAGACAGTCACAC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAGSGNF*CLRQSH
Trigger: GTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCC...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCCAAAGTGTCGTCGTaGAGAGCTGTGGCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFAKVSS*RAVASS
Trigger: GCTGGACGCCACAGCTCTGCACGACGACACTTTGGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCAATGTTGGCATCTaGAGAAATGAGAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVNVGI*RNERCM
Trigger: CATACACCTCTCATTTCTCCAGATGCCAACATTGAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCTTCAACAACGACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SSTTTGRCERPILNPALSFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...AGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGATCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACTGGTGAGTGATGTCTaGAGACTCGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRLVSDV*RLGLFQ
Trigger: TTGGAAGAGGCCGAGTCTCCAGACATCACTCACCAG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACCTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNAVSRS*EPGVPG
Trigger: GCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGC...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGCCAGTGGTGAAGTGTaGCGGAACCTTCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPASGEV*RNLPAA
Trigger: AGCCGCTGGAAGGTTCCGCCACACTTCACCACTGGC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGCTCAGTCTCCGTaGAGTGCATGGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFQAQSP*SAWCGH
Trigger: GTGGCCACACCATGCACTCCACGGAGACTGAGCCTG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCCAGGGATGTGCTCATaGTGGTCGTGGACTCACGGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFPGMCS*WSWTHG
Trigger: CCCGTGAGTCCACGACCACCATGAGCACATCCCTGG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACAGGATGGAGCTGGCTaGCTTGGAAGCCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRQDGAG*LGSQEI
Trigger: AATTTCCTGGCTTCCAAGCCAGCCAGCTCCATCCTG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGACGGACACGTCGGTCTaGCTCTCGCTGCTGCGGACG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTTDTSV*LSLLRT
Trigger: CGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGTCAAGGTGGGGACATaGGCTCGCCCTGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFVKVGT*ARPEFT
Trigger: GGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGAC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGAGCCACGGAATTCACTaGTTTCCTATCCATGGGATA +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSSHGIH*FPIHGI
Trigger: TATCCCATGGATAGGAAACCAGTGAATTCCGTGGCT...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCATGCTGCCTGTGGGTTaGCTTCCTCTCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSMLPVG*LPLFIL
Trigger: CAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCAT...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTTACAGGACTTATCGTaGTGCCCTCACCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHLQDLS*CPHQTP
Trigger: AGGGGTCTGGTGAGGGCACCACGATAAGTCCTGTAA...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGCATGCACCTCCAAGATaGGCAGGGGAGCTACACCCA +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQHAPPR*AGELHP
Trigger: TGGGTGTAGCTCCCCTGCCCATCTTGGAGGTGCATG...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACTTGGGGACAGTGGGTaGAGTCAGCCAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLGDSG*SQPELF
Trigger: AAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTTGGGGACAGTGGGTaGAGTCAGCCAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSALGDSG*SQPELF
Trigger: AAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGCCCGCCTTCCGCAGGTaGATCAGGGACCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRPAFRR*IRDQRE
Trigger: CTCCCTTTGGTCCCTGATCCACCTGCGGAAGGCGGG...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGCAGAGGCTGAGCCCTaGCGGGCTGCCCGAATTGAA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTAEAEP*RAARIE
Trigger: TTCAATTCGGGCAGCCCGTCAGGGCTCAGCCTCTGC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCCTCTTCAACGGGGTTaGGCAAACGGACTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGPLQRG*ANGLGL
Trigger: GAGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGCGATAGCAGGTGTGTaGTCTCCTCTTGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRAIAGV*SPLAGG
Trigger: CCCGCCAGCAAGAGGAGATCACACACCTGCTATCGC...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGAGGTCTCTGGGTGCTaGACTGGAGTGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFEVSGC*TGVEVA
Trigger: AGCTACCTCCACTCCAGTTCAGCACCCAGAGACCTC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCCCTTGTTGCATTCATaGTTCTTTTCACAAGCACCT +
Preference number: 4 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSPLLHS*FFSQAP
Trigger: AGGTGCTTGTGAAAAGAATCATGAATGCAACAAGGG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTCGCAGGGACATTGCTaGAGTCACCCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDSQGHC*SHPKAK
Trigger: TTTGGCTTTGGGGTGACTTCAGCAATGTCCCTGCGA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR TCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAGTAACTTCTGCTGCCTaGGACAGTCACACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGVTSAA*DSHTCL
Trigger: CAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTAC...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTGCCTGGAACAGAGGTaGGAATGGCCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDCLEQR*EWPKTL
Trigger: CAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCCATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QIVDSRSRAQNILHLPKAHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...GGCTTTTGGCAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGATCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCAAGTGGCTGGTGCTaGCACAAGCTGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSSGWC*HKLELG
Trigger: CCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACGGTCTGGCTCTCGCTaGTGCGGACGTTCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRSGSR*CGRSFL
Trigger: GAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCAGAGGAGGGGTCCCTaGTCCTCAGTCAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTQRRGP*SSVKVG
Trigger: CCCCACCTTGACTGAGGAGCAGGGACCCCTCCTCTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCCATGGTGGGGAAGCTaGGATTCCGCCGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTPWWGS*DSAGCH
Trigger: GTGGCATCCGGCGGAATCGCAGCTTCCCCACCATGG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAACAGGAGCTTTCATCTaGATGCTAGATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVTGAFI*MLDPTM
Trigger: CATGGTGGGATCTAGCATGCAGATGAAAGCTCCTGT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCACCATGGTGTACAGTaGAGCCCTCAAATTAGAATA +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVHHGVQ*SPQIRI
Trigger: TATTCTAATTTGAGGGCTGCACTGTACACCATGGTG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTATCCTGGGTGTCATGCTaGCTGTGGGTTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLSWVSC*LWVGFL
Trigger: GAGGAAGCCAACCCACAGGCAGCATGACACCCAGGA...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCCTGGGTGTCATGCTaGCTGTGGGTTGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSWVSC*LWVGFL
Trigger: GAGGAAGCCAACCCACAGGCAGCATGACACCCAGGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGGTCCTGGGTGTCATaGTGCCTGTGGGTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRSWVS*CLWVGF
Trigger: GAAGCCAACCCACAGGCAGCATGACACCCAGGACCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACAGGACTTATCGTGGTaGCCTCACCAGACCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLQDLSW*PHQTPP
Trigger: AGGAGGGGTCTGGTGAGGGCACCACGATAAGTCCTG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTAATGGCCCAAAACTCTaGCTCCGGGAAAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSANGPKL*LRERCQ
Trigger: TTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAACCTCAGCTCTTTCCTaGCCTGTATTTCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTTSALS*PVFQGE
Trigger: CTCCCCTTGAAATACAGGGCAGGAAAGAGCTGAGGT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTGTGTCTCCATGATTaGAGGCATAGAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLCLHD*RHRATW
Trigger: CCAAGTAGCTCTATGCCTGCAATCATGGAGACACAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGTGCATTGTCACACCTaGCAGCCAGAGGGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRVHCHT*QPEGRD
Trigger: GTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCAC...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCTAGGACTGCATGGTTaGATGCCTCCGAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLGLHG*MPPKGA
Trigger: TGCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGTCAATGTTGGCATCTaGAGAAATGAGAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVVNVGI*RNERCM
Trigger: CATACACCTCTCATTTCTCCAGATGCCAACATTGAC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGTCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGCTGTGAGCTGCCGCTaGGCATCCTTAGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHAVSCR*ASLAAP
Trigger: GGGGGCTGCTAAGGATGCCCAGCGGCAGCTCACAGC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGCTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFFMAED*LEPGMF
Trigger: GAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGTGGAGTGCATGGTGTaGCCACCGGCGTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPVECMV*PPAWIS
Trigger: TGAAATCCACGCCGGTGGCCACACCATGCACTCCAC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCTCCGTGGAGTGCATaGTGTGGCCACCGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSPWSA*CGHRRG
Trigger: TCCACGCCGGTGGCCACACCATGCACTCCACGGAGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGGGATGTGCTCATGGTaGTCGTGGACTCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFGMCSW*SWTHGC
Trigger: ACACCCGTGAGTCCACGACCACCATGAGCACATCCC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCATGGTGACAGCACCCTaGCCAGCCTCGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFMVTAP*PASGFR
Trigger: TCTGAAACCCGAGGCTGGCCAGGGTGCTGTCACCAT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAATGGTGACAGCACCCTaGCCAGCCTCGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPMVTAP*PASGFR
Trigger: TCTGAAACCCGAGGCTGGCCAGGGTGCTGTCACCAT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTCACATGGTTGGACTaGAATGCCACAGACACACTA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVTWLD*NATDTL
Trigger: TAGTGTGTCTGTGGCATTCCAGTCCAACCATGTGAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACCTTCCATAAATGTCTaGAACACGGTGTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVPSINV*NTVSQD
Trigger: GTCCTGTGACACCGTGTTCCAGACATTTATGGAAGG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTGGCTCAGCTGAAGTaGAGGGGTGTACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSALAQLK*RGVHKA
Trigger: AGCTTTGTGTACACCCCTCCACTTCAGCTGAGCCAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATTCCTCTCTTCATCCTaGCAGTCGTATTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQFLSSS*QSYSKH
Trigger: ATGTTTTGAATACGACTGCCAGGATGAAGAGAGGAA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGATTACAGGACTTATCGTaGTGCCCTCACCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLQDLS*CPHQTP
Trigger: AGGGGTCTGGTGAGGGCACCACGATAAGTCCTGTAA...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATACTACGGATGGTGCCTaGAACAGAGGTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDTTDGA*NRGENG
Trigger: GCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCATGCACCTCCAAGATaGGCAGGGGAGCTACACCCA +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFHAPPR*AGELHP
Trigger: TGGGTGTAGCTCCCCTGCCCATCTTGGAGGTGCATG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAGGGACCAGACCACCATaGATACAAATCCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQGTRPP*IQIPRQ
Trigger: CTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCC...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTGGGACAGCAGGCTCTaGACAAAAGTGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHWDSRL*TKVPSI
Trigger: TATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCA...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGACCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGAGACACCTCCTCCCTaGTGTGTTCCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGETPPP*CVPPAP
Trigger: AGGAGCAGGTGGAACACATCAGGGAGGAGGTGTCTC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATCCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSALGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGGGGAAACAGGCCCAGTaGGTGGTAGCGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQGKQAQ*VVAPRR
Trigger: ACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCC...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGAGGTCTCTGGGTGCTaGACTGGAGTGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGEVSGC*TGVEVA
Trigger: AGCTACCTCCACTCCAGTTCAGCACCCAGAGACCTC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGCTGGAGTTGGGGCTaGGTTAAGGCTTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSWSWG*VKAWCD
Trigger: GTCACACCAAGCCTTAACTCAGCCCCAACTCCAGCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGAGGGCTCGTGCACTTaGACTCAAAGGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTEGSCT*TQRRVG
Trigger: CCCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGACATGGGCTCGCCCTaGGTTCACCACTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTDMGSP*VHHFGH
Trigger: GTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCACCCAGATGTGTTATaGCCCGTGCCGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTHPDVL*PVPRDS
Trigger: GCTGTCACGCGGCACGGGTCATAACACATCTGGGTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCAGCTGCACGTGGCTaGGGATGGAGGCTCCTTACG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSAARG*GWRLLT
Trigger: CGTAAGGAGCCTCCATCCTCAGCCACGTGCAGCTGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCTTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: LFGELSTHQDARGESHRSLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTTTGGGACCTCTCACCTaGGGTCTCTGGGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGLGPLT*GLWVLN
Trigger: GTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCAA...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACTACACACCTCCAACCTaGCCCTTTCTACAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADYTPPT*PFLQFQ
Trigger: TTGAAACTGTAGAAAGGGTCAGGTTGGAGGTGTGTA...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPCVISS*WRAASS
Trigger: GGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGAGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCACTTCCCAGGATGGTaGGCTGAGGTCTCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTHFPGW*AEVSGC
Trigger: GCACCCAGAGACCTCAGCGCACCATCCTGGGAAGTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATGCCTCCGGGAAAGGTaGCAAGTTTACAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQCLRER*QVYRTY
Trigger: ATAAGTCCTGTAAACTTGGCACCTTTCCCGGAGGCA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTGCCTCCGGGAAAGGTaGCAAGTTTACAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHCLRER*QVYRTY
Trigger: ATAAGTCCTGTAAACTTGGCACCTTTCCCGGAGGCA...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGAATGGCCCAAAACTCTaGCTCCGGGAAAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQNGPKL*LRERCQ
Trigger: TTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTACTCCACAAAAGCTTTaGCTTCCCAACACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATTPQKL*LPNTRG
Trigger: GCCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGT...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTACGTCAAGTAAAACGCTaGCATGCCTCCCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLRQVKR*HASPPF
Trigger: GAAGGGCGGGGAGGCATGGCAGCGTTTTACTTGACG...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFGVDFK*LVLPQA
Trigger: AGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGVDFK*LVLPQA
Trigger: AGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGTGTGGCCACCGGCGTaGATTTCAAGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTVWPPA*ISSGWC
Trigger: GCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCCAGGGATGTGCTCATaGTGGTCGTGGACTCACGGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTPGMCS*WSWTHG
Trigger: CCCGTGAGTCCACGACCACCATGAGCACATCCCTGG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGATCACAGCCATCTTaGGCGTGTAGGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGSQPS*ACRSAG
Trigger: TCCTGCACTCCTACACGCCCAAGATGGCTGTGATCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTTTGGTATTATGCCTaGTTGTGGTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVWYYA*LWFFPS
Trigger: AGAGGGGAAGAACCACAACCAGGCATAATACCAAAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATTTCAGAAAAAGCGCTaGAGCCAGCGGAATACCAAA +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVFQKKR*SQRNTK
Trigger: TTTGGTATTCCGCTGGCTCCAGCGCTTTTTCTGAAA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTCACATGGTTGGACTaGAATGCCACAGACACACTA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVTWLD*NATDTL
Trigger: TAGTGTGTCTGTGGCATTCCAGTCCAACCATGTGAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACACACCTTTAATGCTTaGGGACAGTGGGTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGHTFNA*GQWVES
Trigger: TGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTGGGACAGCAGGCTCTaGACAAAAGTGCCTAGCATA +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDWDSRL*TKVPSI
Trigger: TATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAAACTTTTTCTCCATaGGACAGCAGGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADKTFSP*DSRLWT
Trigger: TGTCCAGAGCCTGCTGTCCCATGGAGAAAAAGTTTT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCACAGCCACCCCTTCCTaGACTCCAAATTGTAGACTC +
Preference number: 4 (lower is better)
Translates to: QIVDSRSRAQNILHLPKATATPS*TPNCRL
Trigger: GAGTCTACAATTTGGAGTCCAGGAAGGGGTGGCTGT...GGCTTTTGGCAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTGTGGCGTCCAGCTTaGCAGGTTTCACGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLWRPA*QVSRGG
Trigger: ACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTAGCTCATGCCGGAGCTaGGACACCTCCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNISSCRS*DTSSLM
Trigger: CATCAGGGAGGAGGTGTCTCAGCTCCGGCATGAGCT...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCAAGATGCCCGAGGTaGGAGTCACAGGAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSRCPR*ESQELS
Trigger: TGAAAGCTCCTGTGACTCTCACCTCGGGCATCTTGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGATGCCCTGGCTCAGCTaGAGTGGAGGGGTGTACACA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTMPWLS*SGGVYT
Trigger: TGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCAT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTTCCGGAAGATCGGTaGTGTTGCACACATCACAGG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLPEDR*CCTHHR
Trigger: CCTGTGATGTGTGCAACAGCACCGATCTTCCGGAAG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAACGTCTCTTCAATTTaGTCGGTTGTGAGGTCAATG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVNVSSI*SVVRSM
Trigger: CATTGACCTCACAACCGAGCAAATTGAAGAGACGTT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTACTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLLMCST*SSSSSF
Trigger: GAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAG...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCTTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCGTTCCCTCAATCTCTaGTGCCAAGGAATCCATGGG +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFRSLNL*CQGIHG
Trigger: CCCATGGATTCCTTGGCAGCAGAGATTGAGGGAACG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTTCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTCGTTGCCTATGTCGCTaGCGTAGAAGCTGGACCGGG +
Preference number: 4 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNIRCLCR*RRSWTG
Trigger: CCCGGTCCAGCTTCTACGGCAGCGACATAGGCAACG...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGCTCATCTGAAGGATaGAGGATGCGACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSSSEG*RMRQVV
Trigger: CACCACCTGTCGCATCCTGCATCCTTCAGATGAGCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCAAGTGGCTGGTGCTaGCACAAGCTGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSSGWC*HKLELG
Trigger: CCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGAGGATGTGGGTGTCTaGATAGGCGAGTTCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTEDVGV*IGEFGG
Trigger: TCCGCCGAACTCGCCTATGCAGACACCCACATCCTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGACACATCTTCTGCTaGCGGGGAGGACACAGCATG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGHIFC*RGGHSM
Trigger: CATGCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGAAGGACACATCTTCTaGTGCCGGGGAGGACACAGC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTEGHIF*CRGGHS
Trigger: GCTGTGTCCTCCCCGGCAGCAGAAGATGTGTCCTTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACTGTGTCTCCATGATTaGAGGCATAGAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGLCLHD*RHRATW
Trigger: CCAAGTAGCTCTATGCCTGCAATCATGGAGACACAG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGGCTCTGGACAAAAGTaGCTAGCATACAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSGSGQK*LAYKFS
Trigger: GGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CTCCTCAAGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCTGCGTCAAGTAAAACGCTaGCATGCCTCCCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLKKPSDSIYVIICLSHLRQVKR*HASPPF
Trigger: GAAGGGCGGGGAGGCATGGCAGCGTTTTACTTGACG...CAGATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCTTCTTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGACTAGAAGACCACAGTaGACATGCTTGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLTRRPQ*TCLSFL
Trigger: GAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGT...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTCAATGTTGGCATCTaGAGAAATGAGAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVNVGI*RNERCM
Trigger: CATACACCTCTCATTTCTCCAGATGCCAACATTGAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLSPPQR*CRTEAA
Trigger: AGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGA...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGTCTCTGTCTTCAGCTaGCTGGCCTCGGATCGAAGT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGVSVFS*LASDRS
Trigger: ACTTCGATCCGAGGCCAGCCAGCTGAAGACAGAGAC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTC +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSVISSC*RAASSV
Trigger: GACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCAC...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTGCCAAGGAATCCATaGGAAACAGGCCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLPRNP*ETGPVS
Trigger: ACTCACTGGGCCTGTTTCCCATGGATTCCTTGGCAG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACTGGTGAGTGATGTCTaGAGACTCGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLLVSDV*RLGLFQ
Trigger: TTGGAAGAGGCCGAGTCTCCAGACATCACTCACCAG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTAAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATTGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGG +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHWPRTG*SRGCSW
Trigger: CCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCA...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGACAGGAGGGAGTTCATaGCCGAGGACTGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTTGGSS*PRTGWS
Trigger: GCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATGGATTTCAAGTGGCTaGTGCTGCCACAAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPWISSG*CCHKLE
Trigger: CTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGGATGTGCTCATGGTaGTCGTGGACTCACGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGMCSW*SWTHGC
Trigger: ACACCCGTGAGTCCACGACCACCATGAGCACATCCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTTTGGTATTATGCCTaGTTGTGGTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVWYYA*LWFFPS
Trigger: AGAGGGGAAGAACCACAACCAGGCATAATACCAAAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATTTCAGAAAAAGCGCTaGAGCCAGCGGAATACCAAA +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRFQKKR*SQRNTK
Trigger: TTTGGTATTCCGCTGGCTCCAGCGCTTTTTCTGAAA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGATGGTGACAGCACCCTaGCCAGCCTCGGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTMVTAP*PASGFR
Trigger: TCTGAAACCCGAGGCTGGCCAGGGTGCTGTCACCAT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAATCAGAATACCAGTGTaGTTTCCATCATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: GALPVGSEERAGRTQGLQIRIPV*FPSFEL
Trigger: AAGTTCAAATGATGGAAACCACACTGGTATTCTGAT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACTAGGGTCTTCTCTCTaGAAAAGCTTAGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTLGSSL*KSLVTF
Trigger: GAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACATCCCAGTGGCAACTaGAATGTGGGTAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTHPSGN*NVGNSV
Trigger: TACAGAATTACCCACATTCCAGTTGCCACTGGGATG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCAGGCATAGAGCTACTTaGGACCTCCAGGATGATTTA +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSRHRAT*DLQDDL
Trigger: TAAATCATCCTGGAGGTCCCAAGTAGCTCTATGCCT...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAAAACTTTTTCTCCATaGGACAGCAGGCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTKTFSP*DSRLWT
Trigger: TGTCCAGAGCCTGCTGTCCCATGGAGAAAAAGTTTT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TTCTTCAACAACGACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCGCCCTTCCAGAATACTaGACAGAAGAATATCCCGAA +
Preference number: 4 (lower is better)
Translates to: FFNNDWPMRAANSKSRSFALPEY*TEEYPE
Trigger: TTCGGGATATTCTTCTGTCCAGTATTCTGGAAGGGC...GAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR CCA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGGCCCTTCCAGAATACTaGACAGAAGAATATCCCGAA +
Preference number: 4 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLALPEY*TEEYPE
Trigger: TTCGGGATATTCTTCTGTCCAGTATTCTGGAAGGGC...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGGACCCTGAAAAAGGGTaGCTTACGGAGGTACAAAAC +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRDPEKG*LTEVQN
Trigger: GTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTC...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAAACCCAGTCATGTCTTaGGTCTTTAACAAGCACAAC +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARNPVMS*VFNKHN
Trigger: GTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTT...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCAGGCTAGGACTGCATaGTTGCATGCCTCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTQARTA*LHASEG
Trigger: CCCTTCGGAGGCATGCAACCATGCAGTCCTAGCCTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
3UTR CAA 72 bp TGTTTCCCCCTGGAACCGGTTTGGTATTATGCCTGGTaGTGGTTCTTCCCCTCTACATTTGGTGTTGACACA +
Preference number: 4 (lower is better)
Translates to: CFPLEPVWYYAW*WFFPSTFGVDT
Trigger: TGTGTCAACACCAAATGTAGAGGGGAAGAACCACAACCAGGCATAATACCAAACCGGTTCCAGGGGGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR CAA 72 bp GCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTaGTCTTTCCTCGGCGAGTTTCATGGCCTATGTGTG +
Preference number: 4 (lower is better)
Translates to: AKERTRRPQCTC*SFLGEFHGLCV
Trigger: CACACATAGGCCATGAAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLGQFL*DTSNLD
Trigger: GTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAGCTGGAGTTGGGGCTaGGTTAAGGCTTGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSWSWG*VKAWCD
Trigger: GTCACACCAAGCCTTAACTCAGCCCCAACTCCAGCT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGAAACGACTGTCCACTaGGGCAGAGCAGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTETTVH*GRAVKV
Trigger: GACCTTCACTGCTCTGCCTCAGTGGACAGTCGTTTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCCACAGACACACTATaGCTGAAACTGGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFATDTL*LKLEGT
Trigger: CGTTCCTTCCAGTTTCAGTCATAGTGTGTCTGTGGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTTGCCTGGAACAGAGGTaGGAATGGCCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGCLEQR*EWPKTL
Trigger: CAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCA...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACACTTTAAAGATCCCTaGTGGGCCATGCACCTCCAA +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLHFKDP*WAMHLQ
Trigger: TTGGAGGTGCATGGCCCATCAGGGATCTTTAAAGTG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAAAAGTGTCTCCCTACTaGGTGTTCCCAGGCAGACAA +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLKVSPY*VFPGRQ
Trigger: TTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTT...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAAAAACCAATGCCATGTaGAGACATAAACTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVKTNAM*RHKLQR
Trigger: CCTTTGGAGTTTATGTCTGCACATGGCATTGGTTTT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCATCTCCATGCACTCTaGGTACTTGTCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGHLHAL*VLVLQL
Trigger: GAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTTCCTCCTGCGCCTCATaGAGCATCTCCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSSSCAS*SISMHS
Trigger: AGAGTGCATGGAGATGCTGCATGAGGCGCAGGAGGA...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATTTCTGCACCACCACCTaGCTTCCTGACGGACACTGG +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHFCTTT*LPDGHW
Trigger: CCAGTGTCCGTCAGGAAGGCAGGTGGTGGTGCAGAA...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCAACAACGACTGGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTTATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: STTTGRCERPILNPALSPYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...AGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGATCACAGCCATCTTaGGCGTGTAGGAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGSQPS*ACRSAG
Trigger: TCCTGCACTCCTACACGCCCAAGATGGCTGTGATCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCAAGAGAGGAGAACGTaGGTCTCCTCTAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTQERRT*VSSRAT
Trigger: GGTTGCCCTAGAGGAGACCCACGTTCTCCTCTCTTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTACTACGGATGGTGCCTaGAACAGAGGTGAGAATGGC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGTTDGA*NRGENG
Trigger: GCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGT...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCTGCTCAGCTCCACTTaGAAATCACCAGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGLLSST*KSPGDL
Trigger: CAAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCATCCCAGTGGCAACTaGAATGTGGGTAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAHPSGN*NVGNSV
Trigger: TACAGAATTACCCACATTCCAGTTGCCACTGGGATG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGCCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTAAGACACGCTTCTGGTaGGTGATGTCTGGAGACTCG +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSKTRFW*VMSGDS
Trigger: CGAGTCTCCAGACATCACTCACCAGAAGCGTGTCTT...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCGCAGGGACATTGCTaGAGTCACCCCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSQGHC*SHPKAK
Trigger: TTTGGCTTTGGGGTGACTTCAGCAATGTCCCTGCGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR TCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACGTACAGGTAACAGATaGTCTCATTTACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTRTGNR*SHLPSE
Trigger: TTCAGAAGGTAAATGAGATCATCTGTTACCTGTACG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACGTACAGGTAACAGATaGTCTCATTTACCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HTFNAWGQWVESARALFQRTGNR*SHLPSE
Trigger: TTCAGAAGGTAAATGAGATCATCTGTTACCTGTACG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTAATTTGCCACAGGTTTaGGTACAGAGAGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATNLPQV*VQREQA
Trigger: TGCTTGTTCTCTCTGTACTCAAACCTGTGGCAAATT...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATATAACGTTGCTAGGATaGATTTGCCACAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDITLLG*ICHRFE
Trigger: CTCAAACCTGTGGCAAATTCATCCTAGCAACGTTAT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGTACACACCTCCAACCTaGCCCTTTCTACAGTTTCAA +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQYTPPT*PFLQFQ
Trigger: TTGAAACTGTAGAAAGGGTCAGGTTGGAGGTGTGTA...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGACACAACCTTGCTATATaGAGTTCAAATCAGAACACA +
Preference number: 4 (lower is better)
Translates to: FPRRVSWPMCALSHLPARHNLAI*SSNQNT
Trigger: TGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTG...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRGVRDL*LTTWLM
Trigger: CATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCC...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATTGTCGAGGACGACGTTaGCTATGTCGCTGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHCRGRR*LCRCRR
Trigger: TCTACGGCAGCGACATAGGCAACGTCGTCCTCGACA...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAGTTGGTCTGAGACATaGACTTCCCAGGATGGTGCG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSWSET*TSQDGA
Trigger: CGCACCATCCTGGGAAGTGCATGTCTCAGACCAACT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACAGGAGCTTTCATCTaGATGCTAGATCCCACCATG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTGAFI*MLDPTM
Trigger: CATGGTGGGATCTAGCATGCAGATGAAAGCTCCTGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACCGGTTTGGTATTATaGCTGGTTGTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTGLVL*LVVVLP
Trigger: GGGAAGAACCACAACCAGGCATAATACCAAACCGGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCACCGGTTTGGTATTATaGCTGGTTGTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFTGLVL*LVVVLP
Trigger: GGGAAGAACCACAACCAGGCATAATACCAAACCGGT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGGAAAGGAAGGCAATTTaGAGAGAGCTAACGGAGACC +
Preference number: 4 (lower is better)
Translates to: THELTLKKGGLRRYKTHLERKAI*RELTET
Trigger: GGTCTCCGTTAGCTCTCTGCAAATTGCCTTCCTTTC...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAGAAAGGAAGGCAATTTaGAGAGAGCTAACGGAGACC +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLERKAI*RELTET
Trigger: GGTCTCCGTTAGCTCTCTGCAAATTGCCTTCCTTTC...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTAGACCACAGTGCACATaGTTGTCTTTCCTCGGCGAG +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSRPQCT*LSFLGE
Trigger: CTCGCCGAGGAAAGACAAGCATGTGCACTGTGGTCT...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTAETWY*AWFCSG
Trigger: TCCGGAACAAAACCATGCCCAATACCACGTCTCGGC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTGGTGAGTGATGTCTaGAGACTCGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLVSDV*RLGLFQ
Trigger: TTGGAAGAGGCCGAGTCTCCAGACATCACTCACCAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSALCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTCTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATAGCCGGGGATGTTCATaGGAGAAGGGGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHSRGCS*EKGSEI
Trigger: GATCTCTGACCCCTTCTCCCATGAACATCCCCGGCT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACGTGGGAGAGAAATGTaGTCACCTGTGTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLRGREM*SPVSSS
Trigger: AGAAGATGACACAGGTGACCACATTTCTCTCCCACG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCAGGATGGAGCTGGCTaGCTTGGAAGCCAGGAAATT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTQDGAG*LGSQEI
Trigger: AATTTCCTGGCTTCCAAGCCAGCCAGCTCCATCCTG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTGGCTCAGCTGAAGTaGAGGGGTGTACACAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLAQLK*RGVHKA
Trigger: AGCTTTGTGTACACCCCTCCACTTCAGCTGAGCCAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACATCCTGAGCCTTTCCTaGTTCTATTTTAATACAGCG +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHILSLS*FYFNTA
Trigger: CGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGAT...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGCTAGGGTCTTCTCTCTaGAAAAGCTTAGTGACGTTC +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQLGSSL*KSLVTF
Trigger: GAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATCAAGGGGAGTGTTGTaGCCTTCACAAATGAAAATT +
Preference number: 4 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTSRGVL*PSQMKI
Trigger: AATTTTCATTTGTGAAGGCCACAACACTCCCCTTGA...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGGGACCAGACCACCATaGATACAAATCCCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGGTRPP*IQIPRQ
Trigger: CTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCCCTTCCAGAATACTaGACAGAAGAATATCCCGAA +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQALPEY*TEEYPE
Trigger: TTCGGGATATTCTTCTGTCCAGTATTCTGGAAGGGC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGCCACAGACACACTATaGCTGAAACTGGAAGGAACG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTATDTL*LKLEGT
Trigger: CGTTCCTTCCAGTTTCAGTCATAGTGTGTCTGTGGC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR TCA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGCCTGATACTAACACATaGACTGACCCTGAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: THELTLKKGGLRRYKTHLPDTNT*TDPEKG
Trigger: CCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGG...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGATTTCAAGTGGCTGGTaGTGCCACAAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTISSGW*CHKLEL
Trigger: CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAAT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTATTTAGCAGCCTTTCCTaGTCCCACTTTAAAGATCCC +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLFSSLS*SHFKDP
Trigger: GGGATCTTTAAAGTGGGAGCAGGAAAGGCTGCTAAA...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAACTATAAATGTTCATaGCCCTCGTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADNYKCS*PSSNNV
Trigger: AACGTTATTTGACGAGGGGCATGAACATTTATAGTT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp CAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCAAAGCATTAATTTTCTaGATTCCTCACACCCACAGG +
Preference number: 4 (lower is better)
Translates to: QIVDSRSRAQNILHLPKAKALIF*IPHTHR
Trigger: CCTGTGGGTGTGAGGAATGCAGAAAATTAATGCTTT...GGCTTTTGGCAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAAT +
Preference number: 4 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQFFNND*PMRAAN
Trigger: ATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAA...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTAAPRC*TSSSFS
Trigger: GGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRTWYWA*FCSGGS
Trigger: AGAACCTCCGGAACAAAACCATGCCCAATACCACGT...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNIGSAET*YWAWFC
Trigger: ACAAAACCATGCCCAATACCACGTCTCGGCGCTACC...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTTCCTCTCTTCATCCTaGCAGTCGTATTCAAAACAT +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAFLSSS*QSYSKH
Trigger: ATGTTTTGAATACGACTGCCAGGATGAAGAGAGGAA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGTGTCATGCTGCCTGTaGGTTGGCTTCCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHVSCCL*VGFLSS
Trigger: TGAAGAGAGGAAGCCAACCCACAGGCAGCATGACAC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCTGCTCAGCTCCACTTaGAAATCACCAGGGGACTTG +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHLLSST*KSPGDL
Trigger: CAAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTATCCTGAGCCTTTCCTaGTTCTATTTTAATACAGCG +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAILSLS*FYFNTA
Trigger: CGCTGTATTAAAATAGAACCAGGAAAGGCTCAGGAT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTCCGAAGGTTTATTTaGTTAAGGAGTATTGCTAAA +
Preference number: 4 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLRRFI*LRSIAK
Trigger: TTTAGCAATACTCCTTAACCAAATAAACCTTCGGAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CCA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTTTCTTAACGACAGTCTaGAGCCAAAACAGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: KCLPTECSQADNSSWDSAFLTTV*SQNSKV
Trigger: CACTTTACTGTTTTGGCTCCAGACTGTCGTTAAGAA...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR TCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCCTTCTCCTCATAGGTaGTGGTCTCTGTCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHPSPHR*WSLSSA
Trigger: AGCTGAAGACAGAGACCATCACCTATGAGGAGAAGG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACCCTTGTTGCATTCATaGTTCTTTTCACAAGCACCT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPPLLHS*FFSQAP
Trigger: AGGTGCTTGTGAAAAGAATCATGAATGCAACAAGGG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCCCTTGTTGCATTCATaGTTCTTTTCACAAGCACCT +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFPLLHS*FFSQAP
Trigger: AGGTGCTTGTGAAAAGAATCATGAATGCAACAAGGG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQKCLKS*AFPGSI
Trigger: AATAGAACCAGGAAAGGCTCAGGATTTCAGACATTT...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACCAAGTAAAATCCCTTaGCCACAGCTGTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLPSKIP*PQLSEI
Trigger: AATTTCAGACAGCTGTGGTCAAGGGATTTTACTTGG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAATAACGTTGCTAGGATaGATTTGCCACAGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLITLLG*ICHRFE
Trigger: CTCAAACCTGTGGCAAATTCATCCTAGCAACGTTAT...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TTCTCCTCAAGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: FSSRSRVTASMSLYVLVITTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...GATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCTTCTTGAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DPMIPRALSTKLFIPVATFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGTTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRLAAPR*WTSSSF
Trigger: AAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAA...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCCCTCAATCTCTGCTaGCAAGGAATCCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSLNLC*QGIHGK
Trigger: TTTCCCATGGATTCCTTGGCAGCAGAGATTGAGGGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTTCGGCCTCTTCCAACTaGAGCTCCTTGCGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVSASSN*SSLRIV
Trigger: AACGATGCGCAAGGAGCTGCAGTTGGAAGAGGCCGA...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACACCATGGTGTACAGTaGAGCCCTCAAATTAGAATA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPHHGVQ*SPQIRI
Trigger: TATTCTAATTTGAGGGCTGCACTGTACACCATGGTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR GCA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTTTTAGCAGCCTTTCCTaGTCCCACTTTAAAGATCCC +
Preference number: 4 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGFSSLS*SHFKDP
Trigger: GGGATCTTTAAAGTGGGAGCAGGAAAGGCTGCTAAA...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATACTCCACAAAAGCTTTaGCTTCCCAACACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHTPQKL*LPNTRG
Trigger: GCCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACAACTATAAATGTTCATaGCCCTCGTCAAATAACGTT +
Preference number: 4 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHNYKCS*PSSNNV
Trigger: AACGTTATTTGACGAGGGGCATGAACATTTATAGTT...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGCTTCGATAAATTTCTaGATAGTCAGTAGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SPKCLPTECSQADNSSWDASINF*IVSSLA
Trigger: TGCAAGACTACTGACTATGCAGAAATTTATCGAAGC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGTCATAACCGTAGATaGTGTCGGCTCTTAACTTAT +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGHNRR*CRLLTY
Trigger: ATAAGTTAAGAGCCGACACCATCTACGGTTATGACC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCAATAAGTCACATGGTTaGACTGGAATGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFNKSHG*TGMPQT
Trigger: TGTCTGTGGCATTCCAGTCCAACCATGTGACTTATT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAATAAGTCACATGGTTaGACTGGAATGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPNKSHG*TGMPQT
Trigger: TGTCTGTGGCATTCCAGTCCAACCATGTGACTTATT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAATCAGAATACCAGTGTaGTTTCCATCATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRIRIPV*FPSFEL
Trigger: AAGTTCAAATGATGGAAACCACACTGGTATTCTGAT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGCCTCGGCGAGTTTCATaGCCTATGTGTGCATTGTCA +
Preference number: 4 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQPRRVS*PMCALS
Trigger: TGACAATGCACACATAGGCCATGAAACTCGCCGAGG...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATTAATAGAGTTTGCTTaGAACCTCTCCCCGACACCA +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLLIEFA*NLSPTP
Trigger: TGGTGTCGGGGAGAGGTTCCAAGCAAACTCTATTAA...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGACAGAAGTTCTGATTTaGCTTTGCATCGTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: MPLILTHELTLKKGGLRRTEVLI*LCIVSV
Trigger: TACACTTACGATGCAAAGCCAAATCAGAACTTCTGT...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp AGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCTGGCCAACTCTTCCTCAAGAAGCCGAGTaGCAGCATCTATGTCATTAT +
Preference number: 4 (lower is better)
Translates to: SRVTASMSLYVLVIWPTLPQEAE*QHLCHY
Trigger: ATAATGACATAGATGCTGTCACTCGGCTTCTTGAGG...AAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR TCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTTACAAAACACAGGATaGCTTCAAGGGGAAGGCATG +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLQNTG*LQGEGM
Trigger: CATGCCTTCCCCTTGAAGTCATCCTGTGTTTTGTAA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAATCTCATTTACCTTCTaGATGACCCAGCACTCAATT +
Preference number: 4 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLISFTF*MTQHSI
Trigger: AATTGAGTGCTGGGTCATTCAGAAGGTAAATGAGAT...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTATCTCATTTACCTTCTaGATGACCCAGCACTCAATT +
Preference number: 4 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFISFTF*MTQHSI
Trigger: AATTGAGTGCTGGGTCATTCAGAAGGTAAATGAGAT...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCACTTGGGAGTTTCAGTaGTTCTCAAAAGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFTWEFQ*FSKGKK
Trigger: CTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTCCATTTAATAGAGTTTaGTTGGAACCTCTCCCCGAC +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSPFNRV*LEPLPD
Trigger: GTCGGGGAGAGGTTCCAAGCAAACTCTATTAAATGG...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTGAGATACTAGCAATCTaGACATTGGCATCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNIEILAI*TLASLS
Trigger: GCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTC...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCTGGTGAGTGATGTCTaGAGACTCGGCCTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNLVSDV*RLGLFQ
Trigger: TTGGAAGAGGCCGAGTCTCCAGACATCACTCACCAG...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp AGACTGTGGAACCCAGTCATGTCTTGGGTCTTTAACAAGCACAACCTTACCTTACTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: RLWNPVMSWVFNKHNLTLLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...TAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACATGACTGGGTTCCACAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGTTTGGTATTATGCCTaGTTGTGGTTCTTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTVWYYA*LWFFPS
Trigger: AGAGGGGAAGAACCACAACCAGGCATAATACCAAAC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATTCACTTCTAACCTGGTaGATCCTCAGGAATGTCATG +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHSLLTW*ILRNVM
Trigger: CATGACATTCCTGAGGATTCACCAGGTTAGAAGTGA...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp GTGACAGCATCTATGTCATTATATGTCTTAGTCATCTGGCCAACTCTTTCAGCACAGCACATAAAACCTTaGACAGTTGAGCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VTASMSLYVLVIWPTLSAQHIKP*TVEPSP
Trigger: AGGAGATGGCTCAACTGTTCAAGGTTTTATGTGCTG...TGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTACAACGACTGGCCGATaGGAGCGGCCAATTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVTTTGR*ERPILN
Trigger: ATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGT...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTCATGCAGCATCTCCATaGACTCTGCGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVHAASP*TLRTCP
Trigger: AGGACAAGTACGCAGAGTGCATGGAGATGCTGCATG...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATGTTTCCCAGGTCGGCTaGCTCTGTTTCCAGAATGAT +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNVSQVG*LCFQND
Trigger: ATCATTCTGGAAACAGAGGCAGCCGACCTGGGAAAC...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGGCTCTGGACAAAAGTaGCTAGCATACAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHGSGQK*LAYKFS
Trigger: GGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAATCCCGCTCTTTCTCCTCAAGAAGCCGAGTGACAGCATCTATGTCATTATATACTCAACTGAGGAAGTaGATCCGAGCATTCTTCATA +
Preference number: 4 (lower is better)
Translates to: KSRSFSSRSRVTASMSLYTQLRK*IRAFFI
Trigger: TATGAAGAATGCTCGGATGCACTTCCTCAGTTGAGT...ATATAATGACATAGATGCTGTCACTCGGCTTCTTGAGGAGAAAGAGCGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGAGAACATACTGCATCTaGCAAAAGCCACAACCTTGC +
Preference number: 4 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQRTYCI*QKPQPC
Trigger: GCAAGGTTGTGGCTTTTGGCAGATGCAGTATGTTCT...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGTATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTCTGCTTGACAACCTaGTTGATGTTTCTTACTGTC +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLCLTT*LMFLTV
Trigger: GACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAATAAGTCACATGGTTaGACTGGAATGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTNKSHG*TGMPQT
Trigger: TGTCTGTGGCATTCCAGTCCAACCATGTGACTTATT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGTTCTTAACGACAGTCTaGAGCCAAAACAGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRFLTTV*SQNSKV
Trigger: CACTTTACTGTTTTGGCTCCAGACTGTCGTTAAGAA...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCCAAGTAAAATCCCTTaGCCACAGCTGTCTGAAATT +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHPSKIP*PQLSEI
Trigger: AATTTCAGACAGCTGTGGTCAAGGGATTTTACTTGG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTCACTGCGCAAGCTTTTaGCTTTTTCTGCAAATCAAC +
Preference number: 4 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNIHCASF*LFLQIN
Trigger: GTTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTG...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTATGTCTTAGTCATCTaGCCAACTCTTTCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTYVLVI*PTLSAH
Trigger: ATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR TCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATAAAGTAATTCTGGACTaGGGAGGACGACTCATTCCT +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNKVILD*GGRLIP
Trigger: AGGAATGAGTCGTCCTCCTCAGTCCAGAATTACTTT...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR TCA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATAAATGTCTGAAATCCTaGGCCTTTCCTGGTTCTATT +
Preference number: 4 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHKCLKS*AFPGSI
Trigger: AATAGAACCAGGAAAGGCTCAGGATTTCAGACATTT...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR TCA 90 bp CGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCTGGCCAACTCTTTCAAAAACCTTGAACAGTTaGGCCATCTCCTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: RVTASMSLYVLVIWPTLSKTLNS*AISSSI
Trigger: AATAGAAGAGGAGATGGCTCAACTGTTCAAGGTTTT...TGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCACTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR TCA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGAAGCTATACCTTTTCTaGACTCTAAGAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQKLYLF*TLRKTP
Trigger: TGGGGTCTTTCTTAGAGTTCAGAAAAGGTATAGCTT...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR GCA 90 bp CGCTCTTTCTCCTCAAGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGCTTCGATAAATTTCTaGATAGTCAGTAGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: RSFSSRSRVTASMSLYVLASINF*IVSSLA
Trigger: TGCAAGACTACTGACTATGCAGAAATTTATCGAAGC...TAAGACATATAATGACATAGATGCTGTCACTCGGCTTCTTGAGGAGAAAGAGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418790.5
3UTR CAA 72 bp ATTCACTGGTTTCCTATCCATGGGATAAGAACACACTaGGGAGTTTCAGTGCTTCTCAAAAGGAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IHWFPIHGIRTH*GVSVLLKRKEE
Trigger: TTCTTCTTTCCTTTTGAGAAGCACTGAAACTCCCAAGTGTGTTCTTATCCCATGGATAGGAAACCAGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
3UTR CAA 72 bp GTACAACTTCTAGAAGATGCACTTAATGGTGCTTCTTaGCACTTCCAGAACTCACCTTCTATTCTACCTGTA +
Preference number: 4 (lower is better)
Translates to: VQLLEDALNGAS*HFQNSPSILPV
Trigger: TACAGGTAGAATAGAAGGTGAGTTCTGGAAGTGCAAAGAAGCACCATTAAGTGCATCTTCTAGAAGTTGTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAGGTTCTAAAGGCAAAGGAAAGAACTAGAAGACCACAGTGCACATGCTTGTCTCAAAAGCCACAACCTTaGTATATGAAGTTCAAATCA +
Preference number: 4 (lower is better)
Translates to: KVLKAKERTRRPQCTCLSQKPQP*YMKFKS
Trigger: TGATTTGAACTTCATATAGCAAGGTTGTGGCTTTTG...AGACAAGCATGTGCACTGTGGTCTTCTAGTTCTTTCCTTTGCCTTTAGAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CCA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGATCAGAATACCAGTGTaGTTTCCATCATTTGAACTT +
Preference number: 4 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTIRIPV*FPSFEL
Trigger: AAGTTCAAATGATGGAAACCACACTGGTATTCTGAT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
CDS-3UTR CCA 90 bp TTTCTCCTCAAGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATTTCTTAACGACAGTCTaGAGCCAAAACAGTAAAGTG +
Preference number: 4 (lower is better)
Translates to: FLLKKPSDSIYVIICLSHFLTTV*SQNSKV
Trigger: CACTTTACTGTTTTGGCTCCAGACTGTCGTTAAGAA...ATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCTTCTTGAGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418790.5
CDS-3UTR GCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATGTTCTGATTTGGCTTTaGATCGTAAGTGTAACACAG +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNVLIWL*IVSVTQ
Trigger: CTGTGTTACACTTACGATGCAAAGCCAAATCAGAAC...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
3UTR CAA 72 bp TCTCTCTCTATCCTCCAAGGTAAGTTCTTTGTTGACTaGATAAGCTTTAGTCCTTCTGTACAACTTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SLSILQGKFFVD*ISFSPSVQLLE
Trigger: TTCTAGAAGTTGTACAGAAGGACTAAAGCTTATCAAGTCAACAAAGAACTTACCTTGGAGGATAGAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR GCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATTTCTTCATTTTCCACTaGGCAAGCTTTTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNFFIFH*ASFCLF
Trigger: AAAAAGGCAAAAGCTTGCGCAGTGGAAAATGAAGAA...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR GCA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATGCTTCGATAAATTTCTaGATAGTCAGTAGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNASINF*IVSSLA
Trigger: TGCAAGACTACTGACTATGCAGAAATTTATCGAAGC...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS CCA 90 bp TTCTCCCGGCGCAGGGACAGCCGCCTCAGCGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGCGTCCCCGGCTTCTTACTCCGCTCA +
Preference number: 5 (lower is better)
Translates to: FSRRRDSRLSAVSRS*EPGVPGVPGFLLRS
Trigger: TGAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGCGGCTGTCCCTGCGCCGGGAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp GCGCAGGGACAGCCGCCTCAGCGCCGTCTCCAGGTCGTGGGAGCCTaGGGTGCCCGGCGTCCCCGGCTTCTTACTCCGCTCATCGTTTCC +
Preference number: 5 (lower is better)
Translates to: AQGQPPQRRLQVVGA*GARRPRLLTPLIVS
Trigger: GGAAACGATGAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGCGGCTGTCCCTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp GGGACAGCCGCCTCAGCGCCGTCTCCAGGTCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCTTACTCCGCTCATCGTTTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GTAASAPSPGRGSLG*PASPASYSAHRFPG
Trigger: ACCTGGGAAACGATGAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGCGGCTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp TGGGCCCCCAGGGCACACACTGCGCCCTGGCCTGGGCCGCAGACATaGCCTGGCTCAGCTGAAGTGGAGGGGTGTACACAAAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WAPRAHTAPWPGPQT*PGSAEVEGCTQSSW
Trigger: CCAGGAGCTTTGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGGCCAGGGCGCAGTGTGTGCCCTGGGGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000396175.5
CDS-3UTR CAA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLPEFTT*ATPNLL
Trigger: CAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGG...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS TCA 90 bp CATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGGCCTAGGCTaGGCACCACCCTCAGAGGAACTCAAACCAGCAGCGCGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HCHTCQPEGRDGGLG*APPSEELKPAARVA
Trigger: AGCCACCCGCGCTGCTGGTTTGAGTTCCTCTGAGGGTGGTGCTCAGCCTAGGCCTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS CCA 90 bp CCGAAGGGGGCACGGAGTTGGCCAAAGTGTCGTCGTGCAGAGCTGTaGCGTCCAGCTTGGCAGGTTTCACGGGGAGGTGCCCACTGCCAT +
Preference number: 5 (lower is better)
Translates to: PKGARSWPKCRRAEL*RPAWQVSRGGAHCH
Trigger: ATGGCAGTGGGCACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCCCCCAAGGTGAGGTaGGGCCAACTGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATAPKVR*GQLLPV
Trigger: CACTGGCAGCAGTTGGCCCAACCTCACCTTGGGGGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSVRKP*VTTPGR
Trigger: CCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACAGCCACACGAGCCCCAGGGATGTGCTCATGGTGGTCGTGGACTCACGGGTGTCAGAGTCTGGGGCAGTaGGGCAGATGGCCCCCGGTA +
Preference number: 5 (lower is better)
Translates to: TATRAPGMCSWWSWTHGCQSLGQ*GRWPPV
Trigger: TACCGGGGGCCATCTGCCCAACTGCCCCAGACTCTG...ACACCCGTGAGTCCACGACCACCATGAGCACATCCCTGGGGCTCGTGTGGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS TCA 90 bp AGTACACTTCGTCCAGGTCAACATCCAGCGTCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGTCCAGGATGCCCCCAAGGTGAGGTT +
Preference number: 5 (lower is better)
Translates to: STLRPGQHPASGSPW*PHRAGGPGCPQGEV
Trigger: AACCTCACCTTGGGGGCATCCTGGACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCTGGATGTTGACCTGGACGAAGTGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp TTGCATGCCTCCGAAGGGGGCACGGAGTTGGCCAAAGTGTCGTCGTaGAGAGCTGTGGCGTCCAGCTTGGCAGGTTTCACGGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LHASEGGTELAKVSS*RAVASSLAGFTGRC
Trigger: GCACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGAGGCATGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp TCCTTCAGCCATGCCTCCAGCTCCCAGGCCTGTGGCGGGCCCCTCTaGAAGCCTCGGCCTCCAATGTCTTACCTCCTCCCTGATGTGTTC +
Preference number: 5 (lower is better)
Translates to: SFSHASSSQACGGPL*KPRPPMSYLLPDVF
Trigger: GAACACATCAGGGAGGAGGTAAGACATTGGAGGCCGAGGCTTCCAGAGGGGCCCGCCACAGGCCTGGGAGCTGGAGGCATGGCTGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469506.3
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCGCCGGATGCCACTATaGAGCTGCAGCCCACCGATG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATRRMPL*SCSPPM
Trigger: CATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS GCA 90 bp CCTGCATCTCCTCTGGGGAAGCCTGAGGCCGGCTCGGGTAACTTCTaGTGCCTGAGACAGTCACACGTGCTTGGGACCTCTCACCTGAGG +
Preference number: 5 (lower is better)
Translates to: PASPLGKPEAGSGNF*CLRQSHVLGTSHLR
Trigger: CCTCAGGTGAGAGGTCCCAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCCGGCCTCAGGCTTCCCCAGAGGAGATGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS CCA 90 bp AGGCTAGGACTGCATGGTTGCATGCCTCCGAAGGGGGCACGGAGTTaGCCAAAGTGTCGTCGTGCAGAGCTGTGGCGTCCAGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: RLGLHGCMPPKGARS*PKCRRAELWRPAWQ
Trigger: CTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCTCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGGAGGGCTCGTGCACTaGAACTCAAAGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATGGLVH*NSKEGG
Trigger: CCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTCC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATGAAGGGGGCACGGAGTaGGCCAAAGTGTCGTCGTGC +
Preference number: 5 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDEGGTE*AKVSSC
Trigger: GCACGACGACACTTTGGCCAACTCCGTGCCCCCTTC...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS TCA 90 bp CGGGCCCCTCTGGAAGCCTCGGCCTCCAATGTCTTACCTCCTCCCTaGTGTGTTCCACCTGCTCCTCCAGCAGCTCGTTCCTCTCGGTTA +
Preference number: 5 (lower is better)
Translates to: RAPLEASASNVLPPP*CVPPAPPAARSSRL
Trigger: TAACCGAGAGGAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAGGGAGGAGGTAAGACATTGGAGGCCGAGGCTTCCAGAGGGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469506.3
CDS GCA 90 bp GCATCTCCTCTGGGGAAGCCTGAGGCCGGCTCGGGTAACTTCTGCTaGCTGAGACAGTCACACGTGCTTGGGACCTCTCACCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASPLGKPEAGSGNFC*LRQSHVLGTSHLRS
Trigger: AGACCTCAGGTGAGAGGTCCCAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCCGGCCTCAGGCTTCCCCAGAGGAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 90 bp CTTCCACAGCCTCGCTTATGTAGTGTTCCTCAGGGATGCCCAGGCTaGAGGCTAGGACTGCATGGTTGCATGCCTCCGAAGGGGGCACGG +
Preference number: 5 (lower is better)
Translates to: LPQPRLCSVPQGCPG*RLGLHGCMPPKGAR
Trigger: CCGTGCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACTACATAAGCGAGGCTGTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGCCCCCAAGGTGAGGTaGGGCCAACTGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSAPKVR*GQLLPV
Trigger: CACTGGCAGCAGTTGGCCCAACCTCACCTTGGGGGC...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: VHHLLSPKCLPTECSQADSVRKP*VTTPGR
Trigger: CCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPEFTT*ATPNLL
Trigger: CAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCCGGCCCTGTCCCAGCTCTGGGGGTCGTACACGGCAGCAGAAATGCCCCGCTCCGTAAGCTAGTTTGTTaGGAGAGCTTAGCACCCATC +
Preference number: 5 (lower is better)
Translates to: AGPVPALGVVHGSRNAPLRKLVC*ESLAPI
Trigger: GATGGGTGCTAAGCTCTCCAAACAAACTAGCTTACG...GAGCGGGGCATTTCTGCTGCCGTGTACGACCCCCAGAGCTGGGACAGGGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGCTAGGACTGCATGGTaGCATGCCTCCGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQARTAW*HASEGG
Trigger: GCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAGC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: VWPPAWISSGWCCHKLELMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TGGAGACGGACACGTCGGTCTGGCTCTCGCTGCTGCGGACGTTCTTTTCTCTCAATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: WRRTRRSGSRCCGRSFLSMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...TGAGAGAAAAGAACGTCCGCAGCAGCGAGAGCCAGACCGACGTGTCCGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQSVRKP*VTTPGR
Trigger: CCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCT...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGGAGCTGGCTGGCTaGGAAGCCAGGAAATTGTCG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMELAG*EARKLS
Trigger: CGACAATTTCCTGGCTTCCAAGCCAGCCAGCTCCAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATTLSTR*RLETDT
Trigger: CGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCGCCGGATGCCACTATaGAGCTGCAGCCCACCGATG +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVRRMPL*SCSPPM
Trigger: CATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCGGAATACCAAAGCCTaGTTTCCCCCTGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATRNTKA*FPPGTG
Trigger: ACCGGTTCCAGGGGGAAACAAGGCTTTGGTATTCCG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS CCA 90 bp CCATGGGAAACAGGCCCAGTGAGTGGTAGCGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGAGGTTCTTCAGCTCCTCCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: PWETGPVSGSAETWY*AWFCSGGSSAPPAP
Trigger: AGGCGCAGGAGGAGCTGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp AGTCTCCGTGGAGTGCATGGTGTGGCCACCGGCGTGGATTTCAAGTaGCTGGTGCTGCCACAAGCTGGAGTTGGGGCTGAGTTAAGGCTT +
Preference number: 5 (lower is better)
Translates to: SLRGVHGVATGVDFK*LVLPQAGVGAELRL
Trigger: AAGCCTTAACTCAGCCCCAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACACCATGCACTCCACGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000673621.2
CDS-3UTR CAA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGTCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: FMAYVCIVTPASQRGGTESSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GGCCACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACTCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: GHPKPPDFVHEVEVGDGHSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...GTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGCTGTTGGTCTTGTaGTCGAGGACGACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMLLVL*SRTTLP
Trigger: AGGCAACGTCGTCCTCGACAACAAGACCAACAGCAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCCCCCAAGGTGAGGTaGGGCCAACTGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVAPKVR*GQLLPV
Trigger: CACTGGCAGCAGTTGGCCCAACCTCACCTTGGGGGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGGAGGGCTCGTGCACTaGAACTCAAAGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSGGLVH*NSKEGG
Trigger: CCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTCC...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp CAGTCAAGGTGGGGACATGGGCTCGCCCTGAGTTCACCACTTTGGCCACCCCAAATGGAGCTGGCTGGCTaGGAAGCCAGGAAATTGTCG +
Preference number: 5 (lower is better)
Translates to: QSRWGHGLALSSPLWPPQMELAG*EARKLS
Trigger: CGACAATTTCCTGGCTTCCAAGCCAGCCAGCTCCAT...TTGGGGTGGCCAAAGTGGTGAACTCAGGGCGAGCCCATGTCCCCACCTTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGCCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATPNLLT*STRLRL
Trigger: CAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGG...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQPEFTT*ATPNLL
Trigger: CAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CGGATTAAAAGGCAGGGACCAGACCACCATGGATACAAATCCCAAGACAGAGGACCTAAGGGACCATCCTaGGGGGTGCCCCCGACCCCC +
Preference number: 5 (lower is better)
Translates to: RIKRQGPDHHGYKSQDRGPKGPS*GVPPTP
Trigger: GGGGGTCGGGGGCACCCCCAAGGATGGTCCCTTAGG...TCCTCTGTCTTGGGATTTGTATCCATGGTGGTCTGGTCCCTGCCTTTTAATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CAA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCGCTGTGGCGTCCAGCTaGGCAGGTTTCACGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LFGELSTHQDARGESHRSAVASS*AGFTGR
Trigger: CCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGC...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS TCA 90 bp AGACATAAACTCCAAAGGCACTTCAGAGAACAGAGAGAGCCTCCATaGGAGCTCAGCCCCGGCAGTACCTCGCACAGCCACCCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: RHKLQRHFREQREPP*ELSPGSTSHSHPPV
Trigger: CACGGGAGGGTGGCTGTGCGAGGTACTGCCGGGGCTGAGCTCTCATGGAGGCTCTCTCTGTTCTCTGAAGTGCCTTTGGAGTTTATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS GCA 90 bp TGGGAGCATCTTCCACAGCCTCGCTTATGTAGTGTTCCTCAGGGATaGCCAGGCTGCAGGCTAGGACTGCATGGTTGCATGCCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: WEHLPQPRLCSVPQG*PGCRLGLHGCMPPK
Trigger: CTTCGGAGGCATGCAACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACTACATAAGCGAGGCTGTGGAAGATGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp CACATCACAGGCGTTTGTCCGAATGAGCTTGCCGTGGCAGAGTCCTaGCAGAGGCTGAGCCCTGACGGGCTGCCCGAATTGAAAAACCAA +
Preference number: 5 (lower is better)
Translates to: HITGVCPNELAVAES*QRLSPDGLPELKNQ
Trigger: TTGGTTTTTCAATTCGGGCAGCCCGTCAGGGCTCAGCCTCTGCCAGGACTCTGCCACGGCAAGCTCATTCGGACAAACGCCTGTGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS CCA 90 bp GAAACAGGCCCAGTGAGTGGTAGCGCCGAGACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCTTCAGCTCCTCCTGCGCCTCATGCA +
Preference number: 5 (lower is better)
Translates to: ETGPVSGSAETWYWA*FCSGGSSAPPAPHA
Trigger: TGCATGAGGCGCAGGAGGAGCTGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGGGCCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGTCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FMAYVCIVTPASQRGGTESFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATASSVF*ASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGTCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TACACGGCAGCAGAAATGCCCCGCTCCTTCAACAGCCACACGAGCCCCAGGGATCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: YTAAEMPRSFNSHTSPRDLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...ATCCCTGGGGCTCGTGTGGCTGTTGAAGGAGCGGGGCATTTCTGCTGCCGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCCCCCAAGGTGAGGTaGGGCCAACTGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRAPKVR*GQLLPV
Trigger: CACTGGCAGCAGTTGGCCCAACCTCACCTTGGGGGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGCCGGATGCCACTATaGAGCTGCAGCCCACCGATG +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRRMPL*SCSPPM
Trigger: CATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACGGAATACCAAAGCCTaGTTTCCCCCTGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQRNTKA*FPPGTG
Trigger: ACCGGTTCCAGGGGGAAACAAGGCTTTGGTATTCCG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGCTAGGACTGCATGGTaGCATGCCTCCGAAGGGGGC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVARTAW*HASEGG
Trigger: GCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAGC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS TCA 90 bp ACAGTCACACGTGCTTGGGACCTCTCACCTGAGGTCTCTGGGTGCTaGACTGGAGTGGAGGTAGCTAGGCGTGGGAGAGAAATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: TVTRAWDLSPEVSGC*TGVEVARRGREMWS
Trigger: TGACCACATTTCTCTCCCACGCCTAGCTACCTCCACTCCAGTTCAGCACCCAGAGACCTCAGGTGAGAGGTCCCAAGCACGTGTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 90 bp AGCCTCGGCCTCCAATGTCTTACCTCCTCCCTGATGTGTTCCACCTaGTCCTCCAGCAGCTCGTTCCTCTCGGTTAGGGTCTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLGLQCLTSSLMCST*SSSSSFLSVRVLFF
Trigger: GAAGAACAAGACCCTAACCGAGAGGAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAGGGAGGAGGTAAGACATTGGAGGCCGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469506.3
CDS CCA 90 bp CAGACGAGCGGAAGCTACAGACAGAGAACCACTACGGATGGTGCCTaGAACAGAGGTGAGAATGGCCCAAAACTCTGCCTCCGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QTSGSYRQRTTTDGA*NRGENGPKLCLRER
Trigger: CCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGTGGTTCTCTGTCTGTAGCTTCCGCTCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSVRKP*VTTPGR
Trigger: CCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGGAGGGCTCGTGCACTaGAACTCAAAGGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVGGLVH*NSKEGG
Trigger: CCCACCCTCCTTTGAGTTCAAGTGCACGAGCCCTCC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACCTAAGGGACCATCCTaGGGGGTGCCCCCGACCCCC +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPPKGPS*GVPPTP
Trigger: GGGGGTCGGGGGCACCCCCAAGGATGGTCCCTTAGG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS GCA 90 bp TGGAACAGAGGTGAGAATGGCCCAAAACTCTGCCTCCGGGAAAGGTaGCAAGTTTACAGGACTTATCGTGGTGCCCTCACCAGACCCCTC +
Preference number: 5 (lower is better)
Translates to: WNRGENGPKLCLRER*QVYRTYRGALTRPL
Trigger: GAGGGGTCTGGTGAGGGCACCACGATAAGTCCTGTAAACTTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACCTCTGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS CCA 90 bp AGGAATCCATGGGAAACAGGCCCAGTGAGTGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGTTCCGGAGGTTCTTCAGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RNPWETGPVSGSAET*YWAWFCSGGSSAPP
Trigger: AGGAGGAGCTGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCCATGGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTTGTGAGGTCAATGTaGGCATCTGGAGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVVRSM*ASGEMR
Trigger: TCTCATTTCTCCAGATGCCAACATTGACCTCACAAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: VHHLLSPKCLPTECSQADVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: VHHLLSPKCLPTECSQADMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp ACCCAGATGTGTTATGACCCGTGCCGCGTGACAGCTCGTGGTGTGCCAGCCACGGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: TQMCYDPCRVTARGVPATVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...CGTGGCTGGCACACCACGAGCTGTCACGCGGCACGGGTCATAACACATCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAATCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPNLLT*STRLRL
Trigger: CAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGCCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSPNLLT*STRLRL
Trigger: CAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGG...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGTGGTATTATGCCTGGTaGTGGTTCTTCCCCTCTACA +
Preference number: 5 (lower is better)
Translates to: VWPPAWISSGWCCHKLELWYYAW*WFFPST
Trigger: TGTAGAGGGGAAGAACCACAACCAGGCATAATACCA...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp TTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGACCACAGTGCACATGCTaGTCTTTCCTCGGCGAGTTT +
Preference number: 5 (lower is better)
Translates to: FHGLCVHCHTCQPEGRDGPQCTC*SFLGEF
Trigger: AAACTCGCCGAGGAAAGACAAGCATGTGCACTGTGG...TCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS TCA 90 bp CTCTTGCTGGCGGGCAGCATCTTCCGTCTTCTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGACATTGGCATCCCTCAGCTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LLLAGSIFRLLGQFL*DTSNLDIGIPQLLH
Trigger: GTGAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp ACTACGGATGGTGCCTGGAACAGAGGTGAGAATGGCCCAAAACTCTaGCTCCGGGAAAGGTGCCAAGTTTACAGGACTTATCGTGGTGCC +
Preference number: 5 (lower is better)
Translates to: TTDGAWNRGENGPKL*LRERCQVYRTYRGA
Trigger: GGCACCACGATAAGTCCTGTAAACTTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS CCA 90 bp TCCTGGGTGTCATGCTGCCTGTGGGTTGGCTTCCTCTCTTCATCCTaGCAGTCGTATTCAAAACATTCTTCTTCCCCGCCCTTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: SWVSCCLWVGFLSSS*QSYSKHSSSPPLSR
Trigger: GCGAGACAAGGGCGGGGAAGAAGAATGTTTTGAATACGACTGCCAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCATGACACCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAACTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: FHGLCVHCHTCQPEGRDGASSVF*ASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGC...TCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: DPMIPRALSTKLFIPVATMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSVRKP*VTTPGR
Trigger: CCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGAGGGGAGGGACGGAGCTCACAGGGGCAATATaGCTCCCAAGAAGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: FMAYVCIVTPASQRGGTELTGAI*LPRSKN
Trigger: GTTTTTGCTTCTTGGGAGCAATATTGCCCCTGTGAG...CTCCGTCCCTCCCCTCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGCTGTGGCGTCCAGCTaGGCAGGTTTCACGGGGAGG +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPAVASS*AGFTGR
Trigger: CCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACCCCAAACCTCCTGACTTTGTCCACGAGGTTGAGGTTGGAGACGGACACGTCGGGAAGATCGGTGCTGTaGCACACATCAGTAATGGTG +
Preference number: 5 (lower is better)
Translates to: TPNLLTLSTRLRLETDTSGRSVL*HTSVMV
Trigger: CACCATTACTGATGTGTGCAACAGCACCGATCTTCC...CGACGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACAGAGTCTGGGGCAGTaGGGCAGATGGCCCCCGGTA +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPQSLGQ*GRWPPV
Trigger: TACCGGGGGCCATCTGCCCAACTGCCCCAGACTCTG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQSFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TTTCCTCGGCGAGTTTCATGGCCTATGTGTGCATTGTCACACCTGCCAGCCAGACTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FPRRVSWPMCALSHLPARLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCATGAAACTCGCCGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp TTGTTTGGAGAGCTTAGCACCCATCAAGATGCCCGAGGTGAGAGTCACAGGAGCCTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFGELSTHQDARGESHRSLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...GCTCCTGTGACTCTCACCTCGGGCATCTTGATGGGTGCTAAGCTCTCCAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GGGGCACTTCCTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: GALPVGSEERAGRTQGLQVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...TTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAGGAAGTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAATGCTGTTGGTCTTGTaGTCGAGGACGACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVMLLVL*SRTTLP
Trigger: AGGCAACGTCGTCCTCGACAACAAGACCAACAGCAT...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACG +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRTLSTR*RLETDT
Trigger: CGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACCAAACCTCCTGACTTaGTCCACGAGGTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVPNLLT*STRLRL
Trigger: CAACCTCAACCTCGTGGACAAAGTCAGGAGGTTTGG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCGCCGGATGCCACTATaGAGCTGCAGCCCACCGATG +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFRRMPL*SCSPPM
Trigger: CATCGGTGGGCTGCAGCTCAATAGTGGCATCCGGCG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGATGTCTCGCAGGGACATaGCTGAAGTCACCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRCLAGT*LKSPQS
Trigger: GCTTTGGGGTGACTTCAGCAATGTCCCTGCGAGACA...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTCTTCTTCCCCGCCCTaGTCTCGCAGGGACATTGCT +
Preference number: 5 (lower is better)
Translates to: DPMIPRALSTKLFIPVATSSSPP*SRRDIA
Trigger: AGCAATGTCCCTGCGAGACAAGGGCGGGGAAGAAGA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS TCA 90 bp AAGCTACAGACAGAGAACCACTACGGATGGTGCCTGGAACAGAGGTaGGAATGGCCCAAAACTCTGCCTCCGGGAAAGGTGCCAAGTTTA +
Preference number: 5 (lower is better)
Translates to: KLQTENHYGWCLEQR*EWPKTLPPGKVPSL
Trigger: TAAACTTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGTGGTTCTCTGTCTGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 90 bp TCCTCTCGGTTAGGGTCTTGTTCTTCTTCAACAACGACTGGCCGATaGGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SSRLGSCSSSTTTGR*ERPILNPALSPQEA
Trigger: GGCTTCTTGAGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000469506.3
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp AGCTCGTTCCTCTCGGTTAGGGTCTTGTTCTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCTTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SSFLSVRVLFFFNND*PMRAANSKSRSFSS
Trigger: TGAGGAGAAAGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAGGAACGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000469506.3
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGACGGGCTGCCCGAATaGAAAAACCAATGCCATGTG +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRDGLPE*KNQCHV
Trigger: CACATGGCATTGGTTTTTCAATTCGGGCAGCCCGTC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGGTTGTGAGGTCAATGTaGGCATCTGGAGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVVVRSM*ASGEMR
Trigger: TCTCATTTCTCCAGATGCCAACATTGACCTCACAAC...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATTCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPKCLPTECSQADNSSWDSFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACACTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAACTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GAAAGAAGAAAGGACCCCACCTTCCCCCAGGTTAGCACAGGTGACGTCCTCGTGCCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: ERRKDPTFPQVSTGDVLVPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...CACGAGGACGTCACCTGTGCTAACCTGGGGGAAGGTGGGGTCCTTTCTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: DPMIPRALSTKLFIPVATSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCATGCTGTTGGTCTTGTaGTCGAGGACGACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSMLLVL*SRTTLP
Trigger: AGGCAACGTCGTCCTCGACAACAAGACCAACAGCAT...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GTGTGGCCACCGGCGTGGATTTCAAGTGGCTGGTGCTGCCACAAGCTGGAGTTGTCTTCCCCTCTACATTaGGTGTTGACACATTTCTTT +
Preference number: 5 (lower is better)
Translates to: VWPPAWISSGWCCHKLELSSPLH*VLTHFF
Trigger: AAAGAAATGTGTCAACACCAAATGTAGAGGGGAAGA...CAACTCCAGCTTGTGGCAGCACCAGCCACTTGAAATCCACGCCGGTGGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAGACTCCACAAAAGCTTaGCCTTCCCAACACAAGGGG +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQDSTKA*PSQHKG
Trigger: CCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGTC...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 90 bp TTCTGCAAATCAACTATTTGCGATAGCAGGTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCCGTCTTCTTGGCCAGTTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: FCKSTICDSRCVISS*WRAASSVFLASSSE
Trigger: CTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCTGCTATCGCAAATAGTTGATTTGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp TGGTTGGAGCCGGGGATGTTCATGGGAGAAGGGGTCAGAGATCTCTaGTTGACAACCTGGTTGATGTTTCTTACTGTCTCAAAGACACGC +
Preference number: 5 (lower is better)
Translates to: WLEPGMFMGEGVRDL*LTTWLMFLTVSKTR
Trigger: GCGTGTCTTTGAGACAGTAAGAAACATCAACCAGGTTGTCAAGCAGAGATCTCTGACCCCTTCTCCCATGAACATCCCCGGCTCCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 90 bp CTTTCAGCACATAAAACCTCTTCCAAGAGGTCCTGGGTGTCATGCTaGCTGTGGGTTGGCTTCCTCTCTTCATCCTGGCAGTCGTATTCA +
Preference number: 5 (lower is better)
Translates to: LSAHKTSSKRSWVSC*LWVGFLSSSWQSYS
Trigger: TGAATACGACTGCCAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCATGACACCCAGGACCTCTTGGAAGAGGTTTTATGTGCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTTTGTCCGAATGAGCTaGCCGTGGCAGAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFFVRMS*PWQSPG
Trigger: GCCAGGACTCTGCCACGGCAAGCTCATTCGGACAAA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTATCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQASSVF*ASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGC...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRASSVF*ASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHASSVF*ASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGC...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCCACTCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: CKAVGEHPNQHKAYPFSHSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...GTGGCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAATCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATGCCCCCAAGGTGAGGTaGGGCCAACTGCTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHAPKVR*GQLLPV
Trigger: CACTGGCAGCAGTTGGCCCAACCTCACCTTGGGGGC...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCCTGAGTTCACCACTTaGGCCACCCCAAACCTCCTG +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFPEFTT*ATPNLL
Trigger: CAGGAGGTTTGGGGTGGCCAAAGTGGTGAACTCAGG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACGTAAGCTAGTTTGTTaGGAGAGCTTAGCACCCATC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVRKLVC*ESLAPI
Trigger: GATGGGTGCTAAGCTCTCCAAACAAACTAGCTTACG...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGGGATAAGAACACACTaGGGAGTTTCAGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVGIRTH*GVSVLL
Trigger: GAGAAGCACTGAAACTCCCAAGTGTGTTCTTATCCC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATGGTATTATGCCTGGTaGTGGTTCTTCCCCTCTACA +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVWYYAW*WFFPST
Trigger: TGTAGAGGGGAAGAACCACAACCAGGCATAATACCA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGTGTCTCGCAGGGACATaGCTGAAGTCACCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQCLAGT*LKSPQS
Trigger: GCTTTGGGGTGACTTCAGCAATGTCCCTGCGAGACA...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341421.7
CDS-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATACTGCTCAGCTCCACTaGGAAATCACCAGGGGACTT +
Preference number: 5 (lower is better)
Translates to: SPKCLPTECSQADNSSWDTAQLH*EITRGL
Trigger: AAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAGT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTACTGCTCAGCTCCACTaGGAAATCACCAGGGGACTT +
Preference number: 5 (lower is better)
Translates to: KCLPTECSQADNSSWDSATAQLH*EITRGL
Trigger: AAGTCCCCTGGTGATTTCCAAGTGGAGCTGAGCAGT...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTGACTCCACAAAAGCTTaGCCTTCCCAACACAAGGGG +
Preference number: 5 (lower is better)
Translates to: DPMIPRALSTKLFIPVATDSTKA*PSQHKG
Trigger: CCCCTTGTGTTGGGAAGGCAAAGCTTTTGTGGAGTC...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGAAGGGGGCACGGAGTaGGCCAAAGTGTCGTCGTGC +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTEGGTE*AKVSSC
Trigger: GCACGACGACACTTTGGCCAACTCCGTGCCCCCTTC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS CCA 90 bp TGCAAATCAACTATTTGCGATAGCAGGTGTGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTCTTCTTGGCCAGTTCCTCTGAGATA +
Preference number: 5 (lower is better)
Translates to: CKSTICDSRCVISSC*RAASSVFLASSSEI
Trigger: TATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCTGCTATCGCAAATAGTTGATTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp GCACATAAAACCTCTTCCAAGAGGTCCTGGGTGTCATGCTGCCTGTaGGTTGGCTTCCTCTCTTCATCCTGGCAGTCGTATTCAAAACAT +
Preference number: 5 (lower is better)
Translates to: AHKTSSKRSWVSCCL*VGFLSSSWQSYSKH
Trigger: ATGTTTTGAATACGACTGCCAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCATGACACCCAGGACCTCTTGGAAGAGGTTTTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS-3UTR CAA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTGTGTGTGATCTCCTCTaGCTGGCGGGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGVCDLL*LAGSIF
Trigger: GAAGATGCTGCCCGCCAGCAAGAGGAGATCACACAC...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTAGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: SPKCLPTECSQADNSSWDMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAATGGAGCTGGCTGGCTaGGAAGCCAGGAAATTGTCG +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPMELAG*EARKLS
Trigger: CGACAATTTCCTGGCTTCCAAGCCAGCCAGCTCCAT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAACTTTGTCCACGAGGTaGAGGTTGGAGACGGACACG +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPTLSTR*RLETDT
Trigger: CGTGTCCGTCTCCAACCTCAACCTCGTGGACAAAGT...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGGGATAAGAACACACTaGGGAGTTTCAGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRGIRTH*GVSVLL
Trigger: GAGAAGCACTGAAACTCCCAAGTGTGTTCTTATCCC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACGGAATACCAAAGCCTaGTTTCCCCCTGGAACCGGT +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPRNTKA*FPPGTG
Trigger: ACCGGTTCCAGGGGGAAACAAGGCTTTGGTATTCCG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAAAATCACCAGGGGACTaGAGAATCTTCCCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTKSPGD*RIFPLD
Trigger: GTCTAAGGGGAAGATTCTCAAGTCCCCTGGTGATTT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACCTTAATGGTGCTTCTTaGCACTTCCAGAACTCACCT +
Preference number: 5 (lower is better)
Translates to: VHHLLSPKCLPTECSQADLNGAS*HFQNSP
Trigger: AGGTGAGTTCTGGAAGTGCAAAGAAGCACCATTAAG...GTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 90 bp AGGAAAGAATGGACTTCACAGCACCATCAACGTCAAGTAAAACGCTaGCATGCCTCCCCGCCCTTCCAGAATACTGGACAGAAGAATATC +
Preference number: 5 (lower is better)
Translates to: RKEWTSQHHQRQVKR*HASPPFQNTGQKNI
Trigger: GATATTCTTCTGTCCAGTATTCTGGAAGGGCGGGGAGGCATGGCAGCGTTTTACTTGACGTTGATGGTGCTGTGAAGTCCATTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418790.5
ENST00000449246.5
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCCTCTTCAACGGGGTaGAGCAAACGGACTCGGGCT +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSSSTG*SKRTRA
Trigger: AGCCCGAGTCCGTTTGCTCAACCCCGTTGAAGAGGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGACCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGCTCGTGGTGTGCCAGCCACGGAATTCACTGGTTTCCTATCCATGGGATAAGAGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: SSWCASHGIHWFPIHGIRVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...TCTTATCCCATGGATAGGAAACCAGTGAATTCCGTGGCTGGCACACCACGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQMAEDW*EPGMFM
Trigger: CATGAACATCCCCGGCTCCAACCAGTCCTCGGCCAT...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGATGCTGTTGGTCTTGTaGTCGAGGACGACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: THELTLKKGGLRRYKTHLMLLVL*SRTTLP
Trigger: AGGCAACGTCGTCCTCGACAACAAGACCAACAGCAT...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCTTCTTCCCCGCCCTaGTCTCGCAGGGACATTGCT +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSSSPP*SRRDIA
Trigger: AGCAATGTCCCTGCGAGACAAGGGCGGGGAAGAAGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396175.5
CDS-3UTR CAA 90 bp GATCCCATGATTCCCAGAGCTCTGAGCACAAAGCTTTTCATCCCAGTGGCAACTAAATCACCAGGGGACTaGAGAATCTTCCCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: DPMIPRALSTKLFIPVATKSPGD*RIFPLD
Trigger: GTCTAAGGGGAAGATTCTCAAGTCCCCTGGTGATTT...AGTTGCCACTGGGATGAAAAGCTTTGTGCTCAGAGCTCTGGGAATCATGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp ACCTGTAAGGCTGTAGGGGAGCATCCCAATCAACATAAGGCCTACCCCTTTAGCGAATTTGCCACAGGTTaGAGTACAGAGAGAACAAGC +
Preference number: 5 (lower is better)
Translates to: TCKAVGEHPNQHKAYPFSEFATG*STERTS
Trigger: GCTTGTTCTCTCTGTACTCAAACCTGTGGCAAATTC...GCTAAAGGGGTAGGCCTTATGTTGATTGGGATGCTCCCCTACAGCCTTACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGAAAGGAAGGCAATTaGCAGAGAGCTAACGGAGAC +
Preference number: 5 (lower is better)
Translates to: SPKCLPTECSQADNSSWDRKEGN*QRANGD
Trigger: GTCTCCGTTAGCTCTCTGCAAATTGCCTTCCTTTCT...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTCCTTCACGCAGTCATaGACCAGCTGCTGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTSFTQS*TSCCSF
Trigger: GAAGGAGCAGCAGCTGGTCAATGACTGCGTGAAGGA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ATGCCCCTGATACTAACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGCCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: MPLILTHELTLKKGGLRRPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...CCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGTTAGTATCAGGGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATAGTGCTCCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: KCLPTECSQADNSSWDSAPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...AGCACTATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AAGTTCTGCCTTACAGAAGTTCTGATTTGGCTTTGCATCGTAAGTGTAACACAGATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGC +
Preference number: 5 (lower is better)
Translates to: KFCLTEVLIWLCIVSVTQMHSAY*SSSSRS
Trigger: GCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCAT...CTGTGTTACACTTACGATGCAAAGCCAAATCAGAACTTCTGTAAGGCAGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATAGTTCCTGGGATGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: SPKCLPTECSQADNSSWDVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...ATCCCAGGAACTATTGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTATGCTGTTGGTCTTGTaGTCGAGGACGACGTTGCCT +
Preference number: 5 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGMLLVL*SRTTLP
Trigger: AGGCAACGTCGTCCTCGACAACAAGACCAACAGCAT...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTCTGGAGCTTCCTCTCTaGCTCCTCCTCAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGLELPL*LLLKEP
Trigger: AGGTTCTTTGAGGAGGAGCAAGAGAGGAAGCTCCAG...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTGTGGGATCGGAAGAAAGAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTATCTTCCCCTCTACATTaGGTGTTGACACATTTCTTT +
Preference number: 5 (lower is better)
Translates to: LWDRKKEQGGHKVSKSYVSSPLH*VLTHFF
Trigger: AAAGAAATGTGTCAACACCAAATGTAGAGGGGAAGA...TACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTCTTTCTTCCGATCCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTAGGGGAGCTACACCCATaGTTACAAATAGGAGGCATC +
Preference number: 5 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLGELHP*LQIGGI
Trigger: GATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCC...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGCAGACAATTTCAAGGGGAGTGTaGTGGCCTTCACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: FITSCLQSVSLLSVPRQTISRGV*WPSQMK
Trigger: TTTCATTTGTGAAGGCCACAACACTCCCCTTGAAAT...TGTCTGCCTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CACACCTTTAATGCTTGGGGACAGTGGGTGGAGTCAGCCAGAGCTCTTTTCCAAATTTCAAGGGGAGTGTaGTGGCCTTCACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: HTFNAWGQWVESARALFQISRGV*WPSQMK
Trigger: TTTCATTTGTGAAGGCCACAACACTCCCCTTGAAAT...TTGGAAAAGAGCTCTGGCTGACTCCACCCACTGTCCCCAAGCATTAAAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGGAAAAATATAAGCACTaGGTGGCTCTTGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLEKYKH*VALGRV
Trigger: TACTCTGCCAAGAGCCACCAAGTGCTTATATTTTTC...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCAGGAAGATCGGTGCTGTaGCACACATCAGTAATGGTG +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPGRSVL*HTSVMV
Trigger: CACCATTACTGATGTGTGCAACAGCACCGATCTTCC...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTAGCAATCTGGACATaGGCATCCCTCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLAIWT*ASLSSF
Trigger: GAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATTCCAACTGCAGCTCCTaGCGCATCGTTCCCTCAATC +
Preference number: 5 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHSNCSS*RIVPSI
Trigger: GATTGAGGGAACGATGCGCAAGGAGCTGCAGTTGGA...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AAAAAGGTTCATCACCTCCTGTCTCCAAAGTGTCTCCCTACTGAGTGTTCCCAGGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: KKVHHLLSPKCLPTECSQVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...CTGGGAACACTCAGTAGGGAGACACTTTGGAGACAGGAGGTGATGAACCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CTAGGGTCTTCTCTCTGGAAAAGCTTAGTGACGTTCTCCGAAGGTTTATTTGGTATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: LGSSLWKSLVTFSEGLFGMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...ACCAAATAAACCTTCGGAGAACGTCACTAAGCTTTTCCAGAGAGAAGACCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCGTAAGCTAGTTTGTTaGGAGAGCTTAGCACCCATC +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFRKLVC*ESLAPI
Trigger: GATGGGTGCTAAGCTCTCCAAACAAACTAGCTTACG...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGAGGCACGAGGTTGATTaGTCTAGCTTAGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTRHEVD*SSLGGG
Trigger: ACCCCCTCCTAAGCTAGACAAATCAACCTCGTGCCT...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTGGTATTATGCCTGGTaGTGGTTCTTCCCCTCTACA +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFWYYAW*WFFPST
Trigger: TGTAGAGGGGAAGAACCACAACCAGGCATAATACCA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGCCAAAAGCCACAACCTaGCTATATGAAGTTCAAATC +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLPKATT*LYEVQI
Trigger: GATTTGAACTTCATATAGCAAGGTTGTGGCTTTTGG...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp CCTGGACTCCAAATTGTAGACTCTAGGAGCCGCGCTCAGAACATACTGCATCTGTACAGAAGTTCTGATTaGGCTTTGCATCGTAAGTGT +
Preference number: 5 (lower is better)
Translates to: PGLQIVDSRSRAQNILHLYRSSD*ALHRKC
Trigger: ACACTTACGATGCAAAGCCAAATCAGAACTTCTGTA...CAGATGCAGTATGTTCTGAGCGCGGCTCCTAGAGTCTACAATTTGGAGTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCGTTGTGAGGTCAATGTaGGCATCTGGAGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFVVRSM*ASGEMR
Trigger: TCTCATTTCTCCAGATGCCAACATTGACCTCACAAC...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327628.10
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCACCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCGCCGAGACGTGGTATaGGGCATGGTTTTGTTCCGG +
Preference number: 5 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNRRDVV*GMVLFR
Trigger: CCGGAACAAAACCATGCCCAATACCACGTCTCGGCG...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp GGCAGGGGAGCTACACCCATTGTTACAAATAGGAGGCATCAGACTCTGTATTTACTTAATGGTGCTTCTTaGCACTTCCAGAACTCACCT +
Preference number: 5 (lower is better)
Translates to: GRGATPIVTNRRHQTLYLLNGAS*HFQNSP
Trigger: AGGTGAGTTCTGGAAGTGCAAAGAAGCACCATTAAG...TAAATACAGAGTCTGATGCCTCCTATTTGTAACAATGGGTGTAGCTCCCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CATGGGACAGCAGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTGAATTTGCCACAGGTTaGAGTACAGAGAGAACAAGC +
Preference number: 5 (lower is better)
Translates to: HGTAGSGQKCLAYKFSQFEFATG*STERTS
Trigger: GCTTGTTCTCTCTGTACTCAAACCTGTGGCAAATTC...AAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCTGCTGTCCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGTTTAATAGAGTTTGCTaGGAACCTCTCCCCGACACC +
Preference number: 5 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRFNRVC*EPLPDT
Trigger: GGTGTCGGGGAGAGGTTCCAAGCAAACTCTATTAAA...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS CCA 90 bp AGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAACCTCTTCCAAGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSRVTASMSLYVLVI*PTLSAHKTSSKRSW
Trigger: CCAGGACCTCTTGGAAGAGGTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp TGTCTTGGGTCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGTCAGAGATCTCTGCTaGACAACCTGGTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: CLGSLTSTTLPYSMQSHRVRDLC*TTWLMF
Trigger: AAACATCAACCAGGTTGTCAAGCAGAGATCTCTGAC...CCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGACCCAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp TCTTTAACAAGCACAACCTTACCTTATAGCATGCAGTCTCACAGGGGCAATATTTCCAGAATGATGCTGTaGGTCTTGTTGTCGAGGACG +
Preference number: 5 (lower is better)
Translates to: SLTSTTLPYSMQSHRGNISRMML*VLLSRT
Trigger: CGTCCTCGACAACAAGACCAACAGCATCATTCTGGA...AATATTGCCCCTGTGAGACTGCATGCTATAAGGTAAGGTTGTGCTTGTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGGGGATAAGAACACACTaGGGAGTTTCAGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTGIRTH*GVSVLL
Trigger: GAGAAGCACTGAAACTCCCAAGTGTGTTCTTATCCC...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGTGGTATTATGCCTGGTaGTGGTTCTTCCCCTCTACA +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTWYYAW*WFFPST
Trigger: TGTAGAGGGGAAGAACCACAACCAGGCATAATACCA...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTTGGCCTATGTGTGCATaGTCACACCTGCCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVWPMCA*SHLPAR
Trigger: TCTGGCTGGCAGGTGTGACAATGCACACATAGGCCA...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AGGCTCTGGACAAAAGTGCCTAGCATACAAGTTTTCCCAATTTCCTTCTATCATCTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: RLWTKVPSIQVFPISFYHLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...ATGATAGAAGGAAATTGGGAAAACTTGTATGCTAGGCACTTTTGTCCAGAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS-3UTR CAA 90 bp CCAAGTCCTATGTACACATTTTACAAAGTTTCCACACTTCCTCCATTAGGCACGCCACTGCGCAAGCTTTaGCCTTTTTCTGCAAATCAA +
Preference number: 5 (lower is better)
Translates to: PSPMYTFYKVSTLPPLGTPLRKL*PFSANQ
Trigger: TTGATTTGCAGAAAAAGGCAAAAGCTTGCGCAGTGG...CGTGCCTAATGGAGGAAGTGTGGAAACTTTGTAAAATGTGTACATAGGACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCCATCTTCCCCTCTACATTaGGTGTTGACACATTTCTTT +
Preference number: 5 (lower is better)
Translates to: AGRTQGLQVLCTHFTKFPSSPLH*VLTHFF
Trigger: AAAGAAATGTGTCAACACCAAATGTAGAGGGGAAGA...TGGAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp GAGCAGGGCGGACACAAGGTCTCCAAGTCCTATGTACACATTTTACAAAGTTTCTCTTCCCCTCTACATTaGGTGTTGACACATTTCTTT +
Preference number: 5 (lower is better)
Translates to: EQGGHKVSKSYVHILQSFSSPLH*VLTHFF
Trigger: AAAGAAATGTGTCAACACCAAATGTAGAGGGGAAGA...GAAACTTTGTAAAATGTGTACATAGGACTTGGAGACCTTGTGTCCGCCCTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
CDS-3UTR CAA 90 bp ACACATGAACTGACCCTGAAAAAGGGTGGCTTACGGAGGTACAAAACTCACTTGAGTTCTGATTTGGCTTaGCATCGTAAGTGTAACACA +
Preference number: 5 (lower is better)
Translates to: THELTLKKGGLRRYKTHLSSDLA*HRKCNT
Trigger: TGTGTTACACTTACGATGCAAAGCCAAATCAGAACT...CAAGTGAGTTTTGTACCTCCGTAAGCCACCCTTTTTCAGGGTCAGTTCATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATATGATGCTGTTGGTCTaGTTGTCGAGGACGACGTTG +
Preference number: 5 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNMMLLV*LSRTTL
Trigger: CAACGTCGTCCTCGACAACAAGACCAACAGCATCAT...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTAGGTACAAAACTCACTaGTCTCCACAGCCACCCCTT +
Preference number: 5 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVRYKTH*SPQPPL
Trigger: AAGGGGTGGCTGTGGAGACAAGTGAGTTTTGTACCT...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp AAAGCCACAACCTTGCTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCTCTCGGTTAGGGTCTaGTTCTTCTTCAACAACGAC +
Preference number: 5 (lower is better)
Translates to: KATTLLYEVQIRTHKPTNLSVRV*FFFNND
Trigger: GTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG...ATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAGCAAGGTTGTGGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS-3UTR CAA 90 bp CTATATGAAGTTCAAATCAGAACACATAAGCCCACAAATCACATTCAGGTGGTTAGAAAGGAAGGCAATTaGCAGAGAGCTAACGGAGAC +
Preference number: 5 (lower is better)
Translates to: LYEVQIRTHKPTNHIQVVRKEGN*QRANGD
Trigger: GTCTCCGTTAGCTCTCTGCAAATTGCCTTCCTTTCT...AACCACCTGAATGTGATTTGTGGGCTTATGTGTTCTGATTTGAACTTCATATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449246.5
CDS GCA 90 bp ACTCTTTCAGCACATAAAAGGAAGTATTTTAACGTCTCTTCAATTTaGTCGGTTGTGAGGTCAATGTTGGCATCTGGAGAAATGAGAGGT +
Preference number: 5 (lower is better)
Translates to: TLSAHKRKYFNVSSI*SVVRSMLASGEMRG
Trigger: ACCTCTCATTTCTCCAGATGCCAACATTGACCTCACAACCGAGCAAATTGAAGAGACGTTAAAATACTTCCTTTTATGTGCTGAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 90 bp AGAAGCCGAGTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAAGGAAGTATTTTAACGTCTCT +
Preference number: 5 (lower is better)
Translates to: RSRVTASMSLYVLVI*PTLSAHKRKYFNVS
Trigger: AGAGACGTTAAAATACTTCCTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCACTCGGCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CAGCCGCCTCAGCGCCGTCTCCAGGTCGTGGGAGCCTaGGGTGCCCGGCGTCCCCGGCTTCTTACTCCGCTC +
Preference number: 6 (lower is better)
Translates to: QPPQRRLQVVGA*GARRPRLLTPL
Trigger: GAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGCGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CGCAGGGACAGCCGCCTCAGCGCCGTCTCCAGGTCGTaGGAGCCTGGGGTGCCCGGCGTCCCCGGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: RRDSRLSAVSRS*EPGVPGVPGFL
Trigger: TAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGCGGCTGTCCCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp GCCTCAGCGCCGTCTCCAGGTCGTGGGAGCCTGGGGTaGCCGGCGTCCCCGGCTTCTTACTCCGCTCATCGT +
Preference number: 6 (lower is better)
Translates to: ASAPSPGRGSLG*PASPASYSAHR
Trigger: ACGATGAGCGGAGTAAGAAGCCGGGGACGCCGGGCACCCCAGGCTCCCACGACCTGGAGACGGCGCTGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS TCA 72 bp CGTCCAGGTCAACATCCAGCGTCCGGAAGCCCTTGGTaGCCACACCGGGCCGGGGGTCCAGGATGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: RPGQHPASGSPW*PHRAGGPGCPQ
Trigger: TTGGGGGCATCCTGGACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCTGGATGTTGACCTGGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS TCA 72 bp GCCCTGGCCTGGGCCGCAGACATGCCCTGGCTCAGCTaGAGTGGAGGGGTGTACACAAAGCTCCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: ALAWAADMPWLS*SGGVYTKLLAQ
Trigger: CTGGGCCAGGAGCTTTGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGGCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000396175.5
CDS CAA 72 bp ACTTCGTCCAGGTCAACATCCAGCGTCCGGAAGCCCTaGGTGACCACACCGGGCCGGGGGTCCAGGATGCCC +
Preference number: 6 (lower is better)
Translates to: TSSRSTSSVRKP*VTTPGRGSRMP
Trigger: GGGCATCCTGGACCCCCGGCCCGGTGTGGTCACCAAGGGCTTCCGGACGCTGGATGTTGACCTGGACGAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp AGGGCACACACTGCGCCCTGGCCTGGGCCGCAGACATaGCCTGGCTCAGCTGAAGTGGAGGGGTGTACACAA +
Preference number: 6 (lower is better)
Translates to: RAHTAPWPGPQT*PGSAEVEGCTQ
Trigger: TTGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGGCCAGGGCGCAGTGTGTGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000396175.5
CDS CCA 72 bp GGCGTTTGTCCGAATGAGCTTGCCGTGGCAGAGTCCTaGCAGAGGCTGAGCCCTGACGGGCTGCCCGAATTG +
Preference number: 6 (lower is better)
Translates to: GVCPNELAVAES*QRLSPDGLPEL
Trigger: CAATTCGGGCAGCCCGTCAGGGCTCAGCCTCTGCCAGGACTCTGCCACGGCAAGCTCATTCGGACAAACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS CCA 72 bp GGCCTGGGCCGCAGACATGCCCTGGCTCAGCTGAAGTaGAGGGGTGTACACAAAGCTCCTGGCCCAGCATCA +
Preference number: 6 (lower is better)
Translates to: GLGRRHALAQLK*RGVHKAPGPAS
Trigger: TGATGCTGGGCCAGGAGCTTTGTGTACACCCCTCCACTTCAGCTGAGCCAGGGCATGTCTGCGGCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000396175.5
CDS CCA 72 bp GCACGGAGTTGGCCAAAGTGTCGTCGTGCAGAGCTGTaGCGTCCAGCTTGGCAGGTTTCACGGGGAGGTGCC +
Preference number: 6 (lower is better)
Translates to: ARSWPKCRRAEL*RPAWQVSRGGA
Trigger: GGCACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CCAAAGTGTCGTCGTGCAGAGCTGTGGCGTCCAGCTTaGCAGGTTTCACGGGGAGGTGCCCACTGCCATCGG +
Preference number: 6 (lower is better)
Translates to: PKCRRAELWRPA*QVSRGGAHCHR
Trigger: CCGATGGCAGTGGGCACCTCCCCGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CAA 90 bp CAGGCTAGGACTGCATGGTTGCATGCCTCCGAAGGGGGCACGGAGTaGGCCAAAGTGTCGTCGTGCAGAGCTGTGGCGTCCAGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: QARTAWLHASEGGTE*AKVSSCRAVASSLA
Trigger: TGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGAGGCATGCAACCATGCAGTCCTAGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp CTGGGGAAGCCTGAGGCCGGCTCGGGTAACTTCTGCTaGCTGAGACAGTCACACGTGCTTGGGACCTCTCAC +
Preference number: 6 (lower is better)
Translates to: LGKPEAGSGNFC*LRQSHVLGTSH
Trigger: GTGAGAGGTCCCAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCCGGCCTCAGGCTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 72 bp CCTCTGGGGAAGCCTGAGGCCGGCTCGGGTAACTTCTaGTGCCTGAGACAGTCACACGTGCTTGGGACCTCT +
Preference number: 6 (lower is better)
Translates to: PLGKPEAGSGNF*CLRQSHVLGTS
Trigger: AGAGGTCCCAAGCACGTGTGACTGTCTCAGGCAGCAGAAGTTACCCGAGCCGGCCTCAGGCTTCCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 72 bp TCCGAAGGGGGCACGGAGTTGGCCAAAGTGTCGTCGTaGAGAGCTGTGGCGTCCAGCTTGGCAGGTTTCACG +
Preference number: 6 (lower is better)
Translates to: SEGGTELAKVSS*RAVASSLAGFT
Trigger: CGTGAAACCTGCCAAGCTGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp ACGCAGCTGGACAGGAGGGAGTTCATGGCCGAGGACTaGTTGGAGCCGGGGATGTTCATGGGAGAAGGGGTC +
Preference number: 6 (lower is better)
Translates to: TQLDRREFMAED*LEPGMFMGEGV
Trigger: GACCCCTTCTCCCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGTCCAGCTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CTGCATGGTTGCATGCCTCCGAAGGGGGCACGGAGTTaGCCAAAGTGTCGTCGTGCAGAGCTGTGGCGTCCA +
Preference number: 6 (lower is better)
Translates to: LHGCMPPKGARS*PKCRRAELWRP
Trigger: TGGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGAGGCATGCAACCATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp GGAGTTGGGGCTGAGTTAAGGCCCCTGCCTCGCCCGTaGGCTCAGACTCTCTGCCCTATATCTCCTCTCAGC +
Preference number: 6 (lower is better)
Translates to: GVGAELRPLPRP*AQTLCPISPLS
Trigger: GCTGAGAGGAGATATAGGGCAGAGAGTCTGAGCCCACGGGCGAGGCAGGGGCCTTAACTCAGCCCCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS CAA 72 bp ACTGCATGGTTGCATGCCTCCGAAGGGGGCACGGAGTaGGCCAAAGTGTCGTCGTGCAGAGCTGTGGCGTCC +
Preference number: 6 (lower is better)
Translates to: TAWLHASEGGTE*AKVSSCRAVAS
Trigger: GGACGCCACAGCTCTGCACGACGACACTTTGGCCAACTCCGTGCCCCCTTCGGAGGCATGCAACCATGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CAA 90 bp GTGCTGACGCAGCTGGACAGGAGGGAGTTCATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATGGGAGAAGGGGTCAGAGATCTCTGC +
Preference number: 6 (lower is better)
Translates to: VLTQLDRREFMAEDW*EPGMFMGEGVRDLC
Trigger: GCAGAGATCTCTGACCCCTTCTCCCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGTCCAGCTGCGTCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp AGCTGGACAGGAGGGAGTTCATGGCCGAGGACTGGTTaGAGCCGGGGATGTTCATGGGAGAAGGGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: SWTGGSSWPRTG*SRGCSWEKGSE
Trigger: CTCTGACCCCTTCTCCCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGTCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CAA 72 bp TGCGCCTCATGCAGCATCTCCATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGCTCGGCTGTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: CASCSISMHSAY*SSSSRSSAVSC
Trigger: GCAGCTCACAGCCGAGCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATGCTGCATGAGGCGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CAA 72 bp CAGCTGGACAGGAGGGAGTTCATGGCCGAGGACTGGTaGGAGCCGGGGATGTTCATGGGAGAAGGGGTCAGA +
Preference number: 6 (lower is better)
Translates to: QLDRREFMAEDW*EPGMFMGEGVR
Trigger: TCTGACCCCTTCTCCCATGAACATCCCCGGCTCCAACCAGTCCTCGGCCATGAACTCCCTCCTGTCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS TCA 72 bp CGGTGCTGTTGCACACATCACAGGCGTTTGTCCGAATaGGCTTGCCGTGGCAGAGTCCTGGCAGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RCCCTHHRRLSE*ACRGRVLAEAE
Trigger: CTCAGCCTCTGCCAGGACTCTGCCACGGCAAGCTCATTCGGACAAACGCCTGTGATGTGTGCAACAGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327628.10
CDS TCA 72 bp CACTTCCCAGGATGGTGCGCTGAGGTCTCTGGGTGCTaGACTGGAGTGGAGGTAGCTAGGCGTGGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: HFPGWCAEVSGC*TGVEVARRGRE
Trigger: TTCTCTCCCACGCCTAGCTACCTCCACTCCAGTTCAGCACCCAGAGACCTCAGCGCACCATCCTGGGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000396175.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS TCA 72 bp CTGGAAGCCTCGGCCTCCAATGTCTTACCTCCTCCCTaGTGTGTTCCACCTGCTCCTCCAGCAGCTCGTTCC +
Preference number: 6 (lower is better)
Translates to: LEASASNVLPPP*CVPPAPPAARS
Trigger: GGAACGAGCTGCTGGAGGAGCAGGTGGAACACATCAGGGAGGAGGTAAGACATTGGAGGCCGAGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469506.3
CDS GCA 72 bp TTAAGGCCCCTGCCTCGCCCGTGGGCTCAGACTCTCTaGCCTATATCTCCTCTCAGCTCAACGGGGCATATG +
Preference number: 6 (lower is better)
Translates to: LRPLPRPWAQTL*PISPLSSTGHM
Trigger: CATATGCCCCGTTGAGCTGAGAGGAGATATAGGGCAGAGAGTCTGAGCCCACGGGCGAGGCAGGGGCCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS GCA 72 bp CCTCGCTTATGTAGTGTTCCTCAGGGATGCCCAGGCTaGAGGCTAGGACTGCATGGTTGCATGCCTCCGAAG +
Preference number: 6 (lower is better)
Translates to: PRLCSVPQGCPG*RLGLHGCMPPK
Trigger: CTTCGGAGGCATGCAACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACTACATAAGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CCAGTGAGTGGTAGCGCCGAGACGTGGTATTGGGCATaGTTTTGTTCCGGAGGTTCTTCAGCTCCTCCTGCG +
Preference number: 6 (lower is better)
Translates to: PVSGSAETWYWA*FCSGGSSAPPA
Trigger: CGCAGGAGGAGCTGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp GTGAGCTGCCGCTGGGCATCCTTAGCAGCCCCCAGATaGTGGACAAGTTCTTCATTTTCCACTGCGCAAGCT +
Preference number: 6 (lower is better)
Translates to: VSCRWASLAAPR*WTSSSFSTAQA
Trigger: AGCTTGCGCAGTGGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAAGGATGCCCAGCGGCAGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp CTTCCACAGCCTCGCTTATGTAGTGTTCCTCAGGGATaGCCAGGCTGCAGGCTAGGACTGCATGGTTGCATG +
Preference number: 6 (lower is better)
Translates to: LPQPRLCSVPQG*PGCRLGLHGCM
Trigger: CATGCAACCATGCAGTCCTAGCCTGCAGCCTGGGCATCCCTGAGGAACACTACATAAGCGAGGCTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp AGCAAACGGACTCGGGCTCACTCTCCTCCGCAGCGCTaGTGTAGAACTGAAGCAGCTCATCCTTCATGGACA +
Preference number: 6 (lower is better)
Translates to: SKRTRAHSPPQR*CRTEAAHPSWT
Trigger: TGTCCATGAAGGATGAGCTGCTTCAGTTCTACACCAGCGCTGCGGAGGAGAGTGAGCCCGAGTCCGTTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp ACAGGCCCAGTGAGTGGTAGCGCCGAGACGTGGTATTaGGCATGGTTTTGTTCCGGAGGTTCTTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: TGPVSGSAETWY*AWFCSGGSSAP
Trigger: AGGAGCTGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS TCA 72 bp ACAGAGAACCACTACGGATGGTGCCTGGAACAGAGGTaGGAATGGCCCAAAACTCTGCCTCCGGGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: TENHYGWCLEQR*EWPKTLPPGKV
Trigger: CACCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACCTCTGTTCCAGGCACCATCCGTAGTGGTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS GCA 72 bp GGTGAGAATGGCCCAAAACTCTGCCTCCGGGAAAGGTaGCAAGTTTACAGGACTTATCGTGGTGCCCTCACC +
Preference number: 6 (lower is better)
Translates to: GENGPKLCLRER*QVYRTYRGALT
Trigger: GGTGAGGGCACCACGATAAGTCCTGTAAACTTGGCACCTTTCCCGGAGGCAGAGTTTTGGGCCATTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341421.7
ENST00000613405.4
CDS CCA 72 bp TGGGAAACAGGCCCAGTGAGTGGTAGCGCCGAGACGTaGTATTGGGCATGGTTTTGTTCCGGAGGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: WETGPVSGSAET*YWAWFCSGGSS
Trigger: TGAAGAACCTCCGGAACAAAACCATGCCCAATACCACGTCTCGGCGCTACCACTCACTGGGCCTGTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp TCTGCCCTATATCTCCTCTCAGCTCAACGGGGCATATaGCTGCTTCGTCGTCCTCCTCACATGACCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SALYLLSAQRGI*LLRRPPHMTLV
Trigger: CACCAAGGTCATGTGAGGAGGACGACGAAGCAGCCATATGCCCCGTTGAGCTGAGAGGAGATATAGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672026.1
CDS TCA 72 bp GCGGGCAGCATCTTCCGTCTTCTTGGCCAGTTCCTCTaGGATACTAGCAATCTGGACATTGGCATCCCTCAG +
Preference number: 6 (lower is better)
Translates to: AGSIFRLLGQFL*DTSNLDIGIPQ
Trigger: CTGAGGGATGCCAATGTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp TGGACTTCACAGCACCATCAACGTCAAGTAAAACGCTaGCATGCCTCCCCGCCCTTCCAGAATACTGGACAG +
Preference number: 6 (lower is better)
Translates to: WTSQHHQRQVKR*HASPPFQNTGQ
Trigger: CTGTCCAGTATTCTGGAAGGGCGGGGAGGCATGGCAGCGTTTTACTTGACGTTGATGGTGCTGTGAAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000418790.5
ENST00000449246.5
ENST00000613405.4
CDS CCA 72 bp ACTATTTGCGATAGCAGGTGTGTGATCTCCTCTTGCTaGCGGGCAGCATCTTCCGTCTTCTTGGCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: TICDSRCVISSC*RAASSVFLASS
Trigger: GGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCTGCTATCGCAAATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp AGCTGCCGCTGGGCATCCTTAGCAGCCCCCAGATGCTaGACAAGTTCTTCATTTTCCACTGCGCAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: SCRWASLAAPRC*TSSSFSTAQAF
Trigger: AAAAGCTTGCGCAGTGGAAAATGAAGAACTTGTCCAGCATCTGGGGGCTGCTAAGGATGCCCAGCGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CAA 72 bp TGCGCCTCATGCAGCATCTCCATGCACTCTGCGTACTaGTCCTCCAGCTCACGCAGAGCTTTTGCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: CASCSISMHSAY*SSSSRRAFAFF
Trigger: GAAAAAGGCAAAAGCTCTGCGTGAGCTGGAGGACAAGTACGCAGAGTGCATGGAGATGCTGCATGAGGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427771.1
CDS CAA 90 bp AGGTGTGTGATCTCCTCTTGCTGGCGGGCAGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATACTAGCAATCTGGACATTGGCATCC +
Preference number: 6 (lower is better)
Translates to: RCVISSCWRAASSVF*ASSSEILAIWTLAS
Trigger: GGATGCCAATGTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp TCAACTATTTGCGATAGCAGGTGTGTGATCTCCTCTTaGTGGCGGGCAGCATCTTCCGTCTTCTTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: STICDSRCVISS*WRAASSVFLAS
Trigger: ACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGATCACACACCTGCTATCGCAAATAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp CTCTCGGTTAGGGTCTTGTTCTTCTTCAACAACGACTaGCCGATGCGAGCGGCCAATTCTAAATCCCGCTCT +
Preference number: 6 (lower is better)
Translates to: LSVRVLFFFNND*PMRAANSKSRS
Trigger: AGAGCGGGATTTAGAATTGGCCGCTCGCATCGGCCAGTCGTTGTTGAAGAAGAACAAGACCCTAACCGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000469506.3
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp TTCCAAGAGGTCCTGGGTGTCATGCTGCCTGTGGGTTaGCTTCCTCTCTTCATCCTGGCAGTCGTATTCAAA +
Preference number: 6 (lower is better)
Translates to: FQEVLGVMLPVG*LPLFILAVVFK
Trigger: TTTGAATACGACTGCCAGGATGAAGAGAGGAAGCCAACCCACAGGCAGCATGACACCCAGGACCTCTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS CAA 72 bp ATCTCCTCTTGCTGGCGGGCAGCATCTTCCGTCTTCTaGGCCAGTTCCTCTGAGATACTAGCAATCTGGACA +
Preference number: 6 (lower is better)
Translates to: ISSCWRAASSVF*ASSSEILAIWT
Trigger: TGTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAGAAGACGGAAGATGCTGCCCGCCAGCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000427771.1
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp GTGTATGGAGCCAGTCGTCGTGGTCATAACCGTAGATaGTGTCGGCTCTTAACTTATAATGGGGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: VYGASRRGHNRR*CRLLTYNGAAA
Trigger: AGCAGCTGCCCCATTATAAGTTAAGAGCCGACACCATCTACGGTTATGACCACGACGACTGGCTCCATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp GTCTTCTTGGCCAGTTCCTCTGAGATACTAGCAATCTaGACATTGGCATCCCTCAGCTCCTTCACGCAGTCA +
Preference number: 6 (lower is better)
Translates to: VFLASSSEILAI*TLASLSSFTQS
Trigger: TGACTGCGTGAAGGAGCTGAGGGATGCCAATGTCCAGATTGCTAGTATCTCAGAGGAACTGGCCAAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327628.10
ENST00000341421.7
ENST00000396175.5
ENST00000449246.5
ENST00000484786.5
ENST00000487159.5
ENST00000613405.4
ENST00000672026.1
ENST00000673621.2
CDS CCA 72 bp TTCAATTTGCTCGGTTGTGAGGTCAATGTTGGCATCTaGAGAAATGAGAGGTGTATGGAGCCAGTCGTCGTG +
Preference number: 6 (lower is better)
Translates to: FNLLGCEVNVGI*RNERCMEPVVV
Trigger: CACGACGACTGGCTCCATACACCTCTCATTTCTCCAGATGCCAACATTGACCTCACAACCGAGCAAATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2
CDS GCA 72 bp TTGTCCTCCAGCTCACGCAGAGCTTTTGCCTTTTTCTaGAAATCAACTATTTGCGATAGCAGGTGTGTGATC +
Preference number: 6 (lower is better)
Translates to: LSSSSRRAFAFF*KSTICDSRCVI
Trigger: GATCACACACCTGCTATCGCAAATAGTTGATTTGCAGAAAAAGGCAAAAGCTCTGCGTGAGCTGGAGGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427771.1
CDS CCA 72 bp GTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAACCTCTTCCAAG +
Preference number: 6 (lower is better)
Translates to: VTASMSLYVLVI*PTLSAHKTSSK
Trigger: CTTGGAAGAGGTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341421.7
ENST00000396175.5
ENST00000469506.3
CDS CCA 72 bp GTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAACATCCGAGCAT +
Preference number: 6 (lower is better)
Translates to: VTASMSLYVLVI*PTLSAHKTSEH
Trigger: ATGCTCGGATGTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449246.5
ENST00000613405.4
CDS CCA 72 bp GTGACAGCATCTATGTCATTATATGTCTTAGTCATCTaGCCAACTCTTTCAGCACATAAAAGGAAGTATTTT +
Preference number: 6 (lower is better)
Translates to: VTASMSLYVLVI*PTLSAHKRKYF
Trigger: AAAATACTTCCTTTTATGTGCTGAAAGAGTTGGCCAGATGACTAAGACATATAATGACATAGATGCTGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327628.10
ENST00000484786.5
ENST00000487159.5
ENST00000672026.1
ENST00000673621.2