RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000131323

Ensembl transcript IDs: ENST00000347662.8, ENST00000351691.9, ENST00000392745.8, ENST00000539721.5, ENST00000558700.5, ENST00000558880.1, ENST00000559734.1, ENST00000560371.5, ENST00000560463.5

Found 1313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGAGAGACCATGGCCCCAGGCTGGCCCAGGTGGCCAGCGCCAAGTaGGGGTGCCCAGGCCGAGGGTGGAGCAGCGCAAGGCTTGCCCGC +
Preference number: 1 (lower is better)
Translates to: QRDHGPRLAQVASAK*GCPGRGWSSARLAR
Trigger: GCGGGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGTCTCTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CCCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCCCGAGCAGCGGTCTCTGGAATGCTC +
Preference number: 1 (lower is better)
Translates to: PVATLPARVVVRSAR*SAWAGPRAAVSGML
Trigger: GAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp TGGGGCGAAGGCACACCCAGGACAGATGGCAGCACCAGAGACAGGTaGGCCACCGGGCACCCACCAAGCTGTCCCCGCGCGGCCACGGGG +
Preference number: 1 (lower is better)
Translates to: WGEGTPRTDGSTRDR*ATGHPPSCPRAATG
Trigger: CCCCGTGGCCGCGCGGGGACAGCTTGGTGGGTGCCCGGTGGCCCACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTGCCTTCGCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CTGGGCCTCAGCTGCAGAGAGACCATGGCCCCAGGCTGGCCCAGGTaGCCAGCGCCAAGTGAGGGTGCCCAGGCCGAGGGTGGAGCAGCG +
Preference number: 1 (lower is better)
Translates to: LGLSCRETMAPGWPR*PAPSEGAQAEGGAA
Trigger: CGCTGCTCCACCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGTCTCTCTGCAGCTGAGGCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CCCGTTGGTCAGCCTGGGCAGGCCCCCGAGCAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCGGGCTGTGGGGGTGCCCACGGCCCC +
Preference number: 1 (lower is better)
Translates to: PVGQPGQAPEQRSLE*SEGSASGCGGAHGP
Trigger: GGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp AACGCAGGCTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTaGCAGCCCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCAC +
Preference number: 1 (lower is better)
Translates to: NAGSAWPPGPPHPHT*QPRDGRGFTRLPCH
Trigger: GTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CGGCCCCGGTGGGGACACGGAGAGGCTCGGCTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACCAGGCCGTACTTGGACCAGGCGGCT +
Preference number: 1 (lower is better)
Translates to: RPRWGHGEARLLFHT*LPQGGTRPYLDQAA
Trigger: AGCCGCCTGGTCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAGCCGAGCCTCTCCGTGTCCCCACCGGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp TCCCGCTTGCTGCCAGGGCCCTGTGATGCGGGGAGGGCCGATCACTaGCCAAGGGGCCACTGGGCCTCAGCTGCAGAGAGACCATGGCCC +
Preference number: 1 (lower is better)
Translates to: SRLLPGPCDAGRADH*PRGHWASAAERPWP
Trigger: GGGCCATGGTCTCTCTGCAGCTGAGGCCCAGTGGCCCCTTGGGCAGTGATCGGCCCTCCCCGCATCACAGGGCCCTGGCAGCAAGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GAGCGCCCGTTGGTCAGCCTGGGCAGGCCCCCGAGCAGCGGTCTCTaGAATGCTCAGAGGGTTCTGCTTCGGGCTGTGGGGGTGCCCACG +
Preference number: 1 (lower is better)
Translates to: ERPLVSLGRPPSSGL*NAQRVLLRAVGVPT
Trigger: CGTGGGCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CTCAGAGGGTTCTGCTTCGGGCTGTGGGGGTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGGCTTCTGTTCCACACCTGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: LRGFCFGLWGCPRPR*GHGEARLLFHTCLP
Trigger: AGGGAGGCAGGTGTGGAACAGAAGCCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAACCCTCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp ACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTaGGCAGGCCCCCGAGCAGCGGTCTCTGGAATGCTCAGAGGGTTC +
Preference number: 1 (lower is better)
Translates to: TLPARVVVRSARWSA*AGPRAAVSGMLRGF
Trigger: GAACCCTCTGAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACGCACTGCTGCTTCTGGGGGCCACAC +
Preference number: 1 (lower is better)
Translates to: GPMASRQERLPGKGY*RRPSDTHCCFWGPH
Trigger: GTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp GGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGAC +
Preference number: 1 (lower is better)
Translates to: GVLTRGSSRRHASAF*RFLRLTRSFSERED
Trigger: GTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR GCA 90 bp TGTGGGACCCTCAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCT +
Preference number: 1 (lower is better)
Translates to: CGTLRWAPWRPARSV*LGRATGDVPVTRTA
Trigger: AGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp CTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTaGGCCGGGCCCAGGCCAGCCAACCAGCGTGCCTGGCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: LARGSVWSQEPVPFT*AGPRPANQRAWQQG
Trigger: TCCCTGCTGCCAGGCACGCTGGTTGGCTGGCCTGGGCCCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp GGTCATAAGGGCCCCCTCTGTCCACCCGCACAGGGAACACACATCTaGAAGTCCAGGCCTTCGCCCAGGGGTCCGGCGAGGCTTGCGCTC +
Preference number: 1 (lower is better)
Translates to: GHKGPLCPPAQGTHI*KSRPSPRGPARLAL
Trigger: GAGCGCAAGCCTCGCCGGACCCCTGGGCGAAGGCCTGGACTTGCAGATGTGTGTTCCCTGTGCGGGTGGACAGAGGGGGCCCTTATGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACCCCTGACATaGAGACCGAAGGCCGGTGCTGTCAGCAACAGAGAGCTCGTCCGA +
Preference number: 1 (lower is better)
Translates to: HTCGPPSAVTRPPLT*RPKAGAVSNRELVR
Trigger: TCGGACGAGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp ACACGGAGAGGCTCGGCTTCTGTTCCACACCTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGACCAGGCGGCTCACTCGTGGGGCCT +
Preference number: 1 (lower is better)
Translates to: TRRGSASVPHLPPSG*DQAVLGPGGSLVGP
Trigger: AGGCCCCACGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAGCCGAGCCTCTCCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp AGCCGAGGCAGGCAGTCTGACGTGCACGGCCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAGTGGCACAGGTGTGACAGTTCGCAC +
Preference number: 1 (lower is better)
Translates to: SRGRQSDVHGPAGQL*ARLVGEWHRCDSSH
Trigger: GTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GGGGAGTCTGCACCCGCCCAATCCTGCAACGGCCCAAGGAGACAGTaGCACTGCCACCCTACTGGGGCTGTGCACAGGGTGACGGTCCTC +
Preference number: 1 (lower is better)
Translates to: GESAPAQSCNGPRRQ*HCHPTGAVHRVTVL
Trigger: GAGGACCGTCACCCTGTGCACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGCAGACTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp CCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTGGGGGCCACACCAGGACTTCAACCC +
Preference number: 1 (lower is better)
Translates to: PPGASAWEGLLETSQ*HALLLLGATPGLQP
Trigger: GGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp TCTGCACCCGCCCAATCCTGCAACGGCCCAAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTGCACAGGGTGACGGTCCTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: SAPAQSCNGPRRQWH*HPTGAVHRVTVLRP
Trigger: TGGCCTGAGGACCGTCACCCTGTGCACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp TCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGAGAC +
Preference number: 1 (lower is better)
Translates to: SCHSGYVCGTLRWAP*RPARSVCLGRATGD
Trigger: GTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTaGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCT +
Preference number: 1 (lower is better)
Translates to: LKDSCHSGYVCGTLR*APWRPARSVCLGRA
Trigger: AGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp AGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACCCCTaGCATGGAGACCGAAGGCCGGTGCTGTCAGCAACAGAGAGCTCG +
Preference number: 1 (lower is better)
Translates to: RNTPAGLPQQSPAHP*HGDRRPVLSATESS
Trigger: CGAGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp CAAATCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCGGGGCTCACTCAGGCTCCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: QIPTWPPVCHQSTAS*KAQRMSGLTQAPSS
Trigger: GCTGGAGGGAGCCTGAGTGAGCCCCGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACACCAGGACTTCAACCCAGAGGGGAGG +
Preference number: 1 (lower is better)
Translates to: RLPGKGYWRRPSDTH*CFWGPHQDFNPEGR
Trigger: CCTCCCCTCTGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CCCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGTGGAAAATGCCCTTGCAGTGAGCTG +
Preference number: 1 (lower is better)
Translates to: PRDGRGFTRLPCHRM*GTPGSGGKCPCSEL
Trigger: CAGCTCACTGCAAGGGCATTTTCCACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp GCCGCCGGGAGAGGGGACGCCGTCCCAGGCTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACACACTCAGAACAGAGACCCCGATAC +
Preference number: 1 (lower is better)
Translates to: AAGRGDAVPGCCPLC*VHERKTHSEQRPRY
Trigger: GTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCAGCCTGGGACGGCGTCCCCTCTCCCGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CTCAGCAGTCACCCGCCCACCCCTGACATGGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCTCGTCCGAACACATGGGGCAGAATC +
Preference number: 1 (lower is better)
Translates to: LSSHPPTPDMETEGR*CQQQRARPNTWGRI
Trigger: GATTCTGCCCCATGTGTTCGGACGAGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGACTGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp ACCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTCACCCGCCCACCCCTGACATGGAGA +
Preference number: 1 (lower is better)
Translates to: TVDGMQQDDGMEKHT*GPPSAVTRPPLTWR
Trigger: TCTCCATGTCAGGGGTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAGGACTTCAACCCAGAGGGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: LPGKGYWRRPSDTHC*FWGPHQDFNPEGRK
Trigger: TTTCCTCCCCTCTGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CGTTGCTTTCGGAGACCGTTGACGGCATGCAGCAAGATGACGGGATaGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCAC +
Preference number: 1 (lower is better)
Translates to: RCFRRPLTACSKMTG*RNTPAGLPQQSPAH
Trigger: GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTTCTaGGGGCCACACCAGGACTTCAACCCAGAGGGGAGGAAACGGTTC +
Preference number: 1 (lower is better)
Translates to: GKGYWRRPSDTHCCF*GPHQDFNPEGRKRF
Trigger: GAACCGTTTCCTCCCCTCTGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp AGTCTGACGTGCACGGCCCAGCTGGCCAATTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTGACAGTTCGCACACATTGGTTTTGC +
Preference number: 1 (lower is better)
Translates to: SLTCTAQLANCGRGL*ASGTGVTVRTHWFC
Trigger: GCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GAGAGGCAGGAGAAGCTGCCTGAGCAAAGGGCTCCCCTGTTCAACTaGCTGTTGTGGCATCGAAGGGACACAGGTGCTGTCCCTCGGCAG +
Preference number: 1 (lower is better)
Translates to: ERQEKLPEQRAPLFN*LLWHRRDTGAVPRQ
Trigger: CTGCCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGGCAGCTTCTCCTGCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp AGCCCAGCTGTTGGGATCAGTGTACTCCCCGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTGCGGACAGAATGGTCGTTTAAGGAC +
Preference number: 1 (lower is better)
Translates to: SPAVGISVLPGPPLG*QGMTPLRTEWSFKD
Trigger: GTCCTTAAACGACCATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCCGGGGAGTACACTGATCCCAACAGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp CAGCCTGGACGAGGCAGCAATAATGACCAGGTAGCCTGCCGACACTaGCCTCGCCTGGCTAGGACCCCGGTGCGCACATTCTACTTTGGA +
Preference number: 1 (lower is better)
Translates to: QPGRGSNNDQVACRH*PRLARTPVRTFYFG
Trigger: TCCAAAGTAGAATGTGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTCGGCAGGCTACCTGGTCATTATTGCTGCCTCGTCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GTGCACGGCCCAGCTGGCCAATTGTGGGCGCGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCGCACACATTGGTTTTGCCTAAGAAG +
Preference number: 1 (lower is better)
Translates to: VHGPAGQLWARLVGE*HRCDSSHTLVLPKK
Trigger: CTTCTTAGGCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GAGAAGCTGCCTGAGCAAAGGGCTCCCCTGTTCAACTGGCTGTTGTaGCATCGAAGGGACACAGGTGCTGTCCCTCGGCAGAGACTGCTC +
Preference number: 1 (lower is better)
Translates to: EKLPEQRAPLFNWLL*HRRDTGAVPRQRLL
Trigger: GAGCAGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGGCAGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp TTGGGATCAGTGTACTCCCCGGCCCTCCCTTGGGCTGACAAGGAATaGCCCCGCTGCGGACAGAATGGTCGTTTAAGGACCCATCCAGAC +
Preference number: 1 (lower is better)
Translates to: LGSVYSPALPWADKE*PRCGQNGRLRTHPD
Trigger: GTCTGGATGGGTCCTTAAACGACCATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCCGGGGAGTACACTGATCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp GGTGAGAGTTCACAAGACAGACTAGACACAGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGGCCACCGGGGCCTCCTCACCCGCAC +
Preference number: 1 (lower is better)
Translates to: GESSQDRLDTVQQEK*NAGSAWPPGPPHPH
Trigger: GTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCACTGTGTCTAGTCTGTCTTGTGAACTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CTTCAGAGTGAAGTGTGGCTAGTCTATTATAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: LQSEVWLVYYKTCQV*SRVAPPAGTRPPSA
Trigger: GGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGACTAGCCACACTTCACTCTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR GCA 90 bp CACCAGCTCTACGCACAACGTTGCTTTCGGAGACCGTTGACGGCATaGAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: HQLYAQRCFRRPLTA*SKMTGWRNTPAGLP
Trigger: AGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp AACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGATGCTGTaGAGCGTCGACACTGCCCTCCACACTTCACAGACCTTCTCCTAC +
Preference number: 1 (lower is better)
Translates to: NRGTGREEAANLQML*SVDTALHTSQTFSY
Trigger: GTAGGAGAAGGTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp AACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGATaGTGTGCAGCGTCGACACTGCCCTCCACACTTCACAGACCTTCT +
Preference number: 1 (lower is better)
Translates to: NRTEAPAEKRLRICR*CAASTLPSTLHRPS
Trigger: AGAAGGTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp GAGAGGGGACGCCGTCCCAGGCTGCTGCCCACTGTGTTGAGTACATaGGAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAAC +
Preference number: 1 (lower is better)
Translates to: ERGRRPRLLPTVLST*EEDTLRTETPIQPN
Trigger: GTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCAGCCTGGGACGGCGTCCCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp GGTCCGGCGAGGCTTGCGCTCAGGAGACAGAACCACATTCATGCTTaGTGGCTCCTAGAATTGACACAAATCCCAACCTGGCCGCCTGTG +
Preference number: 1 (lower is better)
Translates to: GPARLALRRQNHIHA*WLLELTQIPTWPPV
Trigger: CACAGGCGGCCAGGTTGGGATTTGTGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp CAGGTGGGGGACACCTTCGAGGGAACAGTAGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTATGAGCAGGGACACACGACTCCCTCA +
Preference number: 1 (lower is better)
Translates to: QVGDTFEGTVVFRSF*RKSFLYEQGHTTPS
Trigger: TGAGGGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAACTACTGTTCCCTCGAAGGTGTCCCCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp CAGACTCCCCTTCCTTTGTCCAACATCACCTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTACCACCAGACGCCATCAAGCAAAAGG +
Preference number: 1 (lower is better)
Translates to: QTPLPLSNITSGCRM*VHHADYHQTPSSKR
Trigger: CCTTTTGCTTGATGGCGTCTGGTGGTAGTCAGCATGGTGGACCCACATCCTACAGCCAGAGGTGATGTTGGACAAAGGAAGGGGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 90 bp GGGAACAGTAGTTTTCCGCAGCTTCTGCAGGAAGTCCTTCCTTTATaGGCAGGGACACACGACTCCCTCACAGGGCAGAACCAAGGATAC +
Preference number: 1 (lower is better)
Translates to: GNSSFPQLLQEVLPL*AGTHDSLTGQNQGY
Trigger: GTATCCTTGGTTCTGCCCTGTGAGGGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAACTACTGTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTaGTCATGTGTGGTAAACAAGCAGCACCCCCAAGCACACAGTGTG +
Preference number: 1 (lower is better)
Translates to: VGFCKVLSSSVLLGV*SCVVNKQHPQAHSV
Trigger: CACACTGTGTGCTTGGGGGTGCTGCTTGTTTACCACACATGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 90 bp GTTAAACTAGCACTTTCTAGAATGATGCTCAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCATCTAAGGCACGTGGGCCGTATGCCA +
Preference number: 1 (lower is better)
Translates to: VKLALSRMMLNANPG*RSSMSHLRHVGRMP
Trigger: TGGCATACGGCCCACGTGCCTTAGATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATTGAGCATCATTCTAGAAAGTGCTAGTTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp TTGTTTTGTTACGAAGGTGACGGGGAAGCAGACCGGCTTAATTCATaGACAAACGACTCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: LFCYEGDGEADRLNS*TNDSVGFCKVLSSS
Trigger: AGAGCTGCTCAGTACTTTACAGAAACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTCTGCTTCCCCGTCACCTTCGTAACAAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 90 bp AGACCTTCTCCTACAGGCATTTCTTACAGAAATCACCGGACATCATaGCAGCTTGTGTGTTTTCCAATTAAGTCATTGAATTTGCTGTTG +
Preference number: 1 (lower is better)
Translates to: RPSPTGISYRNHRTS*QLVCFPIKSLNLLL
Trigger: CAACAGCAAATTCAATGACTTAATTGGAAAACACACAAGCTGGCATGATGTCCGGTGATTTCTGTAAGAAATGCCTGTAGGAGAAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GCGCCAAGTGAGGGTGCCCAGGCCGAGGGTGGAGCAGCGCAAGGCTaGCCCGCCGCCGGGAGAGGGGACGCCGTCCCAGGCTGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: APSEGAQAEGGAAQG*PAAGRGDAVPGCCP
Trigger: TGGGCAGCAGCCTGGGACGGCGTCCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCACCCTCACTTGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: QVGPMASRQERLPGKGYWCPRPR*GHGEAR
Trigger: CCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCA...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCCCTTCCCGCCAGGGTaGTGGTCAGGAGCGCCCGTT +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRPFPPG*WSGAPV
Trigger: AACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCGTGCACGGCCCAGCTaGCCAATTGTGGGCGCGGCT +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRRARPS*PIVGAA
Trigger: AGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACAGCCCTGGCAGGTGGTaGGCCTGTGGGGCCCGGGCT +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHSPGRW*ACGARA
Trigger: AGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCT...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGA +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRPARSV*LGRATG
Trigger: TCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGTTCCCGCCAGGGTGGTaGTCAGGAGCGCCCGTTGGT +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRFPPGW*SGAPVG
Trigger: ACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAA...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACCCTCACGCCGCCTGCTaGCCCGGCTCCCTGATGCCA +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHPHAAC*PGSLMP
Trigger: TGGCATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGG...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACAC +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRPSDTH*CFWGPH
Trigger: GTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCCATTTCCCGCTTGCTaGCAGGGCCCTGTGATGCGG +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRPFPAC*QGPVMR
Trigger: CCGCATCACAGGGCCCTGGCAGCAAGCGGGAAATGG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTG +
Preference number: 2 (lower is better)
Translates to: QVGPMASRQERLPGKGYWCGRGL*ASGTGV
Trigger: CACACCTGTGCCACTCGCCCACAAGCCGCGCCCACA...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: QVGPMASRQERLPGKGYWPAGQL*ARLVGE
Trigger: CTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRLETSQ*HALLLL
Trigger: CAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAG +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHPAGQL*ARLVGE
Trigger: CTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGTGGCCAGCGCCAAGTaGGGGTGCCCAGGCCGAGGG +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRVASAK*GCPGRG
Trigger: CCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCAC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGGCACGTGGGCCGTATaGCACCAGCTCTACGCACAA +
Preference number: 2 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPGTWAV*HQLYAQ
Trigger: TTGTGCGTAGAGCTGGTGGCATACGGCCCACGTGCC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGTCACAAGAGCCAGTaGCCTTCACGTGAGCCGGGC +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHGHKSQ*PSREPG
Trigger: GCCCGGCTCACGTGAAGGGCACTGGCTCTTGTGACC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGGTCCGGCGAGGCTTaGGCTCAGGAGACAGAACCA +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHGSGEA*AQETEP
Trigger: TGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGTCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRSKGHR*CPSAET
Trigger: AGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGA...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGACCAGGCCGTACTTaGACCAGGCGGCTCACTCGT +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHGPGRT*TRRLTR
Trigger: ACGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAGCCCTGGCAGGTGGTaGGCCTGTGGGGCCCGGGCT +
Preference number: 2 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVSPGRW*ACGARA
Trigger: AGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GAGAGCCGAGGCAGGCAGTCTGACGTGCACGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGCGAGTGGCACAGGTGTGACAGTTCG +
Preference number: 2 (lower is better)
Translates to: ESRGRQSDVHGPAGQ*WARLVGEWHRCDSS
Trigger: CGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGGCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR TCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCCGAGGCAGGCAGTCTaGCGTGCACGGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAPRQAV*RARPSW
Trigger: CCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPMEKHT*GPPSAV
Trigger: GACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCAT...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAG +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHSDTHC*FWGPHQ
Trigger: CTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACT...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 2 (lower is better)
Translates to: SVCLGRATGDVPVTRTAARCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGTTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTG +
Preference number: 2 (lower is better)
Translates to: SQPGRLCVTRARRAERPSCGRGL*ASGTGV
Trigger: CACACCTGTGCCACTCGCCCACAAGCCGCGCCCACA...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAACCATGGCCCCAGGCTaGCCCAGGTGGCCAGCGCCA +
Preference number: 2 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPTMAPG*PRWPAP
Trigger: TGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGCTCGTCCGAACACATaGGGCAGAATCCAAACACCT +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRARPNT*GRIQTP
Trigger: AGGTGTTTGGATTCTGCCCCATGTGTTCGGACGAGC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCTCCAGAAGCCGACGGTaGAGCCTGGCTTCCCCTCAG +
Preference number: 2 (lower is better)
Translates to: SQPGRLCVTRARRAERPSSRSRR*SLASPQ
Trigger: CTGAGGGGAAGCCAGGCTCCACCGTCGGCTTCTGGA...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCACTTCCAGCAGGCACTaGGGCGAAGGCACACCCAGG +
Preference number: 2 (lower is better)
Translates to: SQPGRLCVTRARRAERPSTSSRH*GEGTPR
Trigger: CCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGCCAGGCTGGCCCAGGTaGCCAGCGCCAAGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRPGWPR*PAPSEG
Trigger: ACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGG...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR GCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGGGAGGGCCGATCACTaGCCAAGGGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTGRADH*PRGHWA
Trigger: GGCCCAGTGGCCCCTTGGGCAGTGATCGGCCCTCCC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCGCCCACCCCTGACATaGAGACCGAAGGCCGGTGCT +
Preference number: 2 (lower is better)
Translates to: SVCLGRATGDVPVTRTAARPPLT*RPKAGA
Trigger: AGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACCACCATGAAGCGTGGTaGATAGCAAAAGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PETAEASHVCPATACGAHHHEAW*IAKGVQ
Trigger: CTGCACCCCTTTTGCTATGCACCACGCTTCATGGTG...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGA +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPLPPSG*DQAVLG
Trigger: TCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTACTTCCAGCAGGCACTaGGGCGAAGGCACACCCAGG +
Preference number: 2 (lower is better)
Translates to: SVCLGRATGDVPVTRTAATSSRH*GEGTPR
Trigger: CCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGT...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGTGGAGCAGGCTGACGTaGTCTGGGAGGCAGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVWSRLT*SGRQLA
Trigger: AGCCAGCTGCCTCCCAGACCACGTCAGCCTGCTCCA...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GGCAGTCTGACGTGCACGGCCCAGCTGGCCAATTGTGGGCGCGGCTaGTGGGCGAGTGGCACAGGTGTGACAGTTCGCACACATTGGTTT +
Preference number: 2 (lower is better)
Translates to: GSLTCTAQLANCGRG*WASGTGVTVRTHWF
Trigger: AAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: RQIRTTERFDRERARRAPKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAATGCTCAGAGGGTTCTaGTTCGGGCTGTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPMLRGF*FGLWGC
Trigger: GCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCAT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAG +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPSDTHC*FWGPHQ
Trigger: CTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCATTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 2 (lower is better)
Translates to: LCLATGASSPAHLPAPRRTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPETEGR*CQQQRA
Trigger: AGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTAGCAAGATGACGGGATaGAGAAACACACCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: RQIRTTERFDRERARRAPSKMTG*RNTPAG
Trigger: GCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCT...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGCACACCCAGGACAGATaGCAGCACCAGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVHTQDR*QHQRQV
Trigger: CACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTG...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGA +
Preference number: 2 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEAAACT*LSVVTR
Trigger: TCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGC...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGA +
Preference number: 2 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVAAACT*LSVVTR
Trigger: TCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp CAGGAGAAGCTGCCTGAGCAAAGGGCTCCCCTGTTCAACTGGCTGTaGTGGCATCGAAGGGACACAGGTGCTGTCCCTCGGCAGAGACTG +
Preference number: 2 (lower is better)
Translates to: QEKLPEQRAPLFNWL*WHRRDTGAVPRQRL
Trigger: CAGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGGCAGCTTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTGATGCACAGCATCCATaGGCGAGGCTCCGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: SVCLGRATGDVPVTRTAADAQHP*ARLRSE
Trigger: TTCTGAACGGAGCCTCGCTCATGGATGCTGTGCATC...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAGGGGTGCTGGAATGTaGCGTTGGCATGGTCGACAT +
Preference number: 2 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVRGAGM*RWHGRH
Trigger: ATGTCGACCATGCCAACGTCACATTCCAGCACCCCT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: SQPGRLCVTRARRAERPSIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAAGCAAGATGACGGGATaGAGAAACACACCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPSKMTG*RNTPAG
Trigger: GCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp CAGGCCGTACTTGGACCAGGCGGCTCACTCGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAGCAGCGGAGGCTCCAGAAGCCGACG +
Preference number: 2 (lower is better)
Translates to: QAVLGPGGSLVGPRD*ESVVIKQRRLQKPT
Trigger: CGTCGGCTTCTGGAGCCTCCGCTGCTTAATTACCACAGATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTGGTCCAAGTACGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GCGCGGCTTGTGGGCGAGTGGCACAGGTGTGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGT +
Preference number: 2 (lower is better)
Translates to: ARLVGEWHRCDSSHT*VLPKKHPSRVAPIS
Trigger: ACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGAAGTCCTTCCTTTATaGGCAGGGACACACGACTCC +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSREVLPL*AGTHDS
Trigger: GGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGCTGCCAGGGCCCTGTaGTGCGGGGAGGGCCGATCA +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDAARAL*CGEGRS
Trigger: TGATCGGCCCTCCCCGCATCACAGGGCCCTGGCAGC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: RQIRTTERFDRERARRAPIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCTCTACGCACAACGTTaGTTTCGGAGACCGTTGACG +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPLYAQR*FRRPLT
Trigger: CGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTTCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACT +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTSKGHR*CPSAET
Trigger: AGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGA...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAATGAAACGCAGGCTCTaGTTGGCCACCGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAMKRRL*LATGAS
Trigger: GGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCAT...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGA +
Preference number: 2 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMLPPSG*DQAVLG
Trigger: TCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTC +
Preference number: 2 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSLRWAP*RPARSV
Trigger: GACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GCCGTATGCCACCAGCTCTACGCACAACGTTGCTTTCGGAGACCGTaGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCG +
Preference number: 2 (lower is better)
Translates to: AVCHQLYAQRCFRRP*TACSKMTGWRNTPA
Trigger: CGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTGGCATACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp CATCTAAGGCACGTGGGCCGTATGCCACCAGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGACGGCATGCAGCAAGATGACGGGATG +
Preference number: 2 (lower is better)
Translates to: HLRHVGRMPPALRTT*LSETVDGMQQDDGM
Trigger: CATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTGGCATACGGCCCACGTGCCTTAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGATGCACAGCATCCATaGGCGAGGCTCCGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTDAQHP*ARLRSE
Trigger: TTCTGAACGGAGCCTCGCTCATGGATGCTGTGCATC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTCACCCGCCCACCCCTaGCATGGAGACCGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQSPAHP*HGDRRP
Trigger: CGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACA +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRCCPLC*VHERKT
Trigger: TGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCA...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCAT +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRNANPG*RSSMSH
Trigger: ATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGCCGACGGTGGAGCCTaGCTTCCCCTCAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDADGGA*LPLSRC
Trigger: GCACCTGCTGAGGGGAAGCCAGGCTCCACCGTCGGC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTAATGGGGCTGCAATGTaGGTCATAAGGGCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTNGAAM*VIRAPS
Trigger: AGAGGGGGCCCTTATGACCCACATTGCAGCCCCATT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp GGGTCCGGCGAGGCTTGCGCTCAGGAGACAGAACCACATTCATGCTaGATGGCTCCTAGAATTGACACAAATCCCAACCTGGCCGCCTGT +
Preference number: 2 (lower is better)
Translates to: GSGEACAQETEPHSC*MAPRIDTNPNLAAC
Trigger: ACAGGCGGCCAGGTTGGGATTTGTGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMETEGR*CQQQRA
Trigger: AGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 2 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVVRSAR*SAWAGP
Trigger: GGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGAC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCCACAGCCAGTGCAGTaGGAGCCCTGGCAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHPQPVQ*EPWQVV
Trigger: CACCACCTGCCAGGGCTCCCACTGCACTGGCTGTGG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACGGCCACACGGGGTCATaGGGAAGCCTCCTGCCACAG +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHGHTGS*GSLLPQ
Trigger: CTGTGGCAGGAGGCTTCCCCATGACCCCGTGTGGCC...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 90 bp CTTGTGGGCGAGTGGCACAGGTGTGACAGTTCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAG +
Preference number: 2 (lower is better)
Translates to: LVGEWHRCDSSHTLV*PKKHPSRVAPISGK
Trigger: CTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCTCCGTTCAGAATTGTaGAGTCGTGTCATTAACTAC +
Preference number: 2 (lower is better)
Translates to: RQIRTTERFDRERARRAPLRSEL*SRVINY
Trigger: GTAGTTAATGACACGACTTCACAATTCTGAACGGAG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAACTGTGTTGAGTACATaGGAGGAAGACACACTCAGA +
Preference number: 2 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPTVLST*EEDTLR
Trigger: TCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCG +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHQSTAS*KAQRMS
Trigger: CGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAVQQEK*NAGSAW
Trigger: CCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCAC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 2 (lower is better)
Translates to: AASSVSQGPFLSARTSVKIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACAC +
Preference number: 2 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQPSDTH*CFWGPH
Trigger: GTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGG...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGGACCGGCTTAATTCATaGACAAACGACTCAGTTGGT +
Preference number: 2 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEDRLNS*TNDSVG
Trigger: ACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTC...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGTGGTGGAATGGGGCTaGAATGTGGGTCATAAGGGC +
Preference number: 2 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAVVEWG*NVGHKG
Trigger: GCCCTTATGACCCACATTGCAGCCCCATTCCACCAC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTCCAGAAGCCGACGGTaGAGCCTGGCTTCCCCTCAG +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDSRSRR*SLASPQ
Trigger: CTGAGGGGAAGCCAGGCTCCACCGTCGGCTTCTGGA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCAGGCGGCTCACTCGTaGGGCCTAGAGATTTGGAAT +
Preference number: 2 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMQAAHS*GLEIWN
Trigger: ATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 2 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 2 (lower is better)
Translates to: ACTWLSVVTRASALHVSRTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACGGGACAGGCCTCAGGTaGGGGACACCTTCGAGGGAA +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHGTGLR*GTPSRE
Trigger: TTCCCTCGAAGGTGTCCCCCACCTGAGGCCTGTCCC...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVGPPLG*QGMTPL
Trigger: CAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGGGCTGTGCACAGGGTaGCGGTCCTCAGGCCAATCC +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVGLCTG*RSSGQS
Trigger: GGATTGGCCTGAGGACCGTCACCCTGTGCACAGCCC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACC +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHLLFHT*LPQGGT
Trigger: GGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACCGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCG +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDRLVGE*HRCDSS
Trigger: CGAACTGTCACACCTGTGCCACTCGCCCACAAGCCG...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACCCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACG +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDPGKGY*RRPSDT
Trigger: CGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGG...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCT +
Preference number: 2 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPRDSKQ*VEKMPS
Trigger: AGATGGCATTTTCTCAACTCACTGTTTACTGTCTCT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHETEGR*CQQQRA
Trigger: AGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTC...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCCCCCATTTCCCGCTTaGTGCCAGGGCCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVPPFPA*CQGPVM
Trigger: CATCACAGGGCCCTGGCAGCAAGCGGGAAATGGGGG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCTTCAGAGTGAAGTGTaGCTAGTCTATTATAAAACG +
Preference number: 2 (lower is better)
Translates to: RQIRTTERFDRERARRAPLQSEV*LVYYKT
Trigger: CGTTTTATAATAGACTAGCCACACTTCACTCTGAAG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGCCGACGGTGGAGCCTaGCTTCCCCTCAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTADGGA*LPLSRC
Trigger: GCACCTGCTGAGGGGAAGCCAGGCTCCACCGTCGGC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCAGTATGCCACACCATaGCTCCCCAGCGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVQYATP*LPSATG
Trigger: GCCTGTGGCGCTGGGGAGCCATGGTGTGGCATACTG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGT +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVPCHRM*GTPGSG
Trigger: ACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGTTTTGTTACGAAGGTaGCGGGGAAGCAGACCGGCT +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDVLLRR*RGSRPA
Trigger: AGCCGGTCTGCTTCCCCGTCACCTTCGTAACAAAAC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTAACCACATTCATGCTTaGTGGCTCCTAGAATTGACA +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTNHIHA*WLLELT
Trigger: TGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGAGACCGTTGACGGCATaGAGCAAGATGACGGGATGG +
Preference number: 2 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQRPLTA*SKMTGW
Trigger: CCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCT...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAAGACCGTTGACGGCATaGAGCAAGATGACGGGATGG +
Preference number: 2 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSRPLTA*SKMTGW
Trigger: CCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGATGCTCAGAGGGTTCTaGTTCGGGCTGTGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKMLRGF*FGLWGC
Trigger: GCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCAT...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVRRQWH*HPTGAV
Trigger: CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGACACTGACCTCGCCTaGCTAGGACCCCGGTGCGCA +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTDTDLA*LGPRCA
Trigger: TGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCT +
Preference number: 2 (lower is better)
Translates to: EEAANLQMLCSVDTALHTRDSKQ*VEKMPS
Trigger: AGATGGCATTTTCTCAACTCACTGTTTACTGTCTCT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACCCGCAAGGGGAGTCTaGACCCGCCCAATCCTGCAA +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTPARGV*TRPILQ
Trigger: TTGCAGGATTGGGCGGGTGCAGACTCCCCTTGCGGG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAGAGCACCATGAAGCGTaGTGCATAGCAAAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSEHHEA*CIAKGV
Trigger: CACCCCTTTTGCTATGCACCACGCTTCATGGTGCTC...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCACACCCAGGACAGATaGCAGCACCAGAGACAGGTG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVHTQDR*QHQRQV
Trigger: CACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGCAGCTCTGTCCTGCTaGGAGTCTGGTCATGTGTGG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVAALSC*ESGHVW
Trigger: CCACACATGACCAGACTCCCAGCAGGACAGAGCTGC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTAC +
Preference number: 2 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHSGCRM*VHHADY
Trigger: GTAGTCAGCATGGTGGACCCACATCCTACAGCCAGA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACCCTGCCACCGCATGTaGGGCACACCAGGATCAGGT +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTPCHRM*GTPGSG
Trigger: ACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCTGCCAGAGCCCTTCTaGCACACAAATTACCCCCAG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVLPEPF*HTNYPQ
Trigger: CTGGGGGTAATTTGTGTGTCAGAAGGGCTCTGGCAG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACCCTGTTGTTAACCCCTaGCCTCAGGAAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDPVVNP*PQENYL
Trigger: CAGGTAGTTTTCCTGAGGCCAGGGGTTAACAACAGG...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACG +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTPGKGY*RRPSDT
Trigger: CGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCG +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTQRSLE*SEGSAS
Trigger: CGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCAT +
Preference number: 2 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNNANPG*RSSMSH
Trigger: ATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCCTGTTGTTAACCCCTaGCCTCAGGAAAACTACCTG +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVPVVNP*PQENYL
Trigger: CAGGTAGTTTTCCTGAGGCCAGGGGTTAACAACAGG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTTTTACTTAACATGCTaGCATGTCCAGCTATCCCCA +
Preference number: 2 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQFYLTC*HVQLSP
Trigger: TGGGGATAGCTGGACATGTCAGCATGTTAAGTAAAA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTAT +
Preference number: 2 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKVFRSF*RKSFLY
Trigger: ATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAAC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGCGGTACAGCGATCCTaGACTTCTAGCCTCTTTTCA +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTAVQRS*TSSLFS
Trigger: TGAAAAGAGGCTAGAAGTCCAGGATCGCTGTACCGC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCTCCGTTCAGAATTGTaGAGTCGTGTCATTAACTAC +
Preference number: 2 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVLRSEL*SRVINY
Trigger: GTAGTTAATGACACGACTTCACAATTCTGAACGGAG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR TCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAACTATGGTCATGGGCTaGGAAGTAGATTTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: CQDVSSQQAATTDATFKTTMVMG*EVDLGD
Trigger: GTCACCCAAATCTACTTCTCAGCCCATGACCATAGT...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp AGGGTGCCCAGGCCGAGGGTGGAGCAGCGCAAGGCTTaGCCGCCGCCGGGAGAGGGGACGCCGTCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: RVPRPRVEQRKA*PPPGEGTPSQA
Trigger: AGCCTGGGACGGCGTCCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCACCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GCGGCCACGGGGAGAGCCGAGGCAGGCAGTCTGACGTaGACGGCCCAGCTGGCCAATTGTGGGCGCGGCTTG +
Preference number: 3 (lower is better)
Translates to: AATGRAEAGSLT*TAQLANCGRGL
Trigger: CAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGGCTCTCCCCGTGGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp ACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCCCGAGCAGCGGTCTCT +
Preference number: 3 (lower is better)
Translates to: TLPARVVVRSAR*SAWAGPRAAVS
Trigger: AGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TCCTGCCACAGCCAGTGCAGTGGGAGCCCTGGCAGGTaGTGGGCCTGTGGGGCCCGGGCTGAGGAAGTGGCC +
Preference number: 3 (lower is better)
Translates to: SCHSQCSGSPGR*WACGARAEEVA
Trigger: GGCCACTTCCTCAGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCTCCCACTGCACTGGCTGTGGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp TCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTaGCAGCCCCGAGACGGCCGAGGCTTCACACGTCTG +
Preference number: 3 (lower is better)
Translates to: SAWPPGPPHPHT*QPRDGRGFTRL
Trigger: CAGACGTGTGAAGCCTCGGCCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp GCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTaGGCAGGCCCCCGAGCAGCGGTCTCTGGAATGCTC +
Preference number: 3 (lower is better)
Translates to: ARVVVRSARWSA*AGPRAAVSGML
Trigger: GAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CAGCCTGGGCAGGCCCCCGAGCAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCGGGCTGTGGGGGTGCC +
Preference number: 3 (lower is better)
Translates to: QPGQAPEQRSLE*SEGSASGCGGA
Trigger: GGCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTGCTCGGGGGCCTGCCCAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TTCTGCTTCGGGCTGTGGGGGTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGGCTTCTGTTCCACACC +
Preference number: 3 (lower is better)
Translates to: FCFGLWGCPRPR*GHGEARLLFHT
Trigger: GGTGTGGAACAGAAGCCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GCCTGGCAGCAGGGAGCAGCCCGAGCCACGGTGTCCTaGAGAAACTGCTCGAGGCGAGGGGAGAGGGGACGT +
Preference number: 3 (lower is better)
Translates to: AWQQGAARATVS*RNCSRRGERGR
Trigger: ACGTCCCCTCTCCCCTCGCCTCGAGCAGTTTCTTCAGGACACCGTGGCTCGGGCTGCTCCCTGCTGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CTCAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGAGACGTCCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: LRWAPWRPARSV*LGRATGDVPVT
Trigger: TGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp AGGGGCCCGCAAGGGGAGTCTGCACCCGCCCAATCCTaGAACGGCCCAAGGAGACAGTGGCACTGCCACCCT +
Preference number: 3 (lower is better)
Translates to: RGPQGESAPAQS*NGPRRQWHCHP
Trigger: AGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGCAGACTCCCCTTGCGGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CAGCCCCGAGACGGCCGAGGCTTCACACGTCTGCCCTaGCACCGCATGTGGGGCACACCAGGATCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: QPRDGRGFTRLP*HRMWGTPGSGG
Trigger: TCCACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: SGYVCGTLRWAP*RPARSVCLGRA
Trigger: AGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACAGACGTAACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGAC +
Preference number: 3 (lower is better)
Translates to: LCLATGASSPAHLPAPRRALRTT*LSETVD
Trigger: GTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGC +
Preference number: 3 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVGPAGQ*WARLVG
Trigger: GCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp ACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: TRGSSRRHASAF*RFLRLTRSFSE
Trigger: CTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR CCA 72 bp GGCTCGGCTTCTGTTCCACACCTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGACCAGGCGGCTCACTC +
Preference number: 3 (lower is better)
Translates to: GSASVPHLPPSG*DQAVLGPGGSL
Trigger: GAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAGCCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp AGGCAGTCTGACGTGCACGGCCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAGTGGCACAGGTGTGAC +
Preference number: 3 (lower is better)
Translates to: RQSDVHGPAGQL*ARLVGEWHRCD
Trigger: GTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp GCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACGCACTGCTGCTTCTGG +
Preference number: 3 (lower is better)
Translates to: ASRQERLPGKGY*RRPSDTHCCFW
Trigger: CCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTaGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SCHSGYVCGTLR*APWRPARSVCL
Trigger: CAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp GCACCCGCCCAATCCTGCAACGGCCCAAGGAGACAGTaGCACTGCCACCCTACTGGGGCTGTGCACAGGGTG +
Preference number: 3 (lower is better)
Translates to: APAQSCNGPRRQ*HCHPTGAVHRV
Trigger: CACCCTGTGCACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTGGGGGCCACACCAGGA +
Preference number: 3 (lower is better)
Translates to: ASAWEGLLETSQ*HALLLLGATPG
Trigger: TCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp ACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCGGGGCTCACTCAGGCT +
Preference number: 3 (lower is better)
Translates to: TWPPVCHQSTAS*KAQRMSGLTQA
Trigger: AGCCTGAGTGAGCCCCGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GGCATGCAGCAAGATGACGGGATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTCACCCGCCCACCCCTG +
Preference number: 3 (lower is better)
Translates to: GMQQDDGMEKHT*GPPSAVTRPPL
Trigger: CAGGGGTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp TGGGGACACGGAGAGGCTCGGCTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACCAGGCCGTACTTGGAC +
Preference number: 3 (lower is better)
Translates to: WGHGEARLLFHT*LPQGGTRPYLD
Trigger: GTCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAGCCGAGCCTCTCCGTGTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp AACCAGAGGGTCAGGCTTCCAGGCCCGGCTGCGGCTTaGACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: NQRVRLPGPAAA*TWLSVVTRASA
Trigger: GGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGCCGGGCCTGGAAGCCTGACCCTCTGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GCCCAATCCTGCAACGGCCCAAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTGCACAGGGTGACGGTC +
Preference number: 3 (lower is better)
Translates to: AQSCNGPRRQWH*HPTGAVHRVTV
Trigger: GACCGTCACCCTGTGCACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp AGGGTCAGGCTTCCAGGCCCGGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCAC +
Preference number: 3 (lower is better)
Translates to: RVRLPGPAAACT*LSVVTRASALH
Trigger: GTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGCCGGGCCTGGAAGCCTGACCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp CCGTGCAGGGGAGAAAGGAGGTGTCAGCCCAGCTGTTaGGATCAGTGTACTCCCCGGCCCTCCCTTGGGCTG +
Preference number: 3 (lower is better)
Translates to: PCRGERRCQPSC*DQCTPRPSLGL
Trigger: CAGCCCAAGGGAGGGCCGGGGAGTACACTGATCCCAACAGCTGGGCTGACACCTCCTTTCTCCCCTGCACGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTAATCCCCCAGAGGAGTaGCCTTCTGCTAAATCCACC +
Preference number: 3 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLNPPEE*PSAKST
Trigger: GGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATT...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGAATCCCCCAGAGGAGTaGCCTTCTGCTAAATCCACC +
Preference number: 3 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLNPPEE*PSAKST
Trigger: GGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATT...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR GCA 72 bp CACCCGCCCACCCCTGACATGGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCTCGTCCGAACACATGG +
Preference number: 3 (lower is better)
Translates to: HPPTPDMETEGR*CQQQRARPNTW
Trigger: CCATGTGTTCGGACGAGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TGCACGGCCCAGCTGGCCAATTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTGACAGTTCGCACACAT +
Preference number: 3 (lower is better)
Translates to: CTAQLANCGRGL*ASGTGVTVRTH
Trigger: ATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp GGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGTGGAAAATGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: GRGFTRLPCHRM*GTPGSGGKCPC
Trigger: GCAAGGGCATTTTCCACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGGGACCAGGCCGTACTaGGACCAGGCGGCTCACTCG +
Preference number: 3 (lower is better)
Translates to: EEAANLQMLCSVDTALHTGTRPY*DQAAHS
Trigger: CGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGGGGTCCGGCGAGGCTaGCGCTCAGGAGACAGAACC +
Preference number: 3 (lower is better)
Translates to: EEAANLQMLCSVDTALHTGVRRG*RSGDRT
Trigger: GGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCCC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGCAGGGATGTCCCTGTaGTTAACCCCTGGCCTCAGG +
Preference number: 3 (lower is better)
Translates to: ACTWLSVVTRASALHVSRAGMSL*LTPGLR
Trigger: CCTGAGGCCAGGGGTTAACAACAGGGACATCCCTGC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GTTGGGATCAGTGTACTCCCCGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTGCGGACAGAATGGTCG +
Preference number: 3 (lower is better)
Translates to: VGISVLPGPPLG*QGMTPLRTEWS
Trigger: CGACCATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCCGGGGAGTACACTGATCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp CGAGGCAGCAATAATGACCAGGTAGCCTGCCGACACTaGCCTCGCCTGGCTAGGACCCCGGTGCGCACATTC +
Preference number: 3 (lower is better)
Translates to: RGSNNDQVACRH*PRLARTPVRTF
Trigger: GAATGTGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTCGGCAGGCTACCTGGTCATTATTGCTGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACACCAGGACTTCAACCCA +
Preference number: 3 (lower is better)
Translates to: GKGYWRRPSDTH*CFWGPHQDFNP
Trigger: TGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp TACTGGAGACGTCCCAGTGACACGCACTGCTGCTTCTaGGGGCCACACCAGGACTTCAACCCAGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: YWRRPSDTHCCF*GPHQDFNPEGR
Trigger: CCTCCCCTCTGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: PETAEASHVCPATACGAHDSSHT*VLPKKH
Trigger: GTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GTGTACTCCCCGGCCCTCCCTTGGGCTGACAAGGAATaGCCCCGCTGCGGACAGAATGGTCGTTTAAGGACC +
Preference number: 3 (lower is better)
Translates to: VYSPALPWADKE*PRCGQNGRLRT
Trigger: GGTCCTTAAACGACCATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCCGGGGAGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp AAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAGGACTTCAACCCAGAG +
Preference number: 3 (lower is better)
Translates to: KGYWRRPSDTHC*FWGPHQDFNPE
Trigger: CTCTGGGTTGAAGTCCTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CAAGTCCAGGCCTTCGCCCAGGGGTCCGGCGAGGCTTaGGCTCAGGAGACAGAACCACATTCATGCTTGATG +
Preference number: 3 (lower is better)
Translates to: QVQAFAQGSGEA*AQETEPHSCLM
Trigger: CATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCCCTGGGCGAAGGCCTGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGATaGTGTGCAGCGTCGACACTGCCCTCCACACTTCAC +
Preference number: 3 (lower is better)
Translates to: EAPAEKRLRICR*CAASTLPSTLH
Trigger: GTGAAGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTaGAGATGCTGTGCAGCGTCGACACTGCCCTCCACA +
Preference number: 3 (lower is better)
Translates to: RTEAPAEKRLRI*RCCAASTLPST
Trigger: TGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp CGGAGACCGTTGACGGCATGCAGCAAGATGACGGGATaGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: RRPLTACSKMTG*RNTPAGLPQQS
Trigger: TGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp CCTGAGCAAAGGGCTCCCCTGTTCAACTGGCTGTTGTaGCATCGAAGGGACACAGGTGCTGTCCCTCGGCAG +
Preference number: 3 (lower is better)
Translates to: PEQRAPLFNWLL*HRRDTGAVPRQ
Trigger: CTGCCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GAAGTGTGGCTAGTCTATTATAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCG +
Preference number: 3 (lower is better)
Translates to: EVWLVYYKTCQV*SRVAPPAGTRP
Trigger: CGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGACTAGCCACACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
3UTR GCA 72 bp GTTCAACTGGCTGTTGTGGCATCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACTGCTCTGGGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: VQLAVVASKGHR*CPSAETALGRK
Trigger: CTTCCTCCCCAGAGCAGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp ACCGGCAGAGAAGAGGCTGCGAATCTGCAGATGCTGTaGAGCGTCGACACTGCCCTCCACACTTCACAGACC +
Preference number: 3 (lower is better)
Translates to: TGREEAANLQML*SVDTALHTSQT
Trigger: GGTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp CCAGCTGGCCAATTGTGGGCGCGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCGCACACATTGGTTTTG +
Preference number: 3 (lower is better)
Translates to: PAGQLWARLVGE*HRCDSSHTLVL
Trigger: CAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTTCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCG +
Preference number: 3 (lower is better)
Translates to: SVCLGRATGDVPVTRTAASHTLV*PKKHPS
Trigger: CGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGA...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp ACGTGGGCCGTATGCCACCAGCTCTACGCACAACGTTaGTTTCGGAGACCGTTGACGGCATGCAGCAAGATG +
Preference number: 3 (lower is better)
Translates to: TWAVCHQLYAQR*FRRPLTACSKM
Trigger: CATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTGGCATACGGCCCACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp GAGAAGCTGCCTGAGCAAAGGGCTCCCCTGTTCAACTaGCTGTTGTGGCATCGAAGGGACACAGGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: EKLPEQRAPLFN*LLWHRRDTGAV
Trigger: GACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGGCAGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp AGAGGGGACGCCGTCCCAGGCTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACACACTCAGAACAGAGA +
Preference number: 3 (lower is better)
Translates to: RGDAVPGCCPLC*VHERKTHSEQR
Trigger: TCTCTGTTCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCAGCCTGGGACGGCGTCCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp CACCAGACGCCATCAAGCAAAAGGGGTGCTGGAATGTaGCGTTGGCATGGTCGACATCCATGGGACACGTGG +
Preference number: 3 (lower is better)
Translates to: HQTPSSKRGAGM*RWHGRHPWDTW
Trigger: CCACGTGTCCCATGGATGTCGACCATGCCAACGTCACATTCCAGCACCCCTTTTGCTTGATGGCGTCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp TCACAAGACAGACTAGACACAGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGGCCACCGGGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: SQDRLDTVQQEK*NAGSAWPPGPP
Trigger: AGGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCACTGTGTCTAGTCTGTCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGAC +
Preference number: 3 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMALRTT*LSETVD
Trigger: GTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAG +
Preference number: 3 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPVGPRD*ESVVIK
Trigger: CTTAATTACCACAGATTCCAAATCTCTAGGCCCCAC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp TACGCACAACGTTGCTTTCGGAGACCGTTGACGGCATaGAGCAAGATGACGGGATGGAGAAACACACCTGCG +
Preference number: 3 (lower is better)
Translates to: YAQRCFRRPLTA*SKMTGWRNTPA
Trigger: CGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CCA 72 bp CTTCCTTTGTCCAACATCACCTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTACCACCAGACGCCATCA +
Preference number: 3 (lower is better)
Translates to: LPLSNITSGCRM*VHHADYHQTPS
Trigger: TGATGGCGTCTGGTGGTAGTCAGCATGGTGGACCCACATCCTACAGCCAGAGGTGATGTTGGACAAAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp GACACCTTCGAGGGAACAGTAGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTATGAGCAGGGACACACG +
Preference number: 3 (lower is better)
Translates to: DTFEGTVVFRSF*RKSFLYEQGHT
Trigger: CGTGTGTCCCTGCTCATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAACTACTGTTCCCTCGAAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCATCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCG +
Preference number: 3 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSSHTLV*PKKHPS
Trigger: CGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGA...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCAGACTCCCCTTCCTTaGTCCAACATCACCTCTGGC +
Preference number: 3 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVQTPLP*SNITSG
Trigger: GCCAGAGGTGATGTTGGACAAAGGAAGGGGAGTCTG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp CATGCACAAACGACTCAGTTGGTTTCTGTAAAGTACTaGGCAGCTCTGTCCTGCTGGGAGTCTGGTCATGTG +
Preference number: 3 (lower is better)
Translates to: HAQTTQLVSVKY*AALSCWESGHV
Trigger: CACATGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGAGTCGTTTGTGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp AGGCTTGCGCTCAGGAGACAGAACCACATTCATGCTTaGTGGCTCCTAGAATTGACACAAATCCCAACCTGG +
Preference number: 3 (lower is better)
Translates to: RLALRRQNHIHA*WLLELTQIPTW
Trigger: CCAGGTTGGGATTTGTGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GTACAGCGATCCTGGACTTCTAGCCTCTTTTCACGGTaGGAGTTCACAAGACAGACTAGACACAGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: VQRSWTSSLFSR*EFTRQTRHSAA
Trigger: TGCTGCACTGTGTCTAGTCTGTCTTGTGAACTCTCACCGTGAAAAGAGGCTAGAAGTCCAGGATCGCTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp TCTAATCACAGTTGGACACTGAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCTGGGCAGGCACAGGCT +
Preference number: 3 (lower is better)
Translates to: SNHSWTLRDSKQ*VEKMPSGQAQA
Trigger: AGCCTGTGCCTGCCCAGATGGCATTTTCTCAACTCACTGTTTACTGTCTCTCAGTGTCCAACTGTGATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp TACGAAGGTGACGGGGAAGCAGACCGGCTTAATTCATaGACAAACGACTCAGTTGGTTTCTGTAAAGTACTG +
Preference number: 3 (lower is better)
Translates to: YEGDGEADRLNS*TNDSVGFCKVL
Trigger: CAGTACTTTACAGAAACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTCTGCTTCCCCGTCACCTTCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR TCA 72 bp GATTTGCAAACGGAAAACAGAACTATGGTCATGGGCTaGGAAGTAGATTTGGGTGACAGACCCTCATTCACC +
Preference number: 3 (lower is better)
Translates to: DLQTENRTMVMG*EVDLGDRPSFT
Trigger: GGTGAATGAGGGTCTGTCACCCAAATCTACTTCTCAGCCCATGACCATAGTTCTGTTTTCCGTTTGCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR-3UTR CAA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCAACACCTACAGGATTTaGTTTAGAACTCCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVNTYRI*FRTPKF
Trigger: GAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR GCA 72 bp CCTACAGGCATTTCTTACAGAAATCACCGGACATCATaGCAGCTTGTGTGTTTTCCAATTAAGTCATTGAAT +
Preference number: 3 (lower is better)
Translates to: PTGISYRNHRTS*QLVCFPIKSLN
Trigger: ATTCAATGACTTAATTGGAAAACACACAAGCTGGCATGATGTCCGGTGATTTCTGTAAGAAATGCCTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp GAGGGTGCCCAGGCCGAGGGTGGAGCAGCGCAAGGCTaGCCCGCCGCCGGGAGAGGGGACGCCGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EGAQAEGGAAQG*PAAGRGDAVPG
Trigger: GCCTGGGACGGCGTCCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCACCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCCAGTGCCCTTCACGTaGGCCGGGCCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRPVPFT*AGPRPA
Trigger: GGCTGGCCTGGGCCCGGCTCACGTGAAGGGCACTGG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCCAGTGCCCTTCACGTaGGCCGGGCCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSPVPFT*AGPRPA
Trigger: GGCTGGCCTGGGCCCGGCTCACGTGAAGGGCACTGG...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTAGCCCTGGCAGGTGGTaGGCCTGTGGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRSPGRW*ACGARA
Trigger: AGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCT...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCCGAGGCAGGCAGTCTaGCGTGCACGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSPRQAV*RARPSW
Trigger: CCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGG...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGTGGCCAGCGCCAAGTaGGGGTGCCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPVASAK*GCPGRG
Trigger: CCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCAC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGGGAGGGCCGATCACTaGCCAAGGGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRGRADH*PRGHWA
Trigger: GGCCCAGTGGCCCCTTGGGCAGTGATCGGCCCTCCC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGCCTCACGCCGCCTaGTGGCCCGGCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPPPHAA*WPGSLM
Trigger: CATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGGCGG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCTCACCCGCACACCTaGCAGCCCCGAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLPHPHT*QPRDGR
Trigger: TCGGCCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCATTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTTTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSVRSAR*SAWAGP
Trigger: GGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGAC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRLRWAP*RPARSV
Trigger: GACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGTGGCCAGCGCCAAGTaGGGGTGCCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHVASAK*GCPGRG
Trigger: CCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCAC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGACCCTGGAGCAGGCTaGCGTGGTCTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSDPGAG*RGLGGS
Trigger: GCTGCCTCCCAGACCACGTCAGCCTGCTCCAGGGTC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGCTGGCCCGGCTCCCTaGTGCCACCGTGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPAGPAP*CHRACD
Trigger: GTCACAGGCACGGTGGCATCAGGGAGCCGGGCCAGC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGAAGTCCCGGCTGGGCTaGAACCCCGGCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWKSRLG*NPGSRT
Trigger: CGTGCGCGAGCCGGGGTTGCAGCCCAGCCGGGACTT...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGAAGTCCCGGCTGGGCTaGAACCCCGGCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLKSRLG*NPGSRT
Trigger: CGTGCGCGAGCCGGGGTTGCAGCCCAGCCGGGACTT...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGGCCCGGCTGCGGCTTaGACGTGGCTCAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSGPAAA*TWLSVV
Trigger: GACCACACTGAGCCACGTGCAAGCCGCAGCCGGGCC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGCTTCCAGGCCCGGCTaGGGCTTGCACGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLASRPG*GLHVAQ
Trigger: CTGAGCCACGTGCAAGCCGCAGCCGGGCCTGGAAGC...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGCTTCCAGGCCCGGCTaGGGCTTGCACGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSASRPG*GLHVAQ
Trigger: CTGAGCCACGTGCAAGCCGCAGCCGGGCCTGGAAGC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCCTTCCCGCCAGGGTaGTGGTCAGGAGCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRPFPPG*WSGAPV
Trigger: AACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTCTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPLRWAP*RPARSV
Trigger: GACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAG...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTGCCCAGGCCGAGGGTaGAGCAGCGCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVCPGRG*SSARLA
Trigger: GGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCCGGGCTGAGGAAGTaGCCCAAGGAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRPGLRK*PKEQEP
Trigger: GGGCTCCTGCTCCTTGGGCCACTTCCTCAGCCCGGG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCGAGGCAGGCAGTCTaGCGTGCACGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVPRQAV*RARPSW
Trigger: CCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGCTGGCCCGGCTCCCTaGTGCCACCGTGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHAGPAP*CHRACD
Trigger: GTCACAGGCACGGTGGCATCAGGGAGCCGGGCCAGC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSSGGLV*SAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCT...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSSRLTC*TAELAS
Trigger: CGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCTCAGGGCACAGGGGTaGGACGGAGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRLRAQG*DGGHFQ
Trigger: CTGGAAGTGCCCTCCGTCGCACCCCTGTGCCCTGAG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGGAGGGCCGATCACTaGCCAAGGGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHGRADH*PRGHWA
Trigger: GGCCCAGTGGCCCCTTGGGCAGTGATCGGCCCTCCC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCTGGAAAGTCCCGGCTaGGCTGCAACCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLLESPG*AATPAR
Trigger: GCGAGCCGGGGTTGCAGCCCAGCCGGGACTTTCCAG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGCCCTTCCCGCCAGGGTaGTGGTCAGGAGCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWPFPPG*WSGAPV
Trigger: AACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGG...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCAGCACCAGAGACAGGTaGGCCACCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSSTRDR*ATGHPP
Trigger: TGGTGGGTGCCCGGTGGCCCACCTGTCTCTGGTGCT...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCAGCACCAGAGACAGGTaGGCCACCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLSTRDR*ATGHPP
Trigger: TGGTGGGTGCCCGGTGGCCCACCTGTCTCTGGTGCT...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCTCAGGTGGGCCCCATaGCGTCCCGCCAGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSLRWAP*RPARSV
Trigger: GACGCTCCTGGCGGGACGCCATGGGGCCCACCTGAG...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCACCATGGCCCCAGGCTaGCCCAGGTGGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSTMAPG*PRWPAP
Trigger: TGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCACAGCCAGTGCAGTaGGAGCCCTGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLPQPVQ*EPWQVV
Trigger: CACCACCTGCCAGGGCTCCCACTGCACTGGCTGTGG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGGGCTGTGCACAGGGTaGCGGTCCTCAGGCCAATCC +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLGLCTG*RSSGQS
Trigger: GGATTGGCCTGAGGACCGTCACCCTGTGCACAGCCC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGTAGCCTGCCGACACTaGCCTCGCCTGGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLVACRH*PRLART
Trigger: GGTCCTAGCCAGGCGAGGTCAGTGTCGGCAGGCTAC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPSGGLV*SAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGGTCTGCTTCGGGCTaGACAGCACCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLRSASG*TAPGGT
Trigger: AGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCGGTCTGCTTCGGGCTaGACAGCACCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRRSASG*TAPGGT
Trigger: AGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGCAGGGCCGCCATaGAGCTCTCGCAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVSAGPP*SSRRSG
Trigger: ACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLSRLTC*TAELAS
Trigger: CGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVFSRLT*CTAELA
Trigger: GGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCGCTTCCTCCCAGTTCTaGCGGAAGGGCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVASSQF*RKGRIS
Trigger: GGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGC...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGTTCCGAGCCACTTaGCCCGCGCTCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSVFRAT*PALLST
Trigger: CGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACAC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGTGTTCCGAGCCACTTaGCCCGCGCTCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSVFRAT*PALLST
Trigger: CGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACAC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPPARSV*LGRATG
Trigger: TCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGAGCAGCGCAAGGCTTaGCCGCCGCCGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFEQRKA*PPPGEG
Trigger: CCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGGGTCCGGCGAGGCTTaGGCTCAGGAGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRGSGEA*AQETEP
Trigger: TGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGCACCCGCCCAATCCTaGAACGGCCCAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRAPAQS*NGPRRQ
Trigger: CTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCGCGGTCTCCAGGACCTaGAAGCGCAGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVAVSRT*KRRSMS
Trigger: CGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGC...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGCGGCTGCCGCCGGCTaGAAAGTCCCGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFAAAAG*KVPAGL
Trigger: CAGCCCAGCCGGGACTTTCCAGCCGGCGGCAGCCGC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGGACCAGGCCGTACTTaGACCAGGCGGCTCACTCGT +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSGPGRT*TRRLTR
Trigger: ACGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGCCCGTTGGTCAGCCTaGGCAGGCCCCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSARWSA*AGPRAA
Trigger: CGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGGGCAGGCACAGGCTaGGACGACGGGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFWAGTG*DDGPRG
Trigger: GCCACGGGGCCCGTCGTCCCAGCCTGTGCCTGCCCA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGGGACAGGCCTCAGGTaGGGGACACCTTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRGTGLR*GTPSRE
Trigger: TTCCCTCGAAGGTGTCCCCCACCTGAGGCCTGTCCC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCTCAGGTTACGTCTGTaGGACCCTCAGGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRLRLRL*DPQVGP
Trigger: GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTAGCCCTGGCAGGTGGTaGGCCTGTGGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFSPGRW*ACGARA
Trigger: AGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCT...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGGCCACACGGGGTCATaGGGAAGCCTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPGHTGS*GSLLPQ
Trigger: CTGTGGCAGGAGGCTTCCCCATGACCCCGTGTGGCC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGGCCACACGGGGTCATaGGGAAGCCTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLGHTGS*GSLLPQ
Trigger: CTGTGGCAGGAGGCTTCCCCATGACCCCGTGTGGCC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCGGCCCAAGGAGACAGTaGCACTGCCACCCTACTGGG +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVGPRRQ*HCHPTG
Trigger: CCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCC...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLPCHRM*GTPGSG
Trigger: ACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGCGAGCCACGGTGTCCTaGAGAAACTGCTCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRRATVS*RNCSRR
Trigger: TCGCCTCGAGCAGTTTCTTCAGGACACCGTGGCTCG...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACCCAGTGCCCTTCACGTaGGCCGGGCCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHPVPFT*AGPRPA
Trigger: GGCTGGCCTGGGCCCGGCTCACGTGAAGGGCACTGG...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTGGGAGGGCCGGGGATTaGGCAAGGGGCCCGCAAGGG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPGRAGD*ARGPQG
Trigger: CCCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCC...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGTAGCCTGCCGACACTaGCCTCGCCTGGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVVACRH*PRLART
Trigger: GGTCCTAGCCAGGCGAGGTCAGTGTCGGCAGGCTAC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVSGGLV*SAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCT...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGGTCTGCTTCGGGCTaGACAGCACCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPRSASG*TAPGGT
Trigger: AGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGCTTCCTCCCAGTTCTaGCGGAAGGGCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPASSQF*RKGRIS
Trigger: GGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGCTTCCTCCCAGTTCTaGCGGAAGGGCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLASSQF*RKGRIS
Trigger: GGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCTCAGCATCTGGTCATaGCGGCTCAGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVLSIWS*RLSWDS
Trigger: GGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAG...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLHASAF*RFLRLT
Trigger: TGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCGGTCCGCAGCGTTCTaGTCCCCGGGCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFRSAAF*SPGCPM
Trigger: CATGGGGCAGCCCGGGGAGCAGAACGCTGCGGACCG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGGCACGTGGGCCGTATaGCACCAGCTCTACGCACAA +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRGTWAV*HQLYAQ
Trigger: TTGTGCGTAGAGCTGGTGGCATACGGCCCACGTGCC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPPSDTH*CFWGPH
Trigger: GTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVPARSV*LGRATG
Trigger: TCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGCCATTTCCCGCTTGCTaGCAGGGCCCTGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWPFPAC*QGPVMR
Trigger: CCGCATCACAGGGCCCTGGCAGCAAGCGGGAAATGG...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGCCCCCATTTCCCGCTTaGTGCCAGGGCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWPPFPA*CQGPVM
Trigger: CATCACAGGGCCCTGGCAGCAAGCGGGAAATGGGGG...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGGCCAATCCTCCCCGTaGAGGGGAGAAAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLGQSSP*RGERRC
Trigger: ACACCTCCTTTCTCCCCTGCACGGGGAGGATTGGCC...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGGTGGAAAATGCCCTTaGAGTGAGCTGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRGGKCP*SELLAP
Trigger: CGGGGCCAGCAGCTCACTGCAAGGGCATTTTCCACC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPSVTRF*RDSTLL
Trigger: GAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGGACCAGGCCGTACTTaGACCAGGCGGCTCACTCGT +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLGPGRT*TRRLTR
Trigger: ACGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCCCTTCCCGCCAGGGTaGTGGTCAGGAGCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLPFPPG*WSGAPV
Trigger: AACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVPAGQL*ARLVGE
Trigger: CTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCGTGCACGGCCCAGCTaGCCAATTGTGGGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLRARPS*PIVGAA
Trigger: AGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGCCCAGGCCGAGGGTaGAGCAGCGCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLCPGRG*SSARLA
Trigger: GGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCA...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTAGAAGGGCACGGGGATaGGGCAGGGAAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRRRARG*GREGER
Trigger: CCTTTCTCCTTCCCTGCCCCATCCCCGTGCCCTTCT...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGGCCACACGGGGTCATaGGGAAGCCTCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVGHTGS*GSLLPQ
Trigger: CTGTGGCAGGAGGCTTCCCCATGACCCCGTGTGGCC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCATGGTCGACATCCATaGGACACGTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLHGRHP*DTWPLA
Trigger: GGCCAGGGGCCACGTGTCCCATGGATGTCGACCATG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCGAGAGGACCCCTaGTCCATCAGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLRREDP*SISMSV
Trigger: GACACTCATGCTGATGGATCAGGGGTCCTCTCGACG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCGTCGAGAGGACCCCTaGTCCATCAGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRRREDP*SISMSV
Trigger: GACACTCATGCTGATGGATCAGGGGTCCTCTCGACG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPLETSQ*HALLLL
Trigger: CAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTATGCCACCGTGCCTGTaGCCATCAGCATCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPMPPCL*PSASAW
Trigger: CCAGGCTGATGCTGATGGTCACAGGCACGGTGGCAT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSALRSV*SFSGGL
Trigger: TAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTGGCGTCCCAGCACTaGGGTCAGTGTGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRLASQH*GQCAAL
Trigger: TAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTCTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPLSQKR*PHSVCF
Trigger: GAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAG...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTCAGCAGGGCCGCCATaGAGCTCTCGCAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVSAGPP*SSRRSG
Trigger: ACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRGESGR*TCEGRT
Trigger: TGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRGESGR*TCEGRT
Trigger: TGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVFSRLT*CTAELA
Trigger: GGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCTCAGCATCTGGTCATaGCGGCTCAGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLLSIWS*RLSWDS
Trigger: GGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLETEGR*CQQQRA
Trigger: AGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTC...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLLLFHT*LPQGGT
Trigger: GGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAG...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGAGCAGCGCAAGGCTTaGCCGCCGCCGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVEQRKA*PPPGEG
Trigger: CCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTCCCAAGCACACAGTGTaGGCCCCCATTTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPPKHTV*APISRL
Trigger: CAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGG...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGGTCACAAGAGCCAGTaGCCTTCACGTGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSGHKSQ*PSREPG
Trigger: GCCCGGCTCACGTGAAGGGCACTGGCTCTTGTGACC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGGTCACAAGAGCCAGTaGCCTTCACGTGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVGHKSQ*PSREPG
Trigger: GCCCGGCTCACGTGAAGGGCACTGGCTCTTGTGACC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTAGAGGCAGGAGAAGCTaGCTGAGCAAAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPRGRRS*LSKGLP
Trigger: GGGGAGCCCTTTGCTCAGGCAGCTTCTCCTGCCTCT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLRRQWH*HPTGAV
Trigger: CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCT...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGCCGCCTCACGCCGCCTaGTGGCCCGGCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRPPHAA*WPGSLM
Trigger: CATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGGCGG...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTTGGGCCTTGATCTGCTaGTTTGTCCCCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRWALIC*FVPSLL
Trigger: GAGGAGCGAGGGGACAAACCAGCAGATCAAGGCCCA...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLAELAS*ALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGCGGTCTCCAGGACCTaGAAGCGCAGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHAVSRT*KRRSMS
Trigger: CGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGCACTCCATTGTAGCTaGCGGTCTCCAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSALHCS*RSPGPG
Trigger: TCCAGGTCCTGGAGACCGCCAGCTACAATGGAGTGC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCTGGAAAGTCCCGGCTaGGCTGCAACCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFLESPG*AATPAR
Trigger: GCGAGCCGGGGTTGCAGCCCAGCCGGGACTTTCCAG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPCPRPR*GHGEAR
Trigger: CCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCA...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGCCCGTTGGTCAGCCTaGGCAGGCCCCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPARWSA*AGPRAA
Trigger: CGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTCGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCG +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPRLVGE*HRCDSS
Trigger: CGAACTGTCACACCTGTGCCACTCGCCCACAAGCCG...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCG +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLRLVGE*HRCDSS
Trigger: CGAACTGTCACACCTGTGCCACTCGCCCACAAGCCG...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGGACAGGCCTCAGGTaGGGGACACCTTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHGTGLR*GTPSRE
Trigger: TTCCCTCGAAGGTGTCCCCCACCTGAGGCCTGTCCC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTAGAAGGGCACGGGGATaGGGCAGGGAAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPRRARG*GREGER
Trigger: CCTTTCTCCTTCCCTGCCCCATCCCCGTGCCCTTCT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAAGCCCTGGCAGGTGGTaGGCCTGTGGGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPSPGRW*ACGARA
Trigger: AGCCCGGGCCCCACAGGCCCACCACCTGCCAGGGCT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp GGCAGGCAGTCTGACGTGCACGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGCGAGTGGCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GRQSDVHGPAGQ*WARLVGEWHRC
Trigger: ACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCGCTGCCAGGGCCCTGTaGTGCGGGGAGGGCCGATCA +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTAARAL*CGEGRS
Trigger: TGATCGGCCCTCCCCGCATCACAGGGCCCTGGCAGC...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACCGAGCCACGGTGTCCTaGAGAAACTGCTCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHRATVS*RNCSRR
Trigger: TCGCCTCGAGCAGTTTCTTCAGGACACCGTGGCTCG...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCTGTGGGGCCCGGGCTaGGGAAGTGGCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAALWGPG*GSGPRS
Trigger: GCTCCTTGGGCCACTTCCTCAGCCCGGGCCCCACAG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGTGGGCTGACAAGGAATaGCCCCGCTGCGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLWADKE*PRCGQN
Trigger: ATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCA...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSGPPLG*QGMTPL
Trigger: CAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCTGGCGTCCCAGCACTaGGGTCAGTGTGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLLASQH*GQCAAL
Trigger: TAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLHASAF*RFLRLT
Trigger: TGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCCGGTCCGCAGCGTTCTaGTCCCCGGGCTGCCCCATG +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTRSAAF*SPGCPM
Trigger: CATGGGGCAGCCCGGGGAGCAGAACGCTGCGGACCG...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACATGCTCAGAGGGTTCTaGTTCGGGCTGTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHMLRGF*FGLWGC
Trigger: GCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCAT...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRQRSLE*SEGSAS
Trigger: CGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVQRSLE*SEGSAS
Trigger: CGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTG...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTTCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLSKGHR*CPSAET
Trigger: AGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGA...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCATGGCTAGGACCCCGGTaGGCACATTCTACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSWLGPR*AHSTLE
Trigger: CTCCAAAGTAGAATGTGCGCACCGGGGTCCTAGCCA...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGGTGCAGCGTCGACACTaGCCTCCACACTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWVQRRH*PPHFTD
Trigger: GTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCAC...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCAATCTGCAGATGCTGTaGAGCGTCGACACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSNLQML*SVDTAL
Trigger: GAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATT...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGCGAATCTGCAGATaGTGTGCAGCGTCGACACTG +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLLRICR*CAASTL
Trigger: CAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTAAGAGGCTGCGAATCTaGAGATGCTGTGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRKRLRI*RCCAAS
Trigger: CGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTT...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCGGCAGAGAAGAGGCTaGGAATCTGCAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSRQRRG*ESADAV
Trigger: CACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCG...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGCACTCCATTGTAGCTaGCGGTCTCCAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLALHCS*RSPGPG
Trigger: TCCAGGTCCTGGAGACCGCCAGCTACAATGGAGTGC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFCGRGL*ASGTGV
Trigger: CACACCTGTGCCACTCGCCCACAAGCCGCGCCCACA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCCAGGCTGGCCCAGGTaGCCAGCGCCAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPPGWPR*PAPSEG
Trigger: ACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGCACGTGGCTCAGTGTaGTCACAAGAGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHARGSV*SQEPVP
Trigger: GGGCACTGGCTCTTGTGACCACACTGAGCCACGTGC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLAAACT*LSVVTR
Trigger: TCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCAAAGCCAGGCCCCGTaGGTCCCCCACTTCCACACC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFQSQAP*VPHFHT
Trigger: GGTGTGGAAGTGGGGGACCCACGGGGCCTGGCTTTG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCAAAGCCAGGCCCCGTaGGTCCCCCACTTCCACACC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFQSQAP*VPHFHT
Trigger: GGTGTGGAAGTGGGGGACCCACGGGGCCTGGCTTTG...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTTGTCAGCCCAGCTGTTaGGATCAGTGTACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPCQPSC*DQCTPR
Trigger: CCGGGGAGTACACTGATCCCAACAGCTGGGCTGACA...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCGTCGAGAGGACCCCTaGTCCATCAGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSRREDP*SISMSV
Trigger: GACACTCATGCTGATGGATCAGGGGTCCTCTCGACG...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTTGTTGGGGTCGGGCTTaGATGCATCTCCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRCWGRA*MHLPND
Trigger: GTCATTTGGGAGATGCATTCAAGCCCGACCCCAACA...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGTTGGGGTCGGGCTTaGATGCATCTCCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSCWGRA*MHLPND
Trigger: GTCATTTGGGAGATGCATTCAAGCCCGACCCCAACA...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGATGCACAGCATCCATaGGCGAGGCTCCGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLDAQHP*ARLRSE
Trigger: TTCTGAACGGAGCCTCGCTCATGGATGCTGTGCATC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGAAGTCCTTCCTTTATaGGCAGGGACACACGACTCC +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRREVLPL*AGTHDS
Trigger: GGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGTGGCCAGCGCCAAGTaGGGGTGCCCAGGCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTVASAK*GCPGRG
Trigger: CCCTCGGCCTGGGCACCCTCACTTGGCGCTGGCCAC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCGAGCCACGGTGTCCTaGAGAAACTGCTCGAGGCGA +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLRATVS*RNCSRR
Trigger: TCGCCTCGAGCAGTTTCTTCAGGACACCGTGGCTCG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTGCCAGAGCCCTTCTaGCACACAAATTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPLPEPF*HTNYPQ
Trigger: CTGGGGGTAATTTGTGTGTCAGAAGGGCTCTGGCAG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGAGGTGCTGGGGGCATTaGCACACTCTGACAAGTGTG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLRCWGH*HTLTSV
Trigger: CACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCT...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPSGGLV*SAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCT...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGCCCACACTCGGTCTaGTTCGGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFCPHSV*FGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCA...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVGESGR*TCEGRT
Trigger: TGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFFSRLT*CTAELA
Trigger: GGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGGCTAGGCGGATGTCGTaGACACTCAGCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWARRMS*TLSIWS
Trigger: TGACCAGATGCTGAGTGTGCACGACATCCGCCTAGC...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTAGACCGTTGACGGCATaGAGCAAGATGACGGGATGG +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLRPLTA*SKMTGW
Trigger: CCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCT...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCCATTTCCCGCTTGCTaGCAGGGCCCTGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFPFPAC*QGPVMR
Trigger: CCGCATCACAGGGCCCTGGCAGCAAGCGGGAAATGG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGCTTCCAGGCCCGGCTaGGGCTTGCACGTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRASRPG*GLHVAQ
Trigger: CTGAGCCACGTGCAAGCCGCAGCCGGGCCTGGAAGC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGTGGTGGAATGGGGCTaGAATGTGGGTCATAAGGGC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPVVEWG*NVGHKG
Trigger: GCCCTTATGACCCACATTGCAGCCCCATTCCACCAC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTCCCTCGGCAGAGACTaGTCTGGGGAGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFSLGRD*SGEEGV
Trigger: CACCCCTTCCTCCCCAGAGCAGTCTCTGCCGAGGGA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTAGAGGCAGGAGAAGCTaGCTGAGCAAAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLRGRRS*LSKGLP
Trigger: GGGGAGCCCTTTGCTCAGGCAGCTTCTCCTGCCTCT...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGTGCAGCGTCGACACTaGCCTCCACACTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSVQRRH*PPHFTD
Trigger: GTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCAC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTTCAGGGACAAAAACTaGCGTCCCAGCACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPFRDKN*RPSTAV
Trigger: GACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGCACAGCACCAGGTaGCACTTCTCACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLLHSTR*HFSHLY
Trigger: GTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVCTLSI*SCRLSW
Trigger: CCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHCTLSI*SCRLSW
Trigger: CCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCA...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCACTCCATTGTAGCTaGCGGTCTCCAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSALHCS*RSPGPG
Trigger: TCCAGGTCCTGGAGACCGCCAGCTACAATGGAGTGC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTTGGGCCACAAAGACTaGGCAGCCAGAGGCGATATT +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVLGHKD*AARGDI
Trigger: AATATCGCCTCTGGCTGCCCAGTCTTTGTGGCCCAA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGAGCAAGATGACGGGATaGAGAAACACACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWSKMTG*RNTPAG
Trigger: GCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCT...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGCAGGCGGCTCACTCGTaGGGCCTAGAGATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWQAAHS*GLEIWN
Trigger: ATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTG...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGACACAAATCCCAACCTaGCCGCCTGTGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWTQIPT*PPVCHQ
Trigger: CTGGTGACACACAGGCGGCCAGGTTGGGATTTGTGT...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTAATGGGGCTGCAATGTaGGTCATAAGGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPNGAAM*VIRAPS
Trigger: AGAGGGGGCCCTTATGACCCACATTGCAGCCCCATT...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGCCCGGGCTGAGGAAGTaGCCCAAGGAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVPGLRK*PKEQEP
Trigger: GGGCTCCTGCTCCTTGGGCCACTTCCTCAGCCCGGG...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGTAGAGGGAGGAGTCTaGGAGGGCCGGGGATTGAGC +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSVEGGV*EGRGLS
Trigger: GCTCAATCCCCGGCCCTCCCAGACTCCTCCCTCTAC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGCTTGCAGTGAGCTGCTaGCCCCGCCTCACGCCGCCT +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPELAVSC*PRLTPP
Trigger: AGGCGGCGTGAGGCGGGGCCAGCAGCTCACTGCAAG...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp ACGTGCACGGCCCAGCTGGCCAATTGTGGGCGCGGCTaGTGGGCGAGTGGCACAGGTGTGACAGTTCGCACA +
Preference number: 4 (lower is better)
Translates to: TCTAQLANCGRG*WASGTGVTVRT
Trigger: TGTGCGAACTGTCACACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp CCCGTGCAGGGGAGAAAGGAGGTGTCAGCCCAGCTGTaGGGATCAGTGTACTCCCCGGCCCTCCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PVQGRKEVSAQL*GSVYSPALPWA
Trigger: AGCCCAAGGGAGGGCCGGGGAGTACACTGATCCCAACAGCTGGGCTGACACCTCCTTTCTCCCCTGCACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRCCPLC*VHERKT
Trigger: TGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCA...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGCTGCCAGGGCCCTGTaGTGCGGGGAGGGCCGATCA +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKAARAL*CGEGRS
Trigger: TGATCGGCCCTCCCCGCATCACAGGGCCCTGGCAGC...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGTTTTGTTACGAAGGTaGCGGGGAAGCAGACCGGCT +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSVLLRR*RGSRPA
Trigger: AGCCGGTCTGCTTCCCCGTCACCTTCGTAACAAAAC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVGPPLG*QGMTPL
Trigger: CAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACTGCCCACACTCGGTCTaGTTCGGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHCPHSV*FGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCA...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTGCCCACACTCGGTCTaGTTCGGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPCPHSV*FGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFLSQKR*PHSVCF
Trigger: GAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAG...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPDSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPDSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCTTTTCGAGCGAGTTaGTCCACTCCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVSFRAS*STPSAG
Trigger: ACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGGAGGGACTCCACGCTaGTCTTCATGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVGGTPR*SSCCLL
Trigger: AAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGGGGTCGGGCTTGAATaGATCTCCCAAATGACGTCG +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHGVGLE*ISQMTS
Trigger: CGACGTCATTTGGGAGATGCATTCAAGCCCGACCCC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPHASAF*RFLRLT
Trigger: TGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGCTCAGGGCACAGGGGTaGGACGGAGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVLRAQG*DGGHFQ
Trigger: CTGGAAGTGCCCTCCGTCGCACCCCTGTGCCCTGAG...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGGCCAATCCTCCCCGTaGAGGGGAGAAAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFGQSSP*RGERRC
Trigger: ACACCTCCTTTCTCCCCTGCACGGGGAGGATTGGCC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSRRQWH*HPTGAV
Trigger: CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGCCCTTGCAGTGAGCTaGTGGCCCCGCCTCACGCCG +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKALAVS*WPRLTP
Trigger: CGGCGTGAGGCGGGGCCAGCAGCTCACTGCAAGGGC...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCTTCACACGTCTGCCCTaGCACCGCATGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSFTRLP*HRMWGT
Trigger: TGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAA...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTTCAGGGACAAAAACTaGCGTCCCAGCACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVFRDKN*RPSTAV
Trigger: GACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCTGCACAGCACCAGGTaGCACTTCTCACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLLHSTR*HFSHLY
Trigger: GTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAG...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPSVTRF*RDSTLL
Trigger: GAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTGCGGTCTCCAGGACCTaGAAGCGCAGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPAVSRT*KRRSMS
Trigger: CGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGC...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGAGGTGTGCTCACGCGTaGCTCCTCCCGCCGGCACGC +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKRCAHA*LLPPAR
Trigger: GCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTVRSAR*SAWAGP
Trigger: GGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGAC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTGAGCACCATGAAGCGTaGTGCATAGCAAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLEHHEA*CIAKGV
Trigger: CACCCCTTTTGCTATGCACCACGCTTCATGGTGCTC...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEPAGQL*ARLVGE
Trigger: CTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCCAGCTGGCCAATTGTaGGCGCGGCTTGTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPPAGQL*ARLVGE
Trigger: CTCGCCCACAAGCCGCGCCCACAATTGGCCAGCTGG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTTGTGGGACCCTCAGGTaGGCCCCATGGCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTCGTLR*APWRPA
Trigger: GGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACA...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGCATCCTCACCGAGCTaGGCCACACGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPASSPS*ATRGHG
Trigger: CCCATGACCCCGTGTGGCCCAGCTCGGTGAGGATGC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTGGAGCAGGCTGACGTaGTCTGGGAGGCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPWSRLT*SGRQLA
Trigger: AGCCAGCTGCCTCCCAGACCACGTCAGCCTGCTCCA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCAATGTGACGTTGGCATaGTCGACATCCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLNVTLA*STSMGH
Trigger: GTGTCCCATGGATGTCGACCATGCCAACGTCACATT...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCAAGCAAAAGGGGTGCTaGAATGTGACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVKQKGC*NVTLAW
Trigger: CCATGCCAACGTCACATTCCAGCACCCCTTTTGCTT...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTGGCCCAAGGAGACAGTaGCACTGCCACCCTACTGGG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPGPRRQ*HCHPTG
Trigger: CCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCC...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGCGGTACAGCGATCCTaGACTTCTAGCCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSAVQRS*TSSLFS
Trigger: TGAAAAGAGGCTAGAAGTCCAGGATCGCTGTACCGC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTGGACGCTGCACTTGTaGGGGCAGGACACCACCACG +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTWTLHL*GQDTTT
Trigger: CGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCA...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTGTTGGGGTCGGGCTTaGATGCATCTCCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSCWGRA*MHLPND
Trigger: GTCATTTGGGAGATGCATTCAAGCCCGACCCCAACA...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGTGGTAAGAGCACCATaGAGCGTGGTGCATAGCAAA +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPVVRAP*SVVHSK
Trigger: TTTGCTATGCACCACGCTTCATGGTGCTCTTACCAC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPLETSQ*HALLLL
Trigger: CAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPCCPLC*VHERKT
Trigger: TGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGGGCTGACAAGGAATaGCCCCGCTGCGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFWADKE*PRCGQN
Trigger: ATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCTGCCAGAGCCCTTCTaGCACACAAATTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLLPEPF*HTNYPQ
Trigger: CTGGGGGTAATTTGTGTGTCAGAAGGGCTCTGGCAG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGTCAGCAGGGCCGCCATaGAGCTCTCGCAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVSAGPP*SSRRSG
Trigger: ACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGA...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCGTGGGCCTTGATCTaGTGGTTTGTCCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFSWALI*WFVPSL
Trigger: GAGCGAGGGGACAAACCAGCAGATCAAGGCCCACGA...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS-3UTR GCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGGTGTTCCGAGCCACTTaGCCCGCGCTCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEVFRAT*PALLST
Trigger: CGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACAC...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGTGTTCCGAGCCACTTaGCCCGCGCTCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPVFRAT*PALLST
Trigger: CGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACAC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGTGTTCCGAGCCACTTaGCCCGCGCTCTTGTCCACG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVVFRAT*PALLST
Trigger: CGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACAC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCACACATTGGTTTTaGCTAAGAAGCACCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVRTHWF*LRSTRR
Trigger: GCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGCAGGCAGTCTGACGTaGACGGCCCAGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPAGSLT*TAQLAN
Trigger: ATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCCCAGTGACACGCACTaGTGCTTCTGGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPPSDTH*CFWGPH
Trigger: GTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACTGGG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGGAGCAGCGCAAGGCTTaGCCGCCGCCGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQREQRKA*PPPGEG
Trigger: CCCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTC...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTAGGAGACAGTGGCACTaGCACCCTACTGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPRRQWH*HPTGAV
Trigger: CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCT...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTGCACCCGCCCAATCCTaGAACGGCCCAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAAPAQS*NGPRRQ
Trigger: CTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGC...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCACCCGCAAGGGGAGTCTaGACCCGCCCAATCCTGCAA +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPPARGV*TRPILQ
Trigger: TTGCAGGATTGGGCGGGTGCAGACTCCCCTTGCGGG...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCCCCGCAAGGGGAGTCTaGACCCGCCCAATCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTPARGV*TRPILQ
Trigger: TTGCAGGATTGGGCGGGTGCAGACTCCCCTTGCGGG...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCACCGCCTCACGCCGCCTaGTGGCCCGGCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAPPHAA*WPGSLM
Trigger: CATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGGCGG...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGAGGCTTCACACGTCTaGCCTGCCACCGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSREASHV*PATACG
Trigger: CCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACCTCACCCGCACACCTaGCAGCCCCGAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEPHPHT*QPRDGR
Trigger: TCGGCCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAATGAAACGCAGGCTCTaGTTGGCCACCGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPMKRRL*LATGAS
Trigger: GGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCAT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGATGAAACGCAGGCTCTaGTTGGCCACCGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRMKRRL*LATGAS
Trigger: GGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCAT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGATGAAACGCAGGCTCTaGTTGGCCACCGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEMKRRL*LATGAS
Trigger: GGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTTCAT...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCTGCACAGCACCAGGTaGCACTTCTCACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSLHSTR*HFSHLY
Trigger: GTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAG...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVCSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTSCRLS*DSSRPV
Trigger: CACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGA...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPESCRLS*DSSRPV
Trigger: CACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGA...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFCTLSI*SCRLSW
Trigger: CCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCA...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFCTLSI*SCRLSW
Trigger: CCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTTCAGGTAGACCCTaGCACACATCTTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLRSGRP*HTSYSQ
Trigger: TTGGCTATAAGATGTGTGCCAGGGTCTACCTGAACG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGGCGGCTGCCGCCGGCTaGAAAGTCCCGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRAAAAG*KVPAGL
Trigger: CAGCCCAGCCGGGACTTTCCAGCCGGCGGCAGCCGC...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGGGACCTTAACCAAGTaGCATCACTTCTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPGTLTK*HHFFGP
Trigger: AGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCATCCAGAAGCCGACGGTaGAGCCTGGCTTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPSRSRR*SLASPQ
Trigger: CTGAGGGGAAGCCAGGCTCCACCGTCGGCTTCTGGA...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGGACCAGGCCGTACTTaGACCAGGCGGCTCACTCGT +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRGPGRT*TRRLTR
Trigger: ACGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGTCAGGAGCGCCCGTTaGTCAGCCTGGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRVRSAR*SAWAGP
Trigger: GGGGCCTGCCCAGGCTGACCAACGGGCGCTCCTGAC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCAGTATGCCACACCATaGCTCCCCAGCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAQYATP*LPSATG
Trigger: GCCTGTGGCGCTGGGGAGCCATGGTGTGGCATACTG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGTCAGCCCAGCTGTTaGGATCAGTGTACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFCQPSC*DQCTPR
Trigger: CCGGGGAGTACACTGATCCCAACAGCTGGGCTGACA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGGCCCAAGGAGACAGTaGCACTGCCACCCTACTGGG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVGPRRQ*HCHPTG
Trigger: CCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAPCHRM*GTPGSG
Trigger: ACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGCCCTGCCACCGCATGTaGGGCACACCAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRPCHRM*GTPGSG
Trigger: ACCTGATCCTGGTGTGCCCCACATGCGGTGGCAGGG...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTCACCCGCCCACCCCTaGCATGGAGACCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRSPAHP*HGDRRP
Trigger: CGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGA...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCGGCATGCAGCAAGATaGCGGGATGGAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFRHAAR*RDGETH
Trigger: GTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCCGAGGCAGGCAGTCTaGCGTGCACGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVPRQAV*RARPSW
Trigger: CCAGCTGGGCCGTGCACGTCAGACTGCCTGCCTCGG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTGCTGCCCACTGTGTTaGGTACATGAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVCCPLC*VHERKT
Trigger: TGTCTTCCTCTCATGTACTCAACACAGTGGGCAGCA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCCAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCG +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLQSTAS*KAQRMS
Trigger: CGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTG...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGGGAGGGCCGGGGATTaGGCAAGGGGCCCGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQGRAGD*ARGPQG
Trigger: CCCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTGCTGGCCCGGCTCCCTaGTGCCACCGTGCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVAGPAP*CHRACD
Trigger: GTCACAGGCACGGTGGCATCAGGGAGCCGGGCCAGC...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFVQQEK*NAGSAW
Trigger: CCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCAC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKSGGLV*SAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCT...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSALHAV*FLPVLP
Trigger: CGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGCTAGGCGGATGTCGTaGACACTCAGCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSARRMS*TLSIWS
Trigger: TGACCAGATGCTGAGTGTGCACGACATCCGCCTAGC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGGGGTCGGGCTTGAATaGATCTCCCAAATGACGTCG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFGVGLE*ISQMTS
Trigger: CGACGTCATTTGGGAGATGCATTCAAGCCCGACCCC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHMEKHT*GPPSAV
Trigger: GACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCAT...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTGGCACGTGGGCCGTATaGCACCAGCTCTACGCACAA +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAGTWAV*HQLYAQ
Trigger: TTGTGCGTAGAGCTGGTGGCATACGGCCCACGTGCC...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGGCCCGGCTGCGGCTTaGACGTGGCTCAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSGPAAA*TWLSVV
Trigger: GACCACACTGAGCCACGTGCAAGCCGCAGCCGGGCC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTATCAAGCAAAAGGGGTaGTGGAATGTGACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLIKQKG*WNVTLA
Trigger: TGCCAACGTCACATTCCAGCACCCCTTTTGCTTGAT...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGGTGGAAAATGCCCTTaGAGTGAGCTGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPGGKCP*SELLAP
Trigger: CGGGGCCAGCAGCTCACTGCAAGGGCATTTTCCACC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTAATCACCGGACATCATaGCAGCTTGTGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRNHRTS*QLVCFP
Trigger: TGGAAAACACACAAGCTGGCATGATGTCCGGTGATT...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTAAGAGGCTGCGAATCTaGAGATGCTGTGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFKRLRI*RCCAAS
Trigger: CGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTT...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTTCAGGGACAAAAACTaGCGTCCCAGCACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFFRDKN*RPSTAV
Trigger: GACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPAELAS*ALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGCGGCTGCCGCCGGCTaGAAAGTCCCGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRAAAAG*KVPAGL
Trigger: CAGCCCAGCCGGGACTTTCCAGCCGGCGGCAGCCGC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGTGGCATCACTTCTTTaGGCCTCATTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRVASLL*ASFSSS
Trigger: AGATGAGGAAAATGAGGCCCAAAGAAGTGATGCCAC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGCCGACGGTGGAGCCTaGCTTCCCCTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRADGGA*LPLSRC
Trigger: GCACCTGCTGAGGGGAAGCCAGGCTCCACCGTCGGC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCCAGGCTGGCCCAGGTaGCCAGCGCCAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSPGWPR*PAPSEG
Trigger: ACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCGTCCTGCTGGGAGTCTaGTCATGTGTGGTAAACAAG +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVVLLGV*SCVVNK
Trigger: CTTGTTTACCACACATGACCAGACTCCCAGCAGGAC...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTGCACGTGGCTCAGTGTaGTCACAAGAGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAARGSV*SQEPVP
Trigger: GGGCACTGGCTCTTGTGACCACACTGAGCCACGTGC...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGCTCCCCTGTTCAACTaGCTGTTGTGGCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFAPLFN*LLWHRR
Trigger: CCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCCAGTATGCCACACCATaGCTCCCCAGCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLQYATP*LPSATG
Trigger: GCCTGTGGCGCTGGGGAGCCATGGTGTGGCATACTG...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTGCATCCTCACCGAGCTaGGCCACACGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTASSPS*ATRGHG
Trigger: CCCATGACCCCGTGTGGCCCAGCTCGGTGAGGATGC...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGCATCCTCACCGAGCTaGGCCACACGGGGTCATGGG +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTASSPS*ATRGHG
Trigger: CCCATGACCCCGTGTGGCCCAGCTCGGTGAGGATGC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCCTCACGCCGCCTGCTaGCCCGGCTCCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPPHAAC*PGSLMP
Trigger: TGGCATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGA +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSLTMLS*HAVHFG
Trigger: TCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAA...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGCGTCGAGAGGACCCCTaGTCCATCAGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRRREDP*SISMSV
Trigger: GACACTCATGCTGATGGATCAGGGGTCCTCTCGACG...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGCTGCCAGGGCCCTGTaGTGCGGGGAGGGCCGATCA +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRAARAL*CGEGRS
Trigger: TGATCGGCCCTCCCCGCATCACAGGGCCCTGGCAGC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGGACCCTGGAGCAGGCTaGCGTGGTCTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRDPGAG*RGLGGS
Trigger: GCTGCCTCCCAGACCACGTCAGCCTGCTCCAGGGTC...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGGGAGGGCCGGGGATTaGGCAAGGGGCCCGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKGRAGD*ARGPQG
Trigger: CCCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCC...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACACTATGGTCATGGGCTaGGAAGTAGATTTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHTMVMG*EVDLGD
Trigger: GTCACCCAAATCTACTTCTCAGCCCATGACCATAGT...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTAGCCTGCCGACACTaGCCTCGCCTGGCTAGGACC +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEVACRH*PRLART
Trigger: GGTCCTAGCCAGGCGAGGTCAGTGTCGGCAGGCTAC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVALRSV*SFSGGL
Trigger: TAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTALRSV*SFSGGL
Trigger: TAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGC...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACGGAGGGACTCCACGCTaGTCTTCATGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHGGTPR*SSCCLL
Trigger: AAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCC...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTGGGGTCGGGCTTGAATaGATCTCCCAAATGACGTCG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPGVGLE*ISQMTS
Trigger: CGACGTCATTTGGGAGATGCATTCAAGCCCGACCCC...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAAGTCCCGGCTGGGCTaGAACCCCGGCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQKSRLG*NPGSRT
Trigger: CGTGCGCGAGCCGGGGTTGCAGCCCAGCCGGGACTT...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGAGACCGAAGGCCGGTaGTGTCAGCAACAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPETEGR*CQQQRA
Trigger: AGCTCTCTGTTGCTGACAGCACCGGCCTTCGGTCTC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPMEKHT*GPPSAV
Trigger: GACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCAT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCTCTACGCACAACGTTaGTTTCGGAGACCGTTGACG +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFLYAQR*FRRPLT
Trigger: CGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAG...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTCTACGCACAACGTTaGTTTCGGAGACCGTTGACG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFLYAQR*FRRPLT
Trigger: CGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAG...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGCAGGCAGTCTGACGTaGACGGCCCAGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKAGSLT*TAQLAN
Trigger: ATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGC...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPVFRSF*RKSFLY
Trigger: ATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAAC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCCCGCCAGGAGCGTCTaGCTGGGAAGGGCTACTGGA +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSPARSV*LGRATG
Trigger: TCCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTTCCCTCGGCAGAGACTaGTCTGGGGAGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTSLGRD*SGEEGV
Trigger: CACCCCTTCCTCCCCAGAGCAGTCTCTGCCGAGGGA...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTAATCACCGGACATCATaGCAGCTTGTGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPNHRTS*QLVCFP
Trigger: TGGAAAACACACAAGCTGGCATGATGTCCGGTGATT...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCTGCGAATCTGCAGATaGTGTGCAGCGTCGACACTG +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPLRICR*CAASTL
Trigger: CAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCTACACTTTCATTCTaGAACAAGGAAACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVSTLSF*NKETCS
Trigger: GCTGCAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS-3UTR CCA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGTCAGGACGCACACATaGAAGTTCTTCAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLVRTHT*KFFKMA
Trigger: TGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGAC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFCSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGCACTCCATTGTAGCTaGCGGTCTCCAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRALHCS*RSPGPG
Trigger: TCCAGGTCCTGGAGACCGCCAGCTACAATGGAGTGC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGGGCCACAAAGACTaGGCAGCCAGAGGCGATATT +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFLGHKD*AARGDI
Trigger: AATATCGCCTCTGGCTGCCCAGTCTTTGTGGCCCAA...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTTTTTCTAGAACAGTTTaGGCCACAAAGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLFSRTV*ATKTGQ
Trigger: CTGCCCAGTCTTTGTGGCCCAAACTGTTCTAGAAAA...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTTTTCTAGAACAGTTTaGGCCACAAAGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPFSRTV*ATKTGQ
Trigger: CTGCCCAGTCTTTGTGGCCCAAACTGTTCTAGAAAA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCTGGAAAGTCCCGGCTaGGCTGCAACCCCGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMLESPG*AATPAR
Trigger: GCGAGCCGGGGTTGCAGCCCAGCCGGGACTTTCCAG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCGCCCACCCCTGACATaGAGACCGAAGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRRPPLT*RPKAGA
Trigger: AGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGCCGACGGTGGAGCCTaGCTTCCCCTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAADGGA*LPLSRC
Trigger: GCACCTGCTGAGGGGAAGCCAGGCTCCACCGTCGGC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAATTCCCGCCAGGGTGGTaGTCAGGAGCGCCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEFPPGW*SGAPVG
Trigger: ACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAA...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTCCAGGAGCGTCTGCCTaGGAAGGGCTACTGGAGACG +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTPGASA*EGLLET
Trigger: CGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGG...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCTCAGGTTACGTCTGTaGGACCCTCAGGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKLRLRL*DPQVGP
Trigger: GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAG...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGCCAACCAGCGTGCCTaGCAGCAGGGAGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMANQRA*QQGAAR
Trigger: TCGGGCTGCTCCCTGCTGCCAGGCACGCTGGTTGGC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPAAACT*LSVVTR
Trigger: TCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGCTGCGGCTTGCACGTaGCTCAGTGTGGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRAAACT*LSVVTR
Trigger: TCTTGTGACCACACTGAGCCACGTGCAAGCCGCAGC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACACACAAATCCCAACCTaGCCGCCTGTGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHTQIPT*PPVCHQ
Trigger: CTGGTGACACACAGGCGGCCAGGTTGGGATTTGTGT...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACAATGGGGCTGCAATGTaGGTCATAAGGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHNGAAM*VIRAPS
Trigger: AGAGGGGGCCCTTATGACCCACATTGCAGCCCCATT...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCCCGGGCTGAGGAAGTaGCCCAAGGAGCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDPGLRK*PKEQEP
Trigger: GGGCTCCTGCTCCTTGGGCCACTTCCTCAGCCCGGG...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGACACTGACCTCGCCTaGCTAGGACCCCGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRDTDLA*LGPRCA
Trigger: TGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACACTGACCTCGCCTaGCTAGGACCCCGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEDTDLA*LGPRCA
Trigger: TGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp CTGCCTGAGCAAAGGGCTCCCCTGTTCAACTGGCTGTaGTGGCATCGAAGGGACACAGGTGCTGTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LPEQRAPLFNWL*WHRRDTGAVPR
Trigger: CCGAGGGACAGCACCTGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGCCCTTTGCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGTGGCCTCGTGGGCCTTaGTCTGCTGGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTWPRGP*SAGLSP
Trigger: AGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCA...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGTTTTACTTAACATGCTaGCATGTCCAGCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: QVGPMASRQERLPGKGYWFYLTC*HVQLSP
Trigger: TGGGGATAGCTGGACATGTCAGCATGTTAAGTAAAA...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGGATGCACAGCATCCATaGGCGAGGCTCCGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRDAQHP*ARLRSE
Trigger: TTCTGAACGGAGCCTCGCTCATGGATGCTGTGCATC...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSRDSKQ*VEKMPS
Trigger: AGATGGCATTTTCTCAACTCACTGTTTACTGTCTCT...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGTGGTAAGAGCACCATaGAGCGTGGTGCATAGCAAA +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSVVRAP*SVVHSK
Trigger: TTTGCTATGCACCACGCTTCATGGTGCTCTTACCAC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCACTGTGTTGAGTACATaGGAGGAAGACACACTCAGA +
Preference number: 4 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVTVLST*EEDTLR
Trigger: TCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGT...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTAGGGGTGCTGGAATGTaGCGTTGGCATGGTCGACAT +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAARGAGM*RWHGRH
Trigger: ATGTCGACCATGCCAACGTCACATTCCAGCACCCCT...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGGCCCTCCCTTGGGCTaGCAAGGAATGACCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMGPPLG*QGMTPL
Trigger: CAGCGGGGTCATTCCTTGTCAGCCCAAGGGAGGGCC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTVQQEK*NAGSAW
Trigger: CCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCAC...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLALRSV*SFSGGL
Trigger: TAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGC...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTLSQKR*PHSVCF
Trigger: GAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAG...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTCAGCAGGGCCGCCATaGAGCTCTCGCAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSSAGPP*SSRRSG
Trigger: ACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACTCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RMWSGPYAASRGSCVPLKSRLTC*TAELAS
Trigger: CGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT...TTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVSRLTC*TAELAS
Trigger: CGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSHASAF*RFLRLT
Trigger: TGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAGACCGTTGACGGCATaGAGCAAGATGACGGGATGG +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVRPLTA*SKMTGW
Trigger: CCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTCGCACACATTGGTTTTaGCTAAGAAGCACCCGTCGC +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPRTHWF*LRSTRR
Trigger: GCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCG...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACCGCACACATTGGTTTTaGCTAAGAAGCACCCGTCGC +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHRTHWF*LRSTRR
Trigger: GCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCG...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGCAGGCAGTCTGACGTaGACGGCCCAGCTGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSAGSLT*TAQLAN
Trigger: ATTGGCCAGCTGGGCCGTGCACGTCAGACTGCCTGC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACCCCCATTTCCCGCTTaGTGCCAGGGCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEPPFPA*CQGPVM
Trigger: CATCACAGGGCCCTGGCAGCAAGCGGGAAATGGGGG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGACAGAACCACATTCATaGTTGATGGCTCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: LCLATGASSPAHLPAPRRTEPHS*LMAPRI
Trigger: AATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGT...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCCCGCAAGGGGAGTCTaGACCCGCCCAATCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSPARGV*TRPILQ
Trigger: TTGCAGGATTGGGCGGGTGCAGACTCCCCTTGCGGG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCAGTATTTTACAGCTCTaGCAGAGCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSSILQL*QSPSDT
Trigger: TGTGTCAGAAGGGCTCTGGCAGAGCTGTAAAATACT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGAGGCTTCACACGTCTaGCCTGCCACCGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDREASHV*PATACG
Trigger: CCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAAGAGGCTGCGAATCTaGAGATGCTGTGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRKRLRI*RCCAAS
Trigger: CGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKAELAS*ALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGC...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAATCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSESVTRF*RDSTLL
Trigger: GAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGA...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRSCRLS*DSSRPV
Trigger: CACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGA...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSSCRLS*DSSRPV
Trigger: CACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGGGACCTTAACCAAGTaGCATCACTTCTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFGTLTK*HHFFGP
Trigger: AGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCGCCCACCCCTGACATaGAGACCGAAGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVRPPLT*RPKAGA
Trigger: AGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGAGCAAGATGACGGGATaGAGAAACACACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPESKMTG*RNTPAG
Trigger: GCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCT...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHCPRPR*GHGEAR
Trigger: CCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTGCCCACGGCCCCGGTaGGGACACGGAGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDCPRPR*GHGEAR
Trigger: CCGAGCCTCTCCGTGTCCCCACCGGGGCCGTGGGCA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGTTCCCGCCAGGGTGGTaGTCAGGAGCGCCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRFPPGW*SGAPVG
Trigger: ACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAA...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACGTGCACGGCCCAGCTaGCCAATTGTGGGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQRARPS*PIVGAA
Trigger: AGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCAAAGCCAGGCCCCGTaGGTCCCCCACTTCCACACC +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMQSQAP*VPHFHT
Trigger: GGTGTGGAAGTGGGGGACCCACGGGGCCTGGCTTTG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAATGGGGCTGCAATGTaGGTCATAAGGGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRNGAAM*VIRAPS
Trigger: AGAGGGGGCCCTTATGACCCACATTGCAGCCCCATT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGAAGGGGTGGTGGAATaGGGCTGCAATGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPEGVVE*GCNVGH
Trigger: ATGACCCACATTGCAGCCCCATTCCACCACCCCTTC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCACCACAGCCAGTGCAGTaGGAGCCCTGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAPQPVQ*EPWQVV
Trigger: CACCACCTGCCAGGGCTCCCACTGCACTGGCTGTGG...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACATGGTCGACATCCATaGGACACGTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEHGRHP*DTWPLA
Trigger: GGCCAGGGGCCACGTGTCCCATGGATGTCGACCATG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGGTCAAATGAGAGATTaGCCTTCTTTGGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRGQMRD*PSLVFV
Trigger: AACAAAGACCAAAGAAGGCCAATCTCTCATTTGACC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCAACATGATTATTGCTaGGCAATAACTCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRQHDYC*AITHGL
Trigger: AAGACCGTGAGTTATTGCCCAGCAATAATCATGTTG...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHLTMLS*HAVHFG
Trigger: TCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAA...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCATGGACGCTGCACTTGTaGGGGCAGGACACCACCACG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAWTLHL*GQDTTT
Trigger: CGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCA...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTGGACGCTGCACTTGTaGGGGCAGGACACCACCACG +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVWTLHL*GQDTTT
Trigger: CGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTGGACGCTGCACTTGTaGGGGCAGGACACCACCACG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDWTLHL*GQDTTT
Trigger: CGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCA...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTGGCCTCGTGGGCCTTaGTCTGCTGGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSWPRGP*SAGLSP
Trigger: AGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACCTCCGTTCAGAATTGTaGAGTCGTGTCATTAACTAC +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHLRSEL*SRVINY
Trigger: GTAGTTAATGACACGACTTCACAATTCTGAACGGAG...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCATATTATACATTTTGTaGAGGGGAAGTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSILYIL*RGSCRD
Trigger: ATCCCTGCAACTTCCCCTTCACAAAATGTATAATAT...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCACAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAQSTAS*KAQRMS
Trigger: CGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTG...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACAACCACATTCATGCTTaGTGGCTCCTAGAATTGACA +
Preference number: 4 (lower is better)
Translates to: PETAEASHVCPATACGAHNHIHA*WLLELT
Trigger: TGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTT...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGCTGTGGGGCCCGGGCTaGGGAAGTGGCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQLWGPG*GSGPRS
Trigger: GCTCCTTGGGCCACTTCCTCAGCCCGGGCCCCACAG...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCAGCCTCTTTTCACGGTaGGAGTTCACAAGACAGACT +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSSLFSR*EFTRQT
Trigger: AGTCTGTCTTGTGAACTCTCACCGTGAAAAGAGGCT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCGGTCTGCTTCGGGCTaGACAGCACCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPRSASG*TAPGGT
Trigger: AGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGTCAGCAGGGCCGCCATaGAGCTCTCGCAGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRSAGPP*SSRRSG
Trigger: ACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGA...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTGCTTCCTCCCAGTTCTaGCGGAAGGGCCGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVASSQF*RKGRIS
Trigger: GGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGC...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLALHAV*FLPVLP
Trigger: CGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGC...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAATGCTCAGAGGGTTCTaGTTCGGGCTGTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEMLRGF*FGLWGC
Trigger: GCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCAT...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGCACCATGAAGCGTGGTaGATAGCAAAAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEHHEAW*IAKGVQ
Trigger: CTGCACCCCTTTTGCTATGCACCACGCTTCATGGTG...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGGGAGGGCCGATCACTaGCCAAGGGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQGRADH*PRGHWA
Trigger: GGCCCAGTGGCCCCTTGGGCAGTGATCGGCCCTCCC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGGTCACAAGAGCCAGTaGCCTTCACGTGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPGHKSQ*PSREPG
Trigger: GCCCGGCTCACGTGAAGGGCACTGGCTCTTGTGACC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGTCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTSKGHR*CPSAET
Trigger: AGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGA...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCATCAAGCAAAAGGGGTaGTGGAATGTGACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: SQPGRLCVTRARRAERPSIKQKG*WNVTLA
Trigger: TGCCAACGTCACATTCCAGCACCCCTTTTGCTTGAT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGCCCTTGCAGTGAGCTaGTGGCCCCGCCTCACGCCG +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQALAVS*WPRLTP
Trigger: CGGCGTGAGGCGGGGCCAGCAGCTCACTGCAAGGGC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTTCACACGTCTGCCCTaGCACCGCATGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSFTRLP*HRMWGT
Trigger: TGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGCTGCACAGCACCAGGTaGCACTTCTCACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRLHSTR*HFSHLY
Trigger: GTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAG...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAACSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTTGGGCCTTGATCTGCTaGTTTGTCCCCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTWALIC*FVPSLL
Trigger: GAGGAGCGAGGGGACAAACCAGCAGATCAAGGCCCA...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347662.8
CDS-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMSVTRF*RDSTLL
Trigger: GAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGA...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVSVTRF*RDSTLL
Trigger: GAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTTGGGCCACAAAGACTaGGCAGCCAGAGGCGATATT +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTLGHKD*AARGDI
Trigger: AATATCGCCTCTGGCTGCCCAGTCTTTGTGGCCCAA...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGCTCGTCCGAACACATaGGGCAGAATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVARPNT*GRIQTP
Trigger: AGGTGTTTGGATTCTGCCCCATGTGTTCGGACGAGC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACGGCTTGTGGGCGAGTaGCACAGGTGTGACAGTTCG +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSERLVGE*HRCDSS
Trigger: CGAACTGTCACACCTGTGCCACTCGCCCACAAGCCG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGATGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRCGRGL*ASGTGV
Trigger: CACACCTGTGCCACTCGCCCACAAGCCGCGCCCACA...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAAGCACCAGAGACAGGTaGGCCACCGGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRSTRDR*ATGHPP
Trigger: TGGTGGGTGCCCGGTGGCCCACCTGTCTCTGGTGCT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCACACCCAGGACAGATaGCAGCACCAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTHTQDR*QHQRQV
Trigger: CACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTG...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCACCAGGAGCGTCTGCCTaGGAAGGGCTACTGGAGACG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAPGASA*EGLLET
Trigger: CGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGG...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGCAGCTCTGTCCTGCTaGGAGTCTGGTCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTAALSC*ESGHVW
Trigger: CCACACATGACCAGACTCCCAGCAGGACAGAGCTGC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAGTATGCCACACCATaGCTCCCCAGCGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVQYATP*LPSATG
Trigger: GCCTGTGGCGCTGGGGAGCCATGGTGTGGCATACTG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCATGGAGCAGGCTGACGTaGTCTGGGAGGCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAWSRLT*SGRQLA
Trigger: AGCCAGCTGCCTCCCAGACCACGTCAGCCTGCTCCA...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCATGGTCGACATCCATaGGACACGTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRHGRHP*DTWPLA
Trigger: GGCCAGGGGCCACGTGTCCCATGGATGTCGACCATG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVSGCRM*VHHADY
Trigger: GTAGTCAGCATGGTGGACCCACATCCTACAGCCAGA...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTGTAGAGGGAGGAGTCTaGGAGGGCCGGGGATTGAGC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVVEGGV*EGRGLS
Trigger: GCTCAATCCCCGGCCCTCCCAGACTCCTCCCTCTAC...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCCTCACGCCGCCTGCTaGCCCGGCTCCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHPHAAC*PGSLMP
Trigger: TGGCATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LHECGAGHMQHRVVVVSLAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...GAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR TCA 90 bp TGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTAACATGGACGCTGCACTTGTaGGGGCAGGACACCACCACG +
Preference number: 4 (lower is better)
Translates to: WSGPYAASRGSCVPLKVTWTLHL*GQDTTT
Trigger: CGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCA...TGTTACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAACTCCTTCAGCAGGTTaGCGTGCTGCACGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRTPSAG*RAARRS
Trigger: GCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCTGTTGGGGTCGGGCTTaGATGCATCTCCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLCWGRA*MHLPND
Trigger: GTCATTTGGGAGATGCATTCAAGCCCGACCCCAACA...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGATGCACAGCATCCATaGGCGAGGCTCCGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTDAQHP*ARLRSE
Trigger: TTCTGAACGGAGCCTCGCTCATGGATGCTGTGCATC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTCACCCGCCCACCCCTaGCATGGAGACCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDSPAHP*HGDRRP
Trigger: CGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCGGCATGCAGCAAGATaGCGGGATGGAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKRHAAR*RDGETH
Trigger: GTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCG...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGTGGTAAGAGCACCATaGAGCGTGGTGCATAGCAAA +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVVVRAP*SVVHSK
Trigger: TTTGCTATGCACCACGCTTCATGGTGCTCTTACCAC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGAGTGGCACAGGTGTaGCAGTTCGCACACATTGGT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTRVAQV*QFAHIG
Trigger: ACCAATGTGTGCGAACTGTCACACCTGTGCCACTCG...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTATATTATACATTTTGTaGAGGGGAAGTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPILYIL*RGSCRD
Trigger: ATCCCTGCAACTTCCCCTTCACAAAATGTATAATAT...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCTGGAGACGTCCCAGTaGCACGCACTGCTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPLETSQ*HALLLL
Trigger: CAGAAGCAGCAGTGCGTGTCACTGGGACGTCTCCAG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACAGAGCACGGCGAGCTaGAAGGCCCAGCGTATGTCG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQQSTAS*KAQRMS
Trigger: CGACATACGCTGGGCCTTTCAGCTCGCCGTGCTCTG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTAGGGGTGCTGGAATGTaGCGTTGGCATGGTCGACAT +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTRGAGM*RWHGRH
Trigger: ATGTCGACCATGCCAACGTCACATTCCAGCACCCCT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGATGCCACCGTGCCTGTaGCCATCAGCATCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMMPPCL*PSASAW
Trigger: CCAGGCTGATGCTGATGGTCACAGGCACGGTGGCAT...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACAGCCTCTTTTCACGGTaGGAGTTCACAAGACAGACT +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHSLFSR*EFTRQT
Trigger: AGTCTGTCTTGTGAACTCTCACCGTGAAAAGAGGCT...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCAGGTGCTGGGGGCATTaGCACACTCTGACAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LHECGAGHMQHRVVVVSLRCWGH*HTLTSV
Trigger: CACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCT...GAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAATGCCCACACTCGGTCTaGTTCGGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQCPHSV*FGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCA...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPLSQKR*PHSVCF
Trigger: GAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCTCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTATTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: MWSGPYAASRGSCVPLKVFSRLT*CTAELA
Trigger: GGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAA...TACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGTCTTTTCGAGCGAGTTaGTCCACTCCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVSFRAS*STPSAG
Trigger: ACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTALHAV*FLPVLP
Trigger: CGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCTCAGCATCTGGTCATaGCGGCTCAGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVLSIWS*RLSWDS
Trigger: GGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCTCAGCATCTGGTCATaGCGGCTCAGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMLSIWS*RLSWDS
Trigger: GGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTATGAGTGTCACTTTCTaGTTAAACGGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFMSVTF*LNGQGS
Trigger: GCTTCCTTGGCCGTTTAAGCAGAAAGTGACACTCAT...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCAGTGAGTTGAGAAAATaGCATCTGGGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTSELRK*HLGRHR
Trigger: CCTGTGCCTGCCCAGATGGCATTTTCTCAACTCACT...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCCCAAGCACACAGTGTaGGCCCCCATTTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDPKHTV*APISRL
Trigger: CAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGG...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAAGAGGCAGGAGAAGCTaGCTGAGCAAAGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESARGRRS*LSKGLP
Trigger: GGGGAGCCCTTTGCTCAGGCAGCTTCTCCTGCCTCT...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACTGTCCCAGGGGCTGTaGCTAGAACTGCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSELSQGL*LELHPH
Trigger: GTGAGGATGCAGTTCTAGGCACAGCCCCTGGGACAG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACGGCCAATCCTCCCCGTaGAGGGGAGAAAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDGQSSP*RGERRC
Trigger: ACACCTCCTTTCTCCCCTGCACGGGGAGGATTGGCC...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGCACCCGCCCAATCCTaGAACGGCCCAAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQAPAQS*NGPRRQ
Trigger: CTGTCTCCTTGGGCCGTTGCAGGATTGGGCGGGTGC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGGTGGAAAATGCCCTTaGAGTGAGCTGCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPGGKCP*SELLAP
Trigger: CGGGGCCAGCAGCTCACTGCAAGGGCATTTTCCACC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTTCAGGGACAAAAACTaGCGTCCCAGCACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKFRDKN*RPSTAV
Trigger: GACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAA...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGTCAGGACGCACACATaGAAGTTCTTCAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFVRTHT*KFFKMA
Trigger: TGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGAC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRHAFST*SRRSFL
Trigger: GAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAAELAS*ALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGCGGTCTCCAGGACCTaGAAGCGCAGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQAVSRT*KRRSMS
Trigger: CGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCTTCAGAGTGAAGTGTaGCTAGTCTATTATAAAACG +
Preference number: 4 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLLQSEV*LVYYKT
Trigger: CGTTTTATAATAGACTAGCCACACTTCACTCTGAAG...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGCCCGTTGGTCAGCCTaGGCAGGCCCCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKARWSA*AGPRAA
Trigger: CGCTGCTCGGGGGCCTGCCCAGGCTGACCAACGGGC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCTTCTAATCACAGTTaGACACTGAGAGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSASNHS*TLRDSK
Trigger: TTTACTGTCTCTCAGTGTCCAACTGTGATTAGAAGC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCGAGCACCATGAAGCGTaGTGCATAGCAAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLEHHEA*CIAKGV
Trigger: CACCCCTTTTGCTATGCACCACGCTTCATGGTGCTC...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACGTGCACGGCCCAGCTaGCCAATTGTGGGCGCGGCT +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSRARPS*PIVGAA
Trigger: AGCCGCGCCCACAATTGGCCAGCTGGGCCGTGCACG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCACACCCAGGACAGATaGCAGCACCAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRHTQDR*QHQRQV
Trigger: CACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGCCTGTTGTTAACCCCTaGCCTCAGGAAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEPVVNP*PQENYL
Trigger: CAGGTAGTTTTCCTGAGGCCAGGGGTTAACAACAGG...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRPGKGY*RRPSDT
Trigger: CGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTGCCCAGGCCGAGGGTaGAGCAGCGCAAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDCPGRG*SSARLA
Trigger: GGCAAGCCTTGCGCTGCTCCACCCTCGGCCTGGGCA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACGCCAACCAGCGTGCCTaGCAGCAGGGAGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHANQRA*QQGAAR
Trigger: TCGGGCTGCTCCCTGCTGCCAGGCACGCTGGTTGGC...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp CACGTGGGCCGTATGCCACCAGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGACGGCATGCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: HVGRMPPALRTT*LSETVDGMQQD
Trigger: ATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTGGCATACGGCCCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFLTMLS*HAVHFG
Trigger: TCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAA...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEAIIGT*LLQWLH
Trigger: ATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAATGGCCTCGTGGGCCTTaGTCTGCTGGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQWPRGP*SAGLSP
Trigger: AGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCA...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCTGTGGGGCCCGGGCTaGGGAAGTGGCCCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKLWGPG*GSGPRS
Trigger: GCTCCTTGGGCCACTTCCTCAGCCCGGGCCCCACAG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTGGGCTGACAAGGAATaGCCCCGCTGCGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVWADKE*PRCGQN
Trigger: ATTCTGTCCGCAGCGGGGTCATTCCTTGTCAGCCCA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGACTATGGTCATGGGCTaGGAAGTAGATTTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVTMVMG*EVDLGD
Trigger: GTCACCCAAATCTACTTCTCAGCCCATGACCATAGT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAATGCCACCGTGCCTGTaGCCATCAGCATCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRMPPCL*PSASAW
Trigger: CCAGGCTGATGCTGATGGTCACAGGCACGGTGGCAT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAGCCTCTTTTCACGGTaGGAGTTCACAAGACAGACT +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRSLFSR*EFTRQT
Trigger: AGTCTGTCTTGTGAACTCTCACCGTGAAAAGAGGCT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMALRSV*SFSGGL
Trigger: TAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCTGGCGTCCCAGCACTaGGGTCAGTGTGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVLASQH*GQCAAL
Trigger: TAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCTGGCGTCCCAGCACTaGGGTCAGTGTGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMLASQH*GQCAAL
Trigger: TAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRLSQKR*PHSVCF
Trigger: GAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAG...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAGESGR*TCEGRT
Trigger: TGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDSRLTC*TAELAS
Trigger: CGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCTCCTTCAGTTTCTCTaGTTGGCTGTCTATCACTCG +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAALLQFL*LAVYHS
Trigger: CGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGAGGGACTCCACGCTaGTCTTCATGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEGGTPR*SSCCLL
Trigger: AAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACTCAGCATCTGGTCATaGCGGCTCAGCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQLSIWS*RLSWDS
Trigger: GGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGCTAGGCGGATGTCGTaGACACTCAGCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRARRMS*TLSIWS
Trigger: TGACCAGATGCTGAGTGTGCACGACATCCGCCTAGC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACAAAACGTGTCAGGTGTaGTCACGCGTGGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDKTCQV*SRVAPP
Trigger: GGGAGGAGCCACGCGTGAGCACACCTGACACGTTTT...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQLLFHT*LPQGGT
Trigger: GGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCAGTGAGTTGAGAAAATaGCATCTGGGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLSELRK*HLGRHR
Trigger: CCTGTGCCTGCCCAGATGGCATTTTCTCAACTCACT...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCACCATGAAGCGTGGTaGATAGCAAAAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKHHEAW*IAKGVQ
Trigger: CTGCACCCCTTTTGCTATGCACCACGCTTCATGGTG...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQSDTHC*FWGPHQ
Trigger: CTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACT...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCAGGGAACACACATCTaGAAGTCCAGGCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDQGTHI*KSRPSP
Trigger: GGGCGAAGGCCTGGACTTGCAGATGTGTGTTCCCTG...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGCAGGGAACACACATCTaGAAGTCCAGGCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMQGTHI*KSRPSP
Trigger: GGGCGAAGGCCTGGACTTGCAGATGTGTGTTCCCTG...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCTGTCCCAGGGGCTGTaGCTAGAACTGCATCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPLSQGL*LELHPH
Trigger: GTGAGGATGCAGTTCTAGGCACAGCCCCTGGGACAG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGCCCTTGCAGTGAGCTaGTGGCCCCGCCTCACGCCG +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKALAVS*WPRLTP
Trigger: CGGCGTGAGGCGGGGCCAGCAGCTCACTGCAAGGGC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCCTCACCCGCACACCTaGCAGCCCCGAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKPHPHT*QPRDGR
Trigger: TCGGCCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCGGCAGAGAAGAGGCTaGGAATCTGCAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSRQRRG*ESADAV
Trigger: CACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPHAFST*SRRSFL
Trigger: GAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTCACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: RKPARMWSGPYAASRGSCHAFST*SRRSFL
Trigger: GAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTG...ACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CCA 90 bp CATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: HSATRKPARMWSGPYAASAELAS*ALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGC...CGATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPCTLSI*SCRLSW
Trigger: CCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCA...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGCGGTCTCCAGGACCTaGAAGCGCAGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKAVSRT*KRRSMS
Trigger: CGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGC...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCGTTCAGGTAGACCCTaGCACACATCTTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPRSGRP*HTSYSQ
Trigger: TTGGCTATAAGATGTGTGCCAGGGTCTACCTGAACG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTCGTTCAGGTAGACCCTaGCACACATCTTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAARSGRP*HTSYSQ
Trigger: TTGGCTATAAGATGTGTGCCAGGGTCTACCTGAACG...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTTGGGCCACAAAGACTaGGCAGCCAGAGGCGATATT +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKLGHKD*AARGDI
Trigger: AATATCGCCTCTGGCTGCCCAGTCTTTGTGGCCCAA...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGCTCGTCCGAACACATaGGGCAGAATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTARPNT*GRIQTP
Trigger: AGGTGTTTGGATTCTGCCCCATGTGTTCGGACGAGC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACGCCCACCCCTGACATaGAGACCGAAGGCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSRPPLT*RPKAGA
Trigger: AGCACCGGCCTTCGGTCTCCATGTCAGGGGTGGGCG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCAGAAGCCGACGGTaGAGCCTGGCTTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKSRSRR*SLASPQ
Trigger: CTGAGGGGAAGCCAGGCTCCACCGTCGGCTTCTGGA...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACAGGCGGCTCACTCGTaGGGCCTAGAGATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEQAAHS*GLEIWN
Trigger: ATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCACACCCAGGACAGATaGCAGCACCAGAGACAGGTG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDHTQDR*QHQRQV
Trigger: CACCTGTCTCTGGTGCTGCCATCTGTCCTGGGTGTG...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTGTGGGACCCTCAGGTaGGCCCCATGGCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVCGTLR*APWRPA
Trigger: GGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGACCATGGCCCCAGGCTaGCCCAGGTGGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKTMAPG*PRWPAP
Trigger: TGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGT...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGCACGTGGCTCAGTGTaGTCACAAGAGCCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQARGSV*SQEPVP
Trigger: GGGCACTGGCTCTTGTGACCACACTGAGCCACGTGC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGCTCCCCTGTTCAACTaGCTGTTGTGGCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRAPLFN*LLWHRR
Trigger: CCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGACACTGACCTCGCCTaGCTAGGACCCCGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQDTDLA*LGPRCA
Trigger: TGCGCACCGGGGTCCTAGCCAGGCGAGGTCAGTGTC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp CTTGGACCAGGCGGCTCACTCGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAGCAGCGGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGPGGSLVGPRD*ESVVIKQRRLQ
Trigger: CTGGAGCCTCCGCTGCTTAATTACCACAGATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTGGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp GTGGGCGAGTGGCACAGGTGTGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCACCCGTCGCGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VGEWHRCDSSHT*VLPKKHPSRVA
Trigger: TGCTACACGCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTCGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCAACTCCTTCAGCAGGTTaGCGTGCTGCACGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FHSATRKPARMWSGPYAATPSAG*RAARRS
Trigger: GCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGT...TGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR TCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAACTCCTTCAGCAGGTTaGCGTGCTGCACGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSTPSAG*RAARRS
Trigger: GCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTTTTACTTAACATGCTaGCATGTCCAGCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: RQIRTTERFDRERARRAPFYLTC*HVQLSP
Trigger: TGGGGATAGCTGGACATGTCAGCATGTTAAGTAAAA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp ATGACGGGATGGAGAAACACACCTGCGGGCCTCCCTCAGCAGTCACCCGCCCACCTCCGTTCAGAATTGTaGAGTCGTGTCATTAACTAC +
Preference number: 4 (lower is better)
Translates to: MTGWRNTPAGLPQQSPAHLRSEL*SRVINY
Trigger: GTAGTTAATGACACGACTTCACAATTCTGAACGGAG...GTGGGCGGGTGACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCATCCCGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGTCACCCGCCCACCCCTaGCATGGAGACCGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKSPAHP*HGDRRP
Trigger: CGGCCTTCGGTCTCCATGTCAGGGGTGGGCGGGTGA...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCGGCATGCAGCAAGATaGCGGGATGGAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRRHAAR*RDGETH
Trigger: GTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGAAGTCCTTCCTTTATaGGCAGGGACACACGACTCC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDREVLPL*AGTHDS
Trigger: GGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCACTGTGTTGAGTACATaGGAGGAAGACACACTCAGA +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPTVLST*EEDTLR
Trigger: TCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGGGGTGCTGGAATGTaGCGTTGGCATGGTCGACAT +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRRGAGM*RWHGRH
Trigger: ATGTCGACCATGCCAACGTCACATTCCAGCACCCCT...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCACTGCCAGAGCCCTTCTaGCACACAAATTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESALPEPF*HTNYPQ
Trigger: CTGGGGGTAATTTGTGTGTCAGAAGGGCTCTGGCAG...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCAAAGACAGGGTCAAATaGGAGATTGGCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPKDRVK*EIGLLW
Trigger: CCAAAGAAGGCCAATCTCTCATTTGACCCTGTCTTT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAAGGTGCTGGGGGCATTaGCACACTCTGACAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESARCWGH*HTLTSV
Trigger: CACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCT...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCATGCCCACACTCGGTCTaGTTCGGGCTGCACAGCACC +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSCPHSV*FGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCA...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTAACAGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: WSGPYAASRGSCVPLKVTGESGR*TCEGRT
Trigger: TGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCC...TGTTACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGTCTTTTCGAGCGAGTTaGTCCACTCCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTSFRAS*STPSAG
Trigger: ACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTTCTTTTCGAGCGAGTTaGTCCACTCCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PARMWSGPYAASRGSCVPSFRAS*STPSAG
Trigger: ACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA...AGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPALHAV*FLPVLP
Trigger: CGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGCTAGGCGGATGTCGTaGACACTCAGCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPARRMS*TLSIWS
Trigger: TGACCAGATGCTGAGTGTGCACGACATCCGCCTAGC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACGCTAGGCGGATGTCGTaGACACTCAGCATCTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDARRMS*TLSIWS
Trigger: TGACCAGATGCTGAGTGTGCACGACATCCGCCTAGC...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCATGAGTGTCACTTTCTaGTTAAACGGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTMSVTF*LNGQGS
Trigger: GCTTCCTTGGCCGTTTAAGCAGAAAGTGACACTCAT...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGATGAGTGTCACTTTCTaGTTAAACGGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRMSVTF*LNGQGS
Trigger: GCTTCCTTGGCCGTTTAAGCAGAAAGTGACACTCAT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACGGGGTCGGGCTTGAATaGATCTCCCAAATGACGTCG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDGVGLE*ISQMTS
Trigger: CGACGTCATTTGGGAGATGCATTCAAGCCCGACCCC...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGGGGGTCGGGCTTGAATaGATCTCCCAAATGACGTCG +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMGVGLE*ISQMTS
Trigger: CGACGTCATTTGGGAGATGCATTCAAGCCCGACCCC...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAGCGGTCTCTGGAATaGTCAGAGGGTTCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVQRSLE*SEGSAS
Trigger: CGAAGCAGAACCCTCTGAGCATTCCAGAGACCGCTG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCACCATGAAGCGTGGTaGATAGCAAAAGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRHHEAW*IAKGVQ
Trigger: CTGCACCCCTTTTGCTATGCACCACGCTTCATGGTG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPVFRSF*RKSFLY
Trigger: ATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAAC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACCCCCATTTCCCGCTTaGTGCCAGGGCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSPPFPA*CQGPVM
Trigger: CATCACAGGGCCCTGGCAGCAAGCGGGAAATGGGGG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGGCCCGGCTGCGGCTTaGACGTGGCTCAGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVGPAAA*TWLSVV
Trigger: GACCACACTGAGCCACGTGCAAGCCGCAGCCGGGCC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGGGTCCGGCGAGGCTTaGGCTCAGGAGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDGSGEA*AQETEP
Trigger: TGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACAGGGAACACACATCTaGAAGTCCAGGCCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQQGTHI*KSRPSP
Trigger: GGGCGAAGGCCTGGACTTGCAGATGTGTGTTCCCTG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGGTGGTGGAATGGGGCTaGAATGTGGGTCATAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRVVEWG*NVGHKG
Trigger: GCCCTTATGACCCACATTGCAGCCCCATTCCACCAC...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGAGGCTTCACACGTCTaGCCTGCCACCGCATGTGGG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDEASHV*PATACG
Trigger: CCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCTGCGAATCTGCAGATaGTGTGCAGCGTCGACACTG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRLRICR*CAASTL
Trigger: CAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCTTCAGGGACAAAAACTaGCGTCCCAGCACTGCGGTC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPFRDKN*RPSTAV
Trigger: GACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAA...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSCSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTTTTTCTAGAACAGTTTaGGCCACAAAGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAAFSRTV*ATKTGQ
Trigger: CTGCCCAGTCTTTGTGGCCCAAACTGTTCTAGAAAA...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGCCGACGGTGGAGCCTaGCTTCCCCTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNADGGA*LPLSRC
Trigger: GCACCTGCTGAGGGGAAGCCAGGCTCCACCGTCGGC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCATCCAGAAGCCGACGGTaGAGCCTGGCTTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSSRSRR*SLASPQ
Trigger: CTGAGGGGAAGCCAGGCTCCACCGTCGGCTTCTGGA...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAGGCGGCTCACTCGTaGGGCCTAGAGATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVQAAHS*GLEIWN
Trigger: ATTCCAAATCTCTAGGCCCCACGAGTGAGCCGCCTG...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSLPPSG*DQAVLG
Trigger: TCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGAGCACCATGAAGCGTaGTGCATAGCAAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSEHHEA*CIAKGV
Trigger: CACCCCTTTTGCTATGCACCACGCTTCATGGTGCTC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACACTTCCAGCAGGCACTaGGGCGAAGGCACACCCAGG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDTSSRH*GEGTPR
Trigger: CCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGT...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAACCTGGGAAGGGCTACTaGAGACGTCCCAGTGACACG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKPGKGY*RRPSDT
Trigger: CGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGG...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACCAGGAGCGTCTGCCTaGGAAGGGCTACTGGAGACG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSPGASA*EGLLET
Trigger: CGTCTCCAGTAGCCCTTCCCAGGCAGACGCTCCTGG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGCAGCTCTGTCCTGCTaGGAGTCTGGTCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRAALSC*ESGHVW
Trigger: CCACACATGACCAGACTCCCAGCAGGACAGAGCTGC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGCCAACCAGCGTGCCTaGCAGCAGGGAGCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVANQRA*QQGAAR
Trigger: TCGGGCTGCTCCCTGCTGCCAGGCACGCTGGTTGGC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGAAGGGGTGGTGGAATaGGGCTGCAATGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPEGVVE*GCNVGH
Trigger: ATGACCCACATTGCAGCCCCATTCCACCACCCCTTC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCTTGCAGTGAGCTGCTaGCCCCGCCTCACGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKLAVSC*PRLTPP
Trigger: AGGCGGCGTGAGGCGGGGCCAGCAGCTCACTGCAAG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp CACCAGCTCTACGCACAACGTTGCTTTCGGAGACCGTaGACGGCATGCAGCAAGATGACGGGATGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: HQLYAQRCFRRP*TACSKMTGWRN
Trigger: GTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp GAGTGGCACAGGTGTGACAGTTCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATC +
Preference number: 4 (lower is better)
Translates to: EWHRCDSSHTLV*PKKHPSRVAPI
Trigger: GATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTCACACCTGTGCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATTGGCCTCGTGGGCCTTaGTCTGCTGGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FILQQGNLHECGAGHMQHWPRGP*SAGLSP
Trigger: AGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCA...ATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGCGCGAGGACCTCAGTaGAGACAGACCGGTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRARGPQ*RQTGSN
Trigger: ATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGGGCTGTGCACAGGGTaGCGGTCCTCAGGCCAATCC +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKGLCTG*RSSGQS
Trigger: GGATTGGCCTGAGGACCGTCACCCTGTGCACAGCCC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGAGAAGTAGATTTGGGTaGCAGACCCTCATTCACCTC +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTRSRFG*QTLIHL
Trigger: GAGGTGAATGAGGGTCTGTCACCCAAATCTACTTCT...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGACTATGGTCATGGGCTaGGAAGTAGATTTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTTMVMG*EVDLGD
Trigger: GTCACCCAAATCTACTTCTCAGCCCATGACCATAGT...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGTGCAGCAGGAGAAATaGAACGCAGGCTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRVQQEK*NAGSAW
Trigger: CCAAGCAGAGCCTGCGTTTCATTTCTCCTGCTGCAC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAACTGGCGTCCCAGCACTaGGGTCAGTGTGCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKLASQH*GQCAAL
Trigger: TAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAG...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTTGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: PARMWSGPYAASRGSCVPCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...AGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPDSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: TRKPARMWSGPYAASRGSSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...ACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCGTGGGCCTTGATCTaGTGGTTTGTCCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKSWALI*WFVPSL
Trigger: GAGCGAGGGGACAAACCAGCAGATCAAGGCCCACGA...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS-3UTR GCA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCTACACTTTCATTCTaGAACAAGGAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLSTLSF*NKETFF
Trigger: AAAGAAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGCTCCTTCAGTTTCTCTaGTTGGCTGTCTATCACTCG +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKLLQFL*LAVYHS
Trigger: CGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAG...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTCTCCTTCAGTTTCTCTaGTTGGCTGTCTATCACTCG +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTLLQFL*LAVYHS
Trigger: CGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAG...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRALHAV*FLPVLP
Trigger: CGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAGGCACGTGGGCCGTATaGCACCAGCTCTACGCACAA +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSGTWAV*HQLYAQ
Trigger: TTGTGCGTAGAGCTGGTGGCATACGGCCCACGTGCC...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACCTTCTGTTCCACACCTaGCTCCCTCAGGGTGGGACC +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDLLFHT*LPQGGT
Trigger: GGTCCCACCCTGAGGGAGGCAGGTGTGGAACAGAAG...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACATGCTCAGAGGGTTCTaGTTCGGGCTGTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHMLRGF*FGLWGC
Trigger: GCACCCCCACAGCCCGAAGCAGAACCCTCTGAGCAT...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQSDTHC*FWGPHQ
Trigger: CTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACT...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCAGTATTTTACAGCTCTaGCAGAGCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLSILQL*QSPSDT
Trigger: TGTGTCAGAAGGGCTCTGGCAGAGCTGTAAAATACT...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTAGAGCTACTGAGATTTaGAAACGGAAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFRATEI*KRKTEL
Trigger: TAGTTCTGTTTTCCGTTTGCAAATCTCAGTAGCTCT...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTTCACACGTCTGCCCTaGCACCGCATGTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHFTRLP*HRMWGT
Trigger: TGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAAATCTGCAGATGCTGTaGAGCGTCGACACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRNLQML*SVDTAL
Trigger: GAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTGCAACAAGGAAACCTaGAGCGCGATCATCGGAACC +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDCNKET*SAIIGT
Trigger: GGTTCCGATGATCGCGCTGCAGGTTTCCTTGTTGCA...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS-3UTR CCA 90 bp AGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: RKPARMWSGPYAASRGSCCSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...ACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTGCTCGTCCGAACACATaGGGCAGAATCCAAACACCT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVARPNT*GRIQTP
Trigger: AGGTGTTTGGATTCTGCCCCATGTGTTCGGACGAGC...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSENANPG*RSSMSH
Trigger: ATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATT...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATGTGGGACCCTCAGGTaGGCCCCATGGCGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTCGTLR*APWRPA
Trigger: GGCGGGACGCCATGGGGCCCACCTGAGGGTCCCACA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGTCCTGCTGGGAGTCTaGTCATGTGTGGTAAACAAG +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSVLLGV*SCVVNK
Trigger: CTTGTTTACCACACATGACCAGACTCCCAGCAGGAC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGCAGCTCTGTCCTGCTaGGAGTCTGGTCATGTGTGG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKAALSC*ESGHVW
Trigger: CCACACATGACCAGACTCCCAGCAGGACAGAGCTGC...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGCTCCCCTGTTCAACTaGCTGTTGTGGCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQAPLFN*LLWHRR
Trigger: CCTTCGATGCCACAACAGCCAGTTGAACAGGGGAGC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACAGAAGGGCACGGGGATaGGGCAGGGAAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHRRARG*GREGER
Trigger: CCTTTCTCCTTCCCTGCCCCATCCCCGTGCCCTTCT...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCCACAGCCAGTGCAGTaGGAGCCCTGGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKPQPVQ*EPWQVV
Trigger: CACCACCTGCCAGGGCTCCCACTGCACTGGCTGTGG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPSGCRM*VHHADY
Trigger: GTAGTCAGCATGGTGGACCCACATCCTACAGCCAGA...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGCGGTACAGCGATCCTaGACTTCTAGCCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSAVQRS*TSSLFS
Trigger: TGAAAAGAGGCTAGAAGTCCAGGATCGCTGTACCGC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGCGTCGAGAGGACCCCTaGTCCATCAGCATGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQRREDP*SISMSV
Trigger: GACACTCATGCTGATGGATCAGGGGTCCTCTCGACG...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGACCCTGGAGCAGGCTaGCGTGGTCTGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTDPGAG*RGLGGS
Trigger: GCTGCCTCCCAGACCACGTCAGCCTGCTCCAGGGTC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAGAAAACAGAGCTACTaGGATTTGCAAACGGAAAAC +
Preference number: 4 (lower is better)
Translates to: ACTWLSVVTRASALHVSRRKQSY*DLQTEN
Trigger: GTTTTCCGTTTGCAAATCTCAGTAGCTCTGTTTTCT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAGAAAACAGAGCTACTaGGATTTGCAAACGGAAAAC +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVRKQSY*DLQTEN
Trigger: GTTTTCCGTTTGCAAATCTCAGTAGCTCTGTTTTCT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCACTCACAGTAACAACATaGTTATTGCTGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPLTVTT*LLLGNN
Trigger: GTTATTGCCCAGCAATAATCATGTTGTTACTGTGAG...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCGGTCTGCTTCGGGCTaGACAGCACCAGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVRSASG*TAPGGT
Trigger: AGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRSEPDS*SGCMWL
Trigger: AAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGA...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNFSRLT*CTAELA
Trigger: GGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAA...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCTCCTTCAGTTTCTCTaGTTGGCTGTCTATCACTCG +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRLLQFL*LAVYHS
Trigger: CGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGGAGGGACTCCACGCTaGTCTTCATGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKGGTPR*SSCCLL
Trigger: AAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCC...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVIPQRS*LLLNPP
Trigger: AGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGAT...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAATGGAGAAACACACCTaGGGGCCTCCCTCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSMEKHT*GPPSAV
Trigger: GACTGCTGAGGGAGGCCCGCAGGTGTGTTTCTCCAT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGAGTGAGTTGAGAAAATaGCATCTGGGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMSELRK*HLGRHR
Trigger: CCTGTGCCTGCCCAGATGGCATTTTCTCAACTCACT...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGACAGAACCACATTCATaGTTGATGGCTCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: HTPTSSSAGSAGQALEPETEPHS*LMAPRI
Trigger: AATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGT...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGGGTCCGGCGAGGCTTaGGCTCAGGAGACAGAACCA +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKGSGEA*AQETEP
Trigger: TGGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACTCCCTCGGCAGAGACTaGTCTGGGGAGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNSLGRD*SGEEGV
Trigger: CACCCCTTCCTCCCCAGAGCAGTCTCTGCCGAGGGA...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTCGAAGGGACACAGGTaGTGTCCCTCGGCAGAGACT +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDSKGHR*CPSAET
Trigger: AGTCTCTGCCGAGGGACAGCACCTGTGTCCCTTCGA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGTCAGGACGCACACATaGAAGTTCTTCAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKVRTHT*KFFKMA
Trigger: TGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGAC...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHHAFST*SRRSFL
Trigger: GAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGATGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRCSGCM*LPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCA...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNSCRLS*DSSRPV
Trigger: CACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGA...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAATTGGGCCACAAAGACTaGGCAGCCAGAGGCGATATT +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQLGHKD*AARGDI
Trigger: AATATCGCCTCTGGCTGCCCAGTCTTTGTGGCCCAA...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPNANPG*RSSMSH
Trigger: ATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATT...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGAATGCAAACCCAGGGTaGAGAAGCAGCATGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMNANPG*RSSMSH
Trigger: ATGGGACATGCTGCTTCTCCACCCTGGGTTTGCATT...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCTTCTGCTTCGGGCTGTaGGGGTGCCCACGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCFCFGL*GCPRPR
Trigger: CCGGGGCCGTGGGCACCCCCACAGCCCGAAGCAGAA...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACACTTCCAGCAGGCACTaGGGCGAAGGCACACCCAGG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNTSSRH*GEGTPR
Trigger: CCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCACTTCCAGCAGGCACTaGGGCGAAGGCACACCCAGG +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVTSSRH*GEGTPR
Trigger: CCTGGGTGTGCCTTCGCCCCAGTGCCTGCTGGAAGT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGGGACAGGCCTCAGGTaGGGGACACCTTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNGTGLR*GTPSRE
Trigger: TTCCCTCGAAGGTGTCCCCCACCTGAGGCCTGTCCC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACCTCAGGTTACGTCTGTaGGACCCTCAGGTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNLRLRL*DPQVGP
Trigger: GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAG...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACCAGGCTGGCCCAGGTaGCCAGCGCCAAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTPGWPR*PAPSEG
Trigger: ACCCTCACTTGGCGCTGGCCACCTGGGCCAGCCTGG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCACCATGGCCCCAGGCTaGCCCAGGTGGCCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCTMAPG*PRWPAP
Trigger: TGGCGCTGGCCACCTGGGCCAGCCTGGGGCCATGGT...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCATGTCAGCCCAGCTGTTaGGATCAGTGTACTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSCQPSC*DQCTPR
Trigger: CCGGGGAGTACACTGATCCCAACAGCTGGGCTGACA...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCCCTCACGCCGCCTGCTaGCCCGGCTCCCTGATGCCA +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCPHAAC*PGSLMP
Trigger: TGGCATCAGGGAGCCGGGCCAGCAGGCGGCGTGAGG...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGGGTCAAATGAGAGATTaGCCTTCTTTGGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVGQMRD*PSLVFV
Trigger: AACAAAGACCAAAGAAGGCCAATCTCTCATTTGACC...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGGTCACAAAATCACTTaGACTGTCAAGATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPGHKIT*TVKMCL
Trigger: AAGACACATCTTGACAGTCCAAGTGATTTTGTGACC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCAGGACCCAAATCACTaGTCACAAAATCACTTGGAC +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTQDPNH*SQNHLD
Trigger: GTCCAAGTGATTTTGTGACCAGTGATTTGGGTCCTG...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTAACAAAACCTGCACGAATGTaGAGCGGGCCATATGCAGCA +
Preference number: 4 (lower is better)
Translates to: WSGPYAASRGSCVPLKVTKPARM*SGPYAA
Trigger: TGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTT...TGTTACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
3UTR CAA 72 bp CTCGCCTGGCTAGGACCCCGGTGCGCACATTCTACTTaGGAGAAAACAGAGCTACTGAGATTTGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: LAWLGPRCAHST*EKTELLRFANG
Trigger: TCCGTTTGCAAATCTCAGTAGCTCTGTTTTCTCCAAAGTAGAATGTGCGCACCGGGGTCCTAGCCAGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTGGCCTCGTGGGCCTTaGTCTGCTGGTTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVWPRGP*SAGLSP
Trigger: AGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTTTTACTTAACATGCTaGCATGTCCAGCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: AASSVSQGPFLSARTSVKFYLTC*HVQLSP
Trigger: TGGGGATAGCTGGACATGTCAGCATGTTAAGTAAAA...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCGAGTGGCACAGGTGTaGCAGTTCGCACACATTGGT +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHRVAQV*QFAHIG
Trigger: ACCAATGTGTGCGAACTGTCACACCTGTGCCACTCG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGCGAGTGGCACAGGTGTaGCAGTTCGCACACATTGGT +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQRVAQV*QFAHIG
Trigger: ACCAATGTGTGCGAACTGTCACACCTGTGCCACTCG...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGTTTCTGTAAAGTACTaGGCAGCTCTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQVSVKY*AALSCW
Trigger: CCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAAC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGTTTTGTTACGAAGGTaGCGGGGAAGCAGACCGGCT +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQVLLRR*RGSRPA
Trigger: AGCCGGTCTGCTTCCCCGTCACCTTCGTAACAAAAC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGGGCTGTGCACAGGGTaGCGGTCCTCAGGCCAATCC +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTGLCTG*RSSGQS
Trigger: GGATTGGCCTGAGGACCGTCACCCTGTGCACAGCCC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTAGAAGTAGATTTGGGTaGCAGACCCTCATTCACCTC +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVRSRFG*QTLIHL
Trigger: GAGGTGAATGAGGGTCTGTCACCCAAATCTACTTCT...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKDSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCTCCTTCAGTTTCTCTaGTTGGCTGTCTATCACTCG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRLLQFL*LAVYHS
Trigger: CGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAGGAGGGACTCCACGCTaGTCTTCATGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSGGTPR*SSCCLL
Trigger: AAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCC...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACTCAGGGCACAGGGGTaGGACGGAGGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTLRAQG*DGGHFQ
Trigger: CTGGAAGTGCCCTCCGTCGCACCCCTGTGCCCTGAG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACAGTGACACGCACTGCTaGTTCTGGGGGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNSDTHC*FWGPHQ
Trigger: CTGGTGTGGCCCCCAGAAGCAGCAGTGCGTGTCACT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACCCCAAGCACACAGTGTaGGCCCCCATTTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNPKHTV*APISRL
Trigger: CAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGG...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAGTGGTGGAATGGGGCTaGAATGTGGGTCATAAGGGC +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSVVEWG*NVGHKG
Trigger: GCCCTTATGACCCACATTGCAGCCCCATTCCACCAC...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCATCAAGCAAAAGGGGTaGTGGAATGTGACGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPIKQKG*WNVTLA
Trigger: TGCCAACGTCACATTCCAGCACCCCTTTTGCTTGAT...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAAGAGCTACTGAGATTTaGAAACGGAAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPRATEI*KRKTEL
Trigger: TAGTTCTGTTTTCCGTTTGCAAATCTCAGTAGCTCT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTGGCTAGGACCCCGGTaGGCACATTCTACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQWLGPR*AHSTLE
Trigger: CTCCAAAGTAGAATGTGCGCACCGGGGTCCTAGCCA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCAGCATCTCCGAGTTTTaGATTCTACAGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: PPSAASSVSQGPFLSARTSISEF*ILQSYK
Trigger: TTTGTAAGACTGTAGAATGCAAAACTCGGAGATGCT...GGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATTGCAACAAGGAAACCTaGACGAATGTGGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: FILQQGNLHECGAGHMQHCNKET*TNVERA
Trigger: GGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCA...ATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp CTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTCTACACTTTCATTCTaGAACAAGGAAACCTGCACG +
Preference number: 4 (lower is better)
Translates to: LHECGAGHMQHRVVVVSLSTLSF*NKETCT
Trigger: CGTGCAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...GAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CCA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCCTTCAGAGTGAAGTGTaGCTAGTCTATTATAAAACG +
Preference number: 4 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPLQSEV*LVYYKT
Trigger: CGTTTTATAATAGACTAGCCACACTTCACTCTGAAG...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACAGCAAGATGACGGGATaGAGAAACACACCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHSKMTG*RNTPAG
Trigger: GCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCT...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCTGTTGTTAACCCCTaGCCTCAGGAAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRPVVNP*PQENYL
Trigger: CAGGTAGTTTTCCTGAGGCCAGGGGTTAACAACAGG...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACACACAAATCCCAACCTaGCCGCCTGTGTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDTQIPT*PPVCHQ
Trigger: CTGGTGACACACAGGCGGCCAGGTTGGGATTTGTGT...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGAAGGGGTGGTGGAATaGGGCTGCAATGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDEGVVE*GCNVGH
Trigger: ATGACCCACATTGCAGCCCCATTCCACCACCCCTTC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAAGCAAAAGGGGTGCTaGAATGTGACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQKQKGC*NVTLAW
Trigger: CCATGCCAACGTCACATTCCAGCACCCCTTTTGCTT...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCGAGATTGGCCTTCTTTaGTCTTTGTTTTTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLEIGLL*SLFLGN
Trigger: GTTACCCAAAAACAAAGACCAAAGAAGGCCAATCTC...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDDSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCAGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATT +
Preference number: 4 (lower is better)
Translates to: FHSATRKPARMWSGPYAADSCSG*MWLPGI
Trigger: AATACCGGGAAGCCACATGCAGCCACTGCAAGAGTC...TGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCTTTTCGAGCGAGTTaGTCCACTCCTTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKSFRAS*STPSAG
Trigger: ACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTTCTACACTTTCATTCTaGAACAAGGAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVCLGRATGDVPVTRTAASTLSF*NKETFF
Trigger: AAAGAAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCATGAGTGTCACTTTCTaGTTAAACGGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPMSVTF*LNGQGS
Trigger: GCTTCCTTGGCCGTTTAAGCAGAAAGTGACACTCAT...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACCATTTCCCGCTTGCTaGCAGGGCCCTGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTPFPAC*QGPVMR
Trigger: CCGCATCACAGGGCCCTGGCAGCAAGCGGGAAATGG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGACCGGCTTAATTCATaGACAAACGACTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPDRLNS*TNDSVG
Trigger: ACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGGACCGGCTTAATTCATaGACAAACGACTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRDRLNS*TNDSVG
Trigger: ACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTC...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTATTTTACAGCTCTaGCAGAGCCCTTCTGACACA +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRSILQL*QSPSDT
Trigger: TGTGTCAGAAGGGCTCTGGCAGAGCTGTAAAATACT...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGTGCAGCGTCGACACTaGCCTCCACACTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVVQRRH*PPHFTD
Trigger: GTCTGTGAAGTGTGGAGGGCAGTGTCGACGCTGCAC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGCTGCACAGCACCAGGTaGCACTTCTCACACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQLHSTR*HFSHLY
Trigger: GTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAG...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGCACTCCATTGTAGCTaGCGGTCTCCAGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNALHCS*RSPGPG
Trigger: TCCAGGTCCTGGAGACCGCCAGCTACAATGGAGTGC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAACGTTCAGGTAGACCCTaGCACACATCTTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQRSGRP*HTSYSQ
Trigger: TTGGCTATAAGATGTGTGCCAGGGTCTACCTGAACG...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTTTTCTAGAACAGTTTaGGCCACAAAGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDFSRTV*ATKTGQ
Trigger: CTGCCCAGTCTTTGTGGCCCAAACTGTTCTAGAAAA...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACTGCCTCCCTCAGGGTaGGACCAGGCCGTACTTGGA +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTLPPSG*DQAVLG
Trigger: TCCAAGTACGGCCTGGTCCCACCCTGAGGGAGGCAG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCTTCCCGCCAGGGTGGTaGTCAGGAGCGCCCGTTGGT +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCFPPGW*SGAPVG
Trigger: ACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAA...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCTGTGGGCGCGGCTTGTaGGCGAGTGGCACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCCGRGL*ASGTGV
Trigger: CACACCTGTGCCACTCGCCCACAAGCCGCGCCCACA...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAAATGTGACGTTGGCATaGTCGACATCCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKNVTLA*STSMGH
Trigger: GTGTCCCATGGATGTCGACCATGCCAACGTCACATT...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGGTCAAATGAGAGATTaGCCTTCTTTGGTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTGQMRD*PSLVFV
Trigger: AACAAAGACCAAAGAAGGCCAATCTCTCATTTGACC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGA +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVLTMLS*HAVHFG
Trigger: TCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR TCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCACTCCTTCAGCAGGTTaGCGTGCTGCACGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCTPSAG*RAARRS
Trigger: GCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGT...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: CRFLRLTRSFSEREDLSERDSKQ*VEKMPS
Trigger: AGATGGCATTTTCTCAACTCACTGTTTACTGTCTCT...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTATATTATACATTTTGTaGAGGGGAAGTTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: EEAANLQMLCSVDTALHTILYIL*RGSCRD
Trigger: ATCCCTGCAACTTCCCCTTCACAAAATGTATAATAT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAGTTTCTGTAAAGTACTaGGCAGCTCTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSVSVKY*AALSCW
Trigger: CCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAAC...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGCTCACAGTAACAACATaGTTATTGCTGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDRLTVTT*LLLGNN
Trigger: GTTATTGCCCAGCAATAATCATGTTGTTACTGTGAG...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCCACGCGTCCGCCTTCTaGCGCTTCCTCCGTCTCACA +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCHASAF*RFLRLT
Trigger: TGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTG...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAGTTTTCCGCAGCTTCTaGAGGAAGTCCTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRVFRSF*RKSFLY
Trigger: ATAAAGGAAGGACTTCCTGCAGAAGCTGCGGAAAAC...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACTGGCTAGGACCCCGGTaGGCACATTCTACTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNWLGPR*AHSTLE
Trigger: CTCCAAAGTAGAATGTGCGCACCGGGGTCCTAGCCA...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGGCAGAGAAGAGGCTaGGAATCTGCAGATGCTGTG +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKRQRRG*ESADAV
Trigger: CACAGCATCTGCAGATTCGCAGCCTCTTCTCTGCCG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACCTGTTGTTAACCCCTaGCCTCAGGAAAACTACCTG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSPVVNP*PQENYL
Trigger: CAGGTAGTTTTCCTGAGGCCAGGGGTTAACAACAGG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCTGGAGCAGGCTGACGTaGTCTGGGAGGCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCWSRLT*SGRQLA
Trigger: AGCCAGCTGCCTCCCAGACCACGTCAGCCTGCTCCA...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCGTAGAGGGAGGAGTCTaGGAGGGCCGGGGATTGAGC +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCVEGGV*EGRGLS
Trigger: GCTCAATCCCCGGCCCTCCCAGACTCCTCCCTCTAC...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGGAGATTGGCCTTCTTTaGTCTTTGTTTTTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SVSQGPFLSARTSVKTDREIGLL*SLFLGN
Trigger: GTTACCCAAAAACAAAGACCAAAGAAGGCCAATCTC...CCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACAGGACCCAAATCACTaGTCACAAAATCACTTGGAC +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRQDPNH*SQNHLD
Trigger: GTCCAAGTGATTTTGTGACCAGTGATTTGGGTCCTG...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTCAACATGATTATTGCTaGGCAATAACTCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSQHDYC*AITHGL
Trigger: AAGACCGTGAGTTATTGCCCAGCAATAATCATGTTG...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
3UTR CAA 72 bp GAGGCTTGCGCTCAGGAGACAGAACCACATTCATGCTaGATGGCTCCTAGAATTGACACAAATCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: EACAQETEPHSC*MAPRIDTNPNL
Trigger: CAGGTTGGGATTTGTGTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTGTTGGGGTCGGGCTTaGATGCATCTCCCAAATGAC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVCWGRA*MHLPND
Trigger: GTCATTTGGGAGATGCATTCAAGCCCGACCCCAACA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGATTTTACTTAACATGCTaGCATGTCCAGCTATCCCCA +
Preference number: 4 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRFYLTC*HVQLSP
Trigger: TGGGGATAGCTGGACATGTCAGCATGTTAAGTAAAA...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACAGAGACAGTAAACAGTaGGTTGAGAAAATGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDRDSKQ*VEKMPS
Trigger: AGATGGCATTTTCTCAACTCACTGTTTACTGTCTCT...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGAAGTCCTTCCTTTATaGGCAGGGACACACGACTCC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVEVLPL*AGTHDS
Trigger: GGAGTCGTGTGTCCCTGCTCATAAAGGAAGGACTTC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCGTTCAGGTAGACCCTaGCACACATCTTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHRSGRP*HTSYSQ
Trigger: TTGGCTATAAGATGTGTGCCAGGGTCTACCTGAACG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATTTTCTAGAACAGTTTaGGCCACAAAGACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKFSRTV*ATKTGQ
Trigger: CTGCCCAGTCTTTGTGGCCCAAACTGTTCTAGAAAA...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTGCTTCTAATCACAGTTaGACACTGAGAGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVASNHS*TLRDSK
Trigger: TTTACTGTCTCTCAGTGTCCAACTGTGATTAGAAGC...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAGCTTCTAATCACAGTTaGACACTGAGAGACAGTAAA +
Preference number: 4 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAASNHS*TLRDSK
Trigger: TTTACTGTCTCTCAGTGTCCAACTGTGATTAGAAGC...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTCTGGCTGTAGGATGTaGGTCCACCATGCTGACTAC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVSGCRM*VHHADY
Trigger: GTAGTCAGCATGGTGGACCCACATCCTACAGCCAGA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCAACATGATTATTGCTaGGCAATAACTCACGGTCTT +
Preference number: 4 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRQHDYC*AITHGL
Trigger: AAGACCGTGAGTTATTGCCCAGCAATAATCATGTTG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGTTTCTGTAAAGTACTaGGCAGCTCTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNVSVKY*AALSCW
Trigger: CCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAAC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCTTCCAATTAAGTCATTaGATTTGCTGTTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPFQLSH*ICCWRV
Trigger: TACCCTCCAACAGCAAATTCAATGACTTAATTGGAA...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAAAAGACAGGGTCAAATaGGAGATTGGCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSKDRVK*EIGLLW
Trigger: CCAAAGAAGGCCAATCTCTCATTTGACCCTGTCTTT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACAAAGACAGGGTCAAATaGGAGATTGGCCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHKDRVK*EIGLLW
Trigger: CCAAAGAAGGCCAATCTCTCATTTGACCCTGTCTTT...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAAGACCGTTGACGGCATaGAGCAAGATGACGGGATGG +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTRPLTA*SKMTGW
Trigger: CCATCCCGTCATCTTGCTGCATGCCGTCAACGGTCT...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCCACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCHAFST*SRRSFL
Trigger: GAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTG...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCTTCAGAGTGAAGTGTaGCTAGTCTATTATAAAACG +
Preference number: 4 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDLQSEV*LVYYKT
Trigger: CGTTTTATAATAGACTAGCCACACTTCACTCTGAAG...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACACAGTTCGCACACATTaGTTTTGCCTAAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDTVRTH*FCLRST
Trigger: GGTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGT...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCAATGTGACGTTGGCATaGTCGACATCCATGGGACAC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVNVTLA*STSMGH
Trigger: GTGTCCCATGGATGTCGACCATGCCAACGTCACATT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGAGATTGGCCTTCTTTaGTCTTTGTTTTTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQEIGLL*SLFLGN
Trigger: GTTACCCAAAAACAAAGACCAAAGAAGGCCAATCTC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACAGAAGTAGATTTGGGTaGCAGACCCTCATTCACCTC +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNRSRFG*QTLIHL
Trigger: GAGGTGAATGAGGGTCTGTCACCCAAATCTACTTCT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAATTCCAATTAAGTCATTaGATTTGCTGTTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQFQLSH*ICCWRV
Trigger: TACCCTCCAACAGCAAATTCAATGACTTAATTGGAA...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGTCTACACTTTCATTCTaGAACAAGGAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMSTLSF*NKETFF
Trigger: AAAGAAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCAATCTGCAGATGCTGTaGAGCGTCGACACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCNLQML*SVDTAL
Trigger: GAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATT...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCACTGTGTTGAGTACATaGGAGGAAGACACACTCAGA +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVTVLST*EEDTLR
Trigger: TCTGAGTGTGTCTTCCTCTCATGTACTCAACACAGT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TTTTTCTACACTTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATG +
Preference number: 4 (lower is better)
Translates to: FFYTFILQQGNLHECGAGSRPFL*SQDAHM
Trigger: CATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGA...GCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAAGTGTAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR GCA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAATCTACACTTTCATTCTaGAACAAGGAAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQSTLSF*NKETFF
Trigger: AAAGAAGGTTTCCTTGTTGCAGAATGAAAGTGTAGA...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCAATCACCGGACATCATaGCAGCTTGTGTGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVNHRTS*QLVCFP
Trigger: TGGAAAACACACAAGCTGGCATGATGTCCGGTGATT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGTCAGGACGCACACATaGAAGTTCTTCAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNVRTHT*KFFKMA
Trigger: TGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGAC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TTTTTCTACACTTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCGTCAGGACGCACACATaGAAGTTCTTCAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: FFYTFILQQGNLHECGAGVRTHT*KFFKMA
Trigger: TGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGAC...GCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAAGTGTAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAAAGCAAAAGGGGTGCTaGAATGTGACGTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTKQKGC*NVTLAW
Trigger: CCATGCCAACGTCACATTCCAGCACCCCTTTTGCTT...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCAGGACCCAAATCACTaGTCACAAAATCACTTGGAC +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKQDPNH*SQNHLD
Trigger: GTCCAAGTGATTTTGTGACCAGTGATTTGGGTCCTG...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGA +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVLTMLS*HAVHFG
Trigger: TCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAA...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATGTCCCAGCATTAACTaGTCTGCACAACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTCPSIN*SAQPLL
Trigger: AAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACAGAGCTACTGAGATTTaGAAACGGAAAACAGAACTA +
Preference number: 4 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDRATEI*KRKTEL
Trigger: TAGTTCTGTTTTCCGTTTGCAAATCTCAGTAGCTCT...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAAGCATCTCCGAGTTTTaGATTCTACAGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSSISEF*ILQSYK
Trigger: TTTGTAAGACTGTAGAATGCAAAACTCGGAGATGCT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCTTCAGAGTGAAGTGTaGCTAGTCTATTATAAAACG +
Preference number: 4 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHLQSEV*LVYYKT
Trigger: CGTTTTATAATAGACTAGCCACACTTCACTCTGAAG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCGCGGTACAGCGATCCTaGACTTCTAGCCTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCAVQRS*TSSLFS
Trigger: TGAAAAGAGGCTAGAAGTCCAGGATCGCTGTACCGC...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGAGAAAACAGAGCTACTaGGATTTGCAAACGGAAAAC +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKRKQSY*DLQTEN
Trigger: GTTTTCCGTTTGCAAATCTCAGTAGCTCTGTTTTCT...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCCTCACAGTAACAACATaGTTATTGCTGGGCAATAAC +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVLTVTT*LLLGNN
Trigger: GTTATTGCCCAGCAATAATCATGTTGTTACTGTGAG...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAATGAGTGTCACTTTCTaGTTAAACGGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTMSVTF*LNGQGS
Trigger: GCTTCCTTGGCCGTTTAAGCAGAAAGTGACACTCAT...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCACAGAACCACATTCATaGTTGATGGCTCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVTEPHS*LMAPRI
Trigger: AATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGT...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGTGGCATCACTTCTTTaGGCCTCATTTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTVASLL*ASFSSS
Trigger: AGATGAGGAAAATGAGGCCCAAAGAAGTGATGCCAC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS-3UTR CCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGGGTCACAAAATCACTTaGACTGTCAAGATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKGHKIT*TVKMCL
Trigger: AAGACACATCTTGACAGTCCAAGTGATTTTGTGACC...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CCA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGGTCACAAAATCACTTaGACTGTCAAGATGTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNGHKIT*TVKMCL
Trigger: AAGACACATCTTGACAGTCCAAGTGATTTTGTGACC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCGACCGGCTTAATTCATaGACAAACGACTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCDRLNS*TNDSVG
Trigger: ACCAACTGAGTCGTTTGTGCATGAATTAAGCCGGTC...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR GCA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGAGCATCTCCGAGTTTTaGATTCTACAGTCTTACAAA +
Preference number: 4 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKSISEF*ILQSYK
Trigger: TTTGTAAGACTGTAGAATGCAAAACTCGGAGATGCT...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR TCA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATTCCAATTAAGTCATTaGATTTGCTGTTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: CQDVSSQQAATTDATFKTFQLSH*ICCWRV
Trigger: TACCCTCCAACAGCAAATTCAATGACTTAATTGGAA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLGPAGQ*WARLVG
Trigger: GCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCC...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGGGAGGGCCGGGGATaGAGCAAGGGGCCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSWEGRG*SKGPAR
Trigger: CCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCCA...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPGPAGQ*WARLVG
Trigger: GCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGTGGGAGGGCCGGGGATaGAGCAAGGGGCCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLWEGRG*SKGPAR
Trigger: CCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCCA...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTGGAGCAGCGCAAGGCTaGCCCGCCGCCGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFGAAQG*PAAGRG
Trigger: CCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCC...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGGGGTCCGGCGAGGCTaGCGCTCAGGAGACAGAACC +
Preference number: 5 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPGVRRG*RSGDRT
Trigger: GGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCCC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVHSFSR*TCCTAE
Trigger: CTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTG...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTGTGTTCCGAGCCACTaGCCCCGCGCTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLCVPSH*PRALVH
Trigger: GTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACA...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCTGGCCTCGTGGGCCTaGATCTGCTGGTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLLASWA*ICWFVP
Trigger: GGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSTCPAL*STLSSS
Trigger: CGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGT...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCAAACGCAGGCTCTGCTaGGCCACCGGGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVKRRLC*ATGASS
Trigger: TGAGGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTT...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTGGCCTCGTGGGCCTaGATCTGCTGGTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVLASWA*ICWFVP
Trigger: GGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTGTGTTCCGAGCCACTaGCCCCGCGCTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVCVPSH*PRALVH
Trigger: GTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSTCPAL*STLSSS
Trigger: CGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGT...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFTCPAL*STLSSS
Trigger: CGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGT...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGAC +
Preference number: 5 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRALRTT*LSETVD
Trigger: GTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCGCAGGGATGTCCCTGTaGTTAACCCCTGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSAGMSL*LTPGLR
Trigger: CCTGAGGCCAGGGGTTAACAACAGGGACATCCCTGC...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACGCAGGGATGTCCCTGTaGTTAACCCCTGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PETAEASHVCPATACGAHAGMSL*LTPGLR
Trigger: CCTGAGGCCAGGGGTTAACAACAGGGACATCCCTGC...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTGGCACTTCTCACACTaGTACTTGTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVWHFSH*YLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCA...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCTGTACATTTTGGACTaGAAGAGCTCAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLLYILD*KSSAGP
Trigger: CGGCCCTGCTGAGCTCTTCAAGTCCAAAATGTACAG...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACTGTACATTTTGGACTaGAAGAGCTCAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSLYILD*KSSAGP
Trigger: CGGCCCTGCTGAGCTCTTCAAGTCCAAAATGTACAG...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLFFSSE*LHSFSR
Trigger: CCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRKGRIS*SSSFSF
Trigger: GAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTT...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGGGGGTCCGGCGAGGCTaGCGCTCAGGAGACAGAACC +
Preference number: 5 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEGVRRG*RSGDRT
Trigger: GGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCCC...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCCTGTTCAACTGGCTGTaGTGGCATCGAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSLFNWL*WHRRDT
Trigger: TGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAG...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCAGACTCCCCTTCCTTaGTCCAACATCACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLQTPLP*SNITSG
Trigger: GCCAGAGGTGATGTTGGACAAAGGAAGGGGAGTCTG...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS CCA 90 bp TGCCCCGCGCTCTTGTCCACGCTCTCCAGCTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTCTTCATGCTGTCTGCTTCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: CPALLSTLSSSVTRF*RDSTLLFMLSASSQ
Trigger: CTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTGGCACTTCTCACACTaGTACTTGTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPWHFSH*YLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVGPMASRQERLPGKGYWFFSSE*LHSFSR
Trigger: CCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RCAHAWLLPPARVRLLPLFFSSE*LHSFSR
Trigger: CCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA...AAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGCGTCTGCCTGGGAAGGGCTACTGGAGACGTCCCAGTGACACGCACTGCTGCTACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SVCLGRATGDVPVTRTAATCPAL*STLSSS
Trigger: CGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGT...AGCAGCAGTGCGTGTCACTGGGACGTCTCCAGTAGCCCTTCCCAGGCAGACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTGTGTTCCGAGCCACTaGCCCCGCGCTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: RQIRTTERFDRERARRAPCVPSH*PRALVH
Trigger: GTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGGTGGGCCCCATGGCGTCCCGCCAGGAGCGTCTGCCTGGGAAGGGCTACTGGTCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCG +
Preference number: 5 (lower is better)
Translates to: QVGPMASRQERLPGKGYWSHTLV*PKKHPS
Trigger: CGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGA...CCAGTAGCCCTTCCCAGGCAGACGCTCCTGGCGGGACGCCATGGGGCCCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTGTTCAACTGGCTGTaGTGGCATCGAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPLFNWL*WHRRDT
Trigger: TGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAG...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTTGCTGGAATGTGACGTaGGCATGGTCGACATCCATG +
Preference number: 5 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPCWNVT*AWSTSM
Trigger: CATGGATGTCGACCATGCCAACGTCACATTCCAGCA...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp CCAGCTCGGTCACGCGGTTCTGGAGGGACTCCACGCTGCTCTTCATaGTGTCTGCTTCCTCCCAGTTCTGCCGGAAGGGCCGGATCTCCT +
Preference number: 5 (lower is better)
Translates to: PARSRGSGGTPRCSS*CLLPPSSAGRAGSP
Trigger: AGGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS CCA 90 bp CACTCCTTCAGCAGGTTGACGTGCTGCACGGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTTGTCCCCTGCAGCGCGATCATCGGA +
Preference number: 5 (lower is better)
Translates to: HSFSRLTCCTAELAS*ALICWFVPCSAIIG
Trigger: TCCGATGATCGCGCTGCAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS-3UTR CAA 90 bp TCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: SRVAPPAGTRPPSAASSVLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...GACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LCLATGASSPAHLPAPRRDSSHT*VLPKKH
Trigger: GTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAATTGTGGGCGCGGCTaGTGGGCGAGTGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVNCGRG*WASGTG
Trigger: ACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGTTTGTGAAGGGGAAGTaGCAGGGATGTCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLFVKGK*QGCPCC
Trigger: ACAACAGGGACATCCCTGCAACTTCCCCTTCACAAA...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCATTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSFLVTS*FRDKNW
Trigger: CCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAA...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGGCACTTCTCACACTaGTACTTGTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLWHFSH*YLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCA...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCAGTTTCTCTGCTaGGCTGTCTATCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVLQFLC*AVYHSL
Trigger: CAGCGAGTGATAGACAGCCAAGCAGAGAAACTGAAG...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCCTTCAGTTTCTCTGCTaGGCTGTCTATCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSLQFLC*AVYHSL
Trigger: CAGCGAGTGATAGACAGCCAAGCAGAGAAACTGAAG...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGAC +
Preference number: 5 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFALRTT*LSETVD
Trigger: GTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAG +
Preference number: 5 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSVGPRD*ESVVIK
Trigger: CTTAATTACCACAGATTCCAAATCTCTAGGCCCCAC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAG +
Preference number: 5 (lower is better)
Translates to: LCLATGASSPAHLPAPRRVGPRD*ESVVIK
Trigger: CTTAATTACCACAGATTCCAAATCTCTAGGCCCCAC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGGACCAGGCCGTACTaGGACCAGGCGGCTCACTCG +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEGTRPY*DQAAHS
Trigger: CGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPDSSHT*VLPKKH
Trigger: GTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTC...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCAATTGTGGGCGCGGCTaGTGGGCGAGTGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLNCGRG*WASGTG
Trigger: ACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATT...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAGCAGGGATGTCCCTGTaGTTAACCCCTGGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPAGMSL*LTPGLR
Trigger: CCTGAGGCCAGGGGTTAACAACAGGGACATCCCTGC...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGTGAAGGGGAAGTaGCAGGGATGTCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSFVKGK*QGCPCC
Trigger: ACAACAGGGACATCCCTGCAACTTCCCCTTCACAAA...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCAGACTCCCCTTCCTTaGTCCAACATCACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PAGTRPPSAASSVSQGPFQTPLP*SNITSG
Trigger: GCCAGAGGTGATGTTGGACAAAGGAAGGGGAGTCTG...AAAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CACACCCCAACGTCTAGCTCTGCAGGCTCCGCGGGACAAGCCCTAGAACCAGAGGTGTCAGCCCAGCTGTaGGGATCAGTGTACTCCCCG +
Preference number: 5 (lower is better)
Translates to: HTPTSSSAGSAGQALEPEVSAQL*GSVYSP
Trigger: CGGGGAGTACACTGATCCCAACAGCTGGGCTGACAC...CTCTGGTTCTAGGGCTTGTCCCGCGGAGCCTGCAGAGCTAGACGTTGGGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGAAACGCAGGCTCTGCTaGGCCACCGGGGCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AASSVSQGPFLSARTSVKKRRLC*ATGASS
Trigger: TGAGGAGGCCCCGGTGGCCAAGCAGAGCCTGCGTTT...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTTGGAGGGTATCTTACTaGTCTGAGGGGACTAAGTTG +
Preference number: 5 (lower is better)
Translates to: CAHAWLLPPARVRLLPLPWRVSY*SEGTKL
Trigger: CAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCA...AGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGGGTCAAATGAGAGATaGGCCTTCTTTGGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: CSRVAPPAGTRPPSAASSGSNER*AFFGLC
Trigger: ACAAAGACCAAAGAAGGCCAATCTCTCATTTGACCC...GGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCCAGGTGCTGGGGGCATaGACACACTCTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSQVLGA*THSDKC
Trigger: ACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCTG...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392745.8
ENST00000560371.5
CDS TCA 90 bp TGGTTTGTCCCCTCGCTCCTCAGGAGAGTCTGGACGCTGCACTTGTaGGGGCAGGACACCACCACGCAGGGACAGTCGGTGTCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: WFVPSLLRRVWTLHL*GQDTTTQGQSVSSC
Trigger: ACACGAAGACACCGACTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGGGGACAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS GCA 90 bp CCTTGTTCAGGGACAAAAACTGGCGTCCCAGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTAGTCTGCAGCGCGCCAGGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: PCSGTKTGVPALRSV*SFSGGLVCSAPGES
Trigger: GGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS GCA 90 bp GGTCACGCGGTTCTGGAGGGACTCCACGCTGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCGGAAGGGCCGGATCTCCTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: GHAVLEGLHAALHAV*FLPVLPEGPDLLVK
Trigger: CTTGACAAGGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCCTGTACATTTTGGACTaGAAGAGCTCAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSLYILD*KSSAGP
Trigger: CGGCCCTGCTGAGCTCTTCAAGTCCAAAATGTACAG...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGTTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: LCLATGASSPAHLPAPRRFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCTCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCG +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSSHTLV*PKKHPS
Trigger: CGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGA...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGGAGCAGCGCAAGGCTaGCCCGCCGCCGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDGAAQG*PAAGRG
Trigger: CCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCGTGGCCACCCTTCCCGCCAGGGTGGTGGTCAGGAGCGCCCGTTGGTCAGCCTGAACCACATTCATGCTaGATGGCTCCTAGAATTGAC +
Preference number: 5 (lower is better)
Translates to: PWPPFPPGWWSGAPVGQPEPHSC*MAPRID
Trigger: GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTC...AGGCTGACCAACGGGCGCTCCTGACCACCACCCTGGCGGGAAGGGTGGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGAACCACATTCATGCTaGATGGCTCCTAGAATTGAC +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLEPHSC*MAPRID
Trigger: GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTGGAGGGTATCTTACTaGTCTGAGGGGACTAAGTTG +
Preference number: 5 (lower is better)
Translates to: SSRRHASAFCRFLRLTRSWRVSY*SEGTKL
Trigger: CAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCA...GGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCGGACATCATGCCAGCTaGTGTGTTTTCCAATTAAGT +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLGHHAS*CVFQLS
Trigger: ACTTAATTGGAAAACACACAAGCTGGCATGATGTCC...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGGGGTCAAATGAGAGATaGGCCTTCTTTGGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLGSNER*AFFGLC
Trigger: ACAAAGACCAAAGAAGGCCAATCTCTCATTTGACCC...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCTGGTCACAAAATCACTaGGACTGTCAAGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: VLTRGSSRRHASAFCRFLWSQNH*DCQDVS
Trigger: AGACACATCTTGACAGTCCAAGTGATTTTGTGACCA...GAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS TCA 90 bp TGTGCACTCAACTCGCTCCTCAGGAGAGTCTGGACGCTGCACTTGTaGGGGCAGGACACCACCACGCAGGGACAGTCGGTGTCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: CALNSLLRRVWTLHL*GQDTTTQGQSVSSC
Trigger: ACACGAAGACACCGACTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGTTGAGTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS TCA 90 bp CTGTGGAATGGGAGGACCCGCACCTGCAGCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCC +
Preference number: 5 (lower is better)
Translates to: LWNGRTRTCSAIIGT*LLQWLHVASRYLHA
Trigger: GGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTGCGGGTCCTCCCATTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558880.1
CDS GCA 90 bp CTGACAAGTGTGCACTCAACTCGCTCCTCAGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACACCACCACGCAGGGACAGTCGGTGT +
Preference number: 5 (lower is better)
Translates to: LTSVHSTRSSGESGR*TCEGRTPPRRDSRC
Trigger: ACACCGACTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGTTGAGTGCACACTTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS GCA 90 bp CCCGCACCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PAPAARSSEPDSCSG*MWLPGIYTPSPRGL
Trigger: GAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558880.1
CDS GCA 90 bp CCCTTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: PFFSSELLHSFSRLT*CTAELASWALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCTTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVFLVTS*FRDKNW
Trigger: CCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAA...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGTTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: RVRCAHAWLLPPARVRLLFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...CAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCAGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCACGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: LTRGSSRRHASAFCRFLRARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...ACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: LCLATGASSPAHLPAPRRARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAATGTGTTCCGAGCCACTaGCCCCGCGCTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSECVPSH*PRALVH
Trigger: GTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACA...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTGTGTTCCGAGCCACTaGCCCCGCGCTCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSCVPSH*PRALVH
Trigger: GTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACA...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS GCA 90 bp TTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGCTGGTTTGTC +
Preference number: 5 (lower is better)
Translates to: FFSSELLHSFSRLTC*TAELASWALICWFV
Trigger: GACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 90 bp ACCTTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: TFFSSELLHSFSRLT*CTAELASWALICWF
Trigger: AAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000559734.1
ENST00000560371.5
CDS GCA 90 bp ATGGGAGGACCCGCACCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: MGGPAPAARSSEPDS*SGCMWLPGIYTPSP
Trigger: TGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTGCGGGTCCTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558880.1
CDS CCA 90 bp GATTCTGACCTGCTCTGGGACCTTAACCAAGTGGCATCACTTCTTTaGGCCTCATTTTCCTCATCTCGCGGTCCGTCGCCGCTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: DSDLLWDLNQVASLL*ASFSSSRGPSPLGR
Trigger: CCGGCCGAGCGGCGACGGACCGCGAGATGAGGAAAATGAGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAGGTCAGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS CCA 90 bp CCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PAARSSEPDSCSGCM*LPGIYTPSPRGLAG
Trigger: ACCTGCGAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539721.5
ENST00000558880.1
ENST00000559734.1
CDS-3UTR CAA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGACACGCTGTACATTTaGGACTTGAAGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFDTLYI*DLKSSA
Trigger: TGCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp GCTTGCACGTGGCTCAGTGTGGTCACAAGAGCCAGTGCCCTTCACGTGAGCCGGAATCCCCCAGAGGAGTaGCCTTCTGCTAAATCCACC +
Preference number: 5 (lower is better)
Translates to: ACTWLSVVTRASALHVSRNPPEE*PSAKST
Trigger: GGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATT...CCGGCTCACGTGAAGGGCACTGGCTCTTGTGACCACACTGAGCCACGTGCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCTGCTTGGCCACCGGGGCCTCCTCACCCGCACACCTGCCAGCCCCGAGACGGAACACCTACAGGATTTaGTTTAGAACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LCLATGASSPAHLPAPRRNTYRI*FRTPKF
Trigger: GAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTT...CCGTCTCGGGGCTGGCAGGTGTGCGGGTGAGGAGGCCCCGGTGGCCAAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCAATTGTGGGCGCGGCTaGTGGGCGAGTGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPNCGRG*WASGTG
Trigger: ACCTGTGCCACTCGCCCACAAGCCGCGCCCACAATT...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGGAGCAGCGCAAGGCTaGCCCGCCGCCGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVGAAQG*PAAGRG
Trigger: CCCTCTCCCGGCGGCGGGCAAGCCTTGCGCTGCTCC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGCGTGGCTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCATTTCCAATTAAGTCATaGAATTTGCTGTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: RVAPPAGTRPPSAASSVSFPIKS*NLLLEG
Trigger: ACCCTCCAACAGCAAATTCAATGACTTAATTGGAAA...TGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAGCCACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp TTGTCCCCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LSPAARSSEPDSCSG*MWLPGIYTPSPRGL
Trigger: GAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS CCA 90 bp AAGCGGTGCCCACACTCGGTCTGCTTCGGGCTGCACAGCACCAGGTaGCACTTCTCACACTTGTACTTGTCCTCCACGGTCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: KRCPHSVCFGLHSTR*HFSHLYLSSTVFTN
Trigger: GTTTGTGAAGACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCACCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS CCA 90 bp TCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SAARSSEPDSCSGCM*LPGIYTPSPRGLAG
Trigger: ACCTGCGAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACTGGCCTCGTGGGCCTaGATCTGCTGGTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRLASWA*ICWFVP
Trigger: GGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAG...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp ATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTACACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: MWSGPYAASRGSCVPLKVHSFSR*TCCTAE
Trigger: CTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTG...TACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRHSFSR*TCCTAE
Trigger: CTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTG...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGTGGGGCCTAGAGATTaGGAATCTGTGGTAATTAAG +
Preference number: 5 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFVGPRD*ESVVIK
Trigger: CTTAATTACCACAGATTCCAAATCTCTAGGCCCCAC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGGGACCAGGCCGTACTaGGACCAGGCGGCTCACTCG +
Preference number: 5 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQGTRPY*DQAAHS
Trigger: CGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp CGTGTTTCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RVSAARSSEPDSCSG*MWLPGIYTPSPRGL
Trigger: GAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGAAACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS GCA 90 bp AGGGACTCCACGCTGCTCTTCATGCTGTCTGCTTCCTCCCAGTTCTaGCGGAAGGGCCGGATCTCCTTGTCAAGCTCCTTCAGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RDSTLLFMLSASSQF*RKGRISLSSSFSFS
Trigger: AGAGAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 90 bp AGGAAACCTGCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RKPAARSSEPDSCSG*MWLPGIYTPSPRGL
Trigger: GAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS GCA 90 bp TCTGCTGGTTTGTCCCCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SAGLSPAARSSEPDS*SGCMWLPGIYTPSP
Trigger: TGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGGGACAAACCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS-3UTR CAA 90 bp TCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCCTGGCCTCGTGGGCCTaGATCTGCTGGTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SFCNKETCTNVERAICSILASWA*ICWFVP
Trigger: GGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAG...GATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAACACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKHSFSR*TCCTAE
Trigger: CTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTG...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSTCPAL*STLSSS
Trigger: CGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCAACACCTACAGGATTTaGTTTAGAACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LLPPARVRLLPLPPSHKVNTYRI*FRTPKF
Trigger: GAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTT...GACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTGCTCTACGCACAACGTaGCTTTCGGAGACCGTTGAC +
Preference number: 5 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSALRTT*LSETVD
Trigger: GTCAACGGTCTCCGAAAGCAACGTTGTGCGTAGAGC...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCTGTTGGAGGGTATCTTACTTGTCTGAGGGGACTAAGTTGTCAAATCCAGTCGGCCCAGCTGGCCAATaGTGGGCGCGGCTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: CCWRVSYLSEGTKLSNPVGPAGQ*WARLVG
Trigger: GCCCACAAGCCGCGCCCACAATTGGCCAGCTGGGCC...GACTGGATTTGACAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTGCTGGAATGTGACGTaGGCATGGTCGACATCCATG +
Preference number: 5 (lower is better)
Translates to: AASSVSQGPFLSARTSVKCWNVT*AWSTSM
Trigger: CATGGATGTCGACCATGCCAACGTCACATTCCAGCA...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GAGGAAGACACACTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGTGGGAGGGCCGGGGATaGAGCAAGGGGCCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: EEDTLRTETPIQPNTKTKWEGRG*SKGPAR
Trigger: CCTTGCGGGCCCCTTGCTCAATCCCCGGCCCTCCCA...CTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAGTGTGTCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTCATTGAATTTGCTGTaGGAGGGTATCTTACTTGTC +
Preference number: 5 (lower is better)
Translates to: LPPARVRLLPLPPSHKVLSLNLL*EGILLV
Trigger: GACAAGTAAGATACCCTCCAACAGCAAATTCAATGA...AAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCCGAGACGGCCGAGGCTTCACACGTCTGCCCTGCCACCGCATGTGGGGCACACTTTCCAATTAAGTCATaGAATTTGCTGTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: PETAEASHVCPATACGAHFPIKS*NLLLEG
Trigger: ACCCTCCAACAGCAAATTCAATGACTTAATTGGAAA...GTGTGCCCCACATGCGGTGGCAGGGCAGACGTGTGAAGCCTCGGCCGTCTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGGACATCATGCCAGCTaGTGTGTTTTCCAATTAAGT +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSGHHAS*CVFQLS
Trigger: ACTTAATTGGAAAACACACAAGCTGGCATGATGTCC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACAGGTGCTGGGGGCATaGACACACTCTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEQVLGA*THSDKC
Trigger: ACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCTG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp GTCCCAGCACTGCGGTCAGTGTGCAGCTTTAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCCATCTTTTTACTCGACTCCATTTTA +
Preference number: 5 (lower is better)
Translates to: VPALRSVCSFSGGLV*SAPGESIFLLDSIL
Trigger: TAAAATGGAGTCGAGTAAAAAGATGGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGCTGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS GCA 90 bp CGGTGTCTTCGTGTTTCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RCLRVSAARSSEPDS*SGCMWLPGIYTPSP
Trigger: TGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGAAACACGAAGACACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: RQIRTTERFDRERARRAPFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCGCCGGCACGCGTCCGCCTTCTGCCGCTTCCTCCGTCTCACAAGGTCCTTTGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SRRHASAFCRFLRLTRSFARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...AAAGGACCTTGTGAGACGGAGGAAGCGGCAGAAGGCGGACGCGTGCCGGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCCAACCTGGCCGCCTGTGTGTCACCAGAGCACGGCGAGCTGAAAGGCCCAGCGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: SQPGRLCVTRARRAERPSARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...GCTGGGCCTTTCAGCTCGCCGTGCTCTGGTGACACACAGGCGGCCAGGTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCTGCTTTCGGAGACCGTaGACGGCATGCAGCAAGATG +
Preference number: 5 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPCFRRP*TACSKM
Trigger: CATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCA...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCACAGTAAACAGTGAGTaGAGAAAATGCCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPTVNSE*RKCHLG
Trigger: GCCCAGATGGCATTTTCTCAACTCACTGTTTACTGT...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAATCGCACACATTGGTTTaGCCTAAGAAGCACCCGTCG +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSESHTLV*PKKHPS
Trigger: CGACGGGTGCTTCTTAGGCAAAACCAATGTGTGCGA...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCTCAAGGACTCCTGTCACTCAGGTTACGTCTGTGGGACCCTCAGGTGGGCCCCGAACCACATTCATGCTaGATGGCTCCTAGAATTGAC +
Preference number: 5 (lower is better)
Translates to: PQGLLSLRLRLWDPQVGPEPHSC*MAPRID
Trigger: GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTC...GGGGCCCACCTGAGGGTCCCACAGACGTAACCTGAGTGACAGGAGTCCTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CCGTTGACGGCATGCAGCAAGATGACGGGATGGAGAAACACACCTGCGGGCCTCTCTGAGGGGACTAAGTaGTCAAATCCAGTCATCACC +
Preference number: 5 (lower is better)
Translates to: PLTACSKMTGWRNTPAGLSEGTK*SNPVIT
Trigger: GGTGATGACTGGATTTGACAACTTAGTCCCCTCAGA...GAGGCCCGCAGGTGTGTTTCTCCATCCCGTCATCTTGCTGCATGCCGTCAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGCAGATAAGAACAACGGAACGCTTCGACCGCGAAAGGGCGCGGCGGGCCCCTTGGTCACAAAATCACTaGGACTGTCAAGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: RQIRTTERFDRERARRAPWSQNH*DCQDVS
Trigger: AGACACATCTTGACAGTCCAAGTGATTTTGTGACCA...AGGGGCCCGCCGCGCCCTTTCGCGGTCGAAGCGTTCCGTTGTTCTTATCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAATCCTGCAACGGCCCAAGGAGACAGTGGCACTGCCACCCTACTGGGGCTGTGAGGAAGTCAGGCATGTaGCTAACTCACAGTAACAAC +
Preference number: 5 (lower is better)
Translates to: QSCNGPRRQWHCHPTGAVRKSGM*LTHSNN
Trigger: GTTGTTACTGTGAGTTAGCAACATGCCTGACTTCCT...CACAGCCCCAGTAGGGTGGCAGTGCCACTGTCTCCTTGGGCCGTTGCAGGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp GAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCTCCCCAGCTACTTATCAGGGATCGG +
Preference number: 5 (lower is better)
Translates to: EDLSEDRPVQIPQRS*LLLNPPPQLLIRDR
Trigger: CCGATCCCTGATAAGTAGCTGGGGAGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS GCA 90 bp TCTGCAACAAGGAAACCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SATRKPAARSSEPDS*SGCMWLPGIYTPSP
Trigger: TGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTTTCCTTGTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS-3UTR CAA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCTGTACATTTTGGACTaGAAGAGCTCAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPLYILD*KSSAGP
Trigger: CGGCCCTGCTGAGCTCTTCAAGTCCAAAATGTACAG...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGGACACGCTGTACATTTaGGACTTGAAGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTDTLYI*DLKSSA
Trigger: TGCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTC...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RKPARMWSGPYAASRGSCFFSSE*LHSFSR
Trigger: CCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA...ACAACTACCACGCGATGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAACTTCAGTTTCTCTGCTaGGCTGTCTATCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSELQFLC*AVYHSL
Trigger: CAGCGAGTGATAGACAGCCAAGCAGAGAAACTGAAG...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRKGRIS*SSSFSF
Trigger: GAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTT...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCAAATCCCCCAGAGGAGTaGCCTTCTGCTAAATCCACC +
Preference number: 5 (lower is better)
Translates to: LGNRTEQRHRQRRGCESANPPEE*PSAKST
Trigger: GGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATT...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACGTGTCAGCCCAGCTGTaGGGATCAGTGTACTCCCCG +
Preference number: 5 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDVSAQL*GSVYSP
Trigger: CGGGGAGTACACTGATCCCAACAGCTGGGCTGACAC...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp ATGTGGAGCGGGCCATATGCAGCATCGCGTGGTAGTTGTGTCCCTCTGAAAGTACAGGTGCTGGGGGCATaGACACACTCTGACAAGTGT +
Preference number: 5 (lower is better)
Translates to: MWSGPYAASRGSCVPLKVQVLGA*THSDKC
Trigger: ACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCTG...TACTTTCAGAGGGACACAACTACCACGCGATGCTGCATATGGCCCGCTCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS GCA 90 bp CAGGAGCCAGGAGCCAGGTTTCTGATCCTAGGTCTGATTCTGACCTaGTCTGGGACCTTAACCAAGTGGCATCACTTCTTTGGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: QEPGARFLILGLILT*SGTLTKWHHFFGPH
Trigger: ATGAGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAGGTCAGAATCAGACCTAGGATCAGAAACCTGGCTCCTGGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560463.5
CDS CCA 90 bp CAGTGGCTGCATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTTGCAGTCAGGA +
Preference number: 5 (lower is better)
Translates to: QWLHVASRYLHAFST*SRRSFLKTFSLQSG
Trigger: TCCTGACTGCAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS-3UTR CAA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRKGRIS*SSSFSF
Trigger: GAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGAAATCCCCCAGAGGAGTaGCCTTCTGCTAAATCCACC +
Preference number: 5 (lower is better)
Translates to: FLRLTRSFSEREDLSEDRNPPEE*PSAKST
Trigger: GGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATT...TCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGGGACCAGGCCGTACTaGGACCAGGCGGCTCACTCG +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTGTRPY*DQAAHS
Trigger: CGAGTGAGCCGCCTGGTCCAAGTACGGCCTGGTCCC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GTCTATTATAAAACGTGTCAGGTGTGCTCACGCGTGGCTCCTCCCGCCGGCACGACAGTAAACAGTGAGTaGAGAAAATGCCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: VYYKTCQVCSRVAPPAGTTVNSE*RKCHLG
Trigger: GCCCAGATGGCATTTTCTCAACTCACTGTTTACTGT...CGTGCCGGCGGGAGGAGCCACGCGTGAGCACACCTGACACGTTTTATAATAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTTTGTGAAGGGGAAGTaGCAGGGATGTCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVFVKGK*QGCPCC
Trigger: ACAACAGGGACATCCCTGCAACTTCCCCTTCACAAA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GAAGAGGCTGCGAATCTGCAGATGCTGTGCAGCGTCGACACTGCCCTCCACACTAGGAAGTCAGGCATGTaGCTAACTCACAGTAACAAC +
Preference number: 5 (lower is better)
Translates to: EEAANLQMLCSVDTALHTRKSGM*LTHSNN
Trigger: GTTGTTACTGTGAGTTAGCAACATGCCTGACTTCCT...AGTGTGGAGGGCAGTGTCGACGCTGCACAGCATCTGCAGATTCGCAGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS CCA 90 bp GCCAGGAGCCAGGTTTCTGATCCTAGGTCTGATTCTGACCTGCTCTaGGACCTTAACCAAGTGGCATCACTTCTTTGGGCCTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: ARSQVSDPRSDSDLL*DLNQVASLLWASFS
Trigger: GGAAAATGAGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAGGTCAGAATCAGACCTAGGATCAGAAACCTGGCTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560463.5
CDS-3UTR CAA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCATTCTCACACTTGTACTaGTCCTCCACGGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: LGNRTEQRHRQRRGCESAFSHLY*SSTVFT
Trigger: TGTGAAGACCGTGGAGGACAAGTACAAGTGTGAGAA...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp AGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCGACACGCTGTACATTTaGGACTTGAAGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RSFSEREDLSEDRPVQIPDTLYI*DLKSSA
Trigger: TGCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTC...GGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: FSEREDLSEDRPVQIPQRLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...CCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAAAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKKGRIS*SSSFSF
Trigger: GAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTT...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp ACAAGCAGCACCCCCAAGCACACAGTGTGCGCCCCCATTTCCCGCTTGCTGCCAAACACCTACAGGATTTaGTTTAGAACTCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: TSSTPKHTVCAPISRLLPNTYRI*FRTPKF
Trigger: GAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTT...TGGCAGCAAGCGGGAAATGGGGGCGCACACTGTGTGCTTGGGGGTGCTGCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTGCTTTCGGAGACCGTaGACGGCATGCAGCAAGATG +
Preference number: 5 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHCFRRP*TACSKM
Trigger: CATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTGCTTTCGGAGACCGTaGACGGCATGCAGCAAGATG +
Preference number: 5 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQCFRRP*TACSKM
Trigger: CATCTTGCTGCATGCCGTCAACGGTCTCCGAAAGCA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTACAGTAAACAGTGAGTaGAGAAAATGCCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: SEREDLSEDRPVQIPQRSTVNSE*RKCHLG
Trigger: GCCCAGATGGCATTTTCTCAACTCACTGTTTACTGT...ACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACGACAGTTCGCACACATaGGTTTTGCCTAAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: SSVSQGPFLSARTSVKTDDSSHT*VLPKKH
Trigger: GTGCTTCTTAGGCAAAACCAATGTGTGCGAACTGTC...GTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCGGGGTCCGGCGAGGCTaGCGCTCAGGAGACAGAACC +
Preference number: 5 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCGVRRG*RSGDRT
Trigger: GGTTCTGTCTCCTGAGCGCAAGCCTCGCCGGACCCC...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACGTGTCAGCCCAGCTGTaGGGATCAGTGTACTCCCCG +
Preference number: 5 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNVSAQL*GSVYSP
Trigger: CGGGGAGTACACTGATCCCAACAGCTGGGCTGACAC...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TTGGGTAACAGAACCGAACAGAGGCACCGGCAGAGAAGAGGCTGCGAATCTGCATCTGAGGGGACTAAGTaGTCAAATCCAGTCATCACC +
Preference number: 5 (lower is better)
Translates to: LGNRTEQRHRQRRGCESASEGTK*SNPVIT
Trigger: GGTGATGACTGGATTTGACAACTTAGTCCCCTCAGA...TGCAGATTCGCAGCCTCTTCTCTGCCGGTGCCTCTGTTCGGTTCTGTTACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TTGCCTAAGAAGCACCCGTCGCGTGTAGCACCCATCAGTGGTAAGAGCACCATGTGGAGGGTATCTTACTaGTCTGAGGGGACTAAGTTG +
Preference number: 5 (lower is better)
Translates to: LPKKHPSRVAPISGKSTMWRVSY*SEGTKL
Trigger: CAACTTAGTCCCCTCAGACAAGTAAGATACCCTCCA...CATGGTGCTCTTACCACTGATGGGTGCTACACGCGACGGGTGCTTCTTAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGGGTCAAATGAGAGATaGGCCTTCTTTGGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: CRFLRLTRSFSEREDLSEGSNER*AFFGLC
Trigger: ACAAAGACCAAAGAAGGCCAATCTCTCATTTGACCC...TTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCATGGCACTTCTCACACTaGTACTTGTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSWHFSH*YLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCA...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAGACACGCTGTACATTTaGGACTTGAAGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LTRSFSEREDLSEDRPVQDTLYI*DLKSSA
Trigger: TGCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTC...TTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp GCTTGCGCTCAGGAGACAGAACCACATTCATGCTTGATGGCTCCTAGAATTGACTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ACAQETEPHSCLMAPRIDFFSSE*LHSFSR
Trigger: CCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA...GTCAATTCTAGGAGCCATCAAGCATGAATGTGGTTCTGTCTCCTGAGCGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GCCGCTTCCTCCGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGTCATTGAATTTGCTGTaGGAGGGTATCTTACTTGTC +
Preference number: 5 (lower is better)
Translates to: AASSVSQGPFLSARTSVKSLNLL*EGILLV
Trigger: GACAAGTAAGATACCCTCCAACAGCAAATTCAATGA...CTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACGGAGGAAGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CGTCTCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTTTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: RLTRSFSEREDLSEDRPVFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...AACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGAGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCACTTCAGTTTCTCTGCTaGGCTGTCTATCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSLQFLC*AVYHSL
Trigger: CAGCGAGTGATAGACAGCCAAGCAGAGAAACTGAAG...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACCTTCAGTTTCTCTGCTaGGCTGTCTATCACTCGCTG +
Preference number: 5 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHLQFLC*AVYHSL
Trigger: CAGCGAGTGATAGACAGCCAAGCAGAGAAACTGAAG...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACCTGTACATTTTGGACTaGAAGAGCTCAGCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNLYILD*KSSAGP
Trigger: CGGCCCTGCTGAGCTCTTCAAGTCCAAAATGTACAG...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGGACACGCTGTACATTTaGGACTTGAAGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQDTLYI*DLKSSA
Trigger: TGCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTC...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp GAGGGCCCTTGTAGAGACAAAGATCTAGTGGTGGAGAGAAAAGTCTGGTTAAACAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: EGPCRDKDLVVERKVWLNKGRIS*SSSFSF
Trigger: GAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTT...GTTTAACCAGACTTTTCTCTCCACCACTAGATCTTTGTCTCTACAAGGGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTCTGAGGGGACTAAGTaGTCAAATCCAGTCATCACC +
Preference number: 5 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQSEGTK*SNPVIT
Trigger: GGTGATGACTGGATTTGACAACTTAGTCCCCTCAGA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp CCTTCTCCACGTGGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATGGAAGTTCTTCAAAATGGCAATCAT +
Preference number: 5 (lower is better)
Translates to: PSPRGLAGLSSRPFL*SQDAHMEVLQNGNH
Trigger: ATGATTGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACGTGGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGAATGGTCGTTTAAGGACCCATCCAGACTCCCCTTCCTTTGTCCAACATCACTTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: QNGRLRTHPDSPSFVQHHFLVTS*FRDKNW
Trigger: CCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAA...GTGATGTTGGACAAAGGAAGGGGAGTCTGGATGGGTCCTTAAACGACCATTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TCACAAGGTCCTTTTCTGAGCGCGAGGACCTCAGTGAAGACAGACCGGTTCAAATTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: SQGPFLSARTSVKTDRFKFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...TTTGAACCGGTCTGTCTTCACTGAGGTCCTCGCGCTCAGAAAAGGACCTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TCAGTTGGTTTCTGTAAAGTACTGAGCAGCTCTGTCCTGCTGGGAGTCTGGTCAAGGAAGTCAGGCATGTaGCTAACTCACAGTAACAAC +
Preference number: 5 (lower is better)
Translates to: SVGFCKVLSSSVLLGVWSRKSGM*LTHSNN
Trigger: GTTGTTACTGTGAGTTAGCAACATGCCTGACTTCCT...TGACCAGACTCCCAGCAGGACAGAGCTGCTCAGTACTTTACAGAAACCAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATGGCACTTCTCACACTaGTACTTGTCCTCCACGGTC +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTWHFSH*YLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCATTTAACGATGCTCTCTaGACACGCTGTACATTTTGG +
Preference number: 5 (lower is better)
Translates to: FHSATRKPARMWSGPYAAFNDAL*TRCTFW
Trigger: CCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAA...TGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp TTTTTCTACACTTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: FFYTFILQQGNLHECGAGLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...GCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAAGTGTAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATGCTGGAATGTGACGTaGGCATGGTCGACATCCATG +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTCWNVT*AWSTSM
Trigger: CATGGATGTCGACCATGCCAACGTCACATTCCAGCA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCCAGACTCCCCTTCCTTaGTCCAACATCACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCQTPLP*SNITSG
Trigger: GCCAGAGGTGATGTTGGACAAAGGAAGGGGAGTCTG...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 90 bp AATGCACCAGCAGATGTCCCAGCATTAACTGCTCTGCACAACCTCTaGTTTCATTCCGACAATAGATCTGAAGAGCCAGAATTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: NAPADVPALTALHNL*FHSDNRSEEPEFLS
Trigger: AGAGAGAAATTCTGGCTCTTCAGATCTATTGTCGGAATGAAAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACATCTGCTGGTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000560371.5
CDS-3UTR CAA 90 bp TTTCATTCTGCAACAAGGAAACCTGCACGAATGTGGAGCGGGCCATATGCAGCAGCCAGAATTTCTCTCTaGCAGCAATTATCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: FHSATRKPARMWSGPYAAARISL*QQLSLN
Trigger: GTTTAAGGATAATTGCTGCAAGAGAGAAATTCTGGC...TGCTGCATATGGCCCGCTCCACATTCGTGCAGGTTTCCTTGTTGCAGAATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS-3UTR CAA 90 bp CAGAATCCAAACACCTACAGGATTTTGTTTAGAACTCCAAAGTTCAACGGATGCCTGTTCAACTGGCTGTaGTGGCATCGAAGGGACACA +
Preference number: 5 (lower is better)
Translates to: QNPNTYRILFRTPKFNGCLFNWL*WHRRDT
Trigger: TGTGTCCCTTCGATGCCACAACAGCCAGTTGAACAG...GCATCCGTTGAACTTTGGAGTTCTAAACAAAATCCTGTAGGTGTTTGGATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS CCA 90 bp GATTCTGACCTGCTCTGGGACCTTAACCAAGTGGCATCACTTCTTTaGGCCTCATTTTCCTCATATCAGCAAGAATTGTTGTCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: DSDLLWDLNQVASLL*ASFSSYQQELLSFS
Trigger: AGAGAAAGACAACAATTCTTGCTGATATGAGGAAAATGAGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAGGTCAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560463.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACACTCAAGACCTTTTCTTaGCAGTCAGGACGCACACAT +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTLKTFS*QSGRTH
Trigger: ATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAG...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp CTCAGAACAGAGACCCCGATACAACCAAACACAAAGACAAAGCGCGTGACACAGTTTCCAATTAAGTCATaGAATTTGCTGTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: LRTETPIQPNTKTKRVTQFPIKS*NLLLEG
Trigger: ACCCTCCAACAGCAAATTCAATGACTTAATTGGAAA...CTGTGTCACGCGCTTTGTCTTTGTGTTTGGTTGTATCGGGGTCTCTGTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTFLVTS*FRDKNW
Trigger: CCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACAGGACATCATGCCAGCTaGTGTGTTTTCCAATTAAGT +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTGHHAS*CVFQLS
Trigger: ACTTAATTGGAAAACACACAAGCTGGCATGATGTCC...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATGGTCACAAAATCACTaGGACTGTCAAGATGTGTCT +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTWSQNH*DCQDVS
Trigger: AGACACATCTTGACAGTCCAAGTGATTTTGTGACCA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS-3UTR CAA 90 bp TGTCAAGATGTGTCTTCACAGCAAGCGGCTACTACAGACGCAACTTTTAAAACATCATTGAATTTGCTGTaGGAGGGTATCTTACTTGTC +
Preference number: 5 (lower is better)
Translates to: CQDVSSQQAATTDATFKTSLNLL*EGILLV
Trigger: GACAAGTAAGATACCCTCCAACAGCAAATTCAATGA...TGTTTTAAAAGTTGCGTCTGTAGTAGCCGCTTGCTGTGAAGACACATCTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560371.5
CDS GCA 72 bp CTCAGCAGGGCCGCCATGCAGCTCTCGCAGAAGCGGTaGCCACACTCGGTCTGCTTCGGGCTGCACAGCACC +
Preference number: 6 (lower is better)
Translates to: LSRAAMQLSQKR*PHSVCFGLHST
Trigger: GGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGGGCACCGCTTCTGCGAGAGCTGCATGGCGGCCCTGCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS CAA 90 bp TGGGACTCCAGCAGGCCTGTGTTCCGAGCCACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCGGTCACGCGGTTCTGGAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: WDSSRPVFRATCPAL*STLSSSVTRFWRDS
Trigger: GGAGTCCCTCCAGAACCGCGTGACCGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACAGGCCTGCTGGAGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS CCA 72 bp AGCAGGTTGACGTGCTGCACGGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTTGTCCCCTGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: SRLTCCTAELAS*ALICWFVPCSA
Trigger: CGCGCTGCAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS CAA 72 bp AGCAGGCCTGTGTTCCGAGCCACTTGCCCCGCGCTCTaGTCCACGCTCTCCAGCTCGGTCACGCGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: SRPVFRATCPAL*STLSSSVTRFW
Trigger: CCAGAACCGCGTGACCGAGCTGGAGAGCGTGGACAAGAGCGCGGGGCAAGTGGCTCGGAACACAGGCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS TCA 72 bp CCCTCGCTCCTCAGGAGAGTCTGGACGCTGCACTTGTaGGGGCAGGACACCACCACGCAGGGACAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: PSLLRRVWTLHL*GQDTTTQGQSV
Trigger: CACCGACTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS GCA 72 bp TGCTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTaGTGGTTTGTCCCCTCGCTCCTCAGGAGAGTCTGG +
Preference number: 6 (lower is better)
Translates to: CCTAELASWALI*WFVPSLLRRVW
Trigger: CCAGACTCTCCTGAGGAGCGAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS GCA 72 bp TGCTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTaGTGGTTTGTCCCCTGCAGCGCGATCATCGGAACC +
Preference number: 6 (lower is better)
Translates to: CCTAELASWALI*WFVPCSAIIGT
Trigger: GGTTCCGATGATCGCGCTGCAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS CCA 72 bp AGCAGGTTGACGTGCTGCACGGCGGAGCTGGCCTCGTaGGCCTTGATCTGCTGGTTTGTCCCCTCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SRLTCCTAELAS*ALICWFVPSLL
Trigger: GAGGAGCGAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS GCA 72 bp GGTTTGTCCCCTCGCTCCTCAGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACACCACCACGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: GLSPRSSGESGR*TCEGRTPPRRD
Trigger: GTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGGGGACAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000351691.9
CDS GCA 72 bp AGCGAGTTGCTCCACTCCTTCAGCAGGTTGACGTGCTaGACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGC +
Preference number: 6 (lower is better)
Translates to: SELLHSFSRLTC*TAELASWALIC
Trigger: GCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp TCGAGCGAGTTGCTCCACTCCTTCAGCAGGTTGACGTaGTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATC +
Preference number: 6 (lower is better)
Translates to: SSELLHSFSRLT*CTAELASWALI
Trigger: GATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000559734.1
ENST00000560371.5
CDS CAA 72 bp TTGACGTGCTGCACGGCGGAGCTGGCCTCGTGGGCCTaGATCTGCTGGTTTGTCCCCTGCAGCGCGATCATC +
Preference number: 6 (lower is better)
Translates to: LTCCTAELASWA*ICWFVPCSAII
Trigger: GATGATCGCGCTGCAGGGGACAAACCAGCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS TCA 72 bp TCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTTaGCGTGCTGCACGGCGGAGCTGGCCTCGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SFRASCSTPSAG*RAARRSWPRGP
Trigger: AGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000559734.1
ENST00000560371.5
CDS TCA 72 bp AACTCGCTCCTCAGGAGAGTCTGGACGCTGCACTTGTaGGGGCAGGACACCACCACGCAGGGACAGTCGGTG +
Preference number: 6 (lower is better)
Translates to: NSLLRRVWTLHL*GQDTTTQGQSV
Trigger: CACCGACTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS TCA 72 bp GGGAGGACCCGCACCTGCAGCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCATGTGGCTTCCCGGTAT +
Preference number: 6 (lower is better)
Translates to: GRTRTCSAIIGT*LLQWLHVASRY
Trigger: ATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTGCGGGTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558880.1
CDS GCA 72 bp GGGACAAAAACTGGCGTCCCAGCACTGCGGTCAGTGTaGAGCTTTAGCGGCGGGTTAGTCTGCAGCGCGCCA +
Preference number: 6 (lower is better)
Translates to: GTKTGVPALRSV*SFSGGLVCSAP
Trigger: TGGCGCGCTGCAGACTAACCCGCCGCTAAAGCTGCACACTGACCGCAGTGCTGGGACGCCAGTTTTTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS GCA 72 bp TCACGCGGTTCTGGAGGGACTCCACGCTGCTCTTCATaGTGTCTGCTTCCTCCCAGTTCTGCCGGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: SRGSGGTPRCSS*CLLPPSSAGRA
Trigger: GGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp GTGCACTCAACTCGCTCCTCAGGAGAGTCTGGACGCTaGACTTGTGAGGGCAGGACACCACCACGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: VHSTRSSGESGR*TCEGRTPPRRD
Trigger: GTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGCGTCCAGACTCTCCTGAGGAGCGAGTTGAGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS CCA 72 bp TCGTGCACACTCAGCATCTGGTCATGCCGGCTCAGCTaGGACTCCAGCAGGCCTGTGTTCCGAGCCACTTGC +
Preference number: 6 (lower is better)
Translates to: SCTLSIWSCRLS*DSSRPVFRATC
Trigger: GCAAGTGGCTCGGAACACAGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCACGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS CCA 72 bp ATGTCGGCTAGGCGGATGTCGTGCACACTCAGCATCTaGTCATGCCGGCTCAGCTGGGACTCCAGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: MSARRMSCTLSI*SCRLSWDSSRP
Trigger: AGGCCTGCTGGAGTCCCAGCTGAGCCGGCATGACCAGATGCTGAGTGTGCACGACATCCGCCTAGCCGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS CAA 72 bp TTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAGCTGGCCTCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: FFSSELLHSFSR*TCCTAELASWA
Trigger: GGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp GTTCTGGAGGGACTCCACGCTGCTCTTCATGCTGTCTaGTTCCTCCCAGTTCTGCCGGAAGGGCCGGATCTC +
Preference number: 6 (lower is better)
Translates to: VLEGLHAALHAV*FLPVLPEGPDL
Trigger: GAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS CCA 72 bp CTCTTGTCCACGCTCTCCAGCTCGGTCACGCGGTTCTaGAGGGACTCCACGCTGCTCTTCATGCTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: LLSTLSSSVTRF*RDSTLLFMLSA
Trigger: AGCAGACAGCATGAAGAGCAGCGTGGAGTCCCTCCAGAACCGCGTGACCGAGCTGGAGAGCGTGGACAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp CCCGCACCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACG +
Preference number: 6 (lower is better)
Translates to: PAPAARSSEPDS*SGCMWLPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558880.1
CDS CCA 72 bp CCACACTCGGTCTGCTTCGGGCTGCACAGCACCAGGTaGCACTTCTCACACTTGTACTTGTCCTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: PHSVCFGLHSTR*HFSHLYLSSTV
Trigger: GACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAGCCCGAAGCAGACCGAGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS CAA 90 bp AAGGAAACCTTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGC +
Preference number: 6 (lower is better)
Translates to: KETFFSSELLHSFSR*TCCTAELASWALIC
Trigger: GCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGTTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000559734.1
ENST00000560371.5
CDS CAA 90 bp TCATATCCCTTCTTTTCGAGCGAGTTGCTCCACTCCTTCAGCAGGTaGACGTGCTGCACGGCGGAGCTGGCCTCGTGGGCCTTGATCTGC +
Preference number: 6 (lower is better)
Translates to: SYPFFSSELLHSFSR*TCCTAELASWALIC
Trigger: GCAGATCAAGGCCCACGAGGCCAGCTCCGCCGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGGATATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS TCA 72 bp CCTGCTTCCGCCGCTTGTAGTCGCGAATCTTCCAGATaGGCACTCCATTGTAGCTGGCGGTCTCCAGGACCT +
Preference number: 6 (lower is better)
Translates to: PASAACSRESSR*ALHCSWRSPGP
Trigger: AGGTCCTGGAGACCGCCAGCTACAATGGAGTGCTCATCTGGAAGATTCGCGACTACAAGCGGCGGAAGCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS TCA 72 bp TGCTGGTTTGTCCCCTGCAGCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCATGTGGCTTCCCGGTAT +
Preference number: 6 (lower is better)
Translates to: CWFVPCSAIIGT*LLQWLHVASRY
Trigger: ATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGGGACAAACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS GCA 72 bp CTGCGGTCAGTGTGCAGCTTTAGCGGCGGGTTAGTCTaGAGCGCGCCAGGAGAGTCCATCTTTTTACTCGAC +
Preference number: 6 (lower is better)
Translates to: LRSVCSFSGGLV*SAPGESIFLLD
Trigger: GTCGAGTAAAAAGATGGACTCTCCTGGCGCGCTGCAGACTAACCCGCCGCTAAAGCTGCACACTGACCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS TCA 72 bp GATGTCAGCTGCTGTAGTCCCAGCTACTTGGGAGGCTaGGGCAGGAGAATCTCTCGAACCTGGGAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: DVSCCSPSYLGG*GRRISRTWEAE
Trigger: TTCTGCCTCCCAGGTTCGAGAGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGCAGCTGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560463.5
CDS GCA 72 bp GCAGCGCGATCATCGGAACCTGACTCTTGCAGTGGCTaGATGTGGCTTCCCGGTATTTACACGCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: AARSSEPDSCSG*MWLPGIYTPSP
Trigger: TGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp TTGTCCCCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACG +
Preference number: 6 (lower is better)
Translates to: LSPAARSSEPDS*SGCMWLPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559734.1
CDS CCA 72 bp CTGCTCTGGGACCTTAACCAAGTGGCATCACTTCTTTaGGCCTCATTTTCCTCATCTCGCGGTCCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: LLWDLNQVASLL*ASFSSSRGPSP
Trigger: CGGCGACGGACCGCGAGATGAGGAAAATGAGGCCCAAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347662.8
ENST00000392745.8
CDS CAA 90 bp ATGCTGTCTGCTTCCTCCCAGTTCTGCCGGAAGGGCCGGATCTCCTaGTCAAGCTCCTTCAGTTTCTCTGCTTGGCTGTCTATCACTCGC +
Preference number: 6 (lower is better)
Translates to: MLSASSQFCRKGRIS*SSSFSFSAWLSITR
Trigger: GCGAGTGATAGACAGCCAAGCAGAGAAACTGAAGGAGCTTGACAAGGAGATCCGGCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000559734.1
ENST00000560371.5
CDS TCA 72 bp GTGTCTTCGTGTTTCTGCAGCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCATGTGGCTTCCCGGTAT +
Preference number: 6 (lower is better)
Translates to: VSSCFCSAIIGT*LLQWLHVASRY
Trigger: ATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGAAACACGAAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS TCA 72 bp TGCAACAAGGAAACCTGCAGCGCGATCATCGGAACCTaGCTCTTGCAGTGGCTGCATGTGGCTTCCCGGTAT +
Preference number: 6 (lower is better)
Translates to: CNKETCSAIIGT*LLQWLHVASRY
Trigger: ATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTTTCCTTGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS GCA 72 bp CGTGTTTCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACG +
Preference number: 6 (lower is better)
Translates to: RVSAARSSEPDS*SGCMWLPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGAAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS GCA 72 bp AGGAAACCTGCAGCGCGATCATCGGAACCTGACTCTTaGAGTGGCTGCATGTGGCTTCCCGGTATTTACACG +
Preference number: 6 (lower is better)
Translates to: RKPAARSSEPDS*SGCMWLPGIYT
Trigger: CGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCGCGCTGCAGGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539721.5
CDS CCA 72 bp CGATCATCGGAACCTGACTCTTGCAGTGGCTGCATGTaGCTTCCCGGTATTTACACGCCTTCTCCACGTGGT +
Preference number: 6 (lower is better)
Translates to: RSSEPDSCSGCM*LPGIYTPSPRG
Trigger: ACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATGCAGCCACTGCAAGAGTCAGGTTCCGATGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS CAA 72 bp TTCGGGCTGCACAGCACCAGGTGGCACTTCTCACACTaGTACTTGTCCTCCACGGTCTTCACAAACTTTTCC +
Preference number: 6 (lower is better)
Translates to: FGLHSTRWHFSH*YLSSTVFTNFS
Trigger: GGAAAAGTTTGTGAAGACCGTGGAGGACAAGTACAAGTGTGAGAAGTGCCACCTGGTGCTGTGCAGCCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS CAA 90 bp GTACTTGTCCTCCACGGTCTTCACAAACTTTTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGGCGTCCCAGCACTGCGGTCAGTGTG +
Preference number: 6 (lower is better)
Translates to: VLVLHGLHKLFLVTS*FRDKNWRPSTAVSV
Trigger: CACACTGACCGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAAAAGTTTGTGAAGACCGTGGAGGACAAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS TCA 72 bp CTTAAAACTACAGGTGCTGGGGGCATTGACACACTCTaGCAAGTGTGCACTCAACTCGCTCCTCAGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LKTTGAGGIDTL*QVCTQLAPQES
Trigger: ACTCTCCTGAGGAGCGAGTTGAGTGCACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCTGTAGTTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392745.8
ENST00000558700.5
ENST00000560371.5
CDS GCA 72 bp AGTGAAGACAGACCGGTTCAAATCCCCCAGAGGAGTTaGCTTCTGCTAAATCCACCTCCCCAGCTACTTATC +
Preference number: 6 (lower is better)
Translates to: SEDRPVQIPQRS*LLLNPPPQLLI
Trigger: GATAAGTAGCTGGGGAGGTGGATTTAGCAGAAGGCAACTCCTCTGGGGGATTTGAACCGGTCTGTCTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
CDS CCA 72 bp CATGTGGCTTCCCGGTATTTACACGCCTTCTCCACGTaGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: HVASRYLHAFST*SRRSFLKTFSL
Trigger: CAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACGTGGAGAAGGCGTGTAAATACCGGGAAGCCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS CAA 72 bp CTCCACGGTCTTCACAAACTTTTCCTTGTAACCTCCTaGTTCAGGGACAAAAACTGGCGTCCCAGCACTGCG +
Preference number: 6 (lower is better)
Translates to: LHGLHKLFLVTS*FRDKNWRPSTA
Trigger: CGCAGTGCTGGGACGCCAGTTTTTGTCCCTGAACAAGGAGGTTACAAGGAAAAGTTTGTGAAGACCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5
ENST00000560463.5
CDS CAA 72 bp TCATTCTGCAACAAGGAAACCTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGGTTGACGTGCTGCACG +
Preference number: 6 (lower is better)
Translates to: SFCNKETFFSSE*LHSFSRLTCCT
Trigger: CGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGTTTCCTTGTTGCAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp GGAGCCAGGTTTCTGATCCTAGGTCTGATTCTGACCTaGTCTGGGACCTTAACCAAGTGGCATCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: GARFLILGLILT*SGTLTKWHHFF
Trigger: AAAGAAGTGATGCCACTTGGTTAAGGTCCCAGAGCAGGTCAGAATCAGACCTAGGATCAGAAACCTGGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347662.8
ENST00000392745.8
ENST00000560463.5
CDS CAA 72 bp GACTCTTTATTCTCATATCCCTTCTTTTCGAGCGAGTaGCTCCACTCCTTCAGCAGGTTGACGTGCTGCACG +
Preference number: 6 (lower is better)
Translates to: DSLFSYPFFSSE*LHSFSRLTCCT
Trigger: CGTGCAGCACGTCAACCTGCTGAAGGAGTGGAGCAACTCGCTCGAAAAGAAGGGATATGAGAATAAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558700.5
CDS CAA 90 bp GCCTTCTCCACGTGGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACATGGAAGTTCTTCAAAATGGCAATCA +
Preference number: 6 (lower is better)
Translates to: AFSTWSRRSFLKTFS*QSGRTHGSSSKWQS
Trigger: TGATTGCCATTTTGAAGAACTTCCATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACGTGGAGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS GCA 72 bp GCAGATGTCCCAGCATTAACTGCTCTGCACAACCTCTaGTTTCATTCCGACAATAGATCTGAAGAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: ADVPALTALHNL*FHSDNRSEEPE
Trigger: TTCTGGCTCTTCAGATCTATTGTCGGAATGAAAGCAGAGGTTGTGCAGAGCAGTTAATGCTGGGACATCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000560371.5
CDS GCA 72 bp CGTGGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTTaGAGTCAGGACGCACACATGGAAGTTCTTCAAAAT +
Preference number: 6 (lower is better)
Translates to: RGLAGLSSRPFL*SQDAHMEVLQN
Trigger: ATTTTGAAGAACTTCCATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS CAA 72 bp ACGTGGTCTCGCAGGTCTTTCCTCAAGACCTTTTCTTaGCAGTCAGGACGCACACATGGAAGTTCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: TWSRRSFLKTFS*QSGRTHGSSSK
Trigger: TTTTGAAGAACTTCCATGTGTGCGTCCTGACTGCAAAGAAAAGGTCTTGAGGAAAGACCTGCGAGACCACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000558700.5
ENST00000558880.1
ENST00000559734.1
ENST00000560371.5
CDS CAA 90 bp TTGGGCCTCATTTTCCTCATATCAGCAAGAATTGTTGTCTTTCTCTaGATTCTCTCAGGTTCCTCAATTTATAGGATCACTGAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: LGLIFLISARIVVFL*ILSGSSIYRITEAS
Trigger: TGAAGCCTCAGTGATCCTATAAATTGAGGAACCTGAGAGAATCAAGAGAAAGACAACAATTCTTGCTGATATGAGGAAAATGAGGCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560463.5
CDS TCA 72 bp TTATCCTTAAACACCTTATCTTTAACGATGCTCTCTTaGCACGCTGTACATTTTGGACTTGAAGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: LSLNTLSLTMLS*HAVHFGLEELS
Trigger: GCTGAGCTCTTCAAGTCCAAAATGTACAGCGTGTCAAGAGAGCATCGTTAAAGATAAGGTGTTTAAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347662.8
ENST00000351691.9
ENST00000392745.8
ENST00000539721.5
ENST00000560371.5