RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAFD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135148

Ensembl transcript IDs: ENST00000257604.9, ENST00000412615.7, ENST00000547063.5, ENST00000548092.5, ENST00000548277.1, ENST00000549358.5, ENST00000550051.5, ENST00000552890.5, ENST00000552896.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGTCAGCTGCACCCTTTATGTCACTGAGAGACCTGGGACCGCCATaGGACTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: SSAAPFMSLRDLGPP*DWSASHTALQKSCS
Trigger: AGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTGCAGCTGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR GCA 90 bp AAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTTCACTGCTaGCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCAC +
Preference number: 1 (lower is better)
Translates to: KREPWQPRLQLVFHC*RKVAAKAEAFLNRH
Trigger: GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR GCA 90 bp GTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTTCACTaGTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGC +
Preference number: 1 (lower is better)
Translates to: VKREPWQPRLQLVFH*CRKVAAKAEAFLNR
Trigger: GCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR CCA 90 bp CCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTaGCCTGAGCACCTTACCAGAGCGCCTCATACACACCTGGGGCCC +
Preference number: 1 (lower is better)
Translates to: PAQHIKSLVTDRHCN*PEHLTRAPHTHLGP
Trigger: GGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR GCA 90 bp AAATCTGGAAAAACTCTCCCACCCAAAGAGCCAAAGAGGTGGGCCTaGACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATG +
Preference number: 1 (lower is better)
Translates to: KSGKTLPPKEPKRWA*TAASAAVHRRQEPM
Trigger: CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGGCTCTTTGGGTGGGAGAGTTTTTCCAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR TCA 90 bp AGTCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATaGCATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTAT +
Preference number: 1 (lower is better)
Translates to: SLTGYLQPVARSSGR*HQVPPPLWGKSCQY
Trigger: ATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR TCA 90 bp GGCTGTAATGTTCCTTTGGTTGGTAGTTCTATTGTGGAAAACATCTaGTTCAAAGGCTCTCAGGGGCCTTCGCGGCAGCCTCATGGGTGG +
Preference number: 1 (lower is better)
Translates to: GCNVPLVGSSIVENI*FKGSQGPSRQPHGW
Trigger: CCACCCATGAGGCTGCCGCGAAGGCCCCTGAGAGCCTTTGAATCAGATGTTTTCCACAATAGAACTACCAACCAAAGGAACATTACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR CCA 90 bp AATCTAAAATCTGGAAAAACTCTCCCACCCAAAGAGCCAAAGAGGTaGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAA +
Preference number: 1 (lower is better)
Translates to: NLKSGKTLPPKEPKR*ACTAASAAVHRRQE
Trigger: TTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGGCTCTTTGGGTGGGAGAGTTTTTCCAGATTTTAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR GCA 90 bp CAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACCACAGTTaGCACATAGTTCCGTCCGGGCACCACAATAATCTTCATGTTCCT +
Preference number: 1 (lower is better)
Translates to: QGESSDLSQGHCDHS*HIVPSGHHNNLHVP
Trigger: AGGAACATGAAGATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR GCA 90 bp TCCCACAAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTaGGACCACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAAT +
Preference number: 1 (lower is better)
Translates to: SHKLQGESSDLSQGH*DHSCHIVPSGHHNN
Trigger: ATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR GCA 90 bp CCTCATGGGTGGGTCCAGAGCCTCAATTTGTCTGAGGAGTTGGGATaGAATCCAGATTCCATCCTGACCCCAAGATTCATCATATGCATT +
Preference number: 1 (lower is better)
Translates to: PHGWVQSLNLSEELG*NPDSILTPRFIICI
Trigger: AATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCTCTGGACCCACCCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR CCA 90 bp TCCTCCACAGGGTGTGAATTGCTCAGGCCCATCAAAGAGTCTAACTaGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCA +
Preference number: 1 (lower is better)
Translates to: SSTGCELLRPIKESN*LLAACCKKFWKMTS
Trigger: TGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR TCA 90 bp GCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTaGCCCCAAGATTCATCATATGCATTAGGAGGTATGGCAACCTCA +
Preference number: 1 (lower is better)
Translates to: ASICLRSWDAIQIPS*PQDSSYALGGMATS
Trigger: TGAGGTTGCCATACCTCCTAATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR TCA 90 bp ATAGTTCCGTCCGGGCACCACAATAATCTTCATGTTCCTTCAGTTTaGGAATGGAAAGTTCTAAATCACAGTGCTGGCAGACAGCAAGCC +
Preference number: 1 (lower is better)
Translates to: IVPSGHHNNLHVPSV*EWKVLNHSAGRQQA
Trigger: GGCTTGCTGTCTGCCAGCACTGTGATTTAGAACTTTCCATTCTCAAACTGAAGGAACATGAAGATTATTGTGGTGCCCGGACGGAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCGTCAAAAGGGAGCCCTaGCAGCCGAGGCTGCAGCTT +
Preference number: 2 (lower is better)
Translates to: GWGRAQHTCCGDREPSALVKREP*QPRLQL
Trigger: AAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGAC...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCCCTGGCAGCCGAGGCTaGAGCTTGTATTTCACTGCT +
Preference number: 2 (lower is better)
Translates to: GWGRAQHTCCGDREPSALPGSRG*SLYFTA
Trigger: AGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGG...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp TCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGCCCTCCAGAAGTCCTaGTCTGCCACACTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: SSTPLGEELPVLSEGKARALQKS*SATLEA
Trigger: AGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGC...ACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCAGAGAATCACCTTACTaGTGGCTACCAGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: GWGRAQHTCCGDREPSALRESPY*WLPGFQ
Trigger: TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCT...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCACAGCGGCAAGTGCTaGTGTGCACAGAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: TLPERLIHTWGPIECGQTHSGKC*CAQKTG
Trigger: TCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTG...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCGGCAAGTGCTGCTGTaGACAGAAGACAGGAACCGA +
Preference number: 2 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSRQVLL*TEDRNR
Trigger: TCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTACCAAAGAGGTGGGCCTaGACAGCGGCAAGTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLPKRWA*TAASAA
Trigger: AGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGG...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR TCA 90 bp ACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTCACCCTTTATGTCACTaGGAGACCTGGGACCGCCAT +
Preference number: 2 (lower is better)
Translates to: TSGSSTPLGEELPVLSEGHPLCH*ETWDRH
Trigger: ATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTG...ACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR TCA 90 bp CTCTGTCACATGGTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGGTCCTGGTGAAGAGCTGCCAGTATTaGGTGAAGGTAAGGCACGTG +
Preference number: 2 (lower is better)
Translates to: LCHMVGCSGWALVTLVLVKSCQY*VKVRHV
Trigger: CACGTGCCTTACCTTCACTCAATACTGGCAGCTCTT...CACCAGGACCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR TCA 90 bp CCACAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCGACCTGGGACCGCCATaGGACTGGTCGGCCTCACAT +
Preference number: 2 (lower is better)
Translates to: PQNSHGIMMLSSTGCELLDLGPP*DWSASH
Trigger: ATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTC...GAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR GCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCCGGCAAGTGCTGCTGTaGACAGAAGACAGGAACCGA +
Preference number: 2 (lower is better)
Translates to: KASLLTDIATGLSTLPERRQVLL*TEDRNR
Trigger: TCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCG...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGCACAGCGGCAAGTGCTaGTGTGCACAGAAGACAGGA +
Preference number: 2 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRHSGKC*CAQKTG
Trigger: TCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTG...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCAGCTTGTATTTCACTaGTGCCGAAAGGTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSQLVFH*CRKVAA
Trigger: AGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCAGCTTGTATTTCACTaGTGCCGAAAGGTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAQLVFH*CRKVAA
Trigger: AGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR CCA 90 bp AATCCCCTCTGTCACATGGTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGGTCAATCAGCAGTTCCTCTaGGTAGAGCTCCTCACAAAA +
Preference number: 2 (lower is better)
Translates to: NPLCHMVGCSGWALVTLVNQQFL*VELLTK
Trigger: TTTTGTGAGGAGCTCTACCCAGAGGAACTGCTGATT...GACCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAGGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR CAA 90 bp CAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATaGCTCAGGCCCATCAAAGAGTCTAACTGGTTACTTGCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: QNSHGIMMLSSTGCE*LRPIKESNWLLAAC
Trigger: ACAGGCTGCAAGTAACCAGTTAGACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR TCA 90 bp AGCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGACCCCACCACAAACTTCAGGGTaGGTCTTCAGATCTTTCACA +
Preference number: 2 (lower is better)
Translates to: SLNLSEELGCNPDSILTPPQTSG*VFRSFT
Trigger: TGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGG...TGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR-3UTR GCA 90 bp AATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGACCCCAAGATTCAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGC +
Preference number: 2 (lower is better)
Translates to: NLSEELGCNPDSILTPRFSSKSQ*WQTASR
Trigger: GCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACT...GAATCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGGAATCACCTTACTGGTaGCTACCAGGTTTCCAAAAT +
Preference number: 2 (lower is better)
Translates to: LQLNTSKASLLTDIATGLESPYW*LPGFQN
Trigger: ATTTTGGAAACCTGGTAGCCACCAGTAAGGTGATTC...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR TCA 72 bp GCACCCTTTATGTCACTGAGAGACCTGGGACCGCCATaGGACTGGTCGGCCTCACATACGGCCCTCCAGAAG +
Preference number: 3 (lower is better)
Translates to: APFMSLRDLGPP*DWSASHTALQK
Trigger: CTTCTGGAGGGCCGTATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR GCA 72 bp GACTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTaGTCTGCCACACTGGAGGCTTGGCCTTCATTTTGC +
Preference number: 3 (lower is better)
Translates to: DWSASHTALQKS*SATLEAWPSFC
Trigger: GCAAAATGAAGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR CCA 72 bp AAAGGCTCTCAGGGGCCTTCGCGGCAGCCTCATGGGTaGGTCCAGAGCCTCAATTTGTCTGAGGAGTTGGGA +
Preference number: 3 (lower is better)
Translates to: KGSQGPSRQPHG*VQSLNLSEELG
Trigger: TCCCAACTCCTCAGACAAATTGAGGCTCTGGACCCACCCATGAGGCTGCCGCGAAGGCCCCTGAGAGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR GCA 72 bp CCCTGGCAGCCGAGGCTGCAGCTTGTATTTCACTGCTaGCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTC +
Preference number: 3 (lower is better)
Translates to: PWQPRLQLVFHC*RKVAAKAEAFL
Trigger: GAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR CCA 72 bp AGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTaGACAGACGCAGTACACGGAGAGGTTGCCCAAAAG +
Preference number: 3 (lower is better)
Translates to: RAPHTHLGPNRV*TDAVHGEVAQK
Trigger: CTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR GCA 72 bp AAAACTCTCCCACCCAAAGAGCCAAAGAGGTGGGCCTaGACAGCGGCAAGTGCTGCTGTGCACAGAAGACAG +
Preference number: 3 (lower is better)
Translates to: KTLPPKEPKRWA*TAASAAVHRRQ
Trigger: CTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGGCTCTTTGGGTGGGAGAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR CCA 72 bp AGGAATCCCCTCTGTCACATGGTTGGTTGCAGTGGCTaGGCGTTGGTCACACTGGTCCTGGTGATGGAACAG +
Preference number: 3 (lower is better)
Translates to: RNPLCHMVGCSG*ALVTLVLVMEQ
Trigger: CTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAGGGGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR TCA 72 bp GTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTaGGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTG +
Preference number: 3 (lower is better)
Translates to: VPPPLWGKSCQY*VKVRHVKGYSL
Trigger: CAAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR-3UTR CAA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTAGCCGAGGCTGCAGCTaGTATTTCACTGCTGCCGAA +
Preference number: 3 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGSRGCS*YFTAAE
Trigger: TTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCT...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR CAA 90 bp ACTGGTGGCTACCAGGTTTCCAAAATCTTCCCCTCCTTCCACTGGGACCACACAAGCCGAGGCTGCAGCTaGTATTTCACTGCTGCCGAA +
Preference number: 3 (lower is better)
Translates to: TGGYQVSKIFPSFHWDHTSRGCS*YFTAAE
Trigger: TTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCT...TGTGTGGTCCCAGTGGAAGGAGGGGAAGATTTTGGAAACCTGGTAGCCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR CAA 90 bp CTGGGCGTTGGTCACACTGGTCCTGGTGATGGAACAGCACCTCCTCTTCCAGCTGTGAAGGGTTACAGCTaGTCTGATGGTCAATCAGCA +
Preference number: 3 (lower is better)
Translates to: LGVGHTGPGDGTAPPLPAVKGYS*SDGQSA
Trigger: TGCTGATTGACCATCAGACAAGCTGTAACCCTTCAC...AGCTGGAAGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR TCA 72 bp GGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATaGCATCAGGTTCCTCCACCCCTCTGGGGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GYLQPVARSSGR*HQVPPPLWGKS
Trigger: GCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR GCA 72 bp CTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTaGGACCACAGTTGCCACATAGTTCCGTCCGGGCAC +
Preference number: 3 (lower is better)
Translates to: LQGESSDLSQGH*DHSCHIVPSGH
Trigger: GTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR-3UTR CAA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGCAGTACACGGAGAGGTaGCCCAAAAGCCCCCAAATT +
Preference number: 3 (lower is better)
Translates to: LQLNTSKASLLTDIATGLQYTER*PKSPQI
Trigger: AATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTG...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR-3UTR CAA 90 bp TCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCAGGCCCATCGAAGAGCTGCCAGTATaGAGTGAAGGTAAGGCACGT +
Preference number: 3 (lower is better)
Translates to: SHGIMMLSSTGCELLRPIEELPV*SEGKAR
Trigger: ACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTC...GATGGGCCTGAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR CCA 72 bp CACATCAAAAGCCTCGTTACTGACAGACATTGCAACTaGCCTGAGCACCTTACCAGAGCGCCTCATACACAC +
Preference number: 3 (lower is better)
Translates to: HIKSLVTDRHCN*PEHLTRAPHTH
Trigger: GTGTGTATGAGGCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR CCA 72 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTaGAAGATGACATCAGGTTCCTCCACCCCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: SNWLLAACCKKF*KMTSGSSTPLG
Trigger: CCCCAGAGGGGTGGAGGAACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR TCA 72 bp GTTCCTTTGGTTGGTAGTTCTATTGTGGAAAACATCTaGTTCAAAGGCTCTCAGGGGCCTTCGCGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: VPLVGSSIVENI*FKGSQGPSRQP
Trigger: AGGCTGCCGCGAAGGCCCCTGAGAGCCTTTGAATCAGATGTTTTCCACAATAGAACTACCAACCAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR CCA 72 bp GGGTGTGAATTGCTCAGGCCCATCAAAGAGTCTAACTaGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAG +
Preference number: 3 (lower is better)
Translates to: GCELLRPIKESN*LLAACCKKFWK
Trigger: CTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACTCTTTGATGGGCCTGAGCAATTCACACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR GCA 72 bp TCTTCAGATCTTTCACAAGGACATTGCGACCACAGTTaGCACATAGTTCCGTCCGGGCACCACAATAATCTT +
Preference number: 3 (lower is better)
Translates to: SSDLSQGHCDHS*HIVPSGHHNNL
Trigger: AAGATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR TCA 72 bp TGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTaGCCCCAAGATTCATCATATGCATTAGGAGGTATG +
Preference number: 3 (lower is better)
Translates to: CLRSWDAIQIPS*PQDSSYALGGM
Trigger: CATACCTCCTAATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR CCA 72 bp GTTACAGCTTGTCTGATGGTCAATCAGCAGTTCCTCTaGGTAGAGCTCCTCACAAAATTCACAAGGCAACAT +
Preference number: 3 (lower is better)
Translates to: VTACLMVNQQFL*VELLTKFTRQH
Trigger: ATGTTGCCTTGTGAATTTTGTGAGGAGCTCTACCCAGAGGAACTGCTGATTGACCATCAGACAAGCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
3UTR GCA 72 bp AATCCAGATTCCATCCTGACCCCAAGATTCATCATATaGATTAGGAGGTATGGCAACCTCATTTCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: NPDSILTPRFII*IRRYGNLISLF
Trigger: GAAAAGAGAAATGAGGTTGCCATACCTCCTAATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCGCGGCCTCCTCCAGGTaGCTGAGATGCCGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCAASSR*LRCRRA
Trigger: CGCGCGGCGGCATCTCAGGCACCTGGAGGAGGCCGC...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR GCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCTGTCACATGGTTGGTTaGAGTGGCTGGGCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALCHMVG*SGWALV
Trigger: GACCAACGCCCAGCCACTGCAACCAACCATGTGACA...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCCATGGTTGGTTGCAGTaGCTGGGCGTTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALHGWLQ*LGVGHT
Trigger: AGTGTGACCAACGCCCAGCCACTGCAACCAACCATG...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCCCTCTGTCACATGGTTaGTTGCAGTGGCTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALPLSHG*LQWLGV
Trigger: AACGCCCAGCCACTGCAACCAACCATGTGACAGAGG...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCCATTTGCAGGTCACCTaGCAGTGTTCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALHLQVT*QCSAAM
Trigger: CATGGCTGCAGAACACTGTCAGGTGACCTGCAAATG...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCGTTCCTCCACCCCTCTaGGGGAAGAGCTGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LVGLTYGPPEVLLCHTGGVPPPL*GKSCQY
Trigger: ATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAAC...GCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CTGGGCGTTGGTCACACTGGTCCTGGTGATGGAACAGCACCTCCTCTTCCAGCTGACCTGGGACCGCCATaGGACTGGTCGGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: LGVGHTGPGDGTAPPLPADLGPP*DWSASH
Trigger: ATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTC...AGCTGGAAGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCGATGTCCTGGCTGTCTaGGTTGCTGAGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCDVLAV*VAELRH
Trigger: GTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATC...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTCCGTATCTCCCTaGAGGCCCAGGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCSSVSP*RPRGER
Trigger: TCTTTCTCCCCTGGGCCTTCAGGGAGATACGGAGCT...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCCCACAGGGTGTGAATTaGTCAGGCCCATCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALPQGVN*SGPSKS
Trigger: ACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGG...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCGGAAGGCTTTGCCTTTaGAGTTCTGCTGCGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALGRLCL*SSAAVV
Trigger: AACTACCGCAGCAGAACTGCAAAGGCAAAGCCTTCC...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGCCAAAGAGGTGGGCCTaGACAGCGGCAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMPKRWA*TAASAA
Trigger: AGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGG...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GAGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGCTGGCACCCAGGTCTaGGGCCTGATGTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: EVGLHSGKCCCAQKTGTDAGTQV*GLMLIS
Trigger: CGAGATCAACATCAGGCCCCAGACCTGGGTGCCAGC...ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGAAGGCGCCGGTTCCCTaGGGAGAAAGCGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRKAPVP*GESAAS
Trigger: GGAGGCCGCGCTTTCTCCTCAGGGAACCGGCGCCTT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR TCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGAGGAGGGCGAATCACTaGAACGTGCCCAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMRRANH*NVPRGY
Trigger: ATAGCCCCTGGGCACGTTTCAGTGATTCGCCCTCCT...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTATGGCAGCTGCAGGGGTaGCCCGGGAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLWQLQG*PGNSCH
Trigger: GTGGCAGGAATTCCCGGGTCACCCCTGCAGCTGCCA...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCCACAGCGGCAAGTGCTaGTGTGCACAGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCHSGKC*CAQKTG
Trigger: TCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTG...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GTCACTGAGAGACCTGGGACCGCCATGAGACTGGTCGGCCTCACATACGGCCCTATCCCCTCTGTCACATaGTTGGTTGCAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VTERPGTAMRLVGLTYGPIPSVT*LVAVAG
Trigger: CCCAGCCACTGCAACCAACCATGTGACAGAGGGGAT...AGGGCCGTATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTCTCTCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCGTGCCCAGGGGCTATaGCCCCATTCTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSRAQGL*PHSGCL
Trigger: GAGACAGCCAGAATGGGGCCATAGCCCCTGGGCACG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GAGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATTTCCCCTCCTTCCACTaGGACCACACAGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: EVGLHSGKCCCAQKTGTDFPSFH*DHTAPR
Trigger: CCTTGGTGCTGTGTGGTCCCAGTGGAAGGAGGGGAA...ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCCAACATACCTGCTGTaGGGACAGGGAGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTPTYLL*GQGALS
Trigger: GCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGG...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGACCTGGGACCGCCATaGGACTGGTCGGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLDLGPP*DWSASH
Trigger: ATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCCCTGGGCAGCTCTGGTaGGGTCTCTTGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVPGQLW*GLLRLG
Trigger: TCCCAGCCTCAAGAGACCTCACCAGAGCTGCCCAGG...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCGGATCTCCAGCCGCGTaGCGCCGCTACACCTCACCA +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERGSPAA*RRYTSP
Trigger: TGGTGAGGTGTAGCGGCGGCACGCGGCTGGAGATCC...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTGCCCTCCAGAAGTCCTaGTCTGCCACACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAALQKS*SATLEA
Trigger: AGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGC...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTGTCACATGGTTGGTTaGAGTGGCTGGGCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMCHMVG*SGWALV
Trigger: GACCAACGCCCAGCCACTGCAACCAACCATGTGACA...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCAGAGCCCAACATACCTaGTGTGGGGACAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSRAQHT*CGDREP
Trigger: GGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCT...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCGGCAGCCTCATGGGTaGGTCCAGAGCCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTRQPHG*VQSLNL
Trigger: CAAATTGAGGCTCTGGACCCACCCATGAGGCTGCCG...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCAATCAGCAGTTCCTCTaGGTAGAGCTCCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALNQQFL*VELLTK
Trigger: TTTTGTGAGGAGCTCTACCCAGAGGAACTGCTGATT...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGGTTCCTCCACCCCTCTaGGGGAAGAGCTGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTVPPPL*GKSCQY
Trigger: ATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAAC...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGGAAGACAGGTCTCCCTaGTGTCTGACACGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTEDRSP*CLTRLL
Trigger: CAGGAGGCGTGTCAGACACCAGGGAGACCTGTCTTC...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGTTCCCCTCCTTCCACTaGGACCACACAGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LGPNRVWTDAVHGEVAQKFPSFH*DHTAPR
Trigger: CCTTGGTGCTGTGTGGTCCCAGTGGAAGGAGGGGAA...CTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGCGCCTCATACACACCTaGGGCCCAATCGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGERLIHT*GPIECG
Trigger: TCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCG...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCCAACATACCTGCTGTaGGGACAGGGAGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSPTYLL*GQGALS
Trigger: GCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCATACCAATGTTCCTTTaGCAGTGGATCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALIPMFL*QWISWM
Trigger: CATCCATGAGATCCACTGTCAAAGGAACATTGGTAT...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGACCTGGGACCGCCATaGGACTGGTCGGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRDLGPP*DWSASH
Trigger: ATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp GCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCTTGGCCTATTCACAAGGCAACATaGTCTCGTCAGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: ASHTALQKSCSATLEAWPIHKAT*SRQLHP
Trigger: AGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAAT...AGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGTCACACTGGTCCTGGTaGTGGAACAGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGESHWSW*WNSTSS
Trigger: AGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGA...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTGGCTGTCTGAGTTGCTaGGCTTCGGCACACAAGGAG +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAGCLSC*ASAHKE
Trigger: CTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCC...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCGCTTGGCCTTCATTTTaGAGACTTAGGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: LVGLTYGPPEVLLCHTGGAWPSF*RLRANM
Trigger: CATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGC...GCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACGCCCTCCAGAAGTCCTaGTCTGCCACACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHALQKS*SATLEA
Trigger: AGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGC...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACGCGGTAGTTGGCAGCTaGAGGGGTGACCCGGGAATT +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHAVVGS*RGDPGI
Trigger: AATTCCCGGGTCACCCCTGCAGCTGCCAACTACCGC...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTTGCCTTTGCAGTTCTaGTGCGGTAGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMLPLQF*CGSWQL
Trigger: CAGCTGCCAACTACCGCAGCAGAACTGCAAAGGCAA...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCGCCCGGGACGCGGTaGTCACAGCGGCGCTGCGAA +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLPPGTR*SQRRCE
Trigger: TTCGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR CCA 90 bp GGCTGGGGCAGAGCCCAACATACCTGCTGTGGGGACAGGGAGCCCTCAGCCCTCATTTGTCTGAGGAGTTaGGATGCAATCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: GWGRAQHTCCGDREPSALICLRS*DAIQIP
Trigger: TGGAATCTGGATTGCATCCCAACTCCTCAGACAAAT...GAGGGCTGAGGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCTGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCGGCAGCCTCATGGGTaGGTCCAGAGCCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSRQPHG*VQSLNL
Trigger: CAAATTGAGGCTCTGGACCCACCCATGAGGCTGCCG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTTCGCGGCAGCCTCATaGGTGGGTCCAGAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVFAAAS*VGPEPQ
Trigger: TTGAGGCTCTGGACCCACCCATGAGGCTGCCGCGAA...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTGGGCGTTGGTCACACTGGTCCTGGTGATGGAACAGCACCTCCTCTTCCAGCTCTTCACCACCCTCTTTaGGGGGCTGTTGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LGVGHTGPGDGTAPPLPALHHPL*GAVGLY
Trigger: ATAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAG...AGCTGGAAGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGCATGGTTGGTTGCAGTaGCTGGGCGTTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEHGWLQ*LGVGHT
Trigger: AGTGTGACCAACGCCCAGCCACTGCAACCAACCATG...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGCCTCTGTCACATGGTTaGTTGCAGTGGCTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEPLSHG*LQWLGV
Trigger: AACGCCCAGCCACTGCAACCAACCATGTGACAGAGG...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGCACACAAGGAGAGCTaGGCTGGCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRAHKES*AGTQVW
Trigger: CCAGACCTGGGTGCCAGCCCAGCTCTCCTTGTGTGC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGCTATGGCCCCATTCTaGCTGTCTCGATTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLAMAPF*LSRFRP
Trigger: GGGGCGGAATCGAGACAGCCAGAATGGGGCCATAGC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGAAAGAGCCAAAGAGGTaGGCCTGCACAGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEKEPKR*ACTAAS
Trigger: ACTTGCCGCTGTGCAGGCCCACCTCTTTGGCTCTTT...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACGTCAAAAGGGAGCCCTaGCAGCCGAGGCTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHVKREP*QPRLQL
Trigger: AAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGAC...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCGACAGACATTGCAACTaGCCTGAGCACCTTACCAGA +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCDRHCN*PEHLTR
Trigger: TCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTC...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp GTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGGTCCTGGTGATGGAACAGCACGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: VGCSGWALVTLVLVMEQHGETLS*HTSCRH
Trigger: GTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCC...GTGCTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAGCCACTGCAACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCAAGCGGAAGGCCACCTaGGTTTTCCACAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVKRKAT*VFHSTS
Trigger: GCTGGTGCTGTGGAAAACTCAGGTGGCCTTCCGCTT...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR TCA 90 bp CAGCAAGCCGCAAAGGGCACTCAGTCTCCTTGTGATCCGCCCGCCTCAGCCTCCCCACAAACTTCAGGGTaGGTCTTCAGATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: QQAAKGTQSPCDPPASASPQTSG*VFRSFT
Trigger: TGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGG...GGAGGCTGAGGCGGGCGGATCACAAGGAGACTGAGTGCCCTTTGCGGCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTACATTGCAACTGGCCTaGGCACCTTACCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: VATISQKGALAAEAAACITLQLA*APYQSA
Trigger: GGCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGT...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTACCCCTCCCTTGGGATaGTGGACCCTTCCTAAACTG +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAATPPLG*WTLPKL
Trigger: CAGTTTAGGAAGGGTCCAGCATCCCAAGGGAGGGGT...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR GCA 90 bp GAGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: EVGLHSGKCCCAQKTGTDSSKSQ*WQTASR
Trigger: GCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACT...ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ACTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCATGAAGTCCAAGTTTaGACTCTCTTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: TGRPHIRPSRSPALPHWRHEVQV*TLFTTL
Trigger: GAGGGTGGTGAAGAGAGTGCAAACTTGGACTTCATG...CCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp ATGACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGCCCTCCAGAAGTCCTaGTCTGCCACACTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MTSGSSTPLGEELPVLSEALQKS*SATLEA
Trigger: AGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGC...TTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp GTCACTGAGAGACCTGGGACCGCCATGAGACTGGTCGGCCTCACATACGGCCCTCATGATCTCGTCAGCTaGACCCTTTATGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: VTERPGTAMRLVGLTYGPHDLVS*TLYVTE
Trigger: CTCAGTGACATAAAGGGTGCAGCTGACGAGATCATG...AGGGCCGTATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTCTCTCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGCCACAGGGTGTGAATTaGTCAGGCCCATCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMPQGVN*SGPSKS
Trigger: ACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGG...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACCGAATCACTGAAACGTaGCCAGGGGCTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHRITET*PGAMAP
Trigger: TGGGGCCATAGCCCCTGGGCACGTTTCAGTGATTCG...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTGCGGTAGTTGGCAGCTaGAGGGGTGACCCGGGAATT +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGAVVGS*RGDPGI
Trigger: AATTCCCGGGTCACCCCTGCAGCTGCCAACTACCGC...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCCAGCTTGTATTTCACTaGTGCCGAAAGGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCQLVFH*CRKVAA
Trigger: AGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTG...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCCTGGCAGCCGAGGCTaGAGCTTGTATTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAPGSRG*SLYFTA
Trigger: AGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTGTTGGTTGCAGTGGCTaGGCGTTGGTCACACTGGTC +
Preference number: 4 (lower is better)
Translates to: TSGSSTPLGEELPVLSEGVGCSG*ALVTLV
Trigger: GACCAGTGTGACCAACGCCCAGCCACTGCAACCAAC...ACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGCTGGCACCCAGGTCTaGGGCCTGATGTTGATCTCG +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLAGTQV*GLMLIS
Trigger: CGAGATCAACATCAGGCCCCAGACCTGGGTGCCAGC...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTTCTCGATTCCGCCCCTaGATGTCCTGGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VATISQKGALAAEAAACISRFRP*MSWLSE
Trigger: CTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGA...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGCTATGGCCCCATTCTaGCTGTCTCGATTCCGCCCC +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLAMAPF*LSRFRP
Trigger: GGGGCGGAATCGAGACAGCCAGAATGGGGCCATAGC...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSGETLS*HTSCRH
Trigger: GTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCC...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTGGCAGACAGCAAGCCGCAAAGGGCACTCAGTCTCCTTGTGATCCGCCCGCCTATTGTGGAAAACATCTaGTTCAAAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LADSKPQRALSLLVIRPPIVENI*FKGSQG
Trigger: CCCCTGAGAGCCTTTGAATCAGATGTTTTCCACAAT...AGGCGGGCGGATCACAAGGAGACTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGGACTTAGGGCCAACATaGAGTCCAAGTTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMDLGPT*SPSLHS
Trigger: AGAGTGCAAACTTGGACTTCATGTTGGCCCTAAGTC...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGAAGAGCTGCCAGTATTaGGTGAAGGTAAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTKSCQY*VKVRHV
Trigger: CACGTGCCTTACCTTCACTCAATACTGGCAGCTCTT...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp ACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTCTCCTCCACAGGGTGTaGATTGCTCAGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: TSGSSTPLGEELPVLSEGLLHRV*IAQAHQ
Trigger: TTGATGGGCCTGAGCAATTCACACCCTGTGGAGGAG...ACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCTGGTGAGGTCTCTTaGGGCTGGGAATCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSSGEVS*GWESSL
Trigger: TAGACTGGATTCCCAGCCTCAAGAGACCTCACCAGA...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCGGCTGTCTGAGTTGCTaGGCTTCGGCACACAAGGAG +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERGCLSC*ASAHKE
Trigger: CTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCC...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAAGGAGGGCGAATCACTaGAACGTGCCCAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLRRANH*NVPRGY
Trigger: ATAGCCCCTGGGCACGTTTCAGTGATTCGCCCTCCT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAAGCTCCGTATCTCCCTaGAGGCCCAGGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLSSVSP*RPRGER
Trigger: TCTTTCTCCCCTGGGCCTTCAGGGAGATACGGAGCT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTTGGCAGCTGCAGGGGTaGCCCGGGAATTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLWQLQG*PGNSCH
Trigger: GTGGCAGGAATTCCCGGGTCACCCCTGCAGCTGCCA...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTATCCAGGTGCCTGAGATaGCGCCGCGCGGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLSRCLR*RRAGIL
Trigger: GAGGATGCCCGCGCGGCGGCATCTCAGGCACCTGGA...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR GCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTATGGTCACAGCGGCGCTaGGAACGACGCCCGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLWSQRR*ERRPLP
Trigger: GGGAAGCGGGCGTCGTTCGCAGCGCCGCTGTGACCA...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR GCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGCACCTGACAGTGTTCTaGAGCCATGTGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEHLTVF*SHVSLH
Trigger: ATGGAGACTCACATGGCTGCAGAACACTGTCAGGTG...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAACCAAAGAGGTGGGCCTaGACAGCGGCAAGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQPKRWA*TAASAA
Trigger: AGCAGCACTTGCCGCTGTGCAGGCCCACCTCTTTGG...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTACCTGGCAGCCGAGGCTaGAGCTTGTATTTCACTGCT +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLPGSRG*SLYFTA
Trigger: AGCAGTGAAATACAAGCTGCAGCCTCGGCTGCCAGG...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp GAGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTTACTGACAGACATTaGAACTGGCCTGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: EVGLHSGKCCCAQKTGTDVTDRH*NWPEHL
Trigger: AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAAC...ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCAGAGCCCAACATACCTaGTGTGGGGACAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTRAQHT*CGDREP
Trigger: GGGCTCCCTGTCCCCACAGCAGGTATGTTGGGCTCT...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CAGCAAGCCGCAAAGGGCACTCAGTCTCCTTGTGATCCGCCCGCCTCAGCCTCCTCTCCATGTCAGATTTaGGAAATGGTTCCTTACAGG +
Preference number: 4 (lower is better)
Translates to: QQAAKGTQSPCDPPASASSPCQI*EMVPYR
Trigger: CCTGTAAGGAACCATTTCCCAAATCTGACATGGAGA...GGAGGCTGAGGCGGGCGGATCACAAGGAGACTGAGTGCCCTTTGCGGCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CCA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCTTCGCGGCAGCCTCATaGGTGGGTCCAGAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTFAAAS*VGPEPQ
Trigger: TTGAGGCTCTGGACCCACCCATGAGGCTGCCGCGAA...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACCTTCACCACCCTCTTTaGGGGGCTGTTGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHLHHPL*GAVGLY
Trigger: ATAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAG...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGAATCAGCAGTTCCTCTaGGTAGAGCTCCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: TGRPHIRPSRSPALPHWRNQQFL*VELLTK
Trigger: TTTTGTGAGGAGCTCTACCCAGAGGAACTGCTGATT...CCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGTTCCTCCACCCCTCTaGGGGAAGAGCTGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRVPPPL*GKSCQY
Trigger: ATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAAC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACTGGTGGCTACCAGGTTTCCAAAATCTTCCCCTCCTTCCACTGGGACCACACAGTTGGTTGCAGTGGCTaGGCGTTGGTCACACTGGTC +
Preference number: 4 (lower is better)
Translates to: TGGYQVSKIFPSFHWDHTVGCSG*ALVTLV
Trigger: GACCAGTGTGACCAACGCCCAGCCACTGCAACCAAC...TGTGTGGTCCCAGTGGAAGGAGGGGAAGATTTTGGAAACCTGGTAGCCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCGGGCCCAATCGAGTGTaGACAGACGCAGTACACGGA +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERGPNRV*TDAVHG
Trigger: TCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCC...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: VATISQKGALAAEAAACIGETLS*HTSCRH
Trigger: GTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCC...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCCGAGAGGAGAAACGCTaGGTTGACACACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVREEKR*VDTLAA
Trigger: TGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCG...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGATTGTGGAAAACATCTaGTTCAAAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMIVENI*FKGSQG
Trigger: CCCCTGAGAGCCTTTGAATCAGATGTTTTCCACAAT...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCCACCCTTTATGTCACTaGGAGACCTGGGACCGCCAT +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERHPLCH*ETWDRH
Trigger: ATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTG...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTAAGAGCTGCCAGTATTaGGTGAAGGTAAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAKSCQY*VKVRHV
Trigger: CACGTGCCTTACCTTCACTCAATACTGGCAGCTCTT...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTACTCCTCCACAGGGTGTaGATTGCTCAGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLLLHRV*IAQAHQ
Trigger: TTGATGGGCCTGAGCAATTCACACCCTGTGGAGGAG...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCCTGGGCAGCTCTGGTaGGGTCTCTTGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLPGQLW*GLLRLG
Trigger: TCCCAGCCTCAAGAGACCTCACCAGAGCTGCCCAGG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCGATGTCCTGGCTGTCTaGGTTGCTGAGCTTCGGCAC +
Preference number: 4 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTDVLAV*VAELRH
Trigger: GTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATC...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AATCCCCTCTGTCACATGGTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGGTCCACCTGACAGTGTTCTaGAGCCATGTGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NPLCHMVGCSGWALVTLVHLTVF*SHVSLH
Trigger: ATGGAGACTCACATGGCTGCAGAACACTGTCAGGTG...GACCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTCATTGCGACCACAGTTaGCACATAGTTCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGHCDHS*HIVPSG
Trigger: CCCGGACGGAACTATGTGGCAACTGTGGTCGCAATG...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ATGACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAACATTGCGACCACAGTTaGCACATAGTTCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: MTSGSSTPLGEELPVLSEHCDHS*HIVPSG
Trigger: CCCGGACGGAACTATGTGGCAACTGTGGTCGCAATG...TTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGCTTGGCCTTCATTTTaGAGACTTAGGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEAWPSF*RLRANM
Trigger: CATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGC...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTCCTTTGCAGTTCTGCTaGGGTAGTTGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGPLQFC*GSWQLQ
Trigger: CTGCAGCTGCCAACTACCGCAGCAGAACTGCAAAGG...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCGGAAGGCTTTGCCTTTaGAGTTCTGCTGCGGTAGTT +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSGRLCL*SSAAVV
Trigger: AACTACCGCAGCAGAACTGCAAAGGCAAAGCCTTCC...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGAGTACACGGAGAGGTTaGCCAAAAGCCCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: LGPNRVWTDAVHGEVAQKSTRRG*PKAPKF
Trigger: AAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACT...CTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACTGGTGGCTACCAGGTTTCCAAAATCTTCCCCTCCTTCCACTGGGACCACACACCTCCCTTGGGATGCTaGACCCTTCCTAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: TGGYQVSKIFPSFHWDHTPPLGC*TLPKLE
Trigger: CTCCAGTTTAGGAAGGGTCCAGCATCCCAAGGGAGG...TGTGTGGTCCCAGTGGAAGGAGGGGAAGATTTTGGAAACCTGGTAGCCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR CCA 90 bp GCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCTTGGCCTTCTCCATGTCAGATTTaGGAAATGGTTCCTTACAGG +
Preference number: 4 (lower is better)
Translates to: ASHTALQKSCSATLEAWPSPCQI*EMVPYR
Trigger: CCTGTAAGGAACCATTTCCCAAATCTGACATGGAGA...AGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTATCCCCTCTGTCACATaGTTGGTTGCAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGIPSVT*LVAVAG
Trigger: CCCAGCCACTGCAACCAACCATGTGACAGAGGGGAT...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGCGCCCCTGGATGTCCTaGCTGTCTGAGTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLRPWMS*LSELLS
Trigger: GCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCG...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACCGTGCCCAGGGGCTATaGCCCCATTCTGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNRAQGL*PHSGCL
Trigger: GAGACAGCCAGAATGGGGCCATAGCCCCTGGGCACG...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCGGGCCCAATCGAGTGTaGACAGACGCAGTACACGGA +
Preference number: 4 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTGPNRV*TDAVHG
Trigger: TCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCC...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGCCACAAACTTCAGGGTaGGTCTTCAGATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEPQTSG*VFRSFT
Trigger: TGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGG...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGATCCAGATTCCATCCTaGCCCCAAGATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMIQIPS*PQDSSY
Trigger: ATATGATGAATCTTGGGGTCAGGATGGAATCTGGAT...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGACATTGCAACTGGCCTaGGCACCTTACCAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLTLQLA*APYQSA
Trigger: GGCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGT...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTGGGCGTTGGTCACACTGGTCCTGGTGATGGAACAGCACCTCCTCTTCCAGCTCACTCAGTCTCCTCATaGTTCTTTAACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGVGHTGPGDGTAPPLPAHSVSS*FFNSLF
Trigger: GAAGAGGCTGTTAAAGAAGCATGAGGAGACTGAGTG...AGCTGGAAGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGACCAACGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCTGAGGAGTTGGGATaGAATCCAGATTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSSEELG*NPDSIL
Trigger: CAGGATGGAATCTGGATTGCATCCCAACTCCTCAGA...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCATGAAGTCCAAGTTTaGACTCTCTTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAHEVQV*TLFTTL
Trigger: GAGGGTGGTGAAGAGAGTGCAAACTTGGACTTCATG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGTTGCCTTTGCAGTTCTaGTGCGGTAGTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRLPLQF*CGSWQL
Trigger: CAGCTGCCAACTACCGCAGCAGAACTGCAAAGGCAA...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTATCCCCAGCTCCCTGTTaGTTGGAAGGCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLSPAPC*LEGFAF
Trigger: AAAGGCAAAGCCTTCCAAGCAACAGGGAGCTGGGGA...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGTCCCCAGCTCCCTGTTaGTTGGAAGGCTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRSPAPC*LEGFAF
Trigger: AAAGGCAAAGCCTTCCAAGCAACAGGGAGCTGGGGA...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAACACAGCGGCAAGTGCTaGTGTGCACAGAAGACAGGA +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQHSGKC*CAQKTG
Trigger: TCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTG...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGGCAGTGATGCCAAATaGCAAGGAAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGEGSDAK*QGSSLK
Trigger: TTTTAAGCTGCTTCCTTGGCATTTGGCATCACTGCC...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAAGGACAAAAGATCCATaGTCCCCCGGGAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLRTKDP*SPGNRR
Trigger: CCTTCTGTTCCCGGGGGAGCATGGATCTTTTGTCCT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGAGGACAAAAGATCCATaGTCCCCCGGGAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRRTKDP*SPGNRR
Trigger: CCTTCTGTTCCCGGGGGAGCATGGATCTTTTGTCCT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTCTCCATGTCAGATTTaGGAAATGGTTCCTTACAGG +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMSPCQI*EMVPYR
Trigger: CCTGTAAGGAACCATTTCCCAAATCTGACATGGAGA...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTGTTGCAAGAAGTTCTaGAAGATGACATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RWACTAASAAVHRRQEPMCCKKF*KMTSGS
Trigger: GGAACCTGATGTCATCTTCCAGAACTTCTTGCAACA...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGGAAGACAGGTCTCCCTaGTGTCTGACACGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLEDRSP*CLTRLL
Trigger: CAGGAGGCGTGTCAGACACCAGGGAGACCTGTCTTC...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTAGCACACAAGGAGAGCTaGGCTGGCACCCAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLAHKES*AGTQVW
Trigger: CCAGACCTGGGTGCCAGCCCAGCTCTCCTTGTGTGC...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCGCCCCTGGATGTCCTaGCTGTCTGAGTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLRPWMS*LSELLS
Trigger: GCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGTCTCGATTCCGCCCCTaGATGTCCTGGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLSRFRP*MSWLSE
Trigger: CTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGA...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAAAAAGAGCCAAAGAGGTaGGCCTGCACAGCGGCAAGT +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQKEPKR*ACTAAS
Trigger: ACTTGCCGCTGTGCAGGCCCACCTCTTTGGCTCTTT...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGACAGACATTGCAACTaGCCTGAGCACCTTACCAGA +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLDRHCN*PEHLTR
Trigger: TCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
3UTR CAA 72 bp CATGGGTGGGTCCAGAGCCTCAATTTGTCTGAGGAGTaGGGATGCAATCCAGATTCCATCCTGACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HGWVQSLNLSEE*GCNPDSILTPR
Trigger: TCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCTCTGGACCCACCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp CAAGGACATTGCGACCACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAATGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: QGHCDHSCHIVPSGHHNNGETLS*HTSCRH
Trigger: GTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCC...ATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp CTCTGTCACATGGTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGGTCCTGGTGATACCAATGTTCCTTTaGCAGTGGATCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: LCHMVGCSGWALVTLVLVIPMFL*QWISWM
Trigger: CATCCATGAGATCCACTGTCAAAGGAACATTGGTAT...CACCAGGACCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp TCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCAGGCCCATCCATTTGCAGGTCACCTaGCAGTGTTCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SHGIMMLSSTGCELLRPIHLQVT*QCSAAM
Trigger: CATGGCTGCAGAACACTGTCAGGTGACCTGCAAATG...GATGGGCCTGAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CAACATGATCTCGTCAGCTGCACCCTTTATGTCACTGAGAGACCTGGGACCGCCGACTTAGGGCCAACATaGAGTCCAAGTTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: QHDLVSCTLYVTERPGTADLGPT*SPSLHS
Trigger: AGAGTGCAAACTTGGACTTCATGTTGGCCCTAAGTC...GGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTGCAGCTGACGAGATCATGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCATTCACAAGGCAACATaGTCTCGTCAGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERIHKAT*SRQLHP
Trigger: AGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAAT...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGATTCACAAGGCAACATaGTCTCGTCAGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRIHKAT*SRQLHP
Trigger: AGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAAT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTCAAAAGCCTCGTTACTaGCAGACATTGCAACTGGCC +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGQKPRY*QTLQLA
Trigger: GGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTG...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ACTGGTGGCTACCAGGTTTCCAAAATCTTCCCCTCCTTCCACTGGGACCACACAAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: TGGYQVSKIFPSFHWDHTSSKSQ*WQTASR
Trigger: GCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACT...TGTGTGGTCCCAGTGGAAGGAGGGGAAGATTTTGGAAACCTGGTAGCCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCTTTCACAAGGACATTaGGACCACAGTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAALSQGH*DHSCHI
Trigger: TATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AAACATCTGATTCAAAGGCTCTCAGGGGCCTTCGCGGCAGCCTCATGGGTGGGTCTTTCACAAGGACATTaGGACCACAGTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: KHLIQRLSGAFAAASWVGLSQGH*DHSCHI
Trigger: TATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAG...ACCCACCCATGAGGCTGCCGCGAAGGCCCCTGAGAGCCTTTGAATCAGATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACTCTGAGGAGTTGGGATaGAATCCAGATTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHSEELG*NPDSIL
Trigger: CAGGATGGAATCTGGATTGCATCCCAACTCCTCAGA...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCTTGCTTGGAAGGCTTTaGCTTTGCAGTTCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERLLGRL*LCSSAA
Trigger: CGCAGCAGAACTGCAAAGGCAAAGCCTTCCAAGCAA...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCCTTGTATTTCACTGCTaGCGAAAGGTAGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSLVFHC*RKVAAK
Trigger: CTTAGCTGCTACCTTTCGGCAGCAGTGAAATACAAG...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACCACACACCCCTCCCTTaGGATGCTGGACCCTTCCTA +
Preference number: 4 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNHTPLP*DAGPFL
Trigger: TAGGAAGGGTCCAGCATCCCAAGGGAGGGGTGTGTG...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR CCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGATTTGTCTGAGGAGTTaGGATGCAATCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTICLRS*DAIQIP
Trigger: TGGAATCTGGATTGCATCCCAACTCCTCAGACAAAT...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGACCCCAAGATTCTTCGCGGCAGCCTCATaGGTGGGTCCAGAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: NLSEELGCNPDSILTPRFFAAAS*VGPEPQ
Trigger: TTGAGGCTCTGGACCCACCCATGAGGCTGCCGCGAA...GAATCTTGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCGCCACACTGGAGGCTTaGCCTTCATTTTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERATLEA*PSFCRL
Trigger: AAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGC...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTGTCCCTCTGTCACATGGTTaGTTGCAGTGGCTGGGCGTT +
Preference number: 4 (lower is better)
Translates to: EELPVLSEGKAREGLQLVPLSHG*LQWLGV
Trigger: AACGCCCAGCCACTGCAACCAACCATGTGACAGAGG...GACAAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGATCCCCTCTGTCACATaGTTGGTTGCAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLIPSVT*LVAVAG
Trigger: CCCAGCCACTGCAACCAACCATGTGACAGAGGGGAT...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCGCCTCATACACACCTaGGGCCCAATCGAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLRLIHT*GPIECG
Trigger: TCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGCATTTGCAGGTCACCTaGCAGTGTTCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLHLQVT*QCSAAM
Trigger: CATGGCTGCAGAACACTGTCAGGTGACCTGCAAATG...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCATCCAGATTCCATCCTaGCCCCAAGATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSIQIPS*PQDSSY
Trigger: ATATGATGAATCTTGGGGTCAGGATGGAATCTGGAT...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCACCCTTTATGTCACTaGGAGACCTGGGACCGCCAT +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLHPLCH*ETWDRH
Trigger: ATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCACAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCCACCCTTTATGTCACTaGGAGACCTGGGACCGCCAT +
Preference number: 4 (lower is better)
Translates to: PQNSHGIMMLSSTGCELLHPLCH*ETWDRH
Trigger: ATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTG...GAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTCACACTGGTCCTGGTaGTGGAACAGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNSHWSW*WNSTSS
Trigger: AGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGA...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGTCTGGTGAGGTCTCTTaGGGCTGGGAATCCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLSGEVS*GWESSL
Trigger: TAGACTGGATTCCCAGCCTCAAGAGACCTCACCAGA...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTACACTCAGTCTCCTCATaGTTCTTTAACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLHSVSS*FFNSLF
Trigger: GAAGAGGCTGTTAAAGAAGCATGAGGAGACTGAGTG...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCCACTCAGTCTCCTCATaGTTCTTTAACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVHSVSS*FFNSLF
Trigger: GAAGAGGCTGTTAAAGAAGCATGAGGAGACTGAGTG...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CAAGGACATTGCGACCACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAATAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGHCDHSCHIVPSGHHNNSSKSQ*WQTASR
Trigger: GCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACT...ATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp GGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGC +
Preference number: 4 (lower is better)
Translates to: GEELPVLSEGKAREGLQLSSKSQ*WQTASR
Trigger: GCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACT...AAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCATTGCGACCACAGTTaGCACATAGTTCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLHCDHS*HIVPSG
Trigger: CCCGGACGGAACTATGTGGCAACTGTGGTCGCAATG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp ACCTTACCAGAGCGCCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCCAAGATTCATCATATaGATTAGGAGGTATGGCAAC +
Preference number: 4 (lower is better)
Translates to: TLPERLIHTWGPIECGQTPRFII*IRRYGN
Trigger: GTTGCCATACCTCCTAATGCATATGATGAATCTTGG...CGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGGCGCTCTGGTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTACATGAAGTCCAAGTTTaGACTCTCTTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLHEVQV*TLFTTL
Trigger: GAGGGTGGTGAAGAGAGTGCAAACTTGGACTTCATG...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACGAATCACTGAAACGTaGCCAGGGGCTATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLRITET*PGAMAP
Trigger: TGGGGCCATAGCCCCTGGGCACGTTTCAGTGATTCG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTAGTACACGGAGAGGTTaGCCAAAAGCCCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGSTRRG*PKAPKF
Trigger: AAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACT...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGTTACTGACAGACATTaGAACTGGCCTGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRVTDRH*NWPEHL
Trigger: AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAAC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGGCAGTGATGCCAAATaGCAAGGAAGCAGCTTAAAA +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLGSDAK*QGSSLK
Trigger: TTTTAAGCTGCTTCCTTGGCATTTGGCATCACTGCC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTCACAGTCGAGTTTCCTaGTCATCTAGAAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: VATISQKGALAAEAAACIHSRVS*SSRNSA
Trigger: GGCTGAATTTCTAGATGACCAGGAAACTCGACTGTG...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTCTAAATCACAGTGCTaGCAGACAGCAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGSKSQC*QTASRK
Trigger: TTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGA...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTATCTAAATCACAGTGCTaGCAGACAGCAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLSKSQC*QTASRK
Trigger: TTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGA...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp GGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTGCCACACTGGAGGCTTaGCCTTCATTTTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: GEELPVLSEGKAREGLQLATLEA*PSFCRL
Trigger: AAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGC...AAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACAATCAGCAGTTCCTCTaGGTAGAGCTCCTCACAAAA +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHNQQFL*VELLTK
Trigger: TTTTGTGAGGAGCTCTACCCAGAGGAACTGCTGATT...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTATCAAAGAGTCTAACTaGTTACTTGCAGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAIKESN*LLAACC
Trigger: GCAACAGGCTGCAAGTAACCAGTTAGACTCTTTGAT...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CTCGTCAGCTGCACCCTTTATGTCACTGAGAGACCTGGGACCGCCATGAGACTGATCAAAGAGTCTAACTaGTTACTTGCAGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LVSCTLYVTERPGTAMRLIKESN*LLAACC
Trigger: GCAACAGGCTGCAAGTAACCAGTTAGACTCTTTGAT...CAGTCTCATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTGCAGCTGACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTAGTTGGTTGCAGTGGCTaGGCGTTGGTCACACTGGTC +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLVGCSG*ALVTLV
Trigger: GACCAGTGTGACCAACGCCCAGCCACTGCAACCAAC...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTCTCCCACAAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACCATTTGCAGGTCACCTaGCAGTGTTCTGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LSHKLQGESSDLSQGHCDHLQVT*QCSAAM
Trigger: CATGGCTGCAGAACACTGTCAGGTGACCTGCAAATG...GTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGATTGTGGAAAACATCTaGTTCAAAGGCTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRIVENI*FKGSQG
Trigger: CCCCTGAGAGCCTTTGAATCAGATGTTTTCCACAAT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGTCAAACAGATTATTCTaGATTGAAACCTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGPNRVWTDAVHGEVAQKSNRLF*IETWAV
Trigger: TACAGCCCAGGTTTCAATTCAGAATAATCTGTTTGA...CTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACTCCTCCACAGGGTGTaGATTGCTCAGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLLLHRV*IAQAHQ
Trigger: TTGATGGGCCTGAGCAATTCACACCCTGTGGAGGAG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AATTCACAAGGCAACATGATCTCGTCAGCTGCACCCTTTATGTCACTGAGAGACTCACACTGGTCCTGGTaGTGGAACAGCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NSQGNMISSAAPFMSLRDSHWSW*WNSTSS
Trigger: AGAGGAGGTGCTGTTCCATCACCAGGACCAGTGTGA...GTCTCTCAGTGACATAAAGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp GTCCAGAGCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGCACCTGACAGTGTTCTaGAGCCATGTGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VQSLNLSEELGCNPDSILHLTVF*SHVSLH
Trigger: ATGGAGACTCACATGGCTGCAGAACACTGTCAGGTG...CAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAACATGATCTCGTCAGCTaGACCCTTTATGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQHDLVS*TLYVTE
Trigger: CTCAGTGACATAAAGGGTGCAGCTGACGAGATCATG...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTCTTCCAGCTGTACCCCACAGAATTCACATGGGATAATGATGCTCTCCTCCACCCACAGGGTGTGAATTaGTCAGGCCCATCAAAGAGT +
Preference number: 4 (lower is better)
Translates to: LFQLYPTEFTWDNDALLHPQGVN*SGPSKS
Trigger: ACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGG...GTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGGGGTACAGCTGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCTTTGCAGTTCTGCTaGGGTAGTTGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLPLQFC*GSWQLQ
Trigger: CTGCAGCTGCCAACTACCGCAGCAGAACTGCAAAGG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGTTGCTTGGAAGGCTTTaGCTTTGCAGTTCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLLLGRL*LCSSAA
Trigger: CGCAGCAGAACTGCAAAGGCAAAGCCTTCCAAGCAA...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACGGCAAGTGCTGCTGTaGACAGAAGACAGGAACCGA +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLRQVLL*TEDRNR
Trigger: TCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGCACAGTCGAGTTTCCTaGTCATCTAGAAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRHSRVS*SSRNSA
Trigger: GGCTGAATTTCTAGATGACCAGGAAACTCGACTGTG...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTATCTCCATGTCAGATTTaGGAAATGGTTCCTTACAGG +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLSPCQI*EMVPYR
Trigger: CCTGTAAGGAACCATTTCCCAAATCTGACATGGAGA...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TGGAAAGTTCTAAATCACAGTGCTGGCAGACAGCAAGCCGCAAAGGGCACTCAGTCTAAATCACAGTGCTaGCAGACAGCAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: WKVLNHSAGRQQAAKGTQSKSQC*QTASRK
Trigger: TTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGA...CTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CCA 90 bp CGTCCGGGCACCACAATAATCTTCATGTTCCTTCAGTTTGAGAATGGAAAGTTCCGGCAGCCTCATGGGTaGGTCCAGAGCCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: RPGTTIIFMFLQFENGKFRQPHG*VQSLNL
Trigger: CAAATTGAGGCTCTGGACCCACCCATGAGGCTGCCG...GAACTTTCCATTCTCAAACTGAAGGAACATGAAGATTATTGTGGTGCCCGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CCA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTGCTGTAATGTTCCTTTaGTTGGTAGTTCTATTGTGG +
Preference number: 4 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAAVMFL*LVVLLW
Trigger: CCACAATAGAACTACCAACCAAAGGAACATTACAGC...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACTTCACCACCCTCTTTaGGGGGCTGTTGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLLHHPL*GAVGLY
Trigger: ATAGAGGCCAACAGCCCCCCAAAGAGGGTGGTGAAG...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp ACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTTGTTGCAAGAAGTTCTaGAAGATGACATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TSGSSTPLGEELPVLSEGCCKKF*KMTSGS
Trigger: GGAACCTGATGTCATCTTCCAGAACTTCTTGCAACA...ACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTAGAGAATCACCTTACTaGTGGCTACCAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGRESPY*WLPGFQ
Trigger: TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCT...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCAGAGAATCACCTTACTaGTGGCTACCAGGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERRESPY*WLPGFQ
Trigger: TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCT...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGATACCAATGTTCCTTTaGCAGTGGATCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRIPMFL*QWISWM
Trigger: CATCCATGAGATCCACTGTCAAAGGAACATTGGTAT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAACCACAAACTTCAGGGTaGGTCTTCAGATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQPQTSG*VFRSFT
Trigger: TGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGG...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp CCACAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCAAGAGCTGCCAGTATTaGGTGAAGGTAAGGCACGTG +
Preference number: 4 (lower is better)
Translates to: PQNSHGIMMLSSTGCELLKSCQY*VKVRHV
Trigger: CACGTGCCTTACCTTCACTCAATACTGGCAGCTCTT...GAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACCACCTGACAGTGTTCTaGAGCCATGTGAGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNHLTVF*SHVSLH
Trigger: ATGGAGACTCACATGGCTGCAGAACACTGTCAGGTG...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAACTTCTTGTTACATTTaGAGGTCACCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLTSCYI*RSPDSV
Trigger: AACACTGTCAGGTGACCTGCAAATGTAACAAGAAGT...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTACTTCTTGTTACATTTaGAGGTCACCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: VATISQKGALAAEAAACITSCYI*RSPDSV
Trigger: AACACTGTCAGGTGACCTGCAAATGTAACAAGAAGT...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CGTCCGGGCACCACAATAATCTTCATGTTCCTTCAGTTTGAGAATGGAAAGTTCCATTGCGACCACAGTTaGCACATAGTTCCGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RPGTTIIFMFLQFENGKFHCDHS*HIVPSG
Trigger: CCCGGACGGAACTATGTGGCAACTGTGGTCGCAATG...GAACTTTCCATTCTCAAACTGAAGGAACATGAAGATTATTGTGGTGCCCGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAACTTTCACAAGGACATTaGGACCACAGTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQLSQGH*DHSCHI
Trigger: TATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAG...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCAGGTTGTCACATGGTTGGTTaGAGTGGCTGGGCGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SNWLLAACCKKFWKMTSGCHMVG*SGWALV
Trigger: GACCAACGCCCAGCCACTGCAACCAACCATGTGACA...ACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCCTTGTATTTCACTGCTaGCGAAAGGTAGCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTLVFHC*RKVAAK
Trigger: CTTAGCTGCTACCTTTCGGCAGCAGTGAAATACAAG...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCTGTTGCAAGAAGTTCTaGAAGATGACATCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KASLLTDIATGLSTLPERCCKKF*KMTSGS
Trigger: GGAACCTGATGTCATCTTCCAGAACTTCTTGCAACA...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTATCAAAGAGTCTAACTaGTTACTTGCAGCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGIKESN*LLAACC
Trigger: GCAACAGGCTGCAAGTAACCAGTTAGACTCTTTGAT...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCAGGTCATGGTTGGTTGCAGTaGCTGGGCGTTGGTCACACT +
Preference number: 4 (lower is better)
Translates to: SNWLLAACCKKFWKMTSGHGWLQ*LGVGHT
Trigger: AGTGTGACCAACGCCCAGCCACTGCAACCAACCATG...ACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGAATCACCTTACTGGTaGCTACCAGGTTTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRESPYW*LPGFQN
Trigger: ATTTTGGAAACCTGGTAGCCACCAGTAAGGTGATTC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACTCAAACAGATTATTCTaGATTGAAACCTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHSNRLF*IETWAV
Trigger: TACAGCCCAGGTTTCAATTCAGAATAATCTGTTTGA...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTCCAAGATTCATCATATaGATTAGGAGGTATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGPRFII*IRRYGN
Trigger: GTTGCCATACCTCCTAATGCATATGATGAATCTTGG...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CTCTCCCACAAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACTCTGAGGAGTTGGGATaGAATCCAGATTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: LSHKLQGESSDLSQGHCDSEELG*NPDSIL
Trigger: CAGGATGGAATCTGGATTGCATCCCAACTCCTCAGA...GTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTGCTTGGCCTTCATTTTaGAGACTTAGGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLAWPSF*RLRANM
Trigger: CATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGC...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCATGATCTCGTCAGCTaGACCCTTTATGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLHDLVS*TLYVTE
Trigger: CTCAGTGACATAAAGGGTGCAGCTGACGAGATCATG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR GCA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACCAGCTTGTATTTCACTaGTGCCGAAAGGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNQLVFH*CRKVAA
Trigger: AGCTGCTACCTTTCGGCAGCAGTGAAATACAAGCTG...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp CCACAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCTCTAAATCACAGTGCTaGCAGACAGCAAGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: PQNSHGIMMLSSTGCELLSKSQC*QTASRK
Trigger: TTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGA...GAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTAGCCACACTGGAGGCTTaGCCTTCATTTTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLATLEA*PSFCRL
Trigger: AAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGC...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AGCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGACCCCAATACCAATGTTCCTTTaGCAGTGGATCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: SLNLSEELGCNPDSILTPIPMFL*QWISWM
Trigger: CATCCATGAGATCCACTGTCAAAGGAACATTGGTAT...TGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp AACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTAGACTTAGGGCCAACATaGAGTCCAAGTTTGCACTCT +
Preference number: 4 (lower is better)
Translates to: NTSKASLLTDIATGLSTLDLGPT*SPSLHS
Trigger: AGAGTGCAAACTTGGACTTCATGTTGGCCCTAAGTC...TAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CCA 90 bp TGGAAAGTTCTAAATCACAGTGCTGGCAGACAGCAAGCCGCAAAGGGCACTCAGGCTGTAATGTTCCTTTaGTTGGTAGTTCTATTGTGG +
Preference number: 4 (lower is better)
Translates to: WKVLNHSAGRQQAAKGTQAVMFL*LVVLLW
Trigger: CCACAATAGAACTACCAACCAAAGGAACATTACAGC...CTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
3UTR CAA 72 bp CATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATaGCTCAGGCCCATCAAAGAGTCTAACTGGTTACTT +
Preference number: 4 (lower is better)
Translates to: HGIMMLSSTGCE*LRPIKESNWLL
Trigger: AAGTAACCAGTTAGACTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp AGCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGACCCCAACTTCTTGTTACATTTaGAGGTCACCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SLNLSEELGCNPDSILTPTSCYI*RSPDSV
Trigger: AACACTGTCAGGTGACCTGCAAATGTAACAAGAAGT...TGGGGTCAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp AATTCACAAGGCAACATGATCTCGTCAGCTGCACCCTTTATGTCACTGAGAGACCTTTCACAAGGACATTaGGACCACAGTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: NSQGNMISSAAPFMSLRDLSQGH*DHSCHI
Trigger: TATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAG...GTCTCTCAGTGACATAAAGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CCA 90 bp CTCTCCCACAAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACATTTGTCTGAGGAGTTaGGATGCAATCCAGATTCCA +
Preference number: 4 (lower is better)
Translates to: LSHKLQGESSDLSQGHCDICLRS*DAIQIP
Trigger: TGGAATCTGGATTGCATCCCAACTCCTCAGACAAAT...GTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CCA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGGCTGTAATGTTCCTTTaGTTGGTAGTTCTATTGTGG +
Preference number: 4 (lower is better)
Translates to: LQLNTSKASLLTDIATGLAVMFL*LVVLLW
Trigger: CCACAATAGAACTACCAACCAAAGGAACATTACAGC...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR TCA 90 bp AAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACCACAGTTGCATCCAGATTCCATCCTaGCCCCAAGATTCATCATAT +
Preference number: 4 (lower is better)
Translates to: KLQGESSDLSQGHCDHSCIQIPS*PQDSSY
Trigger: ATATGATGAATCTTGGGGTCAGGATGGAATCTGGAT...GCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp AATTCACAAGGCAACATGATCTCGTCAGCTGCACCCTTTATGTCACTGAGAGACACTTCTTGTTACATTTaGAGGTCACCTGACAGTGTT +
Preference number: 4 (lower is better)
Translates to: NSQGNMISSAAPFMSLRDTSCYI*RSPDSV
Trigger: AACACTGTCAGGTGACCTGCAAATGTAACAAGAAGT...GTCTCTCAGTGACATAAAGGGTGCAGCTGACGAGATCATGTTGCCTTGTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR TCA 90 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCAGGTTTCTTCAATTCAGGGTaGGTCTTCAGATCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SNWLLAACCKKFWKMTSGFFNSG*VFRSFT
Trigger: TGTGAAAGATCTGAAGACTCACCCTGAATTGAAGAA...ACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR GCA 90 bp CGTCCGGGCACCACAATAATCTTCATGTTCCTTCAGTTTGAGAATGGAAAGTTCGTCTTAAGTACCTCATaGTTCTTTAACAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RPGTTIIFMFLQFENGKFVLSTS*FFNSLF
Trigger: GAAGAGGCTGTTAAAGAAGCATGAGGTACTTAAGAC...GAACTTTCCATTCTCAAACTGAAGGAACATGAAGATTATTGTGGTGCCCGGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR TCA 90 bp TGCAATCCAGATTCCATCCTGACCCCAAGATTCATCATATGCATTAGGAGGTATTCAAACAGATTATTCTaGATTGAAACCTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CNPDSILTPRFIICIRRYSNRLF*IETWAV
Trigger: TACAGCCCAGGTTTCAATTCAGAATAATCTGTTTGA...ATACCTCCTAATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR GCA 90 bp ATGTTCCTTTGGTTGGTAGTTCTATTGTGGAAAACATCTGATTCAAAGGCTCTCCCAAGATTCATCATATaGATTAGGAGGTATGGCAAC +
Preference number: 4 (lower is better)
Translates to: MFLWLVVLLWKTSDSKALPRFII*IRRYGN
Trigger: GTTGCCATACCTCCTAATGCATATGATGAATCTTGG...GAGAGCCTTTGAATCAGATGTTTTCCACAATAGAACTACCAACCAAAGGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS TCA 90 bp CCACGCCGGCAGCTCGAGGCTCGGACTCTAGGCCCAGGCCGGCACTaGGCCCAGCTCCGCCCGGGACGCGGTGGTCACAGCGGCGCTGCG +
Preference number: 5 (lower is better)
Translates to: PRRQLEARTLGPGRH*AQLRPGRGGHSGAA
Trigger: CGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGGAGCTGGGCTCAGTGCCGGCCTGGGCCTAGAGTCCGAGCCTCGAGCTGCCGGCGTGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS CCA 90 bp TCTAGGCCCAGGCCGGCACTGAGCCCAGCTCCGCCCGGGACGCGGTaGTCACAGCGGCGCTGCGAACGACGCCCGCTTCCCGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: SRPRPALSPAPPGTR*SQRRCERRPLPGSP
Trigger: TGGTGAGCCGGGAAGCGGGCGTCGTTCGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGGAGCTGGGCTCAGTGCCGGCCTGGGCCTAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS GCA 90 bp GCACTGAGCCCAGCTCCGCCCGGGACGCGGTGGTCACAGCGGCGCTaGGAACGACGCCCGCTTCCCGGCTCACCAGACCAACCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: ALSPAPPGTRWSQRR*ERRPLPGSPDQPRP
Trigger: CGGCCTAGGTTGGTCTGGTGAGCCGGGAAGCGGGCGTCGTTCGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGGAGCTGGGCTCAGTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS CCA 90 bp CTCGCCCACACACCCCTCCCTTGGGATGCTGGACCCTTCCTAAACTaGAGGCCACAGGGGATCTCCAGCCGCGTGCCGCCGCTACACCTC +
Preference number: 5 (lower is better)
Translates to: LAHTPLPWDAGPFLN*RPQGISSRVPPLHL
Trigger: GAGGTGTAGCGGCGGCACGCGGCTGGAGATCCCCTGTGGCCTCCAGTTTAGGAAGGGTCCAGCATCCCAAGGGAGGGGTGTGTGGGCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS TCA 90 bp TGCCGCCGCTACACCTCACCAGGGACGAGAGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACACGGAGCCTCCTCTGTCAGACCCCGC +
Preference number: 5 (lower is better)
Translates to: CRRYTSPGTRGETLS*HTSCRHGASSVRPR
Trigger: GCGGGGTCTGACAGAGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGGTGAGGTGTAGCGGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS TCA 90 bp CCGCGTGCCGCCGCTACACCTCACCAGGGACGAGAGGAGAAACGCTaGGTTGACACACTAGCTGCAGACACGGAGCCTCCTCTGTCAGAC +
Preference number: 5 (lower is better)
Translates to: PRAAATPHQGREEKR*VDTLAADTEPPLSD
Trigger: GTCTGACAGAGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGGTGAGGTGTAGCGGCGGCACGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR CAA 90 bp CTGGTCGGCCTCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCCTGTCACATGGTTGGTaGCAGTGGCTGGGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: LVGLTYGPPEVLLCHTGGLSHGW*QWLGVG
Trigger: ACCAACGCCCAGCCACTGCAACCAACCATGTGACAG...GCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGAGGCCGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS CCA 90 bp GCTATGGCCCCATTCTGGCTGTCTCGATTCCGCCCCTGGATGTCCTaGCTGTCTGAGTTGCTGAGCTTCGGCACACAAGGAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AMAPFWLSRFRPWMS*LSELLSFGTQGELG
Trigger: GCCCAGCTCTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGACAGCCAGAATGGGGCCATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CAGCAAGCCGCAAAGGGCACTCAGTCTCCTTGTGATCCGCCCGCCTCAGCCTCCACATTGCGACCACAGTaGCCACATAGTTCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: QQAAKGTQSPCDPPASASTLRPQ*PHSSVR
Trigger: CCGGACGGAACTATGTGGCAACTGTGGTCGCAATGT...GGAGGCTGAGGCGGGCGGATCACAAGGAGACTGAGTGCCCTTTGCGGCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTACCACACACCCCTCCCTaGGGATGCTGGACCCTTCCT +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLPHTPP*GCWTLP
Trigger: AGGAAGGGTCCAGCATCCCAAGGGAGGGGTGTGTGG...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS-3UTR CAA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACTGCAGTGGCTGGGCGTaGGTCACACTGGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHCSGWA*VTLVLV
Trigger: CACCAGGACCAGTGTGACCAACGCCCAGCCACTGCA...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTTGCAGTGGCTGGGCGTaGGTCACACTGGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VATISQKGALAAEAAACICSGWA*VTLVLV
Trigger: CACCAGGACCAGTGTGACCAACGCCCAGCCACTGCA...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCCCTCTGTCACATGGTaGGTTGCAGTGGCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAPSVTW*VAVAGR
Trigger: ACGCCCAGCCACTGCAACCAACCATGTGACAGAGGG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTCGTCAGCTGCACCCTTTATGTCACTGAGAGACCTGGGACCGCCATGAGACTGCCCTCTGTCACATGGTaGGTTGCAGTGGCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: LVSCTLYVTERPGTAMRLPSVTW*VAVAGR
Trigger: ACGCCCAGCCACTGCAACCAACCATGTGACAGAGGG...CAGTCTCATGGCGGTCCCAGGTCTCTCAGTGACATAAAGGGTGCAGCTGACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CCAAGGGGCAGTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCGTTGCTTGGAAGGCTTaGCCTTTGCAGTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PRGSGDNKSKGSPGSRGCVAWKA*PLQFCC
Trigger: GCAGCAGAACTGCAAAGGCAAAGCCTTCCAAGCAAC...GCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCACTGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GAGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATATCCCCAGCTCCCTGTaGCTTGGAAGGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: EVGLHSGKCCCAQKTGTDIPSSL*LGRLCL
Trigger: AAGGCAAAGCCTTCCAAGCAACAGGGAGCTGGGGAT...ATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS CCA 90 bp TGGCTGTCTGAGTTGCTGAGCTTCGGCACACAAGGAGAGCTGGGCTaGCACCCAGGTCTGGGGCCTGATGTTGATCTCGATAGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: WLSELLSFGTQGELG*HPGLGPDVDLDSWL
Trigger: TAACCAGCTATCGAGATCAACATCAGGCCCCAGACCTGGGTGCCAGCCCAGCTCTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGACATTGCGACCACAGTaGCCACATAGTTCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: LGPNRVWTDAVHGEVAQKTLRPQ*PHSSVR
Trigger: CCGGACGGAACTATGTGGCAACTGTGGTCGCAATGT...CTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCTGTCACATGGTTGGTaGCAGTGGCTGGGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: SMLPREQKAVMPNAKEAALSHGW*QWLGVG
Trigger: ACCAACGCCCAGCCACTGCAACCAACCATGTGACAG...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTACATTGCGACCACAGTaGCCACATAGTTCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: SSTPLGEELPVLSEGKARTLRPQ*PHSSVR
Trigger: CCGGACGGAACTATGTGGCAACTGTGGTCGCAATGT...ACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp GTCACTGAGAGACCTGGGACCGCCATGAGACTGGTCGGCCTCACATACGGCCCTCTCTTCTCCAACTTCTaGTTACATTTGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: VTERPGTAMRLVGLTYGPLFSNF*LHLQVT
Trigger: GGTGACCTGCAAATGTAACAAGAAGTTGGAGAAGAG...AGGGCCGTATGTGAGGCCGACCAGTCTCATGGCGGTCCCAGGTCTCTCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp ATCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTCCACAGGGTGTGAATaGCTCAGGCCCATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: IHAPPGTEGSDAKCQGSSSTGCE*LRPIKE
Trigger: CTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGA...GCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TTTCACTGCTGCCGAAAGGTAGCAGCTAAGGCTGAAGCGTTCCTCAACCGCCACATCCCCAGCTCCCTGTaGCTTGGAAGGCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: FHCCRKVAAKAEAFLNRHIPSSL*LGRLCL
Trigger: AAGGCAAAGCCTTCCAAGCAACAGGGAGCTGGGGAT...GTGGCGGTTGAGGAACGCTTCAGCCTTAGCTGCTACCTTTCGGCAGCAGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAAGCCGAGGCTGCAGCTaGTATTTCACTGCTGCCGAA +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLSRGCS*YFTAAE
Trigger: TTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCT...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAACATTGCGACCACAGTaGCCACATAGTTCCGTCCGG +
Preference number: 5 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLTLRPQ*PHSSVR
Trigger: CCGGACGGAACTATGTGGCAACTGTGGTCGCAATGT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AGGTGGGCCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGAATTTGTCTGAGGAGTaGGGATGCAATCCAGATTCC +
Preference number: 5 (lower is better)
Translates to: RWACTAASAAVHRRQEPMNLSEE*GCNPDS
Trigger: GGAATCTGGATTGCATCCCAACTCCTCAGACAAATT...CATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGGCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTGTCCAGAGCCTCAATTaGTCTGAGGAGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: VATISQKGALAAEAAACIVQSLN*SEELGC
Trigger: GCATCCCAACTCCTCAGACAAATTGAGGCTCTGGAC...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTATCCACAGGGTGTGAATaGCTCAGGCCCATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLSTGCE*LRPIKE
Trigger: CTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGA...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TCCATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTGTCTGGGGCCTGATGTaGATCTCGATAGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: SMLPREQKAVMPNAKEAAVWGLM*ISIAGY
Trigger: ATAACCAGCTATCGAGATCAACATCAGGCCCCAGAC...AGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CCCAAATTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTCCTGGCTGTCTGAGTaGCTGAGCTTCGGCACACAA +
Preference number: 5 (lower is better)
Translates to: PKFRPQQGRESPYWWLPGSWLSE*LSFGTQ
Trigger: TTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGA...ACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCTCCTGGCTGTCTGAGTaGCTGAGCTTCGGCACACAA +
Preference number: 5 (lower is better)
Translates to: KASLLTDIATGLSTLPERSWLSE*LSFGTQ
Trigger: TTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGA...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGGTCCAGAGCCTCAATTaGTCTGAGGAGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRVQSLN*SEELGC
Trigger: GCATCCCAACTCCTCAGACAAATTGAGGCTCTGGAC...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTGAAGAGCTGCCAGTATaGAGTGAAGGTAAGGCACGT +
Preference number: 5 (lower is better)
Translates to: VATISQKGALAAEAAACIEELPV*SEGKAR
Trigger: ACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTC...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp ATGACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAATCCACAGGGTGTGAATaGCTCAGGCCCATCAAAGAG +
Preference number: 5 (lower is better)
Translates to: MTSGSSTPLGEELPVLSESTGCE*LRPIKE
Trigger: CTCTTTGATGGGCCTGAGCAATTCACACCCTGTGGA...TTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp ACTGGTGGCTACCAGGTTTCCAAAATCTTCCCCTCCTTCCACTGGGACCACACATGGAAGGCTTTGCCTTaGCAGTTCTGCTGCGGTAGT +
Preference number: 5 (lower is better)
Translates to: TGGYQVSKIFPSFHWDHTWKALP*QFCCGS
Trigger: ACTACCGCAGCAGAACTGCAAAGGCAAAGCCTTCCA...TGTGTGGTCCCAGTGGAAGGAGGGGAAGATTTTGGAAACCTGGTAGCCACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS CCA 90 bp TCACATACGGCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCTTaGCCTTCATTTTGCAGACTTAGGGCCAACATGAAGTCCAAGTTT +
Preference number: 5 (lower is better)
Translates to: SHTALQKSCSATLEA*PSFCRLRANMKSKF
Trigger: AAACTTGGACTTCATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGCCGTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548277.1
ENST00000552890.5
ENST00000552896.1
CDS-3UTR CAA 90 bp ACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGGTTCTTTCACAAGGACATaGCGACCACAGTTGCCACAT +
Preference number: 5 (lower is better)
Translates to: TSGSSTPLGEELPVLSEGSFTRT*RPQLPH
Trigger: ATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGA...ACCTTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCAGGTTGCAGTGGCTGGGCGTaGGTCACACTGGTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SNWLLAACCKKFWKMTSGCSGWA*VTLVLV
Trigger: CACCAGGACCAGTGTGACCAACGCCCAGCCACTGCA...ACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACCTGTCACATGGTTGGTaGCAGTGGCTGGGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNLSHGW*QWLGVG
Trigger: ACCAACGCCCAGCCACTGCAACCAACCATGTGACAG...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp TTTAGGCCCCAACAGGGCAGAGAATCACCTTACTGGTGGCTACCAGGTTTCCAATGGAAGGCTTTGCCTTaGCAGTTCTGCTGCGGTAGT +
Preference number: 5 (lower is better)
Translates to: FRPQQGRESPYWWLPGFQWKALP*QFCCGS
Trigger: ACTACCGCAGCAGAACTGCAAAGGCAAAGCCTTCCA...TTGGAAACCTGGTAGCCACCAGTAAGGTGATTCTCTGCCCTGTTGGGGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS GCA 90 bp CTCCAGAAGTCCTGCTCTGCCACACTGGAGGCTTGGCCTTCATTTTaGAGACTTAGGGCCAACATGAAGTCCAAGTTTGCACTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LQKSCSATLEAWPSF*RLRANMKSKFALSS
Trigger: TGAAGAGAGTGCAAACTTGGACTTCATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548277.1
ENST00000552890.5
ENST00000552896.1
CDS-3UTR CAA 90 bp CCTCATACACACCTGGGGCCCAATCGAGTGTGGACAGACGCAGTACACGGAGAGACAGGAATTTCTTTTTaGCAGTTGTCACACAGTCGA +
Preference number: 5 (lower is better)
Translates to: PHTHLGPNRVWTDAVHGETGISF*QLSHSR
Trigger: TCGACTGTGTGACAACTGCAAAAAAGAAATTCCTGT...CTCTCCGTGTACTGCGTCTGTCCACACTCGATTGGGCCCCAGGTGTGTATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AAACATCTGATTCAAAGGCTCTCAGGGGCCTTCGCGGCAGCCTCATGGGTGGGTCATACCAATGTTCCTTaGACAGTGGATCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: KHLIQRLSGAFAAASWVGHTNVP*TVDLMD
Trigger: ATCCATGAGATCCACTGTCAAAGGAACATTGGTATG...ACCCACCCATGAGGCTGCCGCGAAGGCCCCTGAGAGCCTTTGAATCAGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGTCTCCATGTCAGATTaGGGAAATGGTTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLVSMSD*GNGSLQ
Trigger: CTGTAAGGAACCATTTCCCAAATCTGACATGGAGAC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTACCAGAGCGCTCTTTCACAAGGACATaGCGACCACAGTTGCCACAT +
Preference number: 5 (lower is better)
Translates to: KASLLTDIATGLSTLPERSFTRT*RPQLPH
Trigger: ATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGA...GCGCTCTGGTAAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTAAATCACAGTGCTGGCAGACAGCAAGCCGCAAAGGGCACTCAGTCTCCTTGTTCTTTCACAAGGACATaGCGACCACAGTTGCCACAT +
Preference number: 5 (lower is better)
Translates to: LNHSAGRQQAAKGTQSPCSFTRT*RPQLPH
Trigger: ATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGA...ACAAGGAGACTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGTGAAGGGTTACAGCTaGTCTGATGGTCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLVKGYS*SDGQSA
Trigger: TGCTGATTGACCATCAGACAAGCTGTAACCCTTCAC...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp ATGACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGTGAAGGGTTACAGCTaGTCTGATGGTCAATCAGCA +
Preference number: 5 (lower is better)
Translates to: MTSGSSTPLGEELPVLSEVKGYS*SDGQSA
Trigger: TGCTGATTGACCATCAGACAAGCTGTAACCCTTCAC...TTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTAGCCGAGGCTGCAGCTaGTATTTCACTGCTGCCGAA +
Preference number: 5 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLSRGCS*YFTAAE
Trigger: TTCGGCAGCAGTGAAATACAAGCTGCAGCCTCGGCT...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTACATACCAATGTTCCTTaGACAGTGGATCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLHTNVP*TVDLMD
Trigger: ATCCATGAGATCCACTGTCAAAGGAACATTGGTATG...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GATCTTTCACAAGGACATTGCGACCACAGTTGCCACATAGTTCCGTCCGGGCACGTCTCCATGTCAGATTaGGGAAATGGTTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: DLSQGHCDHSCHIVPSGHVSMSD*GNGSLQ
Trigger: CTGTAAGGAACCATTTCCCAAATCTGACATGGAGAC...GTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp ATGACATCAGGTTCCTCCACCCCTCTGGGGGAAGAGCTGCCAGTATTGAGTGAAGTCTCCATGTCAGATTaGGGAAATGGTTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: MTSGSSTPLGEELPVLSEVSMSD*GNGSLQ
Trigger: CTGTAAGGAACCATTTCCCAAATCTGACATGGAGAC...TTCACTCAATACTGGCAGCTCTTCCCCCAGAGGGGTGGAGGAACCTGATGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTACTCTTCTCCAACTTCTaGTTACATTTGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLLFSNF*LHLQVT
Trigger: GGTGACCTGCAAATGTAACAAGAAGTTGGAGAAGAG...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAAATTTGTCTGAGGAGTaGGGATGCAATCCAGATTCC +
Preference number: 5 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLNLSEE*GCNPDS
Trigger: GGAATCTGGATTGCATCCCAACTCCTCAGACAAATT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp AGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAGGAGTCTAACTGGTTACTaGCAGCCTGTTGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: SVDRRSTRRGCPKAPKFRSLTGY*QPVARS
Trigger: ACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACT...CCTAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACGTTGCTTGGAAGGCTTaGCCTTTGCAGTTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNVAWKA*PLQFCC
Trigger: GCAGCAGAACTGCAAAGGCAAAGCCTTCCAAGCAAC...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTCAGTACACGGAGAGGTaGCCCAAAAGCCCCCAAATT +
Preference number: 5 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLQYTER*PKSPQI
Trigger: AATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTG...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTCTGGAGACACCCTCTTCTCCAACTTCTaGTTACATTTGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: QVLLCTEDRNRCKVSGDTLFSNF*LHLQVT
Trigger: GGTGACCTGCAAATGTAACAAGAAGTTGGAGAAGAG...GGTGTCTCCAGAGACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGTCTTTCACAAGGACATaGCGACCACAGTTGCCACAT +
Preference number: 5 (lower is better)
Translates to: LQLNTSKASLLTDIATGLSFTRT*RPQLPH
Trigger: ATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGA...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CACTCACCTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACGTCTGGGGCCTGATGTaGATCTCGATAGCTGGTTAT +
Preference number: 5 (lower is better)
Translates to: HSPPAQHIKSLVTDRHCNVWGLM*ISIAGY
Trigger: ATAACCAGCTATCGAGATCAACATCAGGCCCCAGAC...GTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS GCA 90 bp TCTTCATGTTCCTTCAGTTTGAGAATGGAAAGTTCTAAATCACAGTaGTGGCAGACAGCAAGCCGCAAAGGGCACTCAGTCTCCTCATGC +
Preference number: 5 (lower is better)
Translates to: SSCSFSLRMESSKSQ*WQTASRKGHSVSSC
Trigger: GCATGAGGAGACTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACTTTCCATTCTCAAACTGAAGGAACATGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548092.5
ENST00000549358.5
ENST00000550051.5
ENST00000552890.5
ENST00000552896.1
CDS-3UTR CAA 90 bp CGAGTGTGGACAGACGCAGTACACGGAGAGGTTGCCCAAAAGCCCCCAAATTTAACAGGAATTTCTTTTTaGCAGTTGTCACACAGTCGA +
Preference number: 5 (lower is better)
Translates to: RVWTDAVHGEVAQKPPNLTGISF*QLSHSR
Trigger: TCGACTGTGTGACAACTGCAAAAAAGAAATTCCTGT...TAAATTTGGGGGCTTTTGGGCAACCTCTCCGTGTACTGCGTCTGTCCACACTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTCATACCAATGTTCCTTaGACAGTGGATCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: GEELPVLSEGKAREGLQLHTNVP*TVDLMD
Trigger: ATCCATGAGATCCACTGTCAAAGGAACATTGGTATG...AAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CCTGCACAGCGGCAAGTGCTGCTGTGCACAGAAGACAGGAACCGATGTAAAGTCTGGTTGGTAGTTCTATaGTGGAAAACATCTGATTCA +
Preference number: 5 (lower is better)
Translates to: PAQRQVLLCTEDRNRCKVWLVVL*WKTSDS
Trigger: TGAATCAGATGTTTTCCACAATAGAACTACCAACCA...GACTTTACATCGGTTCCTGTCTTCTGTGCACAGCAGCACTTGCCGCTGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GTGGCGACAATAAGTCAAAAGGGAGCCCTGGCAGCCGAGGCTGCAGCTTGTATTGTAATGTTCCTTTGGTaGGTAGTTCTATTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: VATISQKGALAAEAAACIVMFLW*VVLLWK
Trigger: TTTCCACAATAGAACTACCAACCAAAGGAACATTAC...AATACAAGCTGCAGCCTCGGCTGCCAGGGCTCCCTTTTGACTTATTGTCGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CATGCTCCCCCGGGAACAGAAGGCAGTGATGCCAAATGCCAAGGAAGCAGCTTAGTAATGTTCCTTTGGTaGGTAGTTCTATTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: HAPPGTEGSDAKCQGSSLVMFLW*VVLLWK
Trigger: TTTCCACAATAGAACTACCAACCAAAGGAACATTAC...TAAGCTGCTTCCTTGGCATTTGGCATCACTGCCTTCTGTTCCCGGGGGAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGTCTAACTGGTTACTaGCAGCCTGTTGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: LQLNTSKASLLTDIATGLSLTGY*QPVARS
Trigger: ACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACT...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS GCA 90 bp TGTTCTTCAATTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTaGGACCACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAAT +
Preference number: 5 (lower is better)
Translates to: CSSIQGESSDLSQGH*DHSCHIVPSGHHNN
Trigger: ATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAATTGAAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp TGGAAAGTTCTAAATCACAGTGCTGGCAGACAGCAAGCCGCAAAGGGCACTCAGACAGGAATTTCTTTTTaGCAGTTGTCACACAGTCGA +
Preference number: 5 (lower is better)
Translates to: WKVLNHSAGRQQAAKGTQTGISF*QLSHSR
Trigger: TCGACTGTGTGACAACTGCAAAAAAGAAATTCCTGT...CTGAGTGCCCTTTGCGGCTTGCTGTCTGCCAGCACTGTGATTTAGAACTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp GGGGAAGAGCTGCCAGTATTGAGTGAAGGTAAGGCACGTGAAGGGTTACAGCTTACAGGAATTTCTTTTTaGCAGTTGTCACACAGTCGA +
Preference number: 5 (lower is better)
Translates to: GEELPVLSEGKAREGLQLTGISF*QLSHSR
Trigger: TCGACTGTGTGACAACTGCAAAAAAGAAATTCCTGT...AAGCTGTAACCCTTCACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGCATACCAATGTTCCTTaGACAGTGGATCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: LQLNTSKASLLTDIATGLHTNVP*TVDLMD
Trigger: ATCCATGAGATCCACTGTCAAAGGAACATTGGTATG...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGAGCACCTTGTCTCCATGTCAGATTaGGGAAATGGTTCCTTACAG +
Preference number: 5 (lower is better)
Translates to: QHIKSLVTDRHCNWPEHLVSMSD*GNGSLQ
Trigger: CTGTAAGGAACCATTTCCCAAATCTGACATGGAGAC...AAGGTGCTCAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp CTCTCCCACAAACTTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTGCGACCTCTTCTCCAACTTCTaGTTACATTTGCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: LSHKLQGESSDLSQGHCDLFSNF*LHLQVT
Trigger: GGTGACCTGCAAATGTAACAAGAAGTTGGAGAAGAG...GTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAGTTTGTGGGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp CACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAATCTTCATGTTCCTTCAAATTTGTCTGAGGAGTaGGGATGCAATCCAGATTCC +
Preference number: 5 (lower is better)
Translates to: HSCHIVPSGHHNNLHVPSNLSEE*GCNPDS
Trigger: GGAATCTGGATTGCATCCCAACTCCTCAGACAAATT...TGAAGGAACATGAAGATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp TGCAATCCAGATTCCATCCTGACCCCAAGATTCATCATATGCATTAGGAGGTATGTCCAGAGCCTCAATTaGTCTGAGGAGTTGGGATGC +
Preference number: 5 (lower is better)
Translates to: CNPDSILTPRFIICIRRYVQSLN*SEELGC
Trigger: GCATCCCAACTCCTCAGACAAATTGAGGCTCTGGAC...ATACCTCCTAATGCATATGATGAATCTTGGGGTCAGGATGGAATCTGGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS-3UTR CAA 90 bp TCTAACTGGTTACTTGCAGCCTGTTGCAAGAAGTTCTGGAAGATGACATCAGGTGAAGAGCTGCCAGTATaGAGTGAAGGTAAGGCACGT +
Preference number: 5 (lower is better)
Translates to: SNWLLAACCKKFWKMTSGEELPV*SEGKAR
Trigger: ACGTGCCTTACCTTCACTCAATACTGGCAGCTCTTC...ACCTGATGTCATCTTCCAGAACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS-3UTR CAA 90 bp CCACAGAATTCACATGGGATAATGATGCTCTCCTCCACAGGGTGTGAATTGCTCAGTCTAACTGGTTACTaGCAGCCTGTTGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: PQNSHGIMMLSSTGCELLSLTGY*QPVARS
Trigger: ACTTCTTGCAACAGGCTGCAAGTAACCAGTTAGACT...GAGCAATTCACACCCTGTGGAGGAGAGCATCATTATCCCATGTGAATTCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS CCA 90 bp GAAGCAGGCTGGATGCTTCCTGACTACAGGAACATGCTCTCTGGCTaGGTTGGTAGAAACTTCACTGTAAAGCTGTACAAAAATGAAATC +
Preference number: 5 (lower is better)
Translates to: EAGWMLPDYRNMLSG*VGRNFTVKLYKNEI
Trigger: GATTTCATTTTTGTACAGCTTTACAGTGAAGTTTCTACCAACCCAGCCAGAGAGCATGTTCCTGTAGTCAGGAAGCATCCAGCCTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548092.5
CDS-3UTR CAA 90 bp CAAGGACATTGCGACCACAGTTGCCACATAGTTCCGTCCGGGCACCACAATAATGTAATGTTCCTTTGGTaGGTAGTTCTATTGTGGAAA +
Preference number: 5 (lower is better)
Translates to: QGHCDHSCHIVPSGHHNNVMFLW*VVLLWK
Trigger: TTTCCACAATAGAACTACCAACCAAAGGAACATTAC...ATTATTGTGGTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS CCA 90 bp GGTTCAAAGATCATATCTAAGCAGTTGTCACACAGTCGAGTTTCCTaGTCATCTAGAAATTCAGCCATCTTTAGCTCTTCCAGGGACGAG +
Preference number: 5 (lower is better)
Translates to: GSKIISKQLSHSRVS*SSRNSAIFSSSRDE
Trigger: CTCGTCCCTGGAAGAGCTAAAGATGGCTGAATTTCTAGATGACCAGGAAACTCGACTGTGTGACAACTGCTTAGATATGATCTTTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548092.5
CDS-3UTR CAA 90 bp CTCCAGCTCAACACATCAAAAGCCTCGTTACTGACAGACATTGCAACTGGCCTGTGGTTGGTAGTTCTATaGTGGAAAACATCTGATTCA +
Preference number: 5 (lower is better)
Translates to: LQLNTSKASLLTDIATGLWLVVL*WKTSDS
Trigger: TGAATCAGATGTTTTCCACAATAGAACTACCAACCA...CAGGCCAGTTGCAATGTCTGTCAGTAACGAGGCTTTTGATGTGTTGAGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS-3UTR CAA 90 bp GTCCAGAGCCTCAATTTGTCTGAGGAGTTGGGATGCAATCCAGATTCCATCCTGTGGTTGGTAGTTCTATaGTGGAAAACATCTGATTCA +
Preference number: 5 (lower is better)
Translates to: VQSLNLSEELGCNPDSILWLVVL*WKTSDS
Trigger: TGAATCAGATGTTTTCCACAATAGAACTACCAACCA...CAGGATGGAATCTGGATTGCATCCCAACTCCTCAGACAAATTGAGGCTCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547063.5
CDS TCA 90 bp TTGGGAAATGGTTCCTTACAGGTAGGACACATACCAATGTTCCTTTaGCAGTGGATCTCATGGATGGTAAAGTTAAACACAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: LGNGSLQVGHIPMFL*QWISWMVKLNTGIS
Trigger: AGAAATTCCTGTGTTTAACTTTACCATCCATGAGATCCACTGTCAAAGGAACATTGGTATGTGTCCTACCTGTAAGGAACCATTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000547063.5
ENST00000548092.5
ENST00000549358.5
ENST00000550051.5
ENST00000552890.5
ENST00000552896.1
CDS CCA 72 bp AGGCCGGCACTGAGCCCAGCTCCGCCCGGGACGCGGTaGTCACAGCGGCGCTGCGAACGACGCCCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RPALSPAPPGTR*SQRRCERRPLP
Trigger: GGGAAGCGGGCGTCGTTCGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGGAGCTGGGCTCAGTGCCGGCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS TCA 72 bp CAGCTCGAGGCTCGGACTCTAGGCCCAGGCCGGCACTaGGCCCAGCTCCGCCCGGGACGCGGTGGTCACAGC +
Preference number: 6 (lower is better)
Translates to: QLEARTLGPGRH*AQLRPGRGGHS
Trigger: GCTGTGACCACCGCGTCCCGGGCGGAGCTGGGCTCAGTGCCGGCCTGGGCCTAGAGTCCGAGCCTCGAGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS GCA 72 bp CCAGCTCCGCCCGGGACGCGGTGGTCACAGCGGCGCTaGGAACGACGCCCGCTTCCCGGCTCACCAGACCAA +
Preference number: 6 (lower is better)
Translates to: PAPPGTRWSQRR*ERRPLPGSPDQ
Trigger: TTGGTCTGGTGAGCCGGGAAGCGGGCGTCGTTCGCAGCGCCGCTGTGACCACCGCGTCCCGGGCGGAGCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS TCA 72 bp GCTGTCTCGATTCCGCCCCTGGATGTCCTGGCTGTCTaGGTTGCTGAGCTTCGGCACACAAGGAGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: AVSIPPLDVLAV*VAELRHTRRAG
Trigger: CCCAGCTCTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS CAA 72 bp TCTCGATTCCGCCCCTGGATGTCCTGGCTGTCTGAGTaGCTGAGCTTCGGCACACAAGGAGAGCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRFRPWMSWLSE*LSFGTQGELGW
Trigger: CCAGCCCAGCTCTCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS TCA 72 bp GCCGCTACACCTCACCAGGGACGAGAGGAGAAACGCTaGGTTGACACACTAGCTGCAGACACGGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: AATPHQGREEKR*VDTLAADTEPP
Trigger: AGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGGTGAGGTGTAGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS CCA 72 bp GGCTGGGAATCCAGTCTAGGAATCCCCTCTGTCACATaGTTGGTTGCAGTGGCTGGGCGTTGGTCACACTGG +
Preference number: 6 (lower is better)
Translates to: GWESSLGIPSVT*LVAVAGRWSHW
Trigger: CCAGTGTGACCAACGCCCAGCCACTGCAACCAACCATGTGACAGAGGGGATTCCTAGACTGGATTCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS CCA 72 bp TCGGCACACAAGGAGAGCTGGGCTGGCACCCAGGTCTaGGGCCTGATGTTGATCTCGATAGCTGGTTATAGG +
Preference number: 6 (lower is better)
Translates to: SAHKESWAGTQV*GLMLISIAGYR
Trigger: CCTATAACCAGCTATCGAGATCAACATCAGGCCCCAGACCTGGGTGCCAGCCCAGCTCTCCTTGTGTGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS CCA 72 bp CCATTCTGGCTGTCTCGATTCCGCCCCTGGATGTCCTaGCTGTCTGAGTTGCTGAGCTTCGGCACACAAGGA +
Preference number: 6 (lower is better)
Translates to: PFWLSRFRPWMS*LSELLSFGTQG
Trigger: TCCTTGTGTGCCGAAGCTCAGCAACTCAGACAGCCAGGACATCCAGGGGCGGAATCGAGACAGCCAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257604.9
ENST00000412615.7
CDS TCA 72 bp TACACCTCACCAGGGACGAGAGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACACGGAGCCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: YTSPGTRGETLS*HTSCRHGASSV
Trigger: GACAGAGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGGTGAGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257604.9
CDS TCA 72 bp TTAGCTCTTCCAGGGACGAGAGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACACGGAGCCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: LALPGTRGETLS*HTSCRHGASSV
Trigger: GACAGAGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGGAAGAGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000547063.5
ENST00000548092.5
ENST00000550051.5
CDS CCA 72 bp GCCCTCCAGAAGTCCTGCTCTGCCACACTGGAGGCTTaGCCTTCATTTTGCAGACTTAGGGCCAACATGAAG +
Preference number: 6 (lower is better)
Translates to: ALQKSCSATLEA*PSFCRLRANMK
Trigger: CTTCATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGCAGAGCAGGACTTCTGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548277.1
ENST00000552890.5
ENST00000552896.1
CDS TCA 72 bp TCTTTCATTTCAGGGACGAGAGGAGAAACGCTGAGTTaGCACACTAGCTGCAGACACGGAGCCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SFISGTRGETLS*HTSCRHGASSV
Trigger: GACAGAGGAGGCTCCGTGTCTGCAGCTAGTGTGTCAACTCAGCGTTTCTCCTCTCGTCCCTGAAATGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549358.5
CDS GCA 72 bp TCCTGCTCTGCCACACTGGAGGCTTGGCCTTCATTTTaGAGACTTAGGGCCAACATGAAGTCCAAGTTTGCA +
Preference number: 6 (lower is better)
Translates to: SCSATLEAWPSF*RLRANMKSKFA
Trigger: TGCAAACTTGGACTTCATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGCCTCCAGTGTGGCAGAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548277.1
ENST00000552890.5
ENST00000552896.1
CDS GCA 72 bp ATTCAGGGTGAGTCTTCAGATCTTTCACAAGGACATTaGGACCACAGTTGCCACATAGTTCCGTCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: IQGESSDLSQGH*DHSCHIVPSGH
Trigger: GTGCCCGGACGGAACTATGTGGCAACTGTGGTCGCAATGTCCTTGTGAAAGATCTGAAGACTCACCCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552890.5
CDS TCA 72 bp AGGCTTGGCCTTCATTTTGCAGACTTAGGGCCAACATaGAGTCCAAGTTTGCACTCTCTTCACCACCCTCTT +
Preference number: 6 (lower is better)
Translates to: RLGLHFADLGPT*SPSLHSLHHPL
Trigger: AAGAGGGTGGTGAAGAGAGTGCAAACTTGGACTTCATGTTGGCCCTAAGTCTGCAAAATGAAGGCCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000548277.1
ENST00000552890.5
ENST00000552896.1
CDS CCA 72 bp TGGATGCTTCCTGACTACAGGAACATGCTCTCTGGCTaGGTTGGTAGAAACTTCACTGTAAAGCTGTACAAA +
Preference number: 6 (lower is better)
Translates to: WMLPDYRNMLSG*VGRNFTVKLYK
Trigger: TTTGTACAGCTTTACAGTGAAGTTTCTACCAACCCAGCCAGAGAGCATGTTCCTGTAGTCAGGAAGCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548092.5
CDS GCA 72 bp TACATTAGAAATGTTACCACCCTCAACTCAAGTCCATaGCTAGCAAATAGTCAAGGTTTACAGGCATCCGGG +
Preference number: 6 (lower is better)
Translates to: YIRNVTTLNSSP*LANSQGLQASG
Trigger: CCCGGATGCCTGTAAACCTTGACTATTTGCTAGGCATGGACTTGAGTTGAGGGTGGTAACATTTCTAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548277.1
CDS CAA 90 bp ATCCTGAACCCTTTCCTCCACCAGTCTGGTCTCTCCACTTCATTTTaGCCTTTCTCACTTAGTTTAGTGGTTCAAAGATCATATCTAAGC +
Preference number: 6 (lower is better)
Translates to: ILNPFLHQSGLSTSF*PFSLSLVVQRSYLS
Trigger: GCTTAGATATGATCTTTGAACCACTAAACTAAGTGAGAAAGGCAAAAATGAAGTGGAGAGACCAGACTGGTGGAGGAAAGGGTTCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548092.5
CDS TCA 72 bp GGTTCCTTACAGGTAGGACACATACCAATGTTCCTTTaGCAGTGGATCTCATGGATGGTAAAGTTAAACACA +
Preference number: 6 (lower is better)
Translates to: GSLQVGHIPMFL*QWISWMVKLNT
Trigger: TGTGTTTAACTTTACCATCCATGAGATCCACTGTCAAAGGAACATTGGTATGTGTCCTACCTGTAAGGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000547063.5
ENST00000548092.5
ENST00000549358.5
ENST00000550051.5
ENST00000552890.5
ENST00000552896.1
CDS CCA 72 bp ATCATATCTAAGCAGTTGTCACACAGTCGAGTTTCCTaGTCATCTAGAAATTCAGCCATCTTTAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: IISKQLSHSRVS*SSRNSAIFSSS
Trigger: GGAAGAGCTAAAGATGGCTGAATTTCTAGATGACCAGGAAACTCGACTGTGTGACAACTGCTTAGATATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548092.5
CDS CAA 72 bp TGGTTCCTTACAGGTAGGACACATACCAATGTTCCTTaGACAGTGGATCTCATGGATGGTAAAGTTAAACAC +
Preference number: 6 (lower is better)
Translates to: WFLTGRTHTNVP*TVDLMDGKVKH
Trigger: GTGTTTAACTTTACCATCCATGAGATCCACTGTCAAAGGAACATTGGTATGTGTCCTACCTGTAAGGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000547063.5
ENST00000548092.5
ENST00000549358.5
ENST00000550051.5
ENST00000552890.5
ENST00000552896.1
CDS CAA 90 bp TTTGGGAAATGGTTCCTTACAGGTAGGACACATACCAATGTTCCTTaGACAGTGGATCTCATGGATGGTAAAGTTAAACACAGGAATTTC +
Preference number: 6 (lower is better)
Translates to: FGKWFLTGRTHTNVP*TVDLMDGKVKHRNF
Trigger: GAAATTCCTGTGTTTAACTTTACCATCCATGAGATCCACTGTCAAAGGAACATTGGTATGTGTCCTACCTGTAAGGAACCATTTCCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000257604.9
ENST00000412615.7
ENST00000547063.5
ENST00000548092.5
ENST00000549358.5
ENST00000550051.5
ENST00000552890.5
ENST00000552896.1
CDS TCA 72 bp TGGCTATTTACAACACTGTCATCATACTCACCATTATaGACCCTAACTATAATCCAATGGAGGTTATTTCCA +
Preference number: 6 (lower is better)
Translates to: WLFTTLSSYSPL*TLTIIQWRLFP
Trigger: TGGAAATAACCTCCATTGGATTATAGTTAGGGTTCATAATGGTGAGTATGATGACAGTGTTGTAAATAGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550051.5