RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000175104

Ensembl transcript IDs: ENST00000348124.5, ENST00000526995.6

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCATCCGAGGTTTCACTGCCATTAGGAGCAGGGCTTGTTTTATaGGCTCCGTGCATGCTGATGGTGCAGGGAGTGGTGGAAGATGTG +
Preference number: 1 (lower is better)
Translates to: RPSEVSLPLGAGLVL*APCMLMVQGVVEDV
Trigger: CACATCTTCCACCACTCCCTGCACCATCAGCATGCACGGAGCGCATAAAACAAGCCCTGCTCCTAATGGCAGTGAAACCTCGGATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 90 bp GAACAGCAGCAGTGTAGGTTTCCCTACCTAGAGGGTGGTATGCAGTaGTTCTCAGGCGCTGGTTGGAAGGCACAGCTGAGGGACACAAAC +
Preference number: 1 (lower is better)
Translates to: EQQQCRFPYLEGGMQ*FSGAGWKAQLRDTN
Trigger: GTTTGTGTCCCTCAGCTGTGCCTTCCAACCAGCGCCTGAGAATCACTGCATACCACCCTCTAGGTAGGGAAACCTACACTGCTGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 90 bp AGTCCTTCAATCTTAAGTCAGCCCAGCAATTCAGTTGTATTGACCTaGTGGAGGCCATCCGAGGTTTCACTGCCATTAGGAGCAGGGCTT +
Preference number: 1 (lower is better)
Translates to: SPSILSQPSNSVVLT*WRPSEVSLPLGAGL
Trigger: AAGCCCTGCTCCTAATGGCAGTGAAACCTCGGATGGCCTCCATCAGGTCAATACAACTGAATTGCTGGGCTGACTTAAGATTGAAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 90 bp AAGGCTGATCTAGAACGCTGGCTGGCGACTCTGATTTGGCCTCTCTaGGGGATACAATGTCATCTCTCATTACCAGACAACTTTAAATGG +
Preference number: 1 (lower is better)
Translates to: KADLERWLATLIWPL*GIQCHLSLPDNFKW
Trigger: CCATTTAAAGTTGTCTGGTAATGAGAGATGACATTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 90 bp CTTGAAATTAAGGCTGATCTAGAACGCTGGCTGGCGACTCTGATTTaGCCTCTCTGGGGGATACAATGTCATCTCTCATTACCAGACAAC +
Preference number: 1 (lower is better)
Translates to: LEIKADLERWLATLI*PLWGIQCHLSLPDN
Trigger: GTTGTCTGGTAATGAGAGATGACATTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGCCTTAATTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 90 bp CATTTAGTGAAACAACCAGGCACCTCCTTGCCAAGTGTCCGTTTTTaGCTGAAAGTGAAGGCTGTAATTGAGTGTCACAGTCTGCCAAGA +
Preference number: 1 (lower is better)
Translates to: HLVKQPGTSLPSVRF*LKVKAVIECHSLPR
Trigger: TCTTGGCAGACTGTGACACTCAATTACAGCCTTCACTTTCAGTCAAAAACGGACACTTGGCAAGGAGGTGCCTGGTTGTTTCACTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 90 bp GCACTGAATAGACAAAAAGGGTTACATAGCATAACAATGAGCAGTTaGTATCCACGTGGTTCTCAGCATTATAAACTCTGGGGAAGATGC +
Preference number: 1 (lower is better)
Translates to: ALNRQKGLHSITMSS*YPRGSQHYKLWGRC
Trigger: GCATCTTCCCCAGAGTTTATAATGCTGAGAACCACGTGGATACCAACTGCTCATTGTTATGCTATGTAACCCTTTTTGTCTATTCAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 90 bp TCACAACCTGGGTTGAGAAAGGTCACACTTCTCTACTTACTAAAATaGAGTCCTTCAATCTTAAGTCAGCCCAGCAATTCAGTTGTATTG +
Preference number: 1 (lower is better)
Translates to: SQPGLRKVTLLYLLK*SPSILSQPSNSVVL
Trigger: CAATACAACTGAATTGCTGGGCTGACTTAAGATTGAAGGACTCCATTTTAGTAAGTAGAGAAGTGTGACCTTTCTCAACCCAGGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 90 bp TTTGTTCTTTTTAATCGAAATAAACCAGAGGGTATTCAAAAGAGCTaGAAACTTCTGGCTCACATAGCTTCTGTCACCACCAATGAGATG +
Preference number: 1 (lower is better)
Translates to: FVLFNRNKPEGIQKS*KLLAHIASVTTNEM
Trigger: CATCTCATTGGTGGTGACAGAAGCTATGTGAGCCAGAAGTTTTCAGCTCTTTTGAATACCCTCTGGTTTATTTCGATTAAAAAGAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR GCA 90 bp TTTGATTTCATCAGATCATCTTTCTGGATACTGGGAATTTGTAAGTaGCAAGTACACTCTACAGGCACAAAGACAGAAACAGAGAAACTA +
Preference number: 1 (lower is better)
Translates to: FDFIRSSFWILGICK*QVHSTGTKTETEKL
Trigger: TAGTTTCTCTGTTTCTGTCTTTGTGCCTGTAGAGTGTACTTGGCACTTACAAATTCCCAGTATCCAGAAAGATGATCTGATGAAATCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGCTGGCTGGCGACTCTaGTTTGGCCTCTCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSAGWRL*FGLSGG
Trigger: TCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGGCAGGAGAATGGCTTaGGCCCGGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSGRRMA*AREVEV
Trigger: AACCTCCACCTCCCGGGCTCAAGCCATTCTCCTGCC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 90 bp CTTCTCCTGGGGACTTGCATAGAAGAGAACTATGGTCACTGCTGCTaGGGCGATTGTCCGAGTGGGACAGCACCTACCTTCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: LLLGTCIEENYGHCC*GDCPSGTAPTFRAA
Trigger: TGCAGCTCTGAAGGTAGGTGCTGTCCCACTCGGACAATCGCCCAAGCAGCAGTGACCATAGTTCTCTTCTATGCAAGTCCCCAGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 90 bp GTTTCCCTACCTAGAGGGTGGTATGCAGTGATTCTCAGGCGCTGGTaGGAAGGCACAGCTGAGGGACACAAACTGCCAGGAAGTAATGTG +
Preference number: 2 (lower is better)
Translates to: VSLPRGWYAVILRRW*EGTAEGHKLPGSNV
Trigger: CACATTACTTCCTGGCAGTTTGTGTCCCTCAGCTGTGCCTTCCAACCAGCGCCTGAGAATCACTGCATACCACCCTCTAGGTAGGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCACACTCCCCTGCAGATaGGGTCCTTGGCTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSTLPCR*GPWLSL
Trigger: AAGAGAAAGCCAAGGACCTCATCTGCAGGGGAGTGT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGTTCTGTCACCACCAATaGGATGCCACATGCGCTGAC +
Preference number: 2 (lower is better)
Translates to: VTSHELVVLMVARETRSLFCHHQ*DATCAD
Trigger: GTCAGCGCATGTGGCATCTCATTGGTGGTGACAGAA...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCAACCAGGCACCTCCTTaGCAAGTGTCCGTTTTTGAC +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSNQAPP*QVSVFD
Trigger: GTCAAAAACGGACACTTGGCAAGGAGGTGCCTGGTT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGACACTCGCTGGGGCTaGAAACCACACTCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFDTRWG*KPHSPA
Trigger: TGCAGGGGAGTGTGGTTTTCAGCCCCAGCGAGTGTC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAGGTGGAGGTTGCAGTaGGCCGAGGTTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFRWRLQ*AEVAPL
Trigger: CAGTGGTGCAACCTCGGCTCACTGCAACCTCCACCT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCCACCCAGGCTGGGGGTaGAGTGGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFHPGWG*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACCCCCAGCCTGGGTG...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGCTAATCCTAGTTTGGTaGCCTCCTAGGTATCTCCAA +
Preference number: 2 (lower is better)
Translates to: VTSHELVVLMVARETRSLLILVW*PPRYLQ
Trigger: TTGGAGATACCTAGGAGGTCACCAAACTAGGATTAG...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTTGAGTGTCACAGTCTaGCAAGATCCATCCAATTTG +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSLSVTV*QDPSNL
Trigger: CAAATTGGATGGATCTTGGCAGACTGTGACACTCAA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATACTGATTTGGCCTCTCTaGGGGATACAATGTCATCTC +
Preference number: 2 (lower is better)
Translates to: GVPDETGQYGETRSLLKILIWPL*GIQCHL
Trigger: GAGATGACATTGTATCCCCCAGAGAGGCCAAATCAG...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGCTGGCGACTCTGATTTaGCCTCTCTGGGGGATACAA +
Preference number: 2 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGLATLI*PLWGIQ
Trigger: TTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAG...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAGTTTCATCCAACAGTaGGTTGGACGCTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFSFIQQ*VGRWAW
Trigger: CCACGCCCAGCGTCCAACCCACTGTTGGATGAAACT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCTTCAAGCGATTCCCGTaGCTCAGCCTCCCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFFKRFP*LSLPRS
Trigger: GCTTCTTGGGAGGCTGAGGCACGGGAATCGCTTGAA...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTGAGAACTATGGTCACTaGTGCTTGGGCGATTGTCCG +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFENYGH*CLGDCP
Trigger: CGGACAATCGCCCAAGCAGCAGTGACCATAGTTCTC...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGATAACAATGAGCAGTTaGTATCCACGTGGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: VTSHELVVLMVARETRSLITMSS*YPRGSQ
Trigger: CTGAGAACCACGTGGATACCAACTGCTCATTGTTAT...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCATCTTTCTGGATACTaGGAATTTGTAAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSHLSGY*EFVSAK
Trigger: CTTGGCACTTACAAATTCCCAGTATCCAGAAAGATG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCATGGTCACTGCTGCTTaGGCGATTGTCCGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFMVTAA*AIVRVG
Trigger: TCCCACTCGGACAATCGCCCAAGCAGCAGTGACCAT...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAACTCAAGCTAAGTTGTaGTACAACCACTGTGACTTC +
Preference number: 2 (lower is better)
Translates to: GVPDETGQYGETRSLLKITQAKL*YNHCDF
Trigger: GAAGTCACAGTGGTTGTATCACAACTTAGCTTGAGT...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAGTTGCGGGTCTCCCTaGGAACTAGATTCCACGATA +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFSCGSP*ELDSTI
Trigger: TATCGTGGAATCTAGTTCTCAGGGAGACCCGCAACT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGGGCTAGTGTCCTGCTaGGAAAGCACTCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFGLVSC*ESTLRE
Trigger: TTCTCTCAGAGTGCTTTCTCAGCAGGACACTAGCCC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAACTATGGTCACTGCTaGTTGGGCGATTGTCCGAGT +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFNYGHC*LGDCPS
Trigger: ACTCGGACAATCGCCCAAGCAGCAGTGACCATAGTT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGCTGATCTAGAACGCTaGCTGGCGACTCTGATTTGG +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFADLER*LATLIW
Trigger: CCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCCTGGTCTCGAACTCCTaGCTTCAAGTAATCCGCCAG +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFLVSNS*LQVIRQ
Trigger: CTGGCGGATTACTTGAAGCCAGGAGTTCGAGACCAG...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 90 bp CTGGTTACTTCCAGGATTCTACAGGATCCTTCTCAGAACCTGCAGTaGTTAGGCTACAGCAACATACTCAAGCTAAGTTGTGATACAACC +
Preference number: 2 (lower is better)
Translates to: LVTSRILQDPSQNLQ*LGYSNILKLSCDTT
Trigger: GGTTGTATCACAACTTAGCTTGAGTATGTTGCTGTAGCCTAACAACTGCAGGTTCTGAGAAGGATCCTGTAGAATCCTGGAAGTAACCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAGGGAAAGTTCAAAGTaGCACTCGCTGGGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFRESSK*HSLGLK
Trigger: TTTCAGCCCCAGCGAGTGTCACTTTGAACTTTCCCT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGCTGAGAAAGCACTCTaGGAGAAGAAAAGCAGCACC +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFAEKAL*EKKSST
Trigger: GGTGCTGCTTTTCTTCTCTCAGAGTGCTTTCTCAGC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCTCCCTACCTAGAGGGTaGTATGCAGTGATTCTCAGG +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFSLPRG*YAVILR
Trigger: CCTGAGAATCACTGCATACCACCCTCTAGGTAGGGA...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCATCAGATCATCTTTCTaGATACTGGGAATTTGTAAG +
Preference number: 2 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSIRSSF*ILGICK
Trigger: CTTACAAATTCCCAGTATCCAGAAAGATGATCTGAT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCCCAAGTGTCCGTTTTTaGCTGAAAGTGAAGGCTGTA +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFPSVRF*LKVKAV
Trigger: TACAGCCTTCACTTTCAGTCAAAAACGGACACTTGG...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCTTCTCCTGGGGACTTaGATAGAAGAGAACTATGGT +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFLLLGT*IEENYG
Trigger: ACCATAGTTCTCTTCTATGCAAGTCCCCAGGAGAAG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGCAGCATTATAAACTCTaGGGAAGATGCTACTTCGTA +
Preference number: 2 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGQHYKL*GRCYFV
Trigger: TACGAAGTAGCATCTTCCCCAGAGTTTATAATGCTG...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 90 bp AGGTGCCTTTTTGAGATAAGTGTGAATCCACATTCACAACCTGGGTaGAGAAAGGTCACACTTCTCTACTTACTAAAATGGAGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: RCLFEISVNPHSQPG*RKVTLLYLLKWSPS
Trigger: TGAAGGACTCCATTTTAGTAAGTAGAGAAGTGTGACCTTTCTCAACCCAGGTTGTGAATGTGGATTCACACTTATCTCAAAAAGGCACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTGGTTGGAACTTAATTTaGGACAGAATGTTATGGCTG +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFGWNLI*DRMLWL
Trigger: CAGCCATAACATTCTGTCTCAAATTAAGTTCCAACC...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGCCTATTAGGAAAATCTaGTTACTTCCAGGATTCTAC +
Preference number: 2 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGPIRKI*LLPGFY
Trigger: GTAGAATCCTGGAAGTAACCAGATTTTCCTAATAGG...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTTTTGGAATGACAGCTTaGCTATTCTACTTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFFGMTA*LFYFVV
Trigger: GACTACAAAGTAGAATAGTCAAGCTGTCATTCCAAA...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGCTTGTATACCCAACTaGGTGAAACTAGCATGTTTA +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFACIPN*VKLACL
Trigger: TAAACATGCTAGTTTCACTCAGTTGGGTATACAAGC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAAACTCTGGGGAAGATaGTACTTCGTAACCTCAAGG +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQKLWGR*YFVTSR
Trigger: CCTTGAGGTTACGAAGTAGCATCTTCCCCAGAGTTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGCTGGGAATTTGTAAGTaGCAAGTACACTCTACAGGC +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQLGICK*QVHSTG
Trigger: GCCTGTAGAGTGTACTTGGCACTTACAAATTCCCAG...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTTCCATCATGTCAATCTaGGAGTTTAGAAAAAGCACA +
Preference number: 2 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFSIMSI*EFRKST
Trigger: TGTGCTTTTTCTAAACTCCCAGATTGACATGATGGA...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAAATTCACTCTGCACTaGATAGACAAAAAGGGTTAC +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFKFTLH*IDKKGY
Trigger: GTAACCCTTTTTGTCTATTCAGTGCAGAGTGAATTT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGACATATGCAGAGCTGTaGAATTCACTCTGCACTGAA +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQTYAEL*NSLCTE
Trigger: TTCAGTGCAGAGTGAATTTCACAGCTCTGCATATGT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAACAAGGTCTCTGCTTaGCTTTTATTTTCACTCCAT +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFNKVSA*LLFSLH
Trigger: ATGGAGTGAAAATAAAAGTCAAGCAGAGACCTTGTT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAGCAATGTCCCAGAATaGTGCCAAAAGATAAATATG +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFSNVPE*CQKINM
Trigger: CATATTTATCTTTTGGCATCATTCTGGGACATTGCT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTCCTTAGTAACAACCTaGAGGAAAAACTGGGGTGAA +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQSLVTT*RKNWGE
Trigger: TTCACCCCAGTTTTTCCTCCAGGTTGTTACTAAGGA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGACCCGAATTTCCTGTaGGGAAAAAGCTTTAAAATA +
Preference number: 2 (lower is better)
Translates to: HSTACHTVYRIMRILPGFDPNFL*GKSFKI
Trigger: TATTTTAAAGCTTTTTCCCCACAGGAAATTCGGGTC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGGGTATTCAAAAGAGCTaGAAACTTCTGGCTCACATA +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQGIQKS*KLLAHI
Trigger: TATGTGAGCCAGAAGTTTTCAGCTCTTTTGAATACC...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAAAATTAGCTTAACGTaGGGGCTGCAATTCCAGTTA +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQKISLT*GLQFQL
Trigger: TAACTGGAATTGCAGCCCTCACGTTAAGCTAATTTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGTATTGTCATTGTTCTaGTGGTTGGAACTTAATTTG +
Preference number: 2 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFVLSLF*WLELNL
Trigger: CAAATTAAGTTCCAACCAGCAGAACAATGACAATAC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 90 bp ACTGGATGTCTTTCAATTTTCAAAAGTCAGATTTCATTCCACAGCTaGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAC +
Preference number: 2 (lower is better)
Translates to: TGCLSIFKSQISFHS*SYSLQNYENPPWIH
Trigger: GTGAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATGAAATCTGACTTTTGAAAATTGAAAGACATCCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTGGTTTATGACAAAATaGCAAATGTTGGGGGTTAAA +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQWFMTK*QMLGVK
Trigger: TTTAACCCCCAACATTTGGCATTTTGTCATAAACCA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAACACGAGAATATTCTaGACAATTTATCAAGGACCT +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQNTRIF*TIYQGP
Trigger: AGGTCCTTGATAAATTGTGCAGAATATTCTCGTGTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGGTTTTCCAAGGATTATaGTTCAAATCCTCTGAAATC +
Preference number: 2 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQVFQGL*FKSSEI
Trigger: GATTTCAGAGGATTTGAACCATAATCCTTGGAAAAC...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCTGCTGCTTGGGCGATaGTCCGAGTGGGACAGCACC +
Preference number: 3 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSLLLGR*SEWDST
Trigger: GGTGCTGTCCCACTCGGACAATCGCCCAAGCAGCAG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp CAGTGTAGGTTTCCCTACCTAGAGGGTGGTATGCAGTaGTTCTCAGGCGCTGGTTGGAAGGCACAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: QCRFPYLEGGMQ*FSGAGWKAQLR
Trigger: CCTCAGCTGTGCCTTCCAACCAGCGCCTGAGAATCACTGCATACCACCCTCTAGGTAGGGAAACCTACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR GCA 72 bp CTGGGGACTTGCATAGAAGAGAACTATGGTCACTGCTaGTTGGGCGATTGTCCGAGTGGGACAGCACCTACC +
Preference number: 3 (lower is better)
Translates to: LGTCIEENYGHC*LGDCPSGTAPT
Trigger: GGTAGGTGCTGTCCCACTCGGACAATCGCCCAAGCAGCAGTGACCATAGTTCTCTTCTATGCAAGTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR GCA 72 bp GAGGTTTCACTGCCATTAGGAGCAGGGCTTGTTTTATaGGCTCCGTGCATGCTGATGGTGCAGGGAGTGGTG +
Preference number: 3 (lower is better)
Translates to: EVSLPLGAGLVL*APCMLMVQGVV
Trigger: CACCACTCCCTGCACCATCAGCATGCACGGAGCGCATAAAACAAGCCCTGCTCCTAATGGCAGTGAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTATGGTCACTGCTGCTaGGGCGATTGTCCGAGTGGG +
Preference number: 3 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSYGHCC*GDCPSG
Trigger: CCCACTCGGACAATCGCCCAAGCAGCAGTGACCATA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp AGCAAAGGGAAAGTTCAAAGTGACACTCGCTGGGGCTaGAAACCACACTCCCCTGCAGATGAGGTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: SKGKVQSDTRWG*KPHSPADEVLG
Trigger: GCCAAGGACCTCATCTGCAGGGGAGTGTGGTTTTCAGCCCCAGCGAGTGTCACTTTGAACTTTCCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 72 bp CTAGAACGCTGGCTGGCGACTCTGATTTGGCCTCTCTaGGGGATACAATGTCATCTCTCATTACCAGACAAC +
Preference number: 3 (lower is better)
Translates to: LERWLATLIWPL*GIQCHLSLPDN
Trigger: GTTGTCTGGTAATGAGAGATGACATTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGCGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGCCAAGTGTCCGTTTTaGACTGAAAGTGAAGGCTGT +
Preference number: 3 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSAKCPF*TESEGC
Trigger: ACAGCCTTCACTTTCAGTCAAAAACGGACACTTGGC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp AACTTCCCCATCTTAAAGGCAGGGCTAGTGTCCTGCTaGGAAAGCACTCTGAGAGAAGAAAAGCAGCACCAC +
Preference number: 3 (lower is better)
Translates to: NFPILKAGLVSC*ESTLREEKQHH
Trigger: GTGGTGCTGCTTTTCTTCTCTCAGAGTGCTTTCTCAGCAGGACACTAGCCCTGCCTTTAAGATGGGGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 72 bp AAGGCTGATCTAGAACGCTGGCTGGCGACTCTGATTTaGCCTCTCTGGGGGATACAATGTCATCTCTCATTA +
Preference number: 3 (lower is better)
Translates to: KADLERWLATLI*PLWGIQCHLSL
Trigger: TAATGAGAGATGACATTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 72 bp TGGCTTTCTCTTGAAATTAAGGCTGATCTAGAACGCTaGCTGGCGACTCTGATTTGGCCTCTCTGGGGGATA +
Preference number: 3 (lower is better)
Translates to: WLSLEIKADLER*LATLIWPLWGI
Trigger: TATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGCCTTAATTTCAAGAGAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGCTGGCGACTCTGATTaGGCCTCTCTGGGGGATACA +
Preference number: 3 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFAGDSD*ASLGDT
Trigger: TGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTTACAGATGGGAAGCTaGCTAAAAGCTGAAATTAGG +
Preference number: 3 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSLQMGS*LKAEIR
Trigger: CCTAATTTCAGCTTTTAGCAAGCTTCCCATCTGTAA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCATTTCCTTAAGGCATaGCACTGTTTAGGTTGTAAG +
Preference number: 3 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSHFLKA*HCLGCK
Trigger: CTTACAACCTAAACAGTGCAATGCCTTAAGGAAATG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp AAAACTTCTGGCTCACATAGCTTCTGTCACCACCAATaGGATGCCACATGCGCTGACTACTTGGGTCACTTT +
Preference number: 3 (lower is better)
Translates to: KTSGSHSFCHHQ*DATCADYLGHF
Trigger: AAAGTGACCCAAGTAGTCAGCGCATGTGGCATCTCATTGGTGGTGACAGAAGCTATGTGAGCCAGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGATTCTCAGGCGCTGGTaGGAAGGCACAGCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQILRRW*EGTAEG
Trigger: TCCCTCAGCTGTGCCTTCCAACCAGCGCCTGAGAAT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTGGAAATGACTCCTCTTaGTATCTAATGCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFGNDSS*YLMHSQ
Trigger: CTGGCTGTGCATTAGATACAAAGAGGAGTCATTTCC...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCATAACAATGAGCAGTaGGTATCCACGTGGTTCTCA +
Preference number: 3 (lower is better)
Translates to: HSTACHTVYRIMRILPGFHNNEQ*VSTWFS
Trigger: TGAGAACCACGTGGATACCAACTGCTCATTGTTATG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTTCATTGTTCTGCTGGTaGGAACTTAATTTGAGACAG +
Preference number: 3 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFSLFCW*ELNLRQ
Trigger: CTGTCTCAAATTAAGTTCCAACCAGCAGAACAATGA...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTCTCAGAACCTGCAGTaGTTAGGCTACAGCAACATA +
Preference number: 3 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQSQNLQ*LGYSNI
Trigger: TATGTTGCTGTAGCCTAACAACTGCAGGTTCTGAGA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGATATCATTTCCTTTTTaGAGCTGGGGGCGTGGAGAT +
Preference number: 3 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQISFPF*SWGRGD
Trigger: ATCTCCACGCCCCCAGCTCAAAAAAGGAAATGATAT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp TTTAATCGAAATAAACCAGAGGGTATTCAAAAGAGCTaGAAACTTCTGGCTCACATAGCTTCTGTCACCACC +
Preference number: 3 (lower is better)
Translates to: FNRNKPEGIQKS*KLLAHIASVTT
Trigger: GGTGGTGACAGAAGCTATGTGAGCCAGAAGTTTTCAGCTCTTTTGAATACCCTCTGGTTTATTTCGATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CCA 72 bp AGACAAAAAGGGTTACATAGCATAACAATGAGCAGTTaGTATCCACGTGGTTCTCAGCATTATAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: RQKGLHSITMSS*YPRGSQHYKLW
Trigger: CCAGAGTTTATAATGCTGAGAACCACGTGGATACCAACTGCTCATTGTTATGCTATGTAACCCTTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCTGGTTGGAACTTAATTaGAGACAGAATGTTATGGCT +
Preference number: 3 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFWLELN*RQNVMA
Trigger: AGCCATAACATTCTGTCTCAAATTAAGTTCCAACCA...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR-3UTR CAA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAACATTCAGACTTGTTaGCCAACAGCAAAATGTATG +
Preference number: 3 (lower is better)
Translates to: HSTACHTVYRIMRILPGFNIQTC*PTAKCM
Trigger: CATACATTTTGCTGTTGGCAAACAAGTCTGAATGTT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR TCA 72 bp AAAGTAACATCTGCGCCTTACCATCTAAAATTTACATaGCAAGGTACCAGAAATTGGTCAGCTTCAACTGCT +
Preference number: 3 (lower is better)
Translates to: KVTSAPYHLKFT*QGTRNWSASTA
Trigger: AGCAGTTGAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCAGATGTTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAGCGCTCCGTGCATGCTaGTGGTGCAGGGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIALRAC*WCREWW
Trigger: CCACCACTCCCTGCACCATCAGCATGCACGGAGCGC...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAGACGGACACAGACACTaGGCGCCGAGACGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIDGHRH*APRRGC
Trigger: GCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGTC...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGGACACTCGCTGGGGCTaGAAACCACACTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLDTRWG*KPHSPA
Trigger: TGCAGGGGAGTGTGGTTTTCAGCCCCAGCGAGTGTC...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTTCTCAGGCGCTGGTTaGAAGGCACAGCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSFSGAG*KAQLRD
Trigger: GTCCCTCAGCTGTGCCTTCCAACCAGCGCCTGAGAA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGGGCTAGTGTCCTGCTaGGAAAGCACTCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSGLVSC*ESTLRE
Trigger: TTCTCTCAGAGTGCTTTCTCAGCAGGACACTAGCCC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGCAGGGCTTGTTTTATaGGCTCCGTGCATGCTGATG +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSAGLVL*APCMLM
Trigger: CATCAGCATGCACGGAGCGCATAAAACAAGCCCTGC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGAGGTGGAGGTTGCAGTaGGCCGAGGTTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGRWRLQ*AEVAPL
Trigger: CAGTGGTGCAACCTCGGCTCACTGCAACCTCCACCT...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATATTCAAGCGATTCCCGTaGCTCAGCCTCCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIFKRFP*LSLPRS
Trigger: GCTTCTTGGGAGGCTGAGGCACGGGAATCGCTTGAA...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAAAACTCTGGATCCAGTaGGAGCCTTCGCCACCTTCG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIKLWIQ*EPSPPS
Trigger: CGAAGGTGGCGAAGGCTCCCACTGGATCCAGAGTTT...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGCTGGCGACTCTGATTTaGCCTCTCTGGGGGATACAA +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLLATLI*PLWGIQ
Trigger: TTGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAG...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGTGGTGCAGGGAGTGGTaGAAGATGTGCCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLWCREW*KMCHLK
Trigger: TTTGAGGTGGCACATCTTCCACCACTCCCTGCACCA...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGAGGGAAAGTTCAAAGTaGCACTCGCTGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLRESSK*HSLGLK
Trigger: TTTCAGCCCCAGCGAGTGTCACTTTGAACTTTCCCT...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGGCGGGCGGATCATCTaGGGTCAGGAGTTCCAGACG +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFGGRII*GQEFQT
Trigger: CGTCTGGAACTCCTGACCTCAGATGATCCGCCCGCC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGGCTGAGAAAGCACTCTaGGAGAAGAAAAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLAEKAL*EKKSST
Trigger: GGTGCTGCTTTTCTTCTCTCAGAGTGCTTTCTCAGC...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGCGCCGAGACGAGGCTaGTTGGACGGCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFAPRRG*LDGKLW
Trigger: CCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCGGCGC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAGCTGATCTAGAACGCTaGCTGGCGACTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIADLER*LATLIW
Trigger: CCAAATCAGAGTCGCCAGCCAGCGTTCTAGATCAGC...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGGGGCGATTGTCCGAGTaGGACAGCACCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGGRLSE*DSTYLQ
Trigger: CTGAAGGTAGGTGCTGTCCCACTCGGACAATCGCCC...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAAGTTGCGGGTCTCCCTaGGAACTAGATTCCACGATA +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKISCGSP*ELDSTI
Trigger: TATCGTGGAATCTAGTTCTCAGGGAGACCCGCAACT...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGGAAGACAAAACTGATTaGCCCATGGTCAGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLEDKTD*PMVSQE
Trigger: CTCCTGACTGACCATGGGTCAATCAGTTTTGTCTTC...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCTGGGAATTTGTAAGTaGCAAGTACACTCTACAGGC +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSLGICK*QVHSTG
Trigger: GCCTGTAGAGTGTACTTGGCACTTACAAATTCCCAG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGGTGATTCTCAGGCGCTaGTTGGAAGGCACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGVILRR*LEGTAE
Trigger: CTCAGCTGTGCCTTCCAACCAGCGCCTGAGAATCAC...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGATGGTCACTGCTGCTTaGGCGATTGTCCGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGMVTAA*AIVRVG
Trigger: TCCCACTCGGACAATCGCCCAAGCAGCAGTGACCAT...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCAAGGTACCAGAAATTaGTCAGCTTCAACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSQGTRN*SASTAA
Trigger: AGCAGCAGTTGAAGCTGACCAATTTCTGGTACCTTG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGACACTCCCCTGCAGATaGGGTCCTTGGCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGTLPCR*GPWLSL
Trigger: AAGAGAAAGCCAAGGACCTCATCTGCAGGGGAGTGT...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGAGGGTGGTATGCAGTaGTTCTCAGGCGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFEGGMQ*FSGAGW
Trigger: CCAACCAGCGCCTGAGAATCACTGCATACCACCCTC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGGGCAGGAGAATGGCTTaGGCCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQGRRMA*AREVEV
Trigger: AACCTCCACCTCCCGGGCTCAAGCCATTCTCCTGCC...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCATAATGAGTAGAACTTaGGGCAAGCCAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSIMSRT*GKPREQ
Trigger: CTGTTCTCTTGGCTTGCCTCAAGTTCTACTCATTAT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGACACGAAGACAAAACTaGTTGACCCATGGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLTRRQN*LTHGQS
Trigger: TGACTGACCATGGGTCAATCAGTTTTGTCTTCGTGT...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGCCGGGAGGTGGAGGTTaGAGTGAGCCGAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQPGGGG*SEPRLH
Trigger: GTGCAACCTCGGCTCACTGCAACCTCCACCTCCCGG...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCGAGACGAGGCTGCTTaGACGGCAAACTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFRDEAA*TANSGS
Trigger: GGATCCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGCTGGTCTCGAACTCCTaGCTTCAAGTAATCCGCCAG +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGLVSNS*LQVIRQ
Trigger: CTGGCGGATTACTTGAAGCCAGGAGTTCGAGACCAG...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTTTCTGTCACCACCAATaGGATGCCACATGCGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFFCHHQ*DATCAD
Trigger: GTCAGCGCATGTGGCATCTCATTGGTGGTGACAGAA...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATACTCCAGGTGCCTTTTTaGGATAAGTGTGAATCCACA +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKILQVPF*DKCEST
Trigger: TGTGGATTCACACTTATCTCAAAAAGGCACCTGGAG...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGCACCCAGGCTGGGGGTaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQHPGWG*SGMILA
Trigger: AGCCAAGATCATGCCACTGCACCCCCAGCCTGGGTG...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCTTGGACGGCAAACTCTaGATCCAGTGGGAGCCTTCG +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFLDGKL*IQWEPS
Trigger: CGAAGGCTCCCACTGGATCCAGAGTTTGCCGTCCAA...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTTTGGAATGACAGCTTaGCTATTCTACTTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSFGMTA*LFYFVV
Trigger: GACTACAAAGTAGAATAGTCAAGCTGTCATTCCAAA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAAGAGCAGAGGCACATaGCCCAACTTCCCCATCTTA +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFKSRGT*PNFPIL
Trigger: TAAGATGGGGAAGTTGGGGCATGTGCCTCTGCTCTT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGTTTTATGCGCTCCGTaGATGCTGATGGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFVLCAP*MLMVQG
Trigger: TCCCTGCACCATCAGCATGCACGGAGCGCATAAAAC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCGGACAGTTCTGGTCATaGATCTCTTTATCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSGQFWS*ISLSSN
Trigger: ATTTGAAGATAAAGAGATCCATGACCAGAACTGTCC...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCTCCATCATGTCAATCTaGGAGTTTAGAAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSSIMSI*EFRKST
Trigger: TGTGCTTTTTCTAAACTCCCAGATTGACATGATGGA...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAGGTTGGAACTTAATTTaGGACAGAATGTTATGGCTG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIGWNLI*DRMLWL
Trigger: CAGCCATAACATTCTGTCTCAAATTAAGTTCCAACC...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAAAAATTAGCTTAACGTaGGGGCTGCAATTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIKISLT*GLQFQL
Trigger: TAACTGGAATTGCAGCCCTCACGTTAAGCTAATTTT...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCTCAGTTGTATTGACCTaGTGGAGGCCATCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFSVVLT*WRPSEV
Trigger: AACCTCGGATGGCCTCCATCAGGTCAATACAACTGA...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCAACACGAGAATATTCTaGACAATTTATCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSNTRIF*TIYQGP
Trigger: AGGTCCTTGATAAATTGTGCAGAATATTCTCGTGTT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAGTTTCATCCAACAGTaGGTTGGACGCTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQSFIQQ*VGRWAW
Trigger: CCACGCCCAGCGTCCAACCCACTGTTGGATGAAACT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
3UTR CAA 72 bp TCCAGGATTCTACAGGATCCTTCTCAGAACCTGCAGTaGTTAGGCTACAGCAACATACTCAAGCTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRILQDPSQNLQ*LGYSNILKLSC
Trigger: ACAACTTAGCTTGAGTATGTTGCTGTAGCCTAACAACTGCAGGTTCTGAGAAGGATCCTGTAGAATCCTGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAAGCAATGTCCCAGAATaGTGCCAAAAGATAAATATG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKISNVPE*CQKINM
Trigger: CATATTTATCTTTTGGCATCATTCTGGGACATTGCT...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTATTCACAACCTGGGTTaGGAAAGGTCACACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFIHNLG*ERSHFS
Trigger: AGAGAAGTGTGACCTTTCTCAACCCAGGTTGTGAAT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTCTTCTCCTGGGGACTTaGATAGAAGAGAACTATGGT +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFLLLGT*IEENYG
Trigger: ACCATAGTTCTCTTCTATGCAAGTCCCCAGGAGAAG...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCACTTTCAGACTGGCTaGATCCACAGCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFHFQTG*IHSCFH
Trigger: GTGAAAACAGCTGTGGATCCAGCCAGTCTGAAAGTG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGGTTTTCCAAGGATTATaGTTCAAATCCTCTGAAATC +
Preference number: 4 (lower is better)
Translates to: VTSHELVVLMVARETRSLVFQGL*FKSSEI
Trigger: GATTTCAGAGGATTTGAACCATAATCCTTGGAAAAC...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGATAACAATGAGCAGTTaGTATCCACGTGGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGITMSS*YPRGSQ
Trigger: CTGAGAACCACGTGGATACCAACTGCTCATTGTTAT...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCTGATTTGGCCTCTCTaGGGGATACAATGTCATCTC +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFLIWPL*GIQCHL
Trigger: GAGATGACATTGTATCCCCCAGAGAGGCCAAATCAG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTACATATGCAGAGCTGTaGAATTCACTCTGCACTGAA +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFTYAEL*NSLCTE
Trigger: TTCAGTGCAGAGTGAATTTCACAGCTCTGCATATGT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTACTCAAGCTAAGTTGTaGTACAACCACTGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFTQAKL*YNHCDF
Trigger: GAAGTCACAGTGGTTGTATCACAACTTAGCTTGAGT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTCAACAGCAAAATGTATaGCGTGCAGCAAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFQQQNV*RAASFI
Trigger: GATGAAACTTGCTGCACGTCATACATTTTGCTGTTG...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCCAAGTGTCCGTTTTTaGCTGAAAGTGAAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFPSVRF*LKVKAV
Trigger: TACAGCCTTCACTTTCAGTCAAAAACGGACACTTGG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAAACTCTGGGGAAGATaGTACTTCGTAACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFKLWGR*YFVTSR
Trigger: CCTTGAGGTTACGAAGTAGCATCTTCCCCAGAGTTT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATAGTATTGTCATTGTTCTaGTGGTTGGAACTTAATTTG +
Preference number: 4 (lower is better)
Translates to: GVPDETGQYGETRSLLKIVLSLF*WLELNL
Trigger: CAAATTAAGTTCCAACCAGCAGAACAATGACAATAC...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAACCAGGCACCTCCTTaGCAAGTGTCCGTTTTTGAC +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQNQAPP*QVSVFD
Trigger: GTCAAAAACGGACACTTGGCAAGGAGGTGCCTGGTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAACTATGGTCACTGCTaGTTGGGCGATTGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQNYGHC*LGDCPS
Trigger: ACTCGGACAATCGCCCAAGCAGCAGTGACCATAGTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTCCCTCTCATAAAGGATaGATTTTCAGAGTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFPSHKG*IFRVQM
Trigger: CATCTGGACTCTGAAAATGCATCCTTTATGAGAGGG...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTCCCTACCTAGAGGGTaGTATGCAGTGATTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQSLPRG*YAVILR
Trigger: CCTGAGAATCACTGCATACCACCCTCTAGGTAGGGA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTGCTTGTATACCCAACTaGGTGAAACTAGCATGTTTA +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFACIPN*VKLACL
Trigger: TAAACATGCTAGTTTCACTCAGTTGGGTATACAAGC...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAGTGAAGGCTGTAATTaGGTGTCACAGTCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQSEGCN*VSQSAK
Trigger: CTTGGCAGACTGTGACACTCAATTACAGCCTTCACT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCGCAATAGTTAAGTTCTaGGGAAAAGCAGGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFAIVKF*GKAGFV
Trigger: CACAAAGCCTGCTTTTCCTCAGAACTTAACTATTGC...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCAGAAACCTGTCTCCTTaGACAATCCTTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFRNLSP*TILQNV
Trigger: CACATTCTGAAGGATTGTCCAAGGAGACAGGTTTCT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCTCCTTAGTAACAACCTaGAGGAAAAACTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFSLVTT*RKNWGE
Trigger: TTCACCCCAGTTTTTCCTCCAGGTTGTTACTAAGGA...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTCATCTTTCTGGATACTaGGAATTTGTAAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFHLSGY*EFVSAK
Trigger: CTTGGCACTTACAAATTCCCAGTATCCAGAAAGATG...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGCATAGAAGAGAACTATaGTCACTGCTGCTTGGGCGA +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQHRREL*SLLLGR
Trigger: TCGCCCAAGCAGCAGTGACCATAGTTCTCTTCTATG...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTTTCAAGGAACACTTTTaGTCATACCTTGCAACCAGT +
Preference number: 4 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFFKEHF*SYLATS
Trigger: ACTGGTTGCAAGGTATGACCAAAAGTGTTCCTTGAA...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGTTGTCATTGTTCTGCTaGTTGGAACTTAATTTGAGA +
Preference number: 4 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGLSLFC*LELNLR
Trigger: TCTCAAATTAAGTTCCAACCAGCAGAACAATGACAA...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCAACAAGGTCTCTGCTTaGCTTTTATTTTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFNKVSA*LLFSLH
Trigger: ATGGAGTGAAAATAAAAGTCAAGCAGAGACCTTGTT...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCACCAGTACTGAGACATaGCATAAAGTTAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFTSTET*HKVKTP
Trigger: TGGAGTTTTAACTTTATGTCATGTCTCAGTACTGGT...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTTGAGTGTCACAGTCTaGCAAGATCCATCCAATTTG +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQLSVTV*QDPSNL
Trigger: CAAATTGGATGGATCTTGGCAGACTGTGACACTCAA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCCTATTAGGAAAATCTaGTTACTTCCAGGATTCTAC +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFPIRKI*LLPGFY
Trigger: GTAGAATCCTGGAAGTAACCAGATTTTCCTAATAGG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCTTTTCAGAGTCCAGATaGATTAGGATAACTGCTTAC +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFFSESR*IRITAY
Trigger: GTAAGCAGTTATCCTAATCCATCTGGACTCTGAAAA...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR GCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCTGGTTTATGACAAAATaGCAAATGTTGGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFWFMTK*QMLGVK
Trigger: TTTAACCCCCAACATTTGGCATTTTGTCATAAACCA...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCATCAGATCATCTTTCTaGATACTGGGAATTTGTAAG +
Preference number: 4 (lower is better)
Translates to: HSTACHTVYRIMRILPGFIRSSF*ILGICK
Trigger: CTTACAAATTCCCAGTATCCAGAAAGATGATCTGAT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCACATTTCTGCATGTTTaGGAAATTTCATCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFTFLHV*EISSSA
Trigger: AGCACTTGATGAAATTTCCCAAACATGCAGAAATGT...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAAACTGATTGACCCATaGTCAGTCAGGAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQKLIDP*SVRRKC
Trigger: ACATTTTCTCCTGACTGACCATGGGTCAATCAGTTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTATGAGAATCCTCCCTaGATTCACAGTGTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQYENPP*IHSVFL
Trigger: AAGAAAGACACTGTGAATCCAGGGAGGATTCTCATA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR TCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGAAATTCACTCTGCACTaGATAGACAAAAAGGGTTAC +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQKFTLH*IDKKGY
Trigger: GTAACCCTTTTTGTCTATTCAGTGCAGAGTGAATTT...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CCA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGGACCCGAATTTCCTGTaGGGAAAAAGCTTTAAAATA +
Preference number: 4 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQDPNFL*GKSFKI
Trigger: TATTTTAAAGCTTTTTCCCCACAGGAAATTCGGGTC...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATACCGAGACGAGGCTGCTaGGACGGCAAACTCTGGATC +
Preference number: 5 (lower is better)
Translates to: GVPDETGQYGETRSLLKIPRRGC*DGKLWI
Trigger: GATCCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCGG...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAGGCAGGAGAATGGCTaGAGCCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFRQENG*SPGGGG
Trigger: ACCTCCACCTCCCGGGCTCAAGCCATTCTCCTGCCT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCCTGCTGCTTGGGCGATaGTCCGAGTGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: HSTACHTVYRIMRILPGFLLLGR*SEWDST
Trigger: GGTGCTGTCCCACTCGGACAATCGCCCAAGCAGCAG...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGTATGGTCACTGCTGCTaGGGCGATTGTCCGAGTGGG +
Preference number: 5 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGYGHCC*GDCPSG
Trigger: CCCACTCGGACAATCGCCCAAGCAGCAGTGACCATA...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGCCTTCTCCTGGGGACTaGCATAGAAGAGAACTATGG +
Preference number: 5 (lower is better)
Translates to: VTSHELVVLMVARETRSLPSPGD*HRRELW
Trigger: CCATAGTTCTCTTCTATGCAAGTCCCCAGGAGAAGG...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCCATAACAATGAGCAGTaGGTATCCACGTGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSHNNEQ*VSTWFS
Trigger: TGAGAACCACGTGGATACCAACTGCTCATTGTTATG...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCATAAAGCCCAAAGGCTaGTATACCCAACTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSIKPKG*YTQLSE
Trigger: TTCACTCAGTTGGGTATACAAGCCTTTGGGCTTTAT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GGAGTTCCAGACGAGACTGGCCAATATGGTGAAACCCGGTCTCTACTCAAAATATCTCAGAACCTGCAGTaGTTAGGCTACAGCAACATA +
Preference number: 5 (lower is better)
Translates to: GVPDETGQYGETRSLLKISQNLQ*LGYSNI
Trigger: TATGTTGCTGTAGCCTAACAACTGCAGGTTCTGAGA...TATTTTGAGTAGAGACCGGGTTTCACCATATTGGCCAGTCTCGTCTGGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGACTTTTGGTCATACCTaGCAACCAGTACTGAGACAT +
Preference number: 5 (lower is better)
Translates to: VTSHELVVLMVARETRSLTFGHT*QPVLRH
Trigger: ATGTCTCAGTACTGGTTGCAAGGTATGACCAAAAGT...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGGCTGGCGACTCTGATTaGGCCTCTCTGGGGGATACA +
Preference number: 5 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQAGDSD*ASLGDT
Trigger: TGTATCCCCCAGAGAGGCCAAATCAGAGTCGCCAGC...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GTAACTAGCCATGAGCTTGTGGTACTAATGGTGGCACGGGAAACAAGGTCTCTGTCATTGTTCTGCTGGTaGGAACTTAATTTGAGACAG +
Preference number: 5 (lower is better)
Translates to: VTSHELVVLMVARETRSLSLFCW*ELNLRQ
Trigger: CTGTCTCAAATTAAGTTCCAACCAGCAGAACAATGA...CAGAGACCTTGTTTCCCGTGCCACCATTAGTACCACAAGCTCATGGCTAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GGGGATTCAGCAGCAACCAGAACACATCCCCATTCCACACAGTTTACCTTCTCCAACATTCAGACTTGTTaGCCAACAGCAAAATGTATG +
Preference number: 5 (lower is better)
Translates to: GDSAATRTHPHSTQFTFSNIQTC*PTAKCM
Trigger: CATACATTTTGCTGTTGGCAAACAAGTCTGAATGTT...GGAGAAGGTAAACTGTGTGGAATGGGGATGTGTTCTGGTTGCTGCTGAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGGCCAAGTGTCCGTTTTaGACTGAAAGTGAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGAKCPF*TESEGC
Trigger: ACAGCCTTCACTTTCAGTCAAAAACGGACACTTGGC...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS CCA 90 bp ATATATTATTATTTGTGCAAATCACTTGGAGCACACAAAGAAAGCTaGGTCCCTTCAGAAGTTCATGATCGTTCTAGTGCGCGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: IYYYLCKSLGAHKES*VPSEVHDRSSARGG
Trigger: GCCTCCCCGCGCACTAGAACGATCATGAACTTCTGAAGGGACCCAGCTTTCTTTGTGTGCTCCAAGTGATTTGCACAAATAATAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348124.5
CDS-3UTR CAA 90 bp TGCGCCTTACCATCTAAAATTTACATGACAAGGTACCAGAAATTGGTCAGCTTCTCCCCACCCTTATCTTaGCATTCACTCCCTCTCATA +
Preference number: 5 (lower is better)
Translates to: CALPSKIYMTRYQKLVSFSPPLS*HSLPLI
Trigger: TATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGA...GAAGCTGACCAATTTCTGGTACCTTGTCATGTAAATTTTAGATGGTAAGGCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCGGAAATGACTCCTCTTaGTATCTAATGCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: HSTACHTVYRIMRILPGFGNDSS*YLMHSQ
Trigger: CTGGCTGTGCATTAGATACAAAGAGGAGTCATTTCC...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp GACTTTTATTTTCACTCCATAACAAACTCACCAGATCAGGAGCCTAAGGGTGGGTTACAGATGGGAAGCTaGCTAAAAGCTGAAATTAGG +
Preference number: 5 (lower is better)
Translates to: DFYFHSITNSPDQEPKGGLQMGS*LKAEIR
Trigger: CCTAATTTCAGCTTTTAGCAAGCTTCCCATCTGTAA...CCCACCCTTAGGCTCCTGATCTGGTGAGTTTGTTATGGAGTGAAAATAAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp CATTCCACAGCTTGTCATACAGTTTACAGAATTATGAGAATCCTCCCTGGATTCATTCAAGGAACACTTTaGGTCATACCTTGCAACCAG +
Preference number: 5 (lower is better)
Translates to: HSTACHTVYRIMRILPGFIQGTL*VIPCNQ
Trigger: CTGGTTGCAAGGTATGACCAAAAGTGTTCCTTGAAT...GAATCCAGGGAGGATTCTCATAATTCTGTAAACTGTATGACAAGCTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAAACAAGGTCTCTGCTaGACTTTTATTTTCACTCCA +
Preference number: 5 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFKQGLC*TFIFTP
Trigger: TGGAGTGAAAATAAAAGTCAAGCAGAGACCTTGTTT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AGTGTTTCCCCACCCTTATCTTTGCATTCACTCCCTCTCATAAAGGATGCATTTAACATTTCTGCATGTTaGGGAAATTTCATCAAGTGC +
Preference number: 5 (lower is better)
Translates to: SVSPPLSLHSLPLIKDAFNISAC*GNFIKC
Trigger: GCACTTGATGAAATTTCCCAAACATGCAGAAATGTT...AAATGCATCCTTTATGAGAGGGAGTGAATGCAAAGATAAGGGTGGGGAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGCATTTCCTTAAGGCATaGCACTGTTTAGGTTGTAAG +
Preference number: 5 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQHFLKA*HCLGCK
Trigger: CTTACAACCTAAACAGTGCAATGCCTTAAGGAAATG...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS-3UTR CAA 90 bp AATTCTGGAAGCTTGTATAAACAAAATAGGCCCCAAATTACATTCTCACCACAGTGGTTGGAACTTAATTaGAGACAGAATGTTATGGCT +
Preference number: 5 (lower is better)
Translates to: NSGSLYKQNRPQITFSPQWLELN*RQNVMA
Trigger: AGCCATAACATTCTGTCTCAAATTAAGTTCCAACCA...CTGTGGTGAGAATGTAATTTGGGGCCTATTTTGTTTATACAAGCTTCCAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526995.6
CDS GCA 72 bp GAGGACGGACACAGACACTGCGCGCCGAGACGAGGCTaGTTGGACGGCAAACTCTGGATCCAGTGGGAGCCT +
Preference number: 6 (lower is better)
Translates to: EDGHRHCAPRRG*LDGKLWIQWEP
Trigger: AGGCTCCCACTGGATCCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348124.5
ENST00000526995.6
CDS CCA 72 bp ACGGACACAGACACTGCGCGCCGAGACGAGGCTGCTTaGACGGCAAACTCTGGATCCAGTGGGAGCCTTCGC +
Preference number: 6 (lower is better)
Translates to: TDTDTARRDEAA*TANSGSSGSLR
Trigger: GCGAAGGCTCCCACTGGATCCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348124.5
ENST00000526995.6
CDS CAA 72 bp GACGGACACAGACACTGCGCGCCGAGACGAGGCTGCTaGGACGGCAAACTCTGGATCCAGTGGGAGCCTTCG +
Preference number: 6 (lower is better)
Translates to: DGHRHCAPRRGC*DGKLWIQWEPS
Trigger: CGAAGGCTCCCACTGGATCCAGAGTTTGCCGTCCAAGCAGCCTCGTCTCGGCGCGCAGTGTCTGTGTCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348124.5
ENST00000526995.6
CDS CCA 72 bp TATTTGTGCAAATCACTTGGAGCACACAAAGAAAGCTaGGTCCCTTCAGAAGTTCATGATCGTTCTAGTGCG +
Preference number: 6 (lower is better)
Translates to: YLCKSLGAHKES*VPSEVHDRSSA
Trigger: CGCACTAGAACGATCATGAACTTCTGAAGGGACCCAGCTTTCTTTGTGTGCTCCAAGTGATTTGCACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348124.5