RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000131653

Ensembl transcript IDs: ENST00000326181.11, ENST00000564067.5, ENST00000565383.5, ENST00000567645.2, ENST00000567653.5, ENST00000569686.5, ENST00000570169.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGCGGCTGGCGGAGGTGGCGTCCCGGCGTGCAGGGCCCCTTCCTaGTGTCTCACCCCGTGTTTCCCTGCGAGTGGACGTGCCCAGCTG +
Preference number: 1 (lower is better)
Translates to: EAAGGGGVPACRAPS*CLTPCFPASGRAQL
Trigger: CAGCTGGGCACGTCCACTCGCAGGGAAACACGGGGTGAGACAGCAGGAAGGGGCCCTGCACGCCGGGACGCCACCTCCGCCAGCCGCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 90 bp CGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTaGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGG +
Preference number: 1 (lower is better)
Translates to: RPRARVGLVNVGVSA*QPRGSRACSRPGHG
Trigger: CCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 90 bp TCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTaGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: SRLCLALGGRVLLLA*LRPRARVGLVNVGV
Trigger: CACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 90 bp AGAGGGCGGCACAGGCTGGGCTCCAGCAGGTGGGCAGGGGAGGTCTaGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAG +
Preference number: 1 (lower is better)
Translates to: RGRHRLGSSRWAGEV*ARRCRRLSINSRKQ
Trigger: CTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGACCTCCCCTGCCCACCTGCTGGAGCCCAGCCTGTGCCGCCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 90 bp AGGCTGGGCTCCAGCAGGTGGGCAGGGGAGGTCTGGGCAAGGCGCTaGCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCCTGGCT +
Preference number: 1 (lower is better)
Translates to: RLGSSRWAGEVWARR*RRLSINSRKQRCLA
Trigger: AGCCAGGCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGACCTCCCCTGCCCACCTGCTGGAGCCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 90 bp TCGGGCAGTGAGAATGTGGAGCGCAGAGACATGCTGGACTCTGAGTaGAGGGAGCGGACAGAGATGGCGGAGTCGGAGCGGCGGGGAGTG +
Preference number: 1 (lower is better)
Translates to: SGSENVERRDMLDSE*RERTEMAESERRGV
Trigger: CACTCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCACATTCTCACTGCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 90 bp GCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTaGTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACG +
Preference number: 1 (lower is better)
Translates to: ATRQPCRQWMKSSPI*SATAMLFTTTVSLT
Trigger: CGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 90 bp TTCTCTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTGCCTTaGTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAG +
Preference number: 1 (lower is better)
Translates to: FSPKFSAPQELEVVP*SRRPCPPPGVAASQ
Trigger: CTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGAGAACTTAGGAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 90 bp GCTCCTCCTCCTCCTCGGGCAGTGAGAATGTGGAGCGCAGAGACATaGTGGACTCTGAGTGCAGGGAGCGGACAGAGATGGCGGAGTCGG +
Preference number: 1 (lower is better)
Translates to: APPPPRAVRMWSAET*WTLSAGSGQRWRSR
Trigger: CCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAGGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR CCA 90 bp ACACCAGTGGCTCCGGCTCCTCCTCCTCCTCGGGCAGTGAGAATGTaGAGCGCAGAGACATGCTGGACTCTGAGTGCAGGGAGCGGACAG +
Preference number: 1 (lower is better)
Translates to: TPVAPAPPPPRAVRM*SAETCWTLSAGSGQ
Trigger: CTGTCCGCTCCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAGGAGGAGCCGGAGCCACTGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 90 bp GTGCAGGCAGCCCATCCACCCCAGTGGAGTTCCCACGGACGCTTCTaGTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCC +
Preference number: 1 (lower is better)
Translates to: VQAAHPPQWSSHGRF*SWSKAVLCGHSRPP
Trigger: GGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGCTGCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR TCA 90 bp CCACACGTGGTGATCACGGGGTCTTTGAAGACGCTGCAGCAGAGCTaGCAGCACAGCTTCACCGAGGGCTGCTCCGCAAACACCAGTGGC +
Preference number: 1 (lower is better)
Translates to: PHVVITGSLKTLQQS*QHSFTEGCSANTSG
Trigger: GCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCACCACGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR CCA 90 bp GCAGCCCATCCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATaGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTTTTCC +
Preference number: 1 (lower is better)
Translates to: AAHPPQWSSHGRFCS*SKAVLCGHSRPPFS
Trigger: GGAAAAGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 90 bp CTGCCACCCACAGTCCAGCCACAGGAGCCTCCTTTCTCACAGACTTaGCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTT +
Preference number: 1 (lower is better)
Translates to: LPPTVQPQEPPFSQT*HVCRGLRVSTGALL
Trigger: AAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAAGTCTGTGAGAAAGGAGGCTCCTGTGGCTGGACTGTGGGTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR TCA 90 bp CGATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTaGCGTTGTCCACGGGACACTTCTCTGACTTCAAGGCGCATCTCC +
Preference number: 1 (lower is better)
Translates to: RSARPPRCCSPPRSV*RCPRDTSLTSRRIS
Trigger: GGAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 90 bp CTCACAGACTTGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTaGTCTTCTTCTCCTGTGCCTCACCAGCTCACTGTCAACTCCTCC +
Preference number: 1 (lower is better)
Translates to: LTDLPCLPRPQGIHR*SSSPVPHQLTVNSS
Trigger: GGAGGAGTTGACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAAGTCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CCA 90 bp GCCCCCTTGTCCCGAGGAGCTGTCCCCACTCACAGCCACAGTCTGTaGAGCATTTATTTCAACCAGGAGGTAACCAAATCTACATACAGT +
Preference number: 1 (lower is better)
Translates to: APLSRGAVPTHSHSL*SIYFNQEVTKSTYS
Trigger: ACTGTATGTAGATTTGGTTACCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTCCTCGGGACAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGGGACGGGGAGGGCACTaGCCGGCTGCCAGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLGRGGH*PAARAC
Trigger: ACAGGCTCTGGCAGCCGGGCAGTGCCCTCCCCGTCC...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGTGCAGGGCCCCTTCCTaGTGTCTCACCCCGTGTTTC +
Preference number: 2 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVCRAPS*CLTPCF
Trigger: GAAACACGGGGTGAGACAGCAGGAAGGGGCCCTGCA...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CAA 90 bp CGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTaGGTGAATGTGGGTGTGTCAGCGTGGCAGCCACGTGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: RVLLLAWLRPRARVG*VNVGVSAWQPRGSR
Trigger: CCTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGTGGGCAGGGGAGGTCTaGGCAAGGCGCTGCCGTCGG +
Preference number: 2 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWWAGEV*ARRCRR
Trigger: CCGACGGCAGCGCCTTGCCCAGACCTCCCCTGCCCA...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp ACAGCTTCACCGAGGGCTGCTCCGCAAACACCAGTGGCTCCGGCTCCTCCTCCTGGGAGCGGACAGAGATaGCGGAGTCGGAGCGGCGGG +
Preference number: 2 (lower is better)
Translates to: TASPRAAPQTPVAPAPPPGSGQR*RSRSGG
Trigger: CCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCC...AGGAGGAGGAGCCGGAGCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR CCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAGAAAGGTCCAGGGCTaGTTCAGGGGAAACCACAGC +
Preference number: 2 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVRKVQG*FRGNHS
Trigger: GCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCT...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGGGCAAGCGTCGTACCTaGCACCCAGAGAGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQGKRRT*HPERGW
Trigger: CCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCC...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR TCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGCCCTCCAAGAAGTACTaGCTGGTCTCCTCTATCGTG +
Preference number: 2 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVPSKKY*LVSSIV
Trigger: CACGATAGAGGAGACCAGTCAGTACTTCTTGGAGGG...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTGCCCATCCACCCCAGTaGAGTTCCCACGGACGCTTC +
Preference number: 2 (lower is better)
Translates to: WQPRGSRACSRPGHGLAAAHPPQ*SSHGRF
Trigger: GAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGC...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCGAGGCTCGCCGAGCATaGGACGGGGAGGGCACTGCC +
Preference number: 2 (lower is better)
Translates to: VWARRCRRLSINSRKQRCEARRA*DGEGTA
Trigger: GGCAGTGCCCTCCCCGTCCCATGCTCGGCGAGCCTC...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp CTGAGGCTCACACGGGCTCCTGGGGGTAGGGACCTACCATGCTGTCCTCCTCGTACTCCTCCTGGGACCTaGTTCCCCCAGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LRLTRAPGGRDLPCCPPRTPPGT*FPQEGG
Trigger: TCCTCCCTCCTGGGGGAACCAGGTCCCAGGAGGAGT...ACGAGGAGGACAGCATGGTAGGTCCCTACCCCCAGGAGCCCGTGTGAGCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565383.5
3UTR-3UTR TCA 90 bp GTTGGGACACCGCACAGGCCTGTAGTCACAGCTGCCCTCGTGGTCCTTCCGGGCCCACCACGGTCAGTTTaGCGTTGTCCACGGGACACT +
Preference number: 2 (lower is better)
Translates to: VGTPHRPVVTAALVVLPGPPRSV*RCPRDT
Trigger: AGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGG...GCCCGGAAGGACCACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTTCCCACGGACGCTTCTaGTCATGGTCCAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: WQPRGSRACSRPGHGLAASHGRF*SWSKAV
Trigger: CACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGA...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGATGTGTTGGGGGAGATaGGACTGGAGGCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLMCWGR*DWRPAA
Trigger: AGCTGCTGGCCTCCAGTCCCATCTCCCCCAACACAT...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR TCA 90 bp GCAGAGCTGACAGCACAGCTTCACCGAGGGCTGCTCCGCAAACACCAGTGGCTCCTCCTCCTCGGGCAGTaGGAATGTGGAGCGCAGAGA +
Preference number: 2 (lower is better)
Translates to: AELTAQLHRGLLRKHQWLLLLGQ*ECGAQR
Trigger: TCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAG...GAGCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCTGTGCTGTCAGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp ACAGCTTCACCGAGGGCTGCTCCGCAAACACCAGTGGCTCCGGCTCCTCCTCCTAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: TASPRAAPQTPVAPAPPPRRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...AGGAGGAGGAGCCGGAGCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp GCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCCTCTGACCCAGCTGCCAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: AKYASSWPAGARPSDPAARRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...GGCAGCTGGGTCAGAGGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565383.5
3UTR-3UTR TCA 90 bp CAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGCTGCAGCAGAGCTaGCAGCACAGCTTCACCGAG +
Preference number: 2 (lower is better)
Translates to: QWMKSSPICSATAMLFTTTLQQS*QHSFTE
Trigger: CTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGT...GGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGTGTTTCCCTGCGAGTaGACGTGCCCAGCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVVFPCE*TCPAVP
Trigger: GGGGACAGCTGGGCACGTCCACTCGCAGGGAAACAC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp CCTGCCACCCACAGTCCAGCCACAGGAGCCTCCTTTCTCACAGACTTGCCATGTACTCCTCCTGGGACCTaGTTCCCCCAGGAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: PATHSPATGASFLTDLPCTPPGT*FPQEGG
Trigger: TCCTCCCTCCTGGGGGAACCAGGTCCCAGGAGGAGT...ACATGGCAAGTCTGTGAGAAAGGAGGCTCCTGTGGCTGGACTGTGGGTGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CAA 90 bp CGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTaGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGACACTTC +
Preference number: 2 (lower is better)
Translates to: RQWMKSSPICSATAM*FTTTVSLTLSTGHF
Trigger: GAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCGAGCCTGTCCACCTATaGCCACGGGGCAGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSEPVHL*PRGRQK
Trigger: TTTCTGCCTGCCCCGTGGGCATAGGTGGACAGGCTC...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCGGGCAGCAAGGACAGTaGCGAGTAGAGGGAGGCTCG +
Preference number: 2 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCGQQGQ*RVEGGS
Trigger: CGAGCCTCCCTCTACTCGGCACTGTCCTTGCTGCCC...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCAGCAGCCAGTGCCTGTaGACACCAACCTCAAGGCCA +
Preference number: 2 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSSSQCL*TPTSRP
Trigger: TGGCCTTGAGGTTGGTGTGCACAGGCACTGGCTGCT...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGTCTGGGCAAGGCGCTaGCGTCGGCTGTCAATAAAC +
Preference number: 2 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVVWARR*RRLSIN
Trigger: GTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp GAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCCTCTGACCCAGCTGGCTCTTCTTCTCCTGTaGCTCACCAGCTCACTGTCA +
Preference number: 2 (lower is better)
Translates to: EPNMPHPGLQVPGPLTQLALLLL*LTSSLS
Trigger: TGACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGC...CAGCTGGGTCAGAGGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR-3UTR GCA 90 bp ATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCAGCTTCACCGAGGGCTaGTCCGCAAACACCAGTGGC +
Preference number: 2 (lower is better)
Translates to: ICSATAMLFTTTVSLTLSSFTEG*SANTSG
Trigger: GCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCT...GGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR CCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTGAAAACCAGCGATTGTaGTGTGGGGCGGGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: DASAHGPRLCCVVILALPENQRL*CGAGGG
Trigger: GCCTCCACCCGCCCCACACCACAATCGCTGGTTTTC...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CAA 90 bp CCGATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTaGACGTTGTCCACGGGACACTTCTCTGACTTCAAGGCGCATCTC +
Preference number: 2 (lower is better)
Translates to: PICSATAMLFTTTVS*TLSTGHFSDFKAHL
Trigger: GAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp TCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGAATGCTGGACTCTGAGTaGAGGGAGCGGACAGAGATG +
Preference number: 2 (lower is better)
Translates to: SATAMLFTTTVSLTLSTGMLDSE*RERTEM
Trigger: CATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCAT...TCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp ATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCTGGAGCGCAGAGACATaGTGGACTCTGAGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: ICSATAMLFTTTVSLTLSWSAET*WTLSAG
Trigger: CCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCA...GGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR GCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCTTGGGTGTGACGAGTTaGCTCCTAGCAGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCLGVTS*LLAGRG
Trigger: TCCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAA...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR GCA 90 bp TCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGGGTAGGGACCTACCATaGTGTCCTCCTCGTCCCGCG +
Preference number: 2 (lower is better)
Translates to: SVVSTSLKMEPNMPHPGLGRDLP*CPPRPA
Trigger: CGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACC...CAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565383.5
3UTR-3UTR CCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCGCCTGGCTCACTTTTTaGGGGCACATGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCAWLTF*GHMCWG
Trigger: CCCCCAACACATGTGCCCCCAAAAAGTGAGCCAGGC...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGCACAGCCACAGTCTGTaGAGCATTTATTTCAACCAG +
Preference number: 2 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVHSHSL*SIYFNQ
Trigger: CTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTG...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR TCA 90 bp TGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGATTGTGCTATCCTCCTaGCTGAACTTTCTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: WFPPPLRWSQICLILACRIVLSS*LNFLWF
Trigger: AAACCACAGAAAGTTCAGTCAGGAGGATAGCACAAT...CCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR-3UTR CCA 90 bp AACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGCCACCTCCCTTAAGATaGAGCCAAATATGCCTCATC +
Preference number: 2 (lower is better)
Translates to: NFLWFPPPLRWSQICLILPPPLR*SQICLI
Trigger: GATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGG...CAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CCA 72 bp AACCAGCGATTGTGGTGTGGGGCGGGTGGAGGCGGCTaGCGGAGGTGGCGTCCCGGCGTGCAGGGCCCCTTC +
Preference number: 3 (lower is better)
Translates to: NQRLWCGAGGGG*RRWRPGVQGPF
Trigger: GAAGGGGCCCTGCACGCCGGGACGCCACCTCCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 72 bp GGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTaGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: GCALLSAAVSSS*RGCVPGRGWVW
Trigger: CCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 72 bp TTCCCGCTGCCCGCTACCCGGCAGCCGTGCCGGCAGTaGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCG +
Preference number: 3 (lower is better)
Translates to: FPLPATRQPCRQ*MKSSPICSATA
Trigger: CGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGCGGGCAGCGGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 72 bp GAGGGCACTGCCCGGCTGCCAGAGCCTGTCCACCTATaGCCACGGGGCAGGCAGAAACCCCGAGACCACCCC +
Preference number: 3 (lower is better)
Translates to: EGTARLPEPVHL*PRGRQKPRDHP
Trigger: GGGGTGGTCTCGGGGTTTCTGCCTGCCCCGTGGGCATAGGTGGACAGGCTCTGGCAGCCGGGCAGTGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp GGCGGAGGTGGCGTCCCGGCGTGCAGGGCCCCTTCCTaGTGTCTCACCCCGTGTTTCCCTGCGAGTGGACGT +
Preference number: 3 (lower is better)
Translates to: GGGGVPACRAPS*CLTPCFPASGR
Trigger: ACGTCCACTCGCAGGGAAACACGGGGTGAGACAGCAGGAAGGGGCCCTGCACGCCGGGACGCCACCTCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTaGCTCCTAGCAGGGAGGGGAGGCCCCGGAGTGGGC +
Preference number: 3 (lower is better)
Translates to: MGLEASSLGVTS*LLAGRGGPGVG
Trigger: GCCCACTCCGGGGCCTCCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp AGGCTCACACGGGCTCCTGGGGGTAGGGACCTACCATaGTGTCCTCCTCGTCCCGCGGGGAGTAGGCAAGGG +
Preference number: 3 (lower is better)
Translates to: RLTRAPGGRDLP*CPPRPAGSRQG
Trigger: CCCTTGCCTACTCCCCGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACCCCCAGGAGCCCGTGTGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565383.5
3UTR CCA 72 bp AAATGCCGAAAACCAGCGATTGTGGTGTGGGGCGGGTaGAGGCGGCTGGCGGAGGTGGCGTCCCGGCGTGCA +
Preference number: 3 (lower is better)
Translates to: KCRKPAIVVWGG*RRLAEVASRRA
Trigger: TGCACGCCGGGACGCCACCTCCGCCAGCCGCCTCCACCCGCCCCACACCACAATCGCTGGTTTTCGGCATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CAA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCTGGAGGCCAGCAGCTaGGGTGTGACGAGTTGCCTC +
Preference number: 3 (lower is better)
Translates to: WQPRGSRACSRPGHGLAALEASS*GVTSCL
Trigger: GAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAG...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp CAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTaGTCGGCCACCGCGATGTTGTTCACCACCACGGTC +
Preference number: 3 (lower is better)
Translates to: QPCRQWMKSSPI*SATAMLFTTTV
Trigger: GACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR CAA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCTTGGGTGTGACGAGTaGCCTCCTAGCAGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWLGCDE*PPSREG
Trigger: CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAG...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp AAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTGCCTTaGTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCT +
Preference number: 3 (lower is better)
Translates to: KFSAPQELEVVP*SRRPCPPPGVA
Trigger: AGCCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGAGAACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp CTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTTGTaGCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCG +
Preference number: 3 (lower is better)
Translates to: LLSSLRPKNSRL*LALGGRVLLLA
Trigger: CGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGAGAACTTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 72 bp TCTCCAGGGGCTGTGCAGGCAGCCCATCCACCCCAGTaGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAG +
Preference number: 3 (lower is better)
Translates to: SPGAVQAAHPPQ*SSHGRFCSWSK
Trigger: CTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGCTGCCTGCACAGCCCCTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CCA 72 bp GCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTaGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: ARVGLVNVGVSA*QPRGSRACSRP
Trigger: TGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CAA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTTGCCTGGCTCACTTTTaGGGGGCACATGTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: WQPRGSRACSRPGHGLAACLAHF*GAHVLG
Trigger: CCCCAACACATGTGCCCCCAAAAAGTGAGCCAGGCA...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR-3UTR CAA 90 bp GCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACGGTCAGTTTGACGTaGTCCACGGGACACTTCTCT +
Preference number: 3 (lower is better)
Translates to: ATRQPCRQWMKSSPICSATVSLT*STGHFS
Trigger: AGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGT...GGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR-3UTR CAA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGTGGTCCAAGGCTGTGTaGTGTGGTCATTCTCGCCCT +
Preference number: 3 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQWSKAV*CGHSRP
Trigger: AGGGCGAGAATGACCACACAACACAGCCTTGGACCA...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp TCCAGCAGGTGGGCAGGGGAGGTCTGGGCAAGGCGCTaGCGTCGGCTGTCAATAAACAGCAGGAAACAGAGG +
Preference number: 3 (lower is better)
Translates to: SSRWAGEVWARR*RRLSINSRKQR
Trigger: CCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGACCTCCCCTGCCCACCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp CCTCCTCGGGCAGTGAGAATGTGGAGCGCAGAGACATaGTGGACTCTGAGTGCAGGGAGCGGACAGAGATGG +
Preference number: 3 (lower is better)
Translates to: PPRAVRMWSAET*WTLSAGSGQRW
Trigger: CCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCACATTCTCACTGCCCGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR TCA 72 bp GTGATCACGGGGTCTTTGAAGACGCTGCAGCAGAGCTaGCAGCACAGCTTCACCGAGGGCTGCTCCGCAAAC +
Preference number: 3 (lower is better)
Translates to: VITGSLKTLQQS*QHSFTEGCSAN
Trigger: GTTTGCGGAGCAGCCCTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR CCA 72 bp CCACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATaGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCT +
Preference number: 3 (lower is better)
Translates to: PPQWSSHGRFCS*SKAVLCGHSRP
Trigger: AGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp GCCCATCCACCCCAGTGGAGTTCCCACGGACGCTTCTaGTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCT +
Preference number: 3 (lower is better)
Translates to: AHPPQWSSHGRF*SWSKAVLCGHS
Trigger: AGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR GCA 72 bp TTGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTaGTCTTCTTCTCCTGTGCCTCACCAGCTCACTGTC +
Preference number: 3 (lower is better)
Translates to: LPCLPRPQGIHR*SSSPVPHQLTV
Trigger: GACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR TCA 72 bp CGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTaGCGTTGTCCACGGGACACTTCTCTGACTTCAAGG +
Preference number: 3 (lower is better)
Translates to: RPPRCCSPPRSV*RCPRDTSLTSR
Trigger: CCTTGAAGTCAGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
3UTR GCA 72 bp CCACAGGAGCCTCCTTTCTCACAGACTTGCCATGTCTaGCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTT +
Preference number: 3 (lower is better)
Translates to: PQEPPFSQTCHV*RGLRVSTGALL
Trigger: AAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAAGTCTGTGAGAAAGGAGGCTCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGGGCTTGCAGCTCCTCTaGGGGTGTGCCTGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVGLQLL*GCAWPP
Trigger: AGGGGGCCAGGCACACCCTCAGAGGAGCTGCAAGCC...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGCCAGCGATTGTGGTGTaGGGCGGGTGGAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVPAIVV*GGWRRL
Trigger: CAGCCGCCTCCACCCGCCCCACACCACAATCGCTGG...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGACACAGCCAGCGCGGTaGCACTGCCCTGGTGACGCA +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVTQPAR*HCPGDA
Trigger: TGCGTCACCAGGGCAGTGTCACCGCGCTGGCTGTGT...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTGCAGGGAGCGGACAGAGATGGCGGAGTCGGAGCGGCGGGGAGTGCTGATGGGGCTACCCGGCAGCCGTaGCGGCAGTGGATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VQGADRDGGVGAAGSADGATRQP*RQWMKS
Trigger: GCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC...CCCATCAGCACTCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGGTGAGGAGACCAGCGTaGACACCGGGTTGTCATGGG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVVRRPA*TPGCHG
Trigger: CCCATGACAACCCGGTGTGCACGCTGGTCTCCTCAC...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGTCCTCCTGGCGTGGCTaGGTCCCAGGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLSSWRG*VPGRGW
Trigger: CCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGA...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCCTCGAGGTTGTGCCTTaGTCTCGGCGGCCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGLEVVP*SRRPCP
Trigger: AGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAG...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCGGTCCACCTCAAAGATaGGGGGCTTCCCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ATRQPCRQWMKSSPICSAGPPQR*GASRCP
Trigger: CGGGCAGCGGGAAGCCCCCCATCTTTGAGGTGGACC...GGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGCGAGACCACCCCATGTaGCCAGCCTGGCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVRDHPM*PAWLRK
Trigger: CTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCG...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCCTCTGACCCACGCCAGCCCGCTTCATaGTGCCCCCTCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: DGAKYASSWPAGARPSDPRQPAS*CPLGRR
Trigger: CCGGCGGCCGAGGGGGCATCATGAAGCGGGCTGGCG...TGGGTCAGAGGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGCTCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565383.5
CDS-3UTR TCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGTGCCCACGTGGCCCGTaGGGGTCCGCACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLCPRGP*GSAPAP
Trigger: AGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCA...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCCCATACTCCAGACCCTaGGGGACCGGTCGTAGGATG +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGPYSRP*GTGRRM
Trigger: CATCCTACGACCGGTCCCTCAGGGTCTGGAGTATGG...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGGCTCCTGGGGGTAGGGACCTACCATGCTGTCCTCCTCGTCCCGCGGGGAGTAGGCATCTACGGTCCTTaGGAAGCACCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLLGVGTYHAVLLVPRGVGIYGP*EAPPAR
Trigger: GCGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCC...TACTCCCCGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACCCCCAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565383.5
CDS-3UTR CCA 90 bp GCCCGCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCCTCCGCAAACACCAGTaGCTCCGGCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARYPAAVPAVDEELPDLLLRKHQ*LRLLLL
Trigger: GAGGAGGAGGAGCCGGAGCCACTGGTGTTTGCGGAG...GAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCGCGGGCACTCTTGCCTaGGCTCATGCTCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ATRQPCRQWMKSSPICSAAGTLA*AHALER
Trigger: CCTCTCTAGAGCATGAGCTCAGGCAAGAGTGCCCGC...GGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GCTACCCGGCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCTGTGCTCGCACTCCTTaGGGTGGGCCTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ATRQPCRQWMKSSPICSACARTP*GGPPGS
Trigger: TGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACA...GGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGGGATGTCCCACACAATaGTGGTGCAGTCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVGCPTQ*WCSLQS
Trigger: GCTCTGCAGACTGCACCATCATTGTGTGGGACATCC...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCGAAGAGCACGTTGTGTaGGGAGACCAGCGTGCACAC +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGEEHVV*GDQRAH
Trigger: GTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTC...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCTGTCCCACACGTGGATaGGGTTCTCGTAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGCPTRG*GSRRCH
Trigger: GTGGCACCTACGAGAACCTCATCCACGTGTGGGACA...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGGTGACACTGCCCTGGTaGCGCAGCAGGGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLVTLPW*RSRVCV
Trigger: CACGCAGACCCTGCTGCGTCACCAGGGCAGTGTCAC...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGATGCTGGACTCTGAGTaGAGGGAGCGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVMLDSE*RERTEM
Trigger: CATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCAT...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CCCTCGTGGTCCTTCCGGGCGCTGAGCTTGATGGTGAAGGGGCACCCTCGGGGGAGCTTCACCGAGGGCTaGTCCGCAAACACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSWSFRALSLMVKGHPRGSFTEG*SANTSG
Trigger: GCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCT...CCCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGTGGGGGCATTTGATGTaGTCGCACTCCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVWGHLM*SHSLRW
Trigger: CCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCA...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGGACGGGGAGGGCACTaGCCGGCTGCCAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNGRGGH*PAARAC
Trigger: ACAGGCTCTGGCAGCCGGGCAGTGCCCTCCCCGTCC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGTGGCGTCCCGGCGTaGAGGGCCCCTTCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRGGVPA*RAPSCC
Trigger: ACAGCAGGAAGGGGCCCTGCACGCCGGGACGCCACC...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCAAGAACTCGAGGTTGTaGCTTGCTCTCGGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGKNSRL*LALGGR
Trigger: ACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCTCGCACTCCTTGAGGTaGGCCTCCAGGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGSHSLR*ASRFIL
Trigger: CAGGATGAACCTGGAGGCCCACCTCAAGGAGTGCGA...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTAGGGCCCGCACCCAGTaGTTGAGGCCTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAARARTQ*LRPVSS
Trigger: GGAGCTCACAGGCCTCAACCACTGGGTGCGGGCCCT...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CAA 72 bp TCACAGCTGCCCTCGTGGTCCTTCCGGGCGCTGAGCTaGATGGTGAAGGGGCACCCTCGGGGGTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SQLPSWSFRALS*MVKGHPRGSTS
Trigger: TGAGGTGGACCCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGCAGCTGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GACTCTGAGTGCAGGGAGCGGACAGAGATGGCGGAGTCGGAGCGGCGGGGAGTGGATGGTGGTGACGGCTaGAAAGGCGGGTCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: DSECRERTEMAESERRGVDGGDG*KGGSEG
Trigger: ACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATC...CACTCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GCAGCCGTGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATACGCTGCAGCAGAGCTaGCAGCACAGCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: AAVPAVDEELPDLLGHRDTLQQS*QHSFTE
Trigger: CTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGT...ATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGCGATGTCCCAGACCTTaGTGGCCTTCAGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGRCPRP*WPSGSR
Trigger: GCGGCTCCCTGAAGGCCATCAAGGTCTGGGACATCG...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAGTGCTGCTTGTAGGTaGTGGTCCCGTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVSAACR*WSRQLL
Trigger: CAAAAGCTGACGGGACCAGCACCTACAAGCAGCACT...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGCTACCCGGCAGCCGTaGCGGCAGTGGATGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLATRQP*RQWMKS
Trigger: GCTCTTCATCCACTGCCGGCACGGCTGCCGGGTAGC...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCGCTCCTCTGAGGGTGTaGCTGGCCCCCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPCGQPGSERSRAGSGETAPLRV*LAPSPG
Trigger: CCCTGGAGAGGGGGCCAGGCACACCCTCAGAGGAGC...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCCCCAGGCTGTCTGCCTaGGGTCCTTCCTCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPCGQPGSERSRAGSGETPRLSA*GPSSGQ
Trigger: CTGGCCGGAGGAAGGACCGCAGGCAGACAGCCTGGG...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGCTCCGCAAACACCAGTaGCTCCGGCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGLRKHQ*LRLLLL
Trigger: GAGGAGGAGGAGCCGGAGCCACTGGTGTTTGCGGAG...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAGCCGCGCGTTGATGTaGGACAGCTCGTCATTTAAC +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVSRALM*DSSSFN
Trigger: GTTAAATGACGAGCTGTCCCACATCAACGCGCGGCT...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCAGAGCAGGTCACCCATaGAGTAGACGCAGAGACACC +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGRAGHP*SRRRDT
Trigger: GGTGTCTCTGCGTCTACTCCATGGGTGACCTGCTCT...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCGGAAACAGAGGTGCCTaGCTCACTTTTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGGNRGA*LTFWGH
Trigger: GTGCCCCCAAAAAGTGAGCCAGGCACCTCTGTTTCC...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTGTGGGTGTGTCAGCGTaGCAGCCACGTGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAAVGVSA*QPRGSR
Trigger: CCTGCTTCCACGTGGCTGCCACGCTGACACACCCAC...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCGTCCTCCTCCTGGCGTaGCTGCGTCCCAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSVLLLA*LRPRAR
Trigger: CCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGAC...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCCGCCAGCCCGCTTCATaGTGCCCCCTCGGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCRQPAS*CPLGRR
Trigger: CCGGCGGCCGAGGGGGCATCATGAAGCGGGCTGGCG...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCTCCTCCTCGGGCAGTaGGAATGTGGAGCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAALLLGQ*ECGAQR
Trigger: TCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAG...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGACGCTGCAGCAGAGCTaGCAGCACAGCTTCACCGAG +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQTLQQS*QHSFTE
Trigger: CTCGGTGAAGCTGTGCTGTCAGCTCTGCTGCAGCGT...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGCCTTCAGGGAGCCGCTaGAGAGCACGTTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQPSGSR*RARCVR
Trigger: CCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGG...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGGTCTGGCGTCGAGATaGCCGCCAGGGCATACACGG +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNGLASR*PPGHTR
Trigger: CCGTGTATGCCCTGGCGGTCATCTCGACGCCAGACC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGCTATCCACAGCCCCTaGGAAGAGTCGGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRAIHSP*EESAPG
Trigger: TCCCGGGGCCGACTCTTCTCAGGGGCTGTGGATAGC...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CTGGACTCTGAGTGCAGGGAGCGGACAGAGATGGCGGAGTCGGAGCGGCGGGGAAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LDSECRERTEMAESERRGRRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...TCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAAGAGCTCCCCGATCTaGTCGGCCACCGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLKSSPI*SATAML
Trigger: CAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTT...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTCACAGCTGCCCTCGTGGTCCTTCCGGGCGCTGAGCTTGATGGTGAAGGGGCAGCCTGTAGTCACAGCTaGCCTCGTGGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VTAALVVLPGAELDGEGAACSHS*PRGPSG
Trigger: CCCGGAAGGACCACGAGGGCAGCTGTGACTACAGGC...TGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGCAGCTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGTGGGCCAGAGCCACGTaGATCTCGTGGAAGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQWARAT*ISWKRS
Trigger: TGACCGCTTCCACGAGATGCACGTGGCTCTGGCCCA...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGTCCAAACCTTCACAGTaGTATCCACAGCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVSKPSQ*YPQPLR
Trigger: TCTCAGGGGCTGTGGATAGCACTGTGAAGGTTTGGA...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGGAGCCTGTCCACCTATaGCCACGGGGCAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQEPVHL*PRGRQK
Trigger: TTTCTGCCTGCCCCGTGGGCATAGGTGGACAGGCTC...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGTGCAGGGCCCCTTCCTaGTGTCTCACCCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGCRAPS*CLTPCF
Trigger: GAAACACGGGGTGAGACAGCAGGAAGGGGCCCTGCA...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGCCCTGTGGTGACGTCTaGGGTGGGAAGATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLPCGDV*GGKIAG
Trigger: CCCAGCAATCTTCCCACCCCAGACGTCACCACAGGG...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGAGGGAGCGGACAGAGATaGCGGAGTCGGAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SATAMLFTTTVSLTLSTGGSGQR*RSRSGG
Trigger: CCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCC...TCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGGCCACGTGCATCTCGTaGAAGCGGTCATCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGATCIS*KRSSVC
Trigger: GCAGACGGATGACCGCTTCCACGAGATGCACGTGGC...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGAGGAAGGCGATCTCCTaGTCCTTCTGGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGRKAIS*SFWARA
Trigger: GGCTCTGGCCCAGAAGGACCAGGAGATCGCCTTCCT...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGCACACAGGGCCCTGGTaGCCCACAAAGGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGHTGPW*PTKVPL
Trigger: CAAAGGGACCTTTGTGGGCCACCAGGGCCCTGTGTG...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCCTCTGACCCAGCTGCCGATGGTGGTGACGGCTaGAAAGGCGGGTCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: AKYASSWPAGARPSDPAADGGDG*KGGSEG
Trigger: ACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATC...GGCAGCTGGGTCAGAGGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp GCAGCTGGGGTTGTTGGGACACCGCACAGGCCTGTAGTCACAGCTGCCCTCGTGCTCCTCCTCGGGCAGTaGGAATGTGGAGCGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AAGVVGTPHRPVVTAALVLLLGQ*ECGAQR
Trigger: TCTCTGCGCTCCACATTCTCACTGCCCGAGGAGGAG...CACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGCCACCACGGTCAGTTTaGCGTTGTCCACGGGACACT +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGPPRSV*RCPRDT
Trigger: AGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGG...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTTGTTCCGTGCCGGCAGTGGATaGAGAGCTCCCCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: CRQWMKSSPICSATAMLFRAGSG*RAPRSA
Trigger: AGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACG...GAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGTGTGCTCGCACTCCTTaGGGTGGGCCTCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLCARTP*GGPPGS
Trigger: TGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACA...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTTGTCAGAGGAGCCACTaGAGAGCAGGTCACCCATGG +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAACQRSH*RAGHPW
Trigger: CCATGGGTGACCTGCTCTTCAGTGGCTCCTCTGACA...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCCTCTATCGTGTTTGCTaGTCCACAGTGTTGGGCACA +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGLYRVC*STVLGT
Trigger: TGTGCCCAACACTGTGGATCAGCAAACACGATAGAG...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GCCCTCGTGGTCCTTCCGGGCGCTGAGCTTGATGGTGAAGGGGCACCCTCGGGGAGTGCTGCTTGTAGGTaGTGGTCCCGTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: ALVVLPGAELDGEGAPSGSAACR*WSRQLL
Trigger: CAAAAGCTGACGGGACCAGCACCTACAAGCAGCACT...CCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp GTCACAGCTGCCCTCGTGGTCCTTCCGGGCGCTGAGCTTGATGGTGAAGGGGCAAAGAGCTCCCCGATCTaGTCGGCCACCGCGATGTTG +
Preference number: 4 (lower is better)
Translates to: VTAALVVLPGAELDGEGAKSSPI*SATAML
Trigger: CAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTT...TGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGGCAGCTGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGGTTTGCACCCCTGGATaGAGAGAGCCAGCACGATGC +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQVCTPG*REPARC
Trigger: GCATCGTGCTGGCTCTCTGCATCCAGGGGTGCAAAC...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGGGCAGCAAGGACAGTaGCGAGTAGAGGGAGGCTCG +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNGQQGQ*RVEGGS
Trigger: CGAGCCTCCCTCTACTCGGCACTGTCCTTGCTGCCC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGCCGGGGGCTCCTCCGTaGTTCTCTCCTAAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLPGAPP*FSPKFS
Trigger: AGAGAACTTAGGAGAGAAGCACGGAGGAGCCCCCGG...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCGGCATCTACGGTCCTTaGGAAGCACCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: AMSAEASGYPQVLFFSCAGIYGP*EAPPAR
Trigger: GCGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCC...GGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCAGCCGTGCCGGCAGTaGATGAAGAGCTCCCCGATC +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNQPCRQ*MKSSPI
Trigger: GATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTG...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTTGTTCCAGCCGTGCCGGCAGTaGATGAAGAGCTCCCCGATC +
Preference number: 4 (lower is better)
Translates to: CRQWMKSSPICSATAMLFQPCRQ*MKSSPI
Trigger: GATCGGGGAGCTCTTCATCCACTGCCGGCACGGCTG...GAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGCACACCGGGTTGTCATaGGCCCGGATGGTGTTCACC +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWHTGLS*ARMVFT
Trigger: GGTGAACACCATCCGGGCCCATGACAACCCGGTGTG...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTGACTTTGGTCTGGTCTaGCGTCGAGATGACCGCCAG +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAADFGLV*RRDDRQ
Trigger: CTGGCGGTCATCTCGACGCCAGACCAGACCAAAGTC...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGGCCTGGCTCACTTTTTaGGGGCACATGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQAWLTF*GHMCWG
Trigger: CCCCCAACACATGTGCCCCCAAAAAGTGAGCCAGGC...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTGTGTTTCCCTGCGAGTaGACGTGCCCAGCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPVFPCE*TCPAVP
Trigger: GGGGACAGCTGGGCACGTCCACTCGCAGGGAAACAC...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGCCCATCCACCCCAGTaGAGTTCCCACGGACGCTTC +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNAHPPQ*SSHGRF
Trigger: GAAGCGTCCGTGGGAACTCCACTGGGGTGGATGGGC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTGCCGTGTCCTCCTCCTaGCGTGGCTGCGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DASAHGPRLCCVVILALPAVSSS*RGCVPG
Trigger: CCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGC...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGTTCTGGTCCCTGTGGTaGCGTCTGGGGTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWFWSLW*RLGWED
Trigger: ATCTTCCCACCCCAGACGTCACCACAGGGACCAGAA...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGATGGTGGTGACGGCTaGAAAGGCGGGTCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNDGGDG*KGGSEG
Trigger: ACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGTGTCCTGGTTCCCGATaGACGTGCACCCGTACTTGG +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLCPGSR*TCTRTW
Trigger: CCAAGTACGGGTGCACGTTCATCGGGAACCAGGACA...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCCCACAGACAATGTGGTaGTTTGTCACAGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: MEGGPGQASYLAPREGLGPQTMW*FVTAME
Trigger: CTCCATTGCTGTGACAAATCACCACATTGTCTGTGG...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTCGCGGGTGGGTTTGGTaGATGTGGGTGTGTCAGCGT +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPRGWVW*MWVCQR
Trigger: ACGCTGACACACCCACATTCACCAAACCCACCCGCG...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTTGGGACACCGCACAGGCCTGTAGTCACAGCTGCCCTCGTGGTCCTTCCGGGCATGCTGGACTCTGAGTaGAGGGAGCGGACAGAGATG +
Preference number: 4 (lower is better)
Translates to: VGTPHRPVVTAALVVLPGMLDSE*RERTEM
Trigger: CATCTCTGTCCGCTCCCTGCACTCAGAGTCCAGCAT...GCCCGGAAGGACCACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGTGGAGCGCAGAGACATaGTGGACTCTGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWWSAET*WTLSAG
Trigger: CCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCA...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACAGCTTCACCGAGGGCTaGTCCGCAAACACCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNSFTEG*SANTSG
Trigger: GCCACTGGTGTTTGCGGAGCAGCCCTCGGTGAAGCT...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTCGTAGGAGCCTAGGATaGCCATGTTCAGCCGCGCGT +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPRRSLG*PCSAAR
Trigger: ACGCGCGGCTGAACATGGGCATCCTAGGCTCCTACG...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGAGCCGCTGTAGAGTTTaGACCCCTGGATGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGSRCRV*TPGCRE
Trigger: CTCTCTGCATCCAGGGGTGCAAACTCTACAGCGGCT...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGGTCTGGGCAAGGCGCTaGCGTCGGCTGTCAATAAAC +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWVWARR*RRLSIN
Trigger: GTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCGGCATCTACGGTCCTTaGGAAGCACCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: VWARRCRRLSINSRKQRCGIYGP*EAPPAR
Trigger: GCGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCC...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGGTCCACCTCAAAGATaGGGGGCTTCCCGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVGPPQR*GASRCP
Trigger: CGGGCAGCGGGAAGCCCCCCATCTTTGAGGTGGACC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCGAGGCTCGCCGAGCATaGGACGGGGAGGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCEARRA*DGEGTA
Trigger: GGCAGTGCCCTCCCCGTCCCATGCTCGGCGAGCCTC...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GGCCGTGTCCTCCTCCTGGCGTGGCTGCGTCCCAGGGCGCGGGTGGGTTTGGTGCACAGCCACAGTCTGTaGAGCATTTATTTCAACCAG +
Preference number: 4 (lower is better)
Translates to: GRVLLLAWLRPRARVGLVHSHSL*SIYFNQ
Trigger: CTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTG...CACCAAACCCACCCGCGCCCTGGGACGCAGCCACGCCAGGAGGAGGACACGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGAAAACCAGCGATTGTaGTGTGGGGCGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRENQRL*CGAGGG
Trigger: GCCTCCACCCGCCCCACACCACAATCGCTGGTTTTC...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCGTGCCGGCAGTGGATaGAGAGCTCCCCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSRAGSG*RAPRSA
Trigger: AGCAGATCGGGGAGCTCTTCATCCACTGCCGGCACG...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp GGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGGGCCAGGACGTCAAACTTaGGCTCCAGGCTCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: GTGGQQLGCDELPPSREGPGRQT*APGSSL
Trigger: TAGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCTGG...CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCTGTTCAGCCGCGCGTTaGTGTGGGACAGCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: TPCGQPGSERSRAGSGETCSAAR*CGTARH
Trigger: ATGACGAGCTGTCCCACATCAACGCGCGGCTGAACA...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGGCTCCTGGGGGTAGGGACCTACCATGCTGTCCTCCTCGTCCCGCGGGGAGTATCTTGCCTGAGCTCATaGTCTAGAGAGGCATCTACG +
Preference number: 4 (lower is better)
Translates to: GLLGVGTYHAVLLVPRGVSCLSS*SREAST
Trigger: CGTAGATGCCTCTCTAGAGCATGAGCTCAGGCAAGA...TACTCCCCGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACCCCCAGGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565383.5
CDS-3UTR GCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGCCTGTAGTCACAGCTaGCCTCGTGGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVACSHS*PRGPSG
Trigger: CCCGGAAGGACCACGAGGGCAGCTGTGACTACAGGC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTAGAGAGCCAGCACGATaGCATCATGGCCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPREPAR*HHGPPV
Trigger: CACTGGAGGGCCATGATGGCATCGTGCTGGCTCTCT...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGCTGCCACCAGACGTCTaGAGGACGTGGATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRLPPDV*RTWMQS
Trigger: TGACTGCATCCACGTCCTGCAGACGTCTGGTGGCAG...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCGTGAGGGTCCGCACCTaGTCCTTGGACTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TPCGQPGSERSRAGSGETVRVRT*SLDSMS
Trigger: GGACATTGAGTCCAAGGAGCAGGTGCGGACCCTCAC...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTGCAGCAGGGTCTGCGTaGAGATCATGTTGTCCATAC +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAAAAGSA*RSCCPY
Trigger: GTATGGACAACATGATCTGCACGCAGACCCTGCTGC...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTTTGGGTGTGACGAGTTaGCTCCTAGCAGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPLGVTS*LLAGRG
Trigger: TCCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAA...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCACCCCGTGTTTCCCTaGGAGTGGACGTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSHPVFP*EWTCPA
Trigger: AGCTGGGCACGTCCACTCGCAGGGAAACACGGGGTG...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACTCCCACGGACGCTTCTaGTCATGGTCCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNSHGRF*SWSKAV
Trigger: CACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGA...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTGCCAGGCCACGGGCTTaGAGCTCCTCTGAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: DASAHGPRLCCVVILALPARPRA*SSSEGV
Trigger: CACACCCTCAGAGGAGCTGCAAGCCCGTGGCCTGGC...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATCTGCTCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCGGCATCTACGGTCCTTaGGAAGCACCTCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: ICSATAMLFTTTVSLTLSGIYGP*EAPPAR
Trigger: GCGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCC...GGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGGGGAGCGGACAGAGATaGCGGAGTCGGAGCGGCGGG +
Preference number: 4 (lower is better)
Translates to: ELSPLTATVCGAFISTRRGSGQR*RSRSGG
Trigger: CCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCC...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGGCAGCTGGGGTTGTTaGGACACCGCACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVGSWGC*DTAQAC
Trigger: ACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGCCGGCAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTTGTTCTCGCACTCCTTGAGGTaGGCCTCCAGGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: CRQWMKSSPICSATAMLFSHSLR*ASRFIL
Trigger: CAGGATGAACCTGGAGGCCCACCTCAAGGAGTGCGA...GAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTGCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTGACGTCTGCAGGACGTaGATGCAGTCAAGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPDVCRT*MQSRVR
Trigger: CCGAACCCTTGACTGCATCCACGTCCTGCAGACGTC...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCTACACGGTGCCCACGTaGCCCGTGAGGGTCCGCACC +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCYTVPT*PVRVRT
Trigger: GGTGCGGACCCTCACGGGCCACGTGGGCACCGTGTA...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCATGTGTTGGGGGAGATaGGACTGGAGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TPCGQPGSERSRAGSGETMCWGR*DWRPAA
Trigger: AGCTGCTGGCCTCCAGTCCCATCTCCCCCAACACAT...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGTGGGCAGGGGAGGTCTaGGCAAGGCGCTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: ELSPLTATVCGAFISTRRWAGEV*ARRCRR
Trigger: CCGACGGCAGCGCCTTGCCCAGACCTCCCCTGCCCA...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCAAGGCTGTGTTGTGTaGTCATTCTCGCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: WQPRGSRACSRPGHGLAAQGCVV*SFSPSL
Trigger: AAGGGAGGGCGAGAATGACCACACAACACAGCCTTG...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTTTCCTCCGGCCAGAGTaGAGGCCCCAGGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: DASAHGPRLCCVVILALPFLRPE*RPQAAS
Trigger: GCTAGCAGCCTGGGGCCTCCACTCTGGCCGGAGGAA...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAACTCCTCCTGGGACCTaGTTCCCCCAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SAEASGYPQVLFFSCASPTPPGT*FPQEGG
Trigger: TCCTCCCTCCTGGGGGAACCAGGTCCCAGGAGGAGT...TGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CAA 72 bp TCTCTCCTAAGTTCTCTGCGCCCCAAGAACTCGAGGTaGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLSSLRPKNSR*CLALGGRVLLL
Trigger: CAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGGGCGCAGAGAACTTAGGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGCGGGCACTCTTGCCTaGGCTCATGCTCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVAGTLA*AHALER
Trigger: CCTCTCTAGAGCATGAGCTCAGGCAAGAGTGCCCGC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGCACGGGACACTTCTCTaGCTTCAAGGCGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRHGTLL*LQGASP
Trigger: AGGAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTG...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ATGGGACTGGAGGCCAGCAGCTTGGGTGTGACGAGTTGCCTCCTAGCAGGGAGGCAATGGAGTAGACGCTaGCACCAGACGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: MGLEASSLGVTSCLLAGRQWSRR*HQTSAG
Trigger: TCCTGCAGACGTCTGGTGGCAGCGTCTACTCCATTG...CCTCCCTGCTAGGAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAGTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGAGCAGGAAACAGAGGTaGCTGGCTCACTTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWSRKQR*LAHFLG
Trigger: CCCCAAAAAGTGAGCCAGGCACCTCTGTTTCCTGCT...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTCACTGTCGGTAGGGACCTACCATaGTGTCCTCCTCGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: PQGIHRCSSSPVPHQLTVGRDLP*CPPRPA
Trigger: CGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACC...GACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp CTGAGGCTCACACGGGCTCCTGGGGGTAGGGACCTACCATGCTGTCCTCCTCGTGCTCTTCTTCTCCTGTaGCTCACCAGCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LRLTRAPGGRDLPCCPPRALLLL*LTSSLS
Trigger: TGACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGC...ACGAGGAGGACAGCATGGTAGGTCCCTACCCCCAGGAGCCCGTGTGAGCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565383.5
CDS-3UTR CCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTCACCCGTACTTGGAGTaGGGGCATTTGATGTGCTCG +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPHPYLE*GHLMCS
Trigger: CGAGCACATCAAATGCCCCCACTCCAAGTACGGGTG...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGCTCGTCATTTAACATaGATGCGTCCCGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLARHLT*MRPAGT
Trigger: AGTTCCGGCGGGACGCATCCATGTTAAATGACGAGC...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTAGAAAGGTCCAGGGCTaGTTCAGGGGAAACCACAGC +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPRKVQG*FRGNHS
Trigger: GCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCT...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCCTCTGACCCAGACTGTCAACTCCTCCTaGGACCTGGTTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MEPNMPHPGLQVPGPLTQTVNSS*DLVPPG
Trigger: TCCTGGGGGAACCAGGTCCCAGGAGGAGTTGACAGT...CTGGGTCAGAGGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGCTCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CAA 72 bp CACAGTCCAGCCACAGGAGCCTCCTTTCTCACAGACTaGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGG +
Preference number: 4 (lower is better)
Translates to: HSPATGASFLTD*PCLPRPQGIHR
Trigger: CCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAAGTCTGTGAGAAAGGAGGCTCCTGTGGCTGGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp CCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTCACTGTCGCGGGCACTCTTGCCTaGGCTCATGCTCTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQGIHRCSSSPVPHQLTVAGTLA*AHALER
Trigger: CCTCTCTAGAGCATGAGCTCAGGCAAGAGTGCCCGC...GACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp GACTTCAAGGCGCATCTCCTACAGAACGTGTGCCCACACGTGGTGATCACGGGGCCACCACGGTCAGTTTaGCGTTGTCCACGGGACACT +
Preference number: 4 (lower is better)
Translates to: DFKAHLLQNVCPHVVITGPPRSV*RCPRDT
Trigger: AGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGG...CCCCGTGATCACCACGTGTGGGCACACGTTCTGTAGGAGATGCGCCTTGAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTGGTCGTAGGATGCACTaGAGACTTTGGTCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPGRRMH*RLWSGL
Trigger: CAGACCAGACCAAAGTCTTCAGTGCATCCTACGACC...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACTGTAGCGGGCACTCTTaGCTGAGCTCATGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNCSGHS*LSSCSR
Trigger: TCTAGAGCATGAGCTCAGGCAAGAGTGCCCGCTACA...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSRRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCCGGTCATCCGTCTGCTaGAGAAACTCCTTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VWARRCRRLSINSRKQRCRSSVC*RNSFRP
Trigger: GGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCG...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACTCAACTTCAGCTCAGTaGCCACGATGTCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNSTSAQ*PRCPRP
Trigger: AGGTCTGGGACATCGTGGGCACTGAGCTGAAGTTGA...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTTCTGCAGGACGTGGATaGAGTCAAGGGTTCGGATGT +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPSAGRG*SQGFGC
Trigger: ACATCCGAACCCTTGACTGCATCCACGTCCTGCAGA...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGAGCAGCCAGTGCCTGTaGACACCAACCTCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVSSQCL*TPTSRP
Trigger: TGGCCTTGAGGTTGGTGTGCACAGGCACTGGCTGCT...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCATCTCCTGGTCCTTCTaGGCCAGAGCCACGTGCATC +
Preference number: 4 (lower is better)
Translates to: VWARRCRRLSINSRKQRCISWSF*ARATCI
Trigger: GATGCACGTGGCTCTGGCCCAGAAGGACCAGGAGAT...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGGGCAAGCGTCGTACCTaGCACCCAGAGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELSPLTATVCGAFISTRRGKRRT*HPERGW
Trigger: CCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCC...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAACTGTCAACTCCTCCTaGGACCTGGTTCCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SAEASGYPQVLFFSCASPTVNSS*DLVPPG
Trigger: TCCTGGGGGAACCAGGTCCCAGGAGGAGTTGACAGT...TGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp CCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCCAGGCCAAATATGCCTCATCCTaGCCTGCAGGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PPLRWSQICLILACRCQAKYASS*PAGARP
Trigger: GGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTT...GGCCTGGCACCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp CTGCGTCCCAGGGCGCGGGTGGGTTTGGTGAATGTGGGTGTGTCAGCGTGGCAGTTAATTTATTGGGAATaGGCTGAGGCGGATTTCCCC +
Preference number: 4 (lower is better)
Translates to: LRPRARVGLVNVGVSAWQLIYWE*AEADFP
Trigger: GGGGAAATCCGCCTCAGCTCATTCCCAATAAATTAA...CTGCCACGCTGACACACCCACATTCACCAAACCCACCCGCGCCCTGGGACGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACACGTGGTGATCACGGGGTCTTTGAAGACGCTGCAGCAGAGCTGACAGCACAGTGGAGCGCAGAGACATaGTGGACTCTGAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRGDHGVFEDAAAELTAQWSAET*WTLSAG
Trigger: CCCTGCACTCAGAGTCCAGCATGTCTCTGCGCTCCA...CTGTGCTGTCAGCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCACCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp TCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGATGGGGGCATTTGATGTaGTCGCACTCCTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SATAMLFTTTVSLTLSTGWGHLM*SHSLRW
Trigger: CCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCA...TCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGAATGATGGTGCAGTCTaGAGAGCCGCTGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWNDGAV*RAAVEF
Trigger: AAACTCTACAGCGGCTCTGCAGACTGCACCATCATT...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTAGATGGAGCCAAATATaGCTCATCCTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AEASGYPQVLFFSCASPARWSQI*LILACR
Trigger: CCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCT...AGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp GCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGACACTTCTCTGGCAGCTGGGGTTGTTaGGACACCGCACAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: AMLFTTTVSLTLSTGHFSGSWGC*DTAQAC
Trigger: ACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCC...AGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCAGAGCTTTCCCAGCATaGAGCGCAGGAAGGCGATCT +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSRAFPA*SAGRRS
Trigger: AGATCGCCTTCCTGCGCTCCATGCTGGGAAAGCTCT...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGACCTTCTGCAGGTTCTaGATGTCCCACACAATGATG +
Preference number: 4 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWTFCRF*MSHTMM
Trigger: CATCATTGTGTGGGACATCCAGAACCTGCAGAAGGT...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGTCATGGGCCCGGATaGTGTTCACCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVCHGPG*CSPSAG
Trigger: ACCTGCAGAAGGTGAACACCATCCGGGCCCATGACA...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTCCGCACCTGCTCCTTaGACTCAATGTCCCACACGT +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVSAPAP*TQCPTR
Trigger: ACGTGTGGGACATTGAGTCCAAGGAGCAGGTGCGGA...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
3UTR CAA 72 bp ATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTaGTTCACCACCACGGTCAGTTTGACGTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: MKSSPICSATAM*FTTTVSLTLST
Trigger: CGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCAGGTCCCTTTGCACTTaGAGATCTGCTGAGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSRSLCT*RSAEGR
Trigger: ACGACCCTCAGCAGATCTTCAAGTGCAAAGGGACCT...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGAAACCATTTACCAACTaGAAGGACACGAAGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLKPFTN*KDTKSS
Trigger: GCTAGACTTCGTGTCCTTTCAGTTGGTAAATGGTTT...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CAGTGGATGAAGAGCTCCCCGATCTGCTCGGCCACCGCGATGTTGTTCACCACCTCTTGCCTGAGCTCATaGTCTAGAGAGGCATCTACG +
Preference number: 4 (lower is better)
Translates to: QWMKSSPICSATAMLFTTSCLSS*SREAST
Trigger: CGTAGATGCCTCTCTAGAGCATGAGCTCAGGCAAGA...GGTGGTGAACAACATCGCGGTGGCCGAGCAGATCGGGGAGCTCTTCATCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR GCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGAAGCGGTCATCCGTCTaGTGCAGAAACTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVKRSSV*CRNSFR
Trigger: CCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCTT...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCGGACCGGTCGTAGGATaGACTGAAGACTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSGPVVG*TEDFGL
Trigger: CAGACCAAAGTCTTCAGTGCATCCTACGACCGGTCC...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTCACTGGCTCTTCTTCTCCTGTaGCTCACCAGCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GLRVSTGALLLLCLTSSLALLLL*LTSSLS
Trigger: TGACAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGC...CAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp TGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCAGATGGAGCCAAATATaGCTCATCCTGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CHVCRGLRVSTGALLLLCRWSQI*LILACR
Trigger: CCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCT...GCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTTCTGACACTTGTAGGTaGTACATGTGTCCCACACCT +
Preference number: 4 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPSDTCR*YMCPTP
Trigger: AGGTGTGGGACACATGTACCACCTACAAGTGTCAGA...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCCTGAAGACTTTGGTCTaGTCTGGCGTCGAGATGACC +
Preference number: 4 (lower is better)
Translates to: VWARRCRRLSINSRKQRCLKTLV*SGVEMT
Trigger: GGTCATCTCGACGCCAGACCAGACCAAAGTCTTCAG...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp AACGTGTGCCCACACGTGGTGATCACGGGGTCTTTGAAGACGCTGCAGCAGAGCAGGTCGTTTCCATTCTaGTCTAGAGGGAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: NVCPHVVITGSLKTLQQSRSFPF*SRGRTE
Trigger: CTCCGTCCTCCCTCTAGACCAGAATGGAAACGACCT...GCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCACCACGTGTGGGCACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CCA 90 bp GAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTCACAGGTCGTTTCCATTCTaGTCTAGAGGGAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: EASGYPQVLFFSCASPAHRSFPF*SRGRTE
Trigger: CTCCGTCCTCCCTCTAGACCAGAATGGAAACGACCT...GTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565383.5
CDS-3UTR TCA 90 bp CGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCTTATTGGGAATGAGCTaGGGCGGATTTCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RTLLLMVQGCVVWSFSPSLLGMS*GGFPQR
Trigger: TCTCTGGGGAAATCCGCCTCAGCTCATTCCCAATAA...GGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTCTTGCCTGAGCTCATaGTCTAGAGAGGCATCTACG +
Preference number: 4 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVSCLSS*SREAST
Trigger: CGTAGATGCCTCTCTAGAGCATGAGCTCAGGCAAGA...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR GCA 90 bp GGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCTCACTGTCTTGCCTGAGCTCATaGTCTAGAGAGGCATCTACG +
Preference number: 4 (lower is better)
Translates to: GLRVSTGALLLLCLTSSLSCLSS*SREAST
Trigger: CGTAGATGCCTCTCTAGAGCATGAGCTCAGGCAAGA...CAGTGAGCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp CTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCGGTAGGGACCTACCATaGTGTCCTCCTCGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LSVVSTSLKMEPNMPHPGGRDLP*CPPRPA
Trigger: CGCGGGACGAGGAGGACAGCATGGTAGGTCCCTACC...GCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTTCGCTGAGCTTGCTCTaGTTTTCGTCCAGGACGTCA +
Preference number: 4 (lower is better)
Translates to: DASAHGPRLCCVVILALPSLSLL*FSSRTS
Trigger: TGACGTCCTGGACGAAAACCAGAGCAAGCTCAGCGA...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTAACCACAGCCTGGCCTaGATCCTGTTAGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: DASAHGPRLCCVVILALPNHSLA*ILLASP
Trigger: TGGACTTGCTAACAGGATCCAGGCCAGGCTGTGGTT...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp TGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAGCCCACCTCCCTTAAGATaGAGCCAAATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: CRGLRVSTGALLLLCLTSPPPLR*SQICLI
Trigger: GATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGG...GCTGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CAA 72 bp TCGGCCACCGCGATGTTGTTCACCACCACGGTCAGTTaGACGTTGTCCACGGGACACTTCTCTGACTTCAAG +
Preference number: 4 (lower is better)
Translates to: SATAMLFTTTVS*TLSTGHFSDFK
Trigger: CTTGAAGTCAGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp GCGATGTTGTTCACCACCACGGTCAGTTTGACGTTGTCCACGGGACACTTCTCTCACGGGACACTTCTCTaGCTTCAAGGCGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: AMLFTTTVSLTLSTGHFSHGTLL*LQGASP
Trigger: AGGAGATGCGCCTTGAAGTCAGAGAAGTGTCCCGTG...AGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGTGAACAACATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR TCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCATGTGTCCCACACCTTaGTGGTCTTGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCMCPTP*WSCQRS
Trigger: GCTCCTCTGACAAGACCATCAAGGTGTGGGACACAT...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCATGCTATCCTCCTGACTaGACTTTCTGTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SAEASGYPQVLFFSCASPCYPPD*TFCGFH
Trigger: GTGGAAACCACAGAAAGTTCAGTCAGGAGGATAGCA...TGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp TCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SVVSTSLKMEPNMPHPGLRRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...CAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCAGGCTCTTCTCTAGCTaGTCGATCTTCTCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCRLFSS*SIFSES
Trigger: GCTCTCGGAGAAGATCGACCAGCTAGAGAAGAGCCT...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CCA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCGGACGCTTCTGCTCATaGTCCAAGGCTGTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCGRFCS*SKAVLC
Trigger: ACACAACACAGCCTTGGACCATGAGCAGAAGCGTCC...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp CTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCTTCTGGTCCCTGTGGTaGCGTCTGGGGTGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LSVVSTSLKMEPNMPHPGFWSLW*RLGWED
Trigger: ATCTTCCCACCCCAGACGTCACCACAGGGACCAGAA...GCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567653.5
CDS-3UTR TCA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGCCCTCCAAGAAGTACTaGCTGGTCTCCTCTATCGTG +
Preference number: 4 (lower is better)
Translates to: ELSPLTATVCGAFISTRRPSKKY*LVSSIV
Trigger: CACGATAGAGGAGACCAGTCAGTACTTCTTGGAGGG...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TCCTTTCTCACAGACTTGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTGCTATCCTCCTGACTaGACTTTCTGTGGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SFLTDLPCLPRPQGIHRCCYPPD*TFCGFH
Trigger: GTGGAAACCACAGAAAGTTCAGTCAGGAGGATAGCA...GCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAAGTCTGTGAGAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp TGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGAGTGCTGCTTGTAGGTaGTGGTCCCGTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WFPPPLRWSQICLILACRSAACR*WSRQLL
Trigger: CAAAAGCTGACGGGACCAGCACCTACAAGCAGCACT...CCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp TTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCAGTGCTGCTTGTAGGTaGTGGTCCCGTCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FPPPLRWSQICLILACRCSAACR*WSRQLL
Trigger: CAAAAGCTGACGGGACCAGCACCTACAAGCAGCACT...GCACCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp AACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGACTCCTCCTGGGACCTaGTTCCCCCAGGAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NFLWFPPPLRWSQICLILTPPGT*FPQEGG
Trigger: TCCTCCCTCCTGGGGGAACCAGGTCCCAGGAGGAGT...CAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp TTGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCACCTCCCTTAAGATaGAGCCAAATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: LPCLPRPQGIHRCSSSPVPPPLR*SQICLI
Trigger: GATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGG...CACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp ATCCTCCTGACTGAACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATGATGGTGGTGACGGCTaGAAAGGCGGGTCCGAAGGT +
Preference number: 4 (lower is better)
Translates to: ILLTELSVVSTSLKMEPNDGGDG*KGGSEG
Trigger: ACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATC...ATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTTCAGTCAGGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGGATTTGTCACAGCAATaGAGTAGACGCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: ELSPLTATVCGAFISTRRDLSQQ*SRRCHQ
Trigger: CTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATC...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR TCA 90 bp TTGCCATGTCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGATTGTGCTATCCTCCTaGCTGAACTTTCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LPCLPRPQGIHRCSSSPVIVLSS*LNFLWF
Trigger: AAACCACAGAAAGTTCAGTCAGGAGGATAGCACAAT...CACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGACATGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR GCA 90 bp AACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGAGGAGGAGGGTGTCCTaGAGTGCTGCTTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: NFLWFPPPLRWSQICLILRRRVS*SAACRC
Trigger: GCACCTACAAGCAGCACTGCAGGACACCCTCCTCCT...CAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CCA 90 bp ATCCTCCTGACTGAACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAATAAATATGCCTCATCCTaGCCTGCAGGTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ILLTELSVVSTSLKMEPNKYASS*PAGARP
Trigger: GGGCCTGGCACCTGCAGGCCAGGATGAGGCATATTT...ATTTGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTTCAGTCAGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR TCA 90 bp TTTCCACCTCCCTTAAGATGGAGCCAAATATGCCTCATCCTGGCCTGCAGGTGCATTGTGCTATCCTCCTaGCTGAACTTTCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: FPPPLRWSQICLILACRCIVLSS*LNFLWF
Trigger: AAACCACAGAAAGTTCAGTCAGGAGGATAGCACAAT...GCACCTGCAGGCCAGGATGAGGCATATTTGGCTCCATCTTAAGGGAGGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
3UTR CAA 72 bp CCTCCAAGAAGTACTGACTGGTCTCCTCTATCGTGTTaGCTGATCCACAGTGTTGGGCACAACTTTGACGTT +
Preference number: 4 (lower is better)
Translates to: PPRSTDWSPLSC*LIHSVGHNFDV
Trigger: AACGTCAAAGTTGTGCCCAACACTGTGGATCAGCAAACACGATAGAGGAGACCAGTCAGTACTTCTTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCAGGTCCTCGCTGAGCTaGCTCTGGTTTTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: MEGGPGQASYLAPREGLGRSSLS*LWFSSR
Trigger: CCTGGACGAAAACCAGAGCAAGCTCAGCGAGGACCT...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ATGGAGGGTGGGCCGGGGCAAGCGTCGTACCTGGCACCCAGAGAGGGGCTGGGCATGTTCAGCCGCGCGTaGATGTGGGACAGCTCGTCA +
Preference number: 5 (lower is better)
Translates to: MEGGPGQASYLAPREGLGMFSRA*MWDSSS
Trigger: TGACGAGCTGTCCCACATCAACGCGCGGCTGAACAT...GCCCAGCCCCTCTCTGGGTGCCAGGTACGACGCTTGCCCCGGCCCACCCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 90 bp GCCTGGGCCGCCTCCTGCCCACCCGCCTGTAGGCCCCACTCACAATaGTGGTGCAGTCTGCAGAGCCGCTGTAGAGTTTGCACCCCTGGA +
Preference number: 5 (lower is better)
Translates to: AWAASCPPACRPHSQ*WCSLQSRCRVCTPG
Trigger: TCCAGGGGTGCAAACTCTACAGCGGCTCTGCAGACTGCACCATCATTGTGAGTGGGGCCTACAGGCGGGTGGGCAGGAGGCGGCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570169.1
CDS GCA 90 bp CACCCCGATCCCAGGTATGCAGAGGCCCGGGCAGGCAGGCGGCTCTaGGTCACCGTCCCTCAAGGCTTAGCCTTTCTGAGCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: HPDPRYAEARAGRRL*VTVPQGLAFLSSRR
Trigger: TCTTCGGGAGCTCAGAAAGGCTAAGCCTTGAGGGACGGTGACGCAGAGCCGCCTGCCTGCCCGGGCCTCTGCATACCTGGGATCGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567645.2
CDS CCA 90 bp TGGTCTGGCGTCGAGATGACCGCCAGGGCATACACGGTGCCCACGTaGCCCGTGAGGGTCCGCACCTGCTCCTTGGACTCAATGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WSGVEMTARAYTVPT*PVRVRTCSLDSMSH
Trigger: GTGGGACATTGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCACCGTGTATGCCCTGGCGGTCATCTCGACGCCAGACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp CCCTCGTGGTCCTTCCGGGCGCTGAGCTTGATGGTGAAGGGGCACCCTCGGGGGACCACCACGGTCAGTTaGACGTTGTCCACGGGACAC +
Preference number: 5 (lower is better)
Translates to: PSWSFRALSLMVKGHPRGTTTVS*TLSTGH
Trigger: GTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGT...CCCCCGAGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAAGGACCACGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp GACTCTGAGTGCAGGGAGCGGACAGAGATGGCGGAGTCGGAGCGGCGGGGAGTGTCGGCCACCGCGATGTaGTTCACCACCACGGTCAGT +
Preference number: 5 (lower is better)
Translates to: DSECRERTEMAESERRGVSATAM*FTTTVS
Trigger: ACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA...CACTCCCCGCCGCTCCGACTCCGCCATCTCTGTCCGCTCCCTGCACTCAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGAGCGTGCACACCGGGTaGTCATGGGCCCGGATGGTG +
Preference number: 5 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWSVHTG*SWARMV
Trigger: CACCATCCGGGCCCATGACAACCCGGTGTGCACGCT...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 90 bp AGCCTTTCTGAGCTCCCGAAGAGCCCATCCAGCTCTTCCCCGAGGTaGAGGGACCCCTGCCTGGCTCCCTCTACTCCTCTGGGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSELPKSPSSSSPR*RDPCLAPSTPLGPE
Trigger: CTCAGGACCCAGAGGAGTAGAGGGAGCCAGGCAGGGGTCCCTCCACCTCGGGGAAGAGCTGGATGGGCTCTTCGGGAGCTCAGAAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567645.2
CDS-3UTR CAA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTAGGCATCTACGGTCCTaGGGAAGCACCTCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPRHLRS*GSTSRP
Trigger: CGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCCT...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GCAGCTGGGGTTGTTGGGACACCGCACAGGCCTGTAGTCACAGCTGCCCTCGTGTTCCGGGCGCTGAGCTaGATGGTGAAGGGGCACCCT +
Preference number: 5 (lower is better)
Translates to: AAGVVGTPHRPVVTAALVFRALS*MVKGHP
Trigger: AGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAA...CACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp TGGCAGCCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCGCTGAAGAGCACGTaGTGTGAGGAGACCAGCGTG +
Preference number: 5 (lower is better)
Translates to: WQPRGSRACSRPGHGLAAPLKST*CEETSV
Trigger: CACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGG...AGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 90 bp AAGAGTCGGCCCCGGGACACAGCCAGCGCGGTGACACTGCCCTGGTaGCGCAGCAGGGTCTGCGTGCAGATCATGTTGTCCATACTCCAG +
Preference number: 5 (lower is better)
Translates to: KSRPRDTASAVTLPW*RSRVCVQIMLSILQ
Trigger: CTGGAGTATGGACAACATGATCTGCACGCAGACCCTGCTGCGTCACCAGGGCAGTGTCACCGCGCTGGCTGTGTCCCGGGGCCGACTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 90 bp CCTGAGGGACCGGTCGTAGGATGCACTGAAGACTTTGGTCTGGTCTaGCGTCGAGATGACCGCCAGGGCATACACGGTGCCCACGTGGCC +
Preference number: 5 (lower is better)
Translates to: PEGPVVGCTEDFGLV*RRDDRQGIHGAHVA
Trigger: GGCCACGTGGGCACCGTGTATGCCCTGGCGGTCATCTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATCCTACGACCGGTCCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GACTTCAAGGCGCATCTCCTACAGAACGTGTGCCCACACGTGGTGATCACGGGGGGGCAGCTGGGGTTGTaGGGACACCGCACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: DFKAHLLQNVCPHVVITGGQLGL*GHRTGL
Trigger: CAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCCC...CCCCGTGATCACCACGTGTGGGCACACGTTCTGTAGGAGATGCGCCTTGAAGTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp GCAGCTGGGGTTGTTGGGACACCGCACAGGCCTGTAGTCACAGCTGCCCTCGTGATGTGCTCGCACTCCTaGAGGTGGGCCTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: AAGVVGTPHRPVVTAALVMCSHS*RWASRF
Trigger: GAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACAT...CACGAGGGCAGCTGTGACTACAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGACGATGTCCCAGACCTaGATGGCCTTCAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLTMSQT*MAFREP
Trigger: CGGCTCCCTGAAGGCCATCAAGGTCTGGGACATCGT...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCCTTGGGTGTGACGAGTaGCCTCCTAGCAGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: TPCGQPGSERSRAGSGETLGCDE*PPSREG
Trigger: CCCCTCCCTGCTAGGAGGCAACTCGTCACACCCAAG...GGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGTGCCTGGCTCACTTTTaGGGGGCACATGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLCLAHF*GAHVLG
Trigger: CCCCAACACATGTGCCCCCAAAAAGTGAGCCAGGCA...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 90 bp CCAGACCTTGATGGCCTTCAGGGAGCCGCTGAAGAGCACGTTGTGTaGGGAGACCAGCGTGCACACCGGGTTGTCATGGGCCCGGATGGT +
Preference number: 5 (lower is better)
Translates to: PDLDGLQGAAEEHVV*GDQRAHRVVMGPDG
Trigger: ACCATCCGGGCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATCAAGGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 90 bp CCTGCCCACCCGCCTGTAGGCCCCACTCACAATGATGGTGCAGTCTaGAGAGCCGCTGTAGAGTTTGCACCCCTGGATGCAGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: PAHPPVGPTHNDGAV*RAAVEFAPLDAESQ
Trigger: CTGGCTCTCTGCATCCAGGGGTGCAAACTCTACAGCGGCTCTGCAGACTGCACCATCATTGTGAGTGGGGCCTACAGGCGGGTGGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570169.1
CDS-3UTR CAA 90 bp TCTGCCGAGGCCTCAGGGTATCCACAGGTGCTCTTCTTCTCCTGTGCCTCACCAAGGCATCTACGGTCCTaGGGAAGCACCTCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: SAEASGYPQVLFFSCASPRHLRS*GSTSRP
Trigger: CGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCCT...TGGTGAGGCACAGGAGAAGAAGAGCACCTGTGGATACCCTGAGGCCTCGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS-3UTR CAA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTGGGCAGCTGGGGTTGTaGGGACACCGCACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: DASAHGPRLCCVVILALPGQLGL*GHRTGL
Trigger: CAGGCCTGTGCGGTGTCCCAACAACCCCAGCTGCCC...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 90 bp TTCTGGGCCAGAGCCACGTGCATCTCGTGGAAGCGGTCATCCGTCTaGTGCAGAAACTCCTTCAGGCCCTCGAAGCGGCAAGTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FWARATCISWKRSSV*CRNSFRPSKRQVSR
Trigger: CCTGGAGACTTGCCGCTTCGAGGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCTCTGGCCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 90 bp GAGCGCAGGAAGGCGATCTCCTGGTCCTTCTGGGCCAGAGCCACGTaGATCTCGTGGAAGCGGTCATCCGTCTGCTGCAGAAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: ERRKAISWSFWARAT*ISWKRSSVCCRNSF
Trigger: GAAGGAGTTTCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCTCTGGCCCAGAAGGACCAGGAGATCGCCTTCCTGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACGTGATCACGGGGTCTTaGAAGACGCTGCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNVITGS*KTLQQS
Trigger: GCTCTGCTGCAGCGTCTTCAAAGACCCCGTGATCAC...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTACCACCACGGTCAGTTaGACGTTGTCCACGGGACAC +
Preference number: 5 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPTTTVS*TLSTGH
Trigger: GTGTCCCGTGGACAACGTCAAACTGACCGTGGTGGT...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp CCACGTGGAAGCAGGGCATGTAGCAGGCCAGGCCACGGGCTTGCAGCTCCTCTGCACACCTTGATGGTCTaGTCAGAGGAGCCACTGAAG +
Preference number: 5 (lower is better)
Translates to: PRGSRACSRPGHGLAAPLHTLMV*SEEPLK
Trigger: CTTCAGTGGCTCCTCTGACAAGACCATCAAGGTGTG...CAGAGGAGCTGCAAGCCCGTGGCCTGGCCTGCTACATGCCCTGCTTCCACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GAAACCCCGAGACCACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGATGCACTGAAGACTTaGGTCTGGTCTGGCGTCGAG +
Preference number: 5 (lower is better)
Translates to: ETPRPPHVASLAQKGPGLDALKT*VWSGVE
Trigger: CTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATC...CAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTGGTCTCGGGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GTCTGGGCAAGGCGCTGCCGTCGGCTGTCAATAAACAGCAGGAAACAGAGGTGCCTGGAGGCCAGCAGCTaGGGTGTGACGAGTTGCCTC +
Preference number: 5 (lower is better)
Translates to: VWARRCRRLSINSRKQRCLEASS*GVTSCL
Trigger: GAGGCAACTCGTCACACCCAAGCTGCTGGCCTCCAG...GCACCTCTGTTTCCTGCTGTTTATTGACAGCCGACGGCAGCGCCTTGCCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGGCCGAAAACCAGCGATaGTGGTGTGGGGCGGGTGGA +
Preference number: 5 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVAENQR*WCGAGG
Trigger: TCCACCCGCCCCACACCACAATCGCTGGTTTTCGGC...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 90 bp GGCTCTTCTCTAGCTGGTCGATCTTCTCCGAGAGCTTTCCCAGCATaGAGCGCAGGAAGGCGATCTCCTGGTCCTTCTGGGCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSSLAGRSSPRAFPA*SAGRRSPGPSGPEP
Trigger: TGGCTCTGGCCCAGAAGGACCAGGAGATCGCCTTCCTGCGCTCCATGCTGGGAAAGCTCTCGGAGAAGATCGACCAGCTAGAGAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GGACACTTCTCTGACTTCAAGGCGCATCTCCTACAGAACGTGTGCCCACACGTGAGGCATCTACGGTCCTaGGGAAGCACCTCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: GHFSDFKAHLLQNVCPHVRHLRS*GSTSRP
Trigger: CGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCCT...CACGTGTGGGCACACGTTCTGTAGGAGATGCGCCTTGAAGTCAGAGAAGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS-3UTR CAA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTCGGCCACCGCGATGTaGTTCACCACCACGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVSATAM*FTTTVS
Trigger: ACTGACCGTGGTGGTGAACAACATCGCGGTGGCCGA...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ACCCCAGTGGAGTTCCCACGGACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGATGTGCTCGCACTCCTaGAGGTGGGCCTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TPVEFPRTLLLMVQGCVVMCSHS*RWASRF
Trigger: GAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACAT...CACAACACAGCCTTGGACCATGAGCAGAAGCGTCCGTGGGAACTCCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGCCACACACAGCCCCCTaGTCCCGAGGAGCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: ELSPLTATVCGAFISTRRPHTAP*SRGAVP
Trigger: GGGGACAGCTCCTCGGGACAAGGGGGCTGTGTGTGG...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp CACCCCATGTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACTGGTCCAAGGCTGTGTaGTGTGGTCATTCTCGCCCT +
Preference number: 5 (lower is better)
Translates to: HPMWPAWLRKVQGWFRGNWSKAV*CGHSRP
Trigger: AGGGCGAGAATGACCACACAACACAGCCTTGGACCA...GTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCACATGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GACGCTTCTGCTCATGGTCCAAGGCTGTGTTGTGTGGTCATTCTCGCCCTCCCTCCCAAGAACTCGAGGTaGTGCCTTGCTCTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: DASAHGPRLCCVVILALPPKNSR*CLALGG
Trigger: GCCGCCGAGAGCAAGGCACAACCTCGAGTTCTTGGG...AGGGAGGGCGAGAATGACCACACAACACAGCCTTGGACCATGAGCAGAAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 90 bp TTCCCGATGAACGTGCACCCGTACTTGGAGTGGGGGCATTTGATGTaGTCGCACTCCTTGAGGTGGGCCTCCAGGTTCATCCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: FPMNVHPYLEWGHLM*SHSLRWASRFILSS
Trigger: GCTGCTCAGGATGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAAGTACGGGTGCACGTTCATCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCTTCCGGGCGCTGAGCTaGATGGTGAAGGGGCACCCT +
Preference number: 5 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCFRALS*MVKGHP
Trigger: AGGGTGCCCCTTCACCATCAAGCTCAGCGCCCGGAA...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GTGGCCAGCCTGGCTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTTCCAGGACGTCAAACTaGAGCTCCAGGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VASLAQKGPGLVQGKPQPSRTSN*SSRLFS
Trigger: AGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCTGGA...AGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAGCCAGGCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGTCTCCTCTATCGTGTTaGCTGATCCACAGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWSPLSC*LIHSVG
Trigger: CCCAACACTGTGGATCAGCAAACACGATAGAGGAGA...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp GAGCTGTCCCCACTCACAGCCACAGTCTGTGGAGCATTTATTTCAACCAGGAGGACTCGAGGTTGTGCCTaGCTCTCGGCGGCCGTGTCC +
Preference number: 5 (lower is better)
Translates to: ELSPLTATVCGAFISTRRTRGCA*LSAAVS
Trigger: GGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGT...CCTCCTGGTTGAAATAAATGCTCCACAGACTGTGGCTGTGAGTGGGGACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 90 bp GACACCACACAGGGCCCTGGTGGCCCACAAAGGTCCCTTTGCACTTaGAGATCTGCTGAGGGTCGTAGGAGCCTAGGATGCCCATGTTCA +
Preference number: 5 (lower is better)
Translates to: DTTQGPGGPQRSLCT*RSAEGRRSLGCPCS
Trigger: TGAACATGGGCATCCTAGGCTCCTACGACCCTCAGCAGATCTTCAAGTGCAAAGGGACCTTTGTGGGCCACCAGGGCCCTGTGTGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326181.11
ENST00000570169.1
CDS-3UTR CAA 90 bp GCTATCCTCCTGACTGAACTTTCTGTGGTTTCCACCTCCCTTAAGATGGAGCCAAGGCATCTACGGTCCTaGGGAAGCACCTCCCGCCCG +
Preference number: 5 (lower is better)
Translates to: AILLTELSVVSTSLKMEPRHLRS*GSTSRP
Trigger: CGGGCGGGAGGTGCTTCCCAAGGACCGTAGATGCCT...TGGCTCCATCTTAAGGGAGGTGGAAACCACAGAAAGTTCAGTCAGGAGGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565383.5
ENST00000567653.5
CDS CCA 90 bp CTCAGAAAGGTCCAGGGCTGGTTCAGGGGAAACCACAGCCTGGCCTaGATCCTGTTAGCAAGTCCAAACCTTCACAGTGCTATCCACAGC +
Preference number: 5 (lower is better)
Translates to: LRKVQGWFRGNHSLA*ILLASPNLHSAIHS
Trigger: GCTGTGGATAGCACTGTGAAGGTTTGGACTTGCTAACAGGATCCAGGCCAGGCTGTGGTTTCCCCTGAACCAGCCCTGGACCTTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCTTGGAGTGGGGGCATTaGATGTGCTCGCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCLEWGH*MCSHSL
Trigger: CAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAA...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCAACGTGCACCCGTACTaGGAGTGGGGGCATTTGATG +
Preference number: 5 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCNVHPY*EWGHLM
Trigger: CATCAAATGCCCCCACTCCAAGTACGGGTGCACGTT...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGAACTCGAGGTTGTGCCTTGCTCTCGGCGGCCGTGTCCTCCTCCTGGCGTGGAGACAATGTGGTGATTaGTCACAGCAATGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: KNSRLCLALGGRVLLLAWRQCGD*SQQWSR
Trigger: TCTACTCCATTGCTGTGACAAATCACCACATTGTCT...CCACGCCAGGAGGAGGACACGGCCGCCGAGAGCAAGGCACAACCTCGAGTTCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 90 bp TGCCACAGACAATGTGGTGATTTGTCACAGCAATGGAGTAGACGCTaGCACCAGACGTCTGCAGGACGTGGATGCAGTCAAGGGTTCGGA +
Preference number: 5 (lower is better)
Translates to: CHRQCGDLSQQWSRR*HQTSAGRGCSQGFG
Trigger: TCCGAACCCTTGACTGCATCCACGTCCTGCAGACGTCTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATCACCACATTGTCTGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 90 bp TTTTCGTCCAGGACGTCAAACTTGAGCTCCAGGCTCTTCTCTAGCTaGTCGATCTTCTCCGAGAGCTTTCCCAGCATGGAGCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FSSRTSNLSSRLFSS*SIFSESFPSMERRK
Trigger: CTTCCTGCGCTCCATGCTGGGAAAGCTCTCGGAGAAGATCGACCAGCTAGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCTGGACGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 90 bp GGTTCTCGTAGGTGCCACAGACAATGTGGTGATTTGTCACAGCAATaGAGTAGACGCTGCCACCAGACGTCTGCAGGACGTGGATGCAGT +
Preference number: 5 (lower is better)
Translates to: GSRRCHRQCGDLSQQ*SRRCHQTSAGRGCS
Trigger: ACTGCATCCACGTCCTGCAGACGTCTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATCACCACATTGTCTGTGGCACCTACGAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCACGGTCAGTTTGACGTaGTCCACGGGACACTTCTCT +
Preference number: 5 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCTVSLT*STGHFS
Trigger: AGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGT...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp AAGGACACGAAGTCTAGCTCCGGACAAAAGCTGTTAGAGGCCCAGGCTGTCTGCCATGTGTCCCACACCTaGATGGTCTTGTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: KDTKSSSGQKLLEAQAVCHVSHT*MVLSEE
Trigger: CTCCTCTGACAAGACCATCAAGGTGTGGGACACATG...GCAGACAGCCTGGGCCTCTAACAGCTTTTGTCCGGAGCTAGACTTCGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS-3UTR CAA 90 bp ACCACGGTCAGTTTGACGTTGTCCACGGGACACTTCTCTGACTTCAAGGCGCATACGGTCAGTTTGACGTaGTCCACGGGACACTTCTCT +
Preference number: 5 (lower is better)
Translates to: TTVSLTLSTGHFSDFKAHTVSLT*STGHFS
Trigger: AGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGT...ATGCGCCTTGAAGTCAGAGAAGTGTCCCGTGGACAACGTCAAACTGACCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564067.5
CDS CCA 72 bp CGGTCCTTGGGAAGCACCTCCTGCTGTGGGGCACCGTaGGGCCGCCGCAGCAGCCTTCCACCACCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: RSLGSTSCCGAP*GRRSSLPPPAP
Trigger: CGGGGCTGGTGGTGGAAGGCTGCTGCGGCGGCCCCACGGTGCCCCACAGCAGGAGGTGCTTCCCAAGGACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567645.2
CDS TCA 72 bp CTGAGAAGAGTCGGCCCCGGGACACAGCCAGCGCGGTaGCACTGCCCTGGTGACGCAGCAGGGTCTGCGTGC +
Preference number: 6 (lower is better)
Translates to: LRRVGPGTQPAR*HCPGDAAGSAC
Trigger: GCACGCAGACCCTGCTGCGTCACCAGGGCAGTGTCACCGCGCTGGCTGTGTCCCGGGGCCGACTCTTCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 72 bp CCCCGGGACACAGCCAGCGCGGTGACACTGCCCTGGTaGCGCAGCAGGGTCTGCGTGCAGATCATGTTGTCC +
Preference number: 6 (lower is better)
Translates to: PRDTASAVTLPW*RSRVCVQIMLS
Trigger: GGACAACATGATCTGCACGCAGACCCTGCTGCGTCACCAGGGCAGTGTCACCGCGCTGGCTGTGTCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp GTCGAGATGACCGCCAGGGCATACACGGTGCCCACGTaGCCCGTGAGGGTCCGCACCTGCTCCTTGGACTCA +
Preference number: 6 (lower is better)
Translates to: VEMTARAYTVPT*PVRVRTCSLDS
Trigger: TGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCACCGTGTATGCCCTGGCGGTCATCTCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp GAGCTCCCGAAGAGCCCATCCAGCTCTTCCCCGAGGTaGAGGGACCCCTGCCTGGCTCCCTCTACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: ELPKSPSSSSPR*RDPCLAPSTPL
Trigger: CAGAGGAGTAGAGGGAGCCAGGCAGGGGTCCCTCCACCTCGGGGAAGAGCTGGATGGGCTCTTCGGGAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567645.2
CDS GCA 72 bp TACACGGTGCCCACGTGGCCCGTGAGGGTCCGCACCTaGTCCTTGGACTCAATGTCCCACACGTGGATGAGG +
Preference number: 6 (lower is better)
Translates to: YTVPTWPVRVRT*SLDSMSHTWMR
Trigger: CCTCATCCACGTGTGGGACATTGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCACCGTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 72 bp GTGCCCACGTGGCCCGTGAGGGTCCGCACCTGCTCCTaGGACTCAATGTCCCACACGTGGATGAGGTTCTCG +
Preference number: 6 (lower is better)
Translates to: VPTWPVRVRTCS*DSMSHTWMRFS
Trigger: CGAGAACCTCATCCACGTGTGGGACATTGAGTCCAAGGAGCAGGTGCGGACCCTCACGGGCCACGTGGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 90 bp ATGTCCCAGACCTTGATGGCCTTCAGGGAGCCGCTGAAGAGCACGTaGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCATGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: MSQTLMAFREPLKST*CEETSVHTGLSWAR
Trigger: CCGGGCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATCAAGGTCTGGGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 72 bp GATGGCCTTCAGGGAGCCGCTGAAGAGCACGTTGTGTaGGGAGACCAGCGTGCACACCGGGTTGTCATGGGC +
Preference number: 6 (lower is better)
Translates to: DGLQGAAEEHVV*GDQRAHRVVMG
Trigger: GCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 72 bp GCCTCCTGCCCACCCGCCTGTAGGCCCCACTCACAATaGTGGTGCAGTCTGCAGAGCCGCTGTAGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: ASCPPACRPHSQ*WCSLQSRCRVC
Trigger: GCAAACTCTACAGCGGCTCTGCAGACTGCACCATCATTGTGAGTGGGGCCTACAGGCGGGTGGGCAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570169.1
CDS GCA 72 bp AAGGCGATCTCCTGGTCCTTCTGGGCCAGAGCCACGTaGATCTCGTGGAAGCGGTCATCCGTCTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: KAISWSFWARAT*ISWKRSSVCCR
Trigger: TCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCTCTGGCCCAGAAGGACCAGGAGATCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp CCGGTCGTAGGATGCACTGAAGACTTTGGTCTGGTCTaGCGTCGAGATGACCGCCAGGGCATACACGGTGCC +
Preference number: 6 (lower is better)
Translates to: PVVGCTEDFGLV*RRDDRQGIHGA
Trigger: GGCACCGTGTATGCCCTGGCGGTCATCTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATCCTACGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp CGGCTGAAAAGGCGGGTCCGAAGGTCGTTTCCATTCTaGTCTAGAGGGAGGACGGAGGAGACCCCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: RLKRRVRRSFPF*SRGRTEETPVV
Trigger: CACCACAGGGGTCTCCTCCGTCCTCCCTCTAGACCAGAATGGAAACGACCTTCGGACCCGCCTTTTCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564067.5
ENST00000565383.5
CDS CAA 72 bp CCGATGAACGTGCACCCGTACTTGGAGTGGGGGCATTaGATGTGCTCGCACTCCTTGAGGTGGGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PMNVHPYLEWGH*MCSHSLRWASR
Trigger: CCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAAGTACGGGTGCACGTTCATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 72 bp AGCACGTTGTGTGAGGAGACCAGCGTGCACACCGGGTaGTCATGGGCCCGGATGGTGTTCACCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: STLCEETSVHTG*SWARMVFTFCR
Trigger: CCTGCAGAAGGTGAACACCATCCGGGCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 90 bp CCGCTGAAGAGCACGTTGTGTGAGGAGACCAGCGTGCACACCGGGTaGTCATGGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: PLKSTLCEETSVHTG*SWARMVFTFCRFWM
Trigger: CATCCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 72 bp CAGGGCCCTGGTGGCCCACAAAGGTCCCTTTGCACTTaGAGATCTGCTGAGGGTCGTAGGAGCCTAGGATGC +
Preference number: 6 (lower is better)
Translates to: QGPGGPQRSLCT*RSAEGRRSLGC
Trigger: GCATCCTAGGCTCCTACGACCCTCAGCAGATCTTCAAGTGCAAAGGGACCTTTGTGGGCCACCAGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326181.11
ENST00000570169.1
CDS GCA 72 bp AGAGCCACGTGCATCTCGTGGAAGCGGTCATCCGTCTaGTGCAGAAACTCCTTCAGGCCCTCGAAGCGGCAA +
Preference number: 6 (lower is better)
Translates to: RATCISWKRSSV*CRNSFRPSKRQ
Trigger: TTGCCGCTTCGAGGGCCTGAAGGAGTTTCTGCAGCAGACGGATGACCGCTTCCACGAGATGCACGTGGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 72 bp CCGCCTGTAGGCCCCACTCACAATGATGGTGCAGTCTaGAGAGCCGCTGTAGAGTTTGCACCCCTGGATGCA +
Preference number: 6 (lower is better)
Translates to: PPVGPTHNDGAV*RAAVEFAPLDA
Trigger: TGCATCCAGGGGTGCAAACTCTACAGCGGCTCTGCAGACTGCACCATCATTGTGAGTGGGGCCTACAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570169.1
CDS CCA 72 bp TTGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCATaGGCCCGGATGGTGTTCACCTTCTGCAGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: LCEETSVHTGLS*ARMVFTFCRFW
Trigger: CCAGAACCTGCAGAAGGTGAACACCATCCGGGCCCATGACAACCCGGTGTGCACGCTGGTCTCCTCACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 72 bp TACTTGGAGTGGGGGCATTTGATGTGCTCGCACTCCTaGAGGTGGGCCTCCAGGTTCATCCTGAGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: YLEWGHLMCSHS*RWASRFILSSG
Trigger: CCCGCTGCTCAGGATGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 72 bp GCGTCCCGCCGGAACTCCATGAGGTCCTCGCTGAGCTaGCTCTGGTTTTCGTCCAGGACGTCAAACTTGAGC +
Preference number: 6 (lower is better)
Translates to: ASRRNSMRSSLS*LWFSSRTSNLS
Trigger: GCTCAAGTTTGACGTCCTGGACGAAAACCAGAGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGCGGGACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 72 bp ACCTTGATGGCCTTCAGGGAGCCGCTGAAGAGCACGTaGTGTGAGGAGACCAGCGTGCACACCGGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: TLMAFREPLKST*CEETSVHTGLS
Trigger: TGACAACCCGGTGTGCACGCTGGTCTCCTCACACAACGTGCTCTTCAGCGGCTCCCTGAAGGCCATCAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CAA 90 bp AACATGGATGCGTCCCGCCGGAACTCCATGAGGTCCTCGCTGAGCTaGCTCTGGTTTTCGTCCAGGACGTCAAACTTGAGCTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: NMDASRRNSMRSSLS*LWFSSRTSNLSSRL
Trigger: GAGCCTGGAGCTCAAGTTTGACGTCCTGGACGAAAACCAGAGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGCGGGACGCATCCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 72 bp AACGTGCACCCGTACTTGGAGTGGGGGCATTTGATGTaGTCGCACTCCTTGAGGTGGGCCTCCAGGTTCATC +
Preference number: 6 (lower is better)
Translates to: NVHPYLEWGHLM*SHSLRWASRFI
Trigger: GATGAACCTGGAGGCCCACCTCAAGGAGTGCGAGCACATCAAATGCCCCCACTCCAAGTACGGGTGCACGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp CGCCGGAACTCCATGAGGTCCTCGCTGAGCTTGCTCTaGTTTTCGTCCAGGACGTCAAACTTGAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RRNSMRSSLSLL*FSSRTSNLSSR
Trigger: CCTGGAGCTCAAGTTTGACGTCCTGGACGAAAACCAGAGCAAGCTCAGCGAGGACCTCATGGAGTTCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp GAGCCTAGGATGCCCATGTTCAGCCGCGCGTTGATGTaGGACAGCTCGTCATTTAACATGGATGCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: EPRMPMFSRALM*DSSSFNMDASR
Trigger: GCGGGACGCATCCATGTTAAATGACGAGCTGTCCCACATCAACGCGCGGCTGAACATGGGCATCCTAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326181.11
ENST00000570169.1
CDS TCA 72 bp GCTGGTCCCGTCAGCTTTTGTGATGGTGGTGACGGCTaGAAAGGCGGGTCCGAAGGTCGTTTCCATTCTGGT +
Preference number: 6 (lower is better)
Translates to: AGPVSFCDGGDG*KGGSEGRFHSG
Trigger: ACCAGAATGGAAACGACCTTCGGACCCGCCTTTTCAGCCGTCACCACCATCACAAAAGCTGACGGGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326181.11
ENST00000564067.5
ENST00000565383.5
ENST00000567645.2
ENST00000567653.5
ENST00000569686.5
CDS GCA 72 bp GTCCATACTCCAGACCCTGAGGGACCGGTCGTAGGATaGACTGAAGACTTTGGTCTGGTCTGGCGTCGAGAT +
Preference number: 6 (lower is better)
Translates to: VHTPDPEGPVVG*TEDFGLVWRRD
Trigger: ATCTCGACGCCAGACCAGACCAAAGTCTTCAGTGCATCCTACGACCGGTCCCTCAGGGTCTGGAGTATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS CCA 72 bp GTCCAGGGCTGGTTCAGGGGAAACCACAGCCTGGCCTaGATCCTGTTAGCAAGTCCAAACCTTCACAGTGCT +
Preference number: 6 (lower is better)
Translates to: VQGWFRGNHSLA*ILLASPNLHSA
Trigger: AGCACTGTGAAGGTTTGGACTTGCTAACAGGATCCAGGCCAGGCTGTGGTTTCCCCTGAACCAGCCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS TCA 72 bp CGTAGGAGCCTAGGATGCCCATGTTCAGCCGCGCGTTaGTGTGGGACAGCTCGTCATTTAACATGGATGCGT +
Preference number: 6 (lower is better)
Translates to: RRSLGCPCSAAR*CGTARHLTWMR
Trigger: ACGCATCCATGTTAAATGACGAGCTGTCCCACATCAACGCGCGGCTGAACATGGGCATCCTAGGCTCCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326181.11
ENST00000570169.1
CDS GCA 72 bp AGAGTTTGCACCCCTGGATGCAGAGAGCCAGCACGATaGCATCATGGCCCTCCAGTGTCTTCTGACACTTGT +
Preference number: 6 (lower is better)
Translates to: RVCTPGCREPAR*HHGPPVSSDTC
Trigger: ACAAGTGTCAGAAGACACTGGAGGGCCATGATGGCATCGTGCTGGCTCTCTGCATCCAGGGGTGCAAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326181.11
ENST00000570169.1
CDS CCA 72 bp AGGACGTCAAACTTGAGCTCCAGGCTCTTCTCTAGCTaGTCGATCTTCTCCGAGAGCTTTCCCAGCATGGAG +
Preference number: 6 (lower is better)
Translates to: RTSNLSSRLFSS*SIFSESFPSME
Trigger: CTCCATGCTGGGAAAGCTCTCGGAGAAGATCGACCAGCTAGAGAAGAGCCTGGAGCTCAAGTTTGACGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11
CDS GCA 72 bp CAATGTGGTGATTTGTCACAGCAATGGAGTAGACGCTaGCACCAGACGTCTGCAGGACGTGGATGCAGTCAA +
Preference number: 6 (lower is better)
Translates to: QCGDLSQQWSRR*HQTSAGRGCSQ
Trigger: TTGACTGCATCCACGTCCTGCAGACGTCTGGTGGCAGCGTCTACTCCATTGCTGTGACAAATCACCACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326181.11