RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRAF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000056558

Ensembl transcript IDs: ENST00000373887.8, ENST00000540010.1, ENST00000546084.5

Found 754 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGTCCGTaGAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTTTGCC +
Preference number: 1 (lower is better)
Translates to: SGPEWLTGLPVSHGP*RGEQLCLSPSGPFA
Trigger: GGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp ACTGGCCTCCCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCCTTTGCCTTTGTGGGCCCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: TGLPVSHGPCRGEQL*LSPSGPFAFVGPAH
Trigger: GTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp GAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCG +
Preference number: 1 (lower is better)
Translates to: EGSSSACLLLDPLPL*AQPTSCHPNQMASP
Trigger: CGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp TCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACC +
Preference number: 1 (lower is better)
Translates to: STFGAGVAHWPPSVA*SVQRGAALPVSFWT
Trigger: GGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp GTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTaGACCCTTTGCCTTTGTGGGCCCAGCCCACGTCCTGCCATCCTA +
Preference number: 1 (lower is better)
Translates to: VAWSVQRGAALPVSF*TLCLCGPSPRPAIL
Trigger: TAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp TCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCACGTCCTGCCATCCTAACCAGATGG +
Preference number: 1 (lower is better)
Translates to: SVQRGAALPVSFWTL*LCGPSPRPAILTRW
Trigger: CCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp GAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTGGGGAAGCTGAGCTGCCAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: EVTWCLADGGTGCGG*VCSCVLGKLSCQAQ
Trigger: CTGGGCCTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACACCCAGCCCCCACATCCTGTGCCTCCATCAGCTAAACACCACGTCACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp TGTCTCCTTCTGGACCCTTTGCCTTTGTGGGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAGTCT +
Preference number: 1 (lower is better)
Translates to: CLLLDPLPLWAQPTS*HPNQMASPKSTPQS
Trigger: AGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp CTTTGCCTTTGTGGGCCCAGCCCACGTCCTGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCCCTCAGTCTTGCTTGGATCATGCCA +
Preference number: 1 (lower is better)
Translates to: LCLCGPSPRPAILTR*PARSRPLSLAWIMP
Trigger: TGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp TTCTTCTCATTTGGTGAGAGTCCACCTCAACATTCGGGGCCGGAGTaGCTCACTGGCCTCCCAGTGTCGCATGGTCCGTGCAGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: FFSFGESPPQHSGPE*LTGLPVSHGPCRGE
Trigger: CTCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGACTCTCACCAAATGAGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp AAGATAGGTGTGGGCCACCACCAGGCCATGACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTTT +
Preference number: 1 (lower is better)
Translates to: KIGVGHHQAMTGGQY*PGFSLQSVLRGISF
Trigger: AAAGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATGGCCTGGTGGTGGCCCACACCTATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTaGCACGATGCTCCGTCACCTCCTTTGATCCTCCTGTATGCTGGG +
Preference number: 1 (lower is better)
Translates to: LRAQLAWVSDPLRLP*HDAPSPPLILLYAG
Trigger: CCCAGCATACAGGAGGATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp GCTTGGATCATGCCAGCCTTCACCCATCTTTGTGCCCTGAGGTCTTaGGTGCCAAGGGCAGGGCATCACAGTCCTCTGGCTAGCTCCCTT +
Preference number: 1 (lower is better)
Translates to: AWIMPAFTHLCALRS*VPRAGHHSPLASSL
Trigger: AAGGGAGCTAGCCAGAGGACTGTGATGCCCTGCCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp TCTGACCCTGGAGAAAAAGAGAGCAGGCCTGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: SDPGEKESRPVSRSP*RPCRDLPSPRASLL
Trigger: AAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACACAGGCCTGCTCTCTTTTTCTCCAGGGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp ACCCCTCAGTCTTGCTTGGATCATGCCAGCCTTCACCCATCTTTGTaGCCTGAGGTCTTGGGTGCCAAGGGCAGGGCATCACAGTCCTCT +
Preference number: 1 (lower is better)
Translates to: TPQSCLDHASLHPSL*PEVLGAKGRASQSS
Trigger: AGAGGACTGTGATGCCCTGCCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp TGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTTCACCCATCTTTGTGCCCTGAGGTC +
Preference number: 1 (lower is better)
Translates to: CHPNQMASPKSTPQS*LDHASLHPSLCPEV
Trigger: GACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp ACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGCACAGGATGTGGGGGCTGGGTGTGC +
Preference number: 1 (lower is better)
Translates to: TWELTVTGFHLHEVT*CLADGGTGCGGWVC
Trigger: GCACACCCAGCCCCCACATCCTGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp TCAGTCTTGCTTGGATCATGCCAGCCTTCACCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGGCAGGGCATCACAGTCCTCTGGCTA +
Preference number: 1 (lower is better)
Translates to: SVLLGSCQPSPIFVP*GLGCQGQGITVLWL
Trigger: TAGCCAGAGGACTGTGATGCCCTGCCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp GGGGCCTCTAGGCAGGAAGAGGAAAGTTTATGCCCCTCTTCTTCTTaGGGTGCCTCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTT +
Preference number: 1 (lower is better)
Translates to: GASRQEEESLCPSSS*GASGCTWELTVTGF
Trigger: AAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCATAAACTTTCCTCTTCCTGCCTAGAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp CTCCCTGGCGGCCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTaGTTGGGTCCTACGGTTCCAAGCCTGGTTCCATTTTCTTCTCAT +
Preference number: 1 (lower is better)
Translates to: LPGGPAEIFLARELL*LGPTVPSLVPFSSH
Trigger: ATGAGAAGAAAATGGAACCAGGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 90 bp TCATGTGTGACATCCAGCTGTCAGCAGGAAGAAGTCAGTCTCCACTaGCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAAT +
Preference number: 1 (lower is better)
Translates to: SCVTSSCQQEEVSLH*LHSLRCHAVSRGNN
Trigger: ATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAGACTGACTTCTTCCTGCTGACAGCTGGATGTCACACATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp ATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACCCATCTTTGTGCCCTGAGGTCTTGG +
Preference number: 1 (lower is better)
Translates to: ILTRWPARSRPLSLA*IMPAFTHLCALRSW
Trigger: CCAAGACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp TGGGTCCTACGGTTCCAAGCCTGGTTCCATTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCT +
Preference number: 1 (lower is better)
Translates to: WVLRFQAWFHFLLIW*ESTSTFGAGVAHWP
Trigger: AGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGGAACCAGGCTTGGAACCGTAGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp TTTCAGGGCCTAGACCCATCACTCGCTAGGCCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGGAAGAAGTCAGTCTCCACTGCCTCC +
Preference number: 1 (lower is better)
Translates to: FQGLDPSLARPDLHV*HPAVSRKKSVSTAS
Trigger: GGAGGCAGTGGAGACTGACTTCTTCCTGCTGACAGCTGGATGTCACACATGAAGGTCTGGCCTAGCGAGTGATGGGTCTAGGCCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp AAGAGTAAGCTGTCAGGAAAGCAGCAGGGGAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAAGG +
Preference number: 1 (lower is better)
Translates to: KSKLSGKQQGRVVGS*LVSGSLESWVWPPR
Trigger: CCTTGGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACTCTCCCCTGCTGCTTTCCTGACAGCTTACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp AAGCTCCTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTaGGCCAGGAGGCCTAGAATGAGAGACTTTCTGGGCTGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: KLLNVSRTPVALGLT*ARRPRMRDFLGWKE
Trigger: TTCCTTCCAGCCCAGAAAGTCTCTCATTCTAGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAGGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp AACCCTAACGATTTGAGCAATGGAGTCTGGCACAGGCTCAGCAGGTaGAGGAAGAGTAAGCTGTCAGGAAAGCAGCAGGGGAGAGTAGTA +
Preference number: 1 (lower is better)
Translates to: NPNDLSNGVWHRLSR*RKSKLSGKQQGRVV
Trigger: TACTACTCTCCCCTGCTGCTTTCCTGACAGCTTACTCTTCCTCCACCTGCTGAGCCTGTGCCAGACTCCATTGCTCAAATCGTTAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp CTGATGCCACCTGCAAAACTGGTGGCACCACCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACCATA +
Preference number: 1 (lower is better)
Translates to: LMPPAKLVAPPQTQQ*PFQTWLSTNNSQTI
Trigger: TATGGTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTGGCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp TGGGCTGGAAGGAAACTTAAAAGTCTTCAAATCCAACCCCCAATTTaGAGTCCTAGTGGAGCCGTCTGGGTTTGCTTGTTCACCTCCAAT +
Preference number: 1 (lower is better)
Translates to: WAGRKLKSLQIQPPI*SPSGAVWVCLFTSN
Trigger: ATTGGAGGTGAACAAGCAAACCCAGACGGCTCCACTAGGACTTCAAATTGGGGGTTGGATTTGAAGACTTTTAAGTTTCCTTCCAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 90 bp AAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCCCAAACCATACACTTTAGGAAAACT +
Preference number: 1 (lower is better)
Translates to: KLVAPPQTQQWPFQT*LSTNNSQTIHFRKT
Trigger: AGTTTTCCTAAAGTGTATGGTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 90 bp CTACTCTCAATCATAATGATCTACTTATCTGCTCATTTCCTCCACTaGACTAAGAGTTTCTTGAGTCCAGAGTGCACATCTTGCCTTTCT +
Preference number: 1 (lower is better)
Translates to: LLSIIMIYLSAHFLH*TKSFLSPECTSCLS
Trigger: AGAAAGGCAAGATGTGCACTCTGGACTCAAGAAACTCTTAGTTCAGTGGAGGAAATGAGCAGATAAGTAGATCATTATGATTGAGAGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: PSPRPAILTRWPARSRPLPIFVP*GLGCQG
Trigger: CCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGC +
Preference number: 2 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWDPLPL*AQPTSC
Trigger: GCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp GCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: AEGSSSACLLLDPLP*WAQPTSCHPNQMAS
Trigger: GCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCC +
Preference number: 2 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWRGEQL*LSPSGP
Trigger: GGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCT...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTGGGGAAGCTGAGCTaGCAGGCCCAGGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTLGKLS*QAQGGR
Trigger: CCTGCCACCCTGGGCCTGGCAGCTCAGCTTCCCCAA...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGCGTGTTGGGGAAGCTaGGCTGCCAGGCCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTACWGS*AARPRV
Trigger: CACCCTGGGCCTGGCAGCTCAGCTTCCCCAACACGC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGCGTGGCATCTCCTTTaGGGGTCAGAGAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCAWHLL*GSEKPG
Trigger: CCCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCC +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTAQPTS*HPNQMA
Trigger: GGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGTGTCGCATGGTCCGTaGAGAGGGGAGCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTVSHGP*RGEQLC
Trigger: GCAGAGCTGCTCCCCTCTGCACGGACCATGCGACAC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTCTCCCTGGCGGCCCTaGAGAGATCTTCCTAGCCCG +
Preference number: 2 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWSPWRP*RDLPSP
Trigger: CGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAGA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTTGGGGAAGCTGAGCTaGCAGGCCCAGGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPLGKLS*QAQGGR
Trigger: CCTGCCACCCTGGGCCTGGCAGCTCAGCTTCCCCAA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCATTCGGGGCCGGAGTaGCTCACTGGCCTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPHSGPE*LTGLPV
Trigger: CACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCC +
Preference number: 2 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSAQPTS*HPNQMA
Trigger: GGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: AGSIAQASLSSLSCVASPSSLLS*SSLRSP
Trigger: GGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCT...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCC +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTAILTR*PARSRP
Trigger: GGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKDPLPL*AQPTSC
Trigger: GCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 2 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp CAGGATGCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATaGAGACTGCCGTGCCACGATGCTCCGTCACCTCCTTTGATCCTC +
Preference number: 2 (lower is better)
Translates to: QDARLRAQLAWVSDP*RLPCHDAPSPPLIL
Trigger: GAGGATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGCATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTTGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: AGSIAQASLSSLSCVASPWLAPF*VGAPSG
Trigger: TCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCA...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCCTGGGAGCTCACAGTaGCTGGGTTTCACCTGCATG +
Preference number: 2 (lower is better)
Translates to: AGSIAQASLSSLSCVASPPGSSQ*LGFTCM
Trigger: CATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGTGTCGCATGGTCCGTaGAGAGGGGAGCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTVSHGP*RGEQLC
Trigger: GCAGAGCTGCTCCCCTCTGCACGGACCATGCGACAC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPSSLLS*SSLRSP
Trigger: GGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGPLSLA*IMPAFT
Trigger: GGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGG...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGAGAGCTTCTCTGCTTaGGTCCTACGGTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCESFSA*VLRFQA
Trigger: GGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 2 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDTGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPWLAPF*VGAPSG
Trigger: TCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCA...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCACCCGGTCCTGTTTCTaGCCCTGGAGAAAAAGAGAG +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCTRSCF*PWRKRE
Trigger: CTCTCTTTTTCTCCAGGGTCAGAAACAGGACCGGGT...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGTGTGGCCTCCAAGGTaGGAAGATAGGTGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPVWPPR*EDRCGP
Trigger: TGGCCCACACCTATCTTCTCACCTTGGAGGCCACAC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCTCCGTCACCTCCTTTaGTCCTCCTGTATGCTGGGC +
Preference number: 2 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDLRHLL*SSCMLG
Trigger: GCCCAGCATACAGGAGGATCAAAGGAGGTGACGGAG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCCTCTGATGCCACCTaGAAAACTGGTGGCACCACC +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKASDAT*KTGGTT
Trigger: GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKTGGQY*PGFSLQ
Trigger: CTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGT...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPPPSVA*SVQRGA
Trigger: TGCTCCCCTCTGCACGGACCATGCGACACTGGGAGG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGAGAGCTTCTCTGCTTaGGTCCTACGGTTCCAAGCC +
Preference number: 2 (lower is better)
Translates to: VPASMPASDATCKTGGTTESFSA*VLRFQA
Trigger: GGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTTGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATTCTTGAGGTGCCTCTaGCTGCACCTGGGAGCTCAC +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKFLRCL*LHLGAH
Trigger: GTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGATCCTCCTGTATGCTaGGCTGGAGAGAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCDPPVC*AGENRK
Trigger: CTTCCTGTTCTCTCCAGCCCAGCATACAGGAGGATC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTAGGACAGGAAGCTCCTaGATGTTTCCAGAACCCCTG +
Preference number: 2 (lower is better)
Translates to: AGSIAQASLSSLSCVASPRTGSS*MFPEPL
Trigger: CAGGGGTTCTGGAAACATTCAGGAGCTTCCTGTCCT...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCRVVGS*LVSGSL
Trigger: CAAAGACCCTGAGACAAGTCAGGACCCTACTACTCT...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LNVSRTPVALGLTWARRPSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCC +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPRGEQL*LSPSGP
Trigger: GGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCTTTGATCCTCCTGTATaGTGGGCTGGAGAGAACAGG +
Preference number: 2 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCFDPPV*WAGENR
Trigger: CCTGTTCTCTCCAGCCCAGCATACAGGAGGATCAAA...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGGGAGGGAGGCAAGCTaGGGTGGGTCTCATTATAGA +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKGREAS*GGSHYR
Trigger: TCTATAATGAGACCCACCCCAGCTTGCCTCCCTCCC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAGAGCCCAGCTGGCCTaGGTTTCTGACCCATTGAGA +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKRAQLA*VSDPLR
Trigger: TCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCT...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp CATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCACCCATCTTTGTGCCCTGAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: HPNQMASPKSTPQSC*DHASLHPSLCPEVL
Trigger: CAAGACCTCAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGTGTCGCATGGTCCGTaGAGAGGGGAGCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTVSHGP*RGEQLC
Trigger: GCAGAGCTGCTCCCCTCTGCACGGACCATGCGACAC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACCCCAGAATGTTTGCTaGTGTCGTGCATGGACGACA +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKPQNVC*CRAWTT
Trigger: TGTCGTCCATGCACGACAGCAGCAAACATTCTGGGG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGC +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSDPLPL*AQPTSC
Trigger: GCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGACTGCATTCAAACTaGCACCCCATCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRLHSN*HPIPST
Trigger: GGTGGAAGGGATGGGGTGCCAGTTTGAATGCAGTCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTGGAGGCACAGGATGTaGGGGCTGGGTGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPWRHRM*GLGVLL
Trigger: CAGGAGCACACCCAGCCCCCACATCCTGTGCCTCCA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTGGGTTTCACCTGCATaGAGTGACGTGGTGTTTAGC +
Preference number: 2 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPWVSPA*SDVVFS
Trigger: GCTAAACACCACGTCACTTCATGCAGGTGAAACCCA...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDRVVGS*LVSGSL
Trigger: CAAAGACCCTGAGACAAGTCAGGACCCTACTACTCT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCCTCTGATCTTCAGCTaGAGGACTAAGCATGACAGG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPPLIFS*RTKHDR
Trigger: CCTGTCATGCTTAGTCCTTCAGCTGAAGATCAGAGG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTTTGGGGTTATACATTaGTCAGTGGCTTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWFGVIH*SVAWRS
Trigger: GGACCTCCAAGCCACTGAGCAATGTATAACCCCAAA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTATGTTCCTGCCAGCATaGCAGCCTCTGATGCCACCT +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPMFLPA*QPLMPP
Trigger: AGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACAT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTTTGATCCTCCTGTATaGTGGGCTGGAGAGAACAGG +
Preference number: 2 (lower is better)
Translates to: STVSAATLSAVGTIKSSPFDPPV*WAGENR
Trigger: CCTGTTCTCTCCAGCCCAGCATACAGGAGGATCAAA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp TGCTTGGGTCCTACGGTTCCAAGCCTGGTTCCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAACATTCGGGGCCGGAGTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: CLGPTVPSLVPFSSH*VRVHLNIRGRSGSL
Trigger: CAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGGAACCAGGCTTGGAACCGTAGGACCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGCGTGTTGGGGAAGCTaGGCTGCCAGGCCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNACWGS*AARPRV
Trigger: CACCCTGGGCCTGGCAGCTCAGCTTCCCCAACACGC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCAGCATGCCAGCCTCTaGTGCCACCTGCAAAACTGG +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSQHASL*CHLQNW
Trigger: CCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCCCGAGAGCTTCTCTaGTTGGGTCCTACGGTTCCA +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPARELL*LGPTVP
Trigger: TGGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCCGAGCCTGGACAGACTaGATTCAAACTGGCACCCCA +
Preference number: 2 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASRAWTD*IQTGTP
Trigger: TGGGGTGCCAGTTTGAATGCAGTCTGTCCAGGCTCG...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 2 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTGGGGAAGCTGAGCTaGCAGGCCCAGGGTGGCAGG +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLLGKLS*QAQGGR
Trigger: CCTGCCACCCTGGGCCTGGCAGCTCAGCTTCCCCAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 2 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSTGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTTCTTGAGGTGCCTCTaGCTGCACCTGGGAGCTCAC +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPFLRCL*LHLGAH
Trigger: GTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDPQTQQ*PFQTWL
Trigger: GAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCC +
Preference number: 2 (lower is better)
Translates to: WGYTLLSGLEVLISLLKERGEQL*LSPSGP
Trigger: GGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCT...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCGAGCCTGGACAGACTaGATTCAAACTGGCACCCCA +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSRAWTD*IQTGTP
Trigger: TGGGGTGCCAGTTTGAATGCAGTCTGTCCAGGCTCG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAGACTGCATTCAAACTaGCACCCCATCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASRLHSN*HPIPST
Trigger: GGTGGAAGGGATGGGGTGCCAGTTTGAATGCAGTCT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTGGAGGCACAGGATGTaGGGGCTGGGTGTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLWRHRM*GLGVLL
Trigger: CAGGAGCACACCCAGCCCCCACATCCTGTGCCTCCA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPLHEVT*CLADGG
Trigger: GCCTCCATCAGCTAAACACCACGTCACTTCATGCAG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGPIFVP*GLGCQG
Trigger: CCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 2 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGGGAGAGGCTTCCTCTaGTCTTCAGCTGAAGGACTA +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSGRGFL*SSAEGL
Trigger: TAGTCCTTCAGCTGAAGATCAGAGGAAGCCTCTCCC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLSSLLS*SSLRSP
Trigger: GGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCT...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCACCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACC +
Preference number: 2 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSPLSLA*IMPAFT
Trigger: GGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGG...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 2 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTGCCACCTGCAAAACTaGTGGCACCACCTCAAACTC +
Preference number: 2 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSCHLQN*WHHLKL
Trigger: GAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTGGCA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp AAGCAGCCCCAGAATGTTTGCTGCTGTCGTGCATGGACGACACCATaGCACATAAAAGCACTAGTGCTCCATTATTGCAGTTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: KQPQNVCCCRAWTTP*HIKALVLHYCSWAS
Trigger: GGAGGCCCAACTGCAATAATGGAGCACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGCACGACAGCAGCAAACATTCTGGGGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCTGGGAGCTCACAGTaGCTGGGTTTCACCTGCATG +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLPGSSQ*LGFTCM
Trigger: CATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCC +
Preference number: 2 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNAILTR*PARSRP
Trigger: GGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 2 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp CAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCACAGGCTCAGCAGGTGGAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: QEGLLTHFYRSNPND*SNGVWHRLSRWRKS
Trigger: ACTCTTCCTCCACCTGCTGAGCCTGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 2 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCATGGGTTTCACCTGCATaGAGTGACGTGGTGTTTAGC +
Preference number: 2 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSWVSPA*SDVVFS
Trigger: GCTAAACACCACGTCACTTCATGCAGGTGAAACCCA...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAAGACTGCATTCAAACTaGCACCCCATCCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: WGYTLLSGLEVLISLLKERLHSN*HPIPST
Trigger: GGTGGAAGGGATGGGGTGCCAGTTTGAATGCAGTCT...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAACTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: WGYTLLSGLEVLISLLKELHEVT*CLADGG
Trigger: GCCTCCATCAGCTAAACACCACGTCACTTCATGCAG...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCC +
Preference number: 2 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPWPFQT*LSTNNS
Trigger: GGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATCTCCCTGGCGGCCCTaGAGAGATCTTCCTAGCCCG +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTSPWRP*RDLPSP
Trigger: CGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAGA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTAATGATCTACTTATCTaGTCATTTCCTCCACTGAAC +
Preference number: 2 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPNDLLI*SFPPLN
Trigger: GTTCAGTGGAGGAAATGAGCAGATAAGTAGATCATT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACACCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCA +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTPPSVA*SVQRGA
Trigger: TGCTCCCCTCTGCACGGACCATGCGACACTGGGAGG...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLLHEVT*CLADGG
Trigger: GCCTCCATCAGCTAAACACCACGTCACTTCATGCAG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTTGGGGTTATACATTaGTCAGTGGCTTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLFGVIH*SVAWRS
Trigger: GGACCTCCAAGCCACTGAGCAATGTATAACCCCAAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTWLAPF*VGAPSG
Trigger: TCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAATTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 2 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCTTTGGGGTTATACATTaGTCAGTGGCTTGGAGGTCC +
Preference number: 2 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSFGVIH*SVAWRS
Trigger: GGACCTCCAAGCCACTGAGCAATGTATAACCCCAAA...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTTGGQY*PGFSLQ
Trigger: CTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTC +
Preference number: 2 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSPQTQQ*PFQTWL
Trigger: GAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGGCTTAGAGCCCAGCTaGCCTGGGTTTCTGACCCAT +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTGLEPS*PGFLTH
Trigger: ATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACACCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTPDLHV*HPAVSR
Trigger: CCTGCTGACAGCTGGATGTCACACATGAAGGTCTGG...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAATGTTCCTGCCAGCATaGCAGCCTCTGATGCCACCT +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTMFLPA*QPLMPP
Trigger: AGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACAT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACACTCTCCAGTCTGTCCTaGGTGGCATCTCCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTLSSLS*VASPLR
Trigger: CCTCAAAGGAGATGCCACGCAGGACAGACTGGAGAG...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTTATACATTGCTCAGTaGCTTGGAGGTCCTGATCAG +
Preference number: 2 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNLYIAQ*LGGPDQ
Trigger: CTGATCAGGACCTCCAAGCCACTGAGCAATGTATAA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAAGAGCCCAGCTGGCCTaGGTTTCTGACCCATTGAGA +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTRAQLA*VSDPLR
Trigger: TCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGCTTTGCTGAAAGAATaGCTGCATCTCATGCTCTTT +
Preference number: 2 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGALLKE*LHLMLF
Trigger: AAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp CTTCAATGTCGAACACAGTTAACAGGTGCAGGTGTCAATGAAGCTTaGCTGAAAGAATGGCTGCATCTCATGCTCTTTGAAGAGAGTATG +
Preference number: 2 (lower is better)
Translates to: LQCRTQLTGAGVNEA*LKEWLHLMLFEESM
Trigger: CATACTCTCTTCAAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGCTTCATTGACACCTGCACCTGTTAACTGTGTTCGACATTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 2 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGATCCTCCTGTATGCTaGGCTGGAGAGAACAGGAAG +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTDPPVC*AGENRK
Trigger: CTTCCTGTTCTCTCCAGCCCAGCATACAGGAGGATC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATTGTCTCAGGGTCTTTaGAAAGTTGGGTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTLSQGL*KVGCGL
Trigger: GAGGCCACACCCAACTTTCCAAAGACCCTGAGACAA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 90 bp AAAGAATGGCTGCATCTCATGCTCTTTGAAGAGAGTATGTATCTCTaGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGCTGTT +
Preference number: 2 (lower is better)
Translates to: KEWLHLMLFEESMYL*PSEIGNQKCRVTAV
Trigger: AACAGCTGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTCTTCAAAGAGCATGAGATGCAGCCATTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp GGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: GAGVAHWPPSVA*SVQRGAALPVS
Trigger: GGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp GTGGGCCACCACCAGGCCATGACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGC +
Preference number: 3 (lower is better)
Translates to: VGHHQAMTGGQY*PGFSLQSVLRG
Trigger: GCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATGGCCTGGTGGTGGCCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp GAGTCCACCTCAACATTCGGGGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGGTCCGTGCAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: ESTSTFGAGVAH*PPSVAWSVQRG
Trigger: TCCCCTCTGCACGGACCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp CTGGACCCTTTGCCTTTGTGGGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCCAGCCCGAAGTCGACC +
Preference number: 3 (lower is better)
Translates to: LDPLPLWAQPTS*HPNQMASPKST
Trigger: GGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp TCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTaGACCCTTTGCCTTTGTGGGCCCAGCCCACGTCCT +
Preference number: 3 (lower is better)
Translates to: SVQRGAALPVSF*TLCLCGPSPRP
Trigger: AGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGTGTGCTCCTGCGTGTaGGGGAAGCTGAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCVCSCV*GKLSCQ
Trigger: CTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACAC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: AGSIAQASLSSLSCVASPLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGTGTGCTCCTGCGTGTaGGGGAAGCTGAGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: AGSIAQASLSSLSCVASPVCSCV*GKLSCQ
Trigger: CTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACAC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCCTTTGCCTTTGTGGGC +
Preference number: 3 (lower is better)
Translates to: PVSHGPCRGEQL*LSPSGPFAFVG
Trigger: GCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCC +
Preference number: 3 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTLDPLP*WAQPTS
Trigger: GGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAAGCCTTCACCCATCTTaGTGCCCTGAGGTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGSLHPS*CPEVLG
Trigger: ACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCT...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: LNVSRTPVALGLTWARRPLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: AGSIAQASLSSLSCVASPMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp CAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTaGCACGATGCTCCGTCACCTCCTTTGATCCTCCTG +
Preference number: 3 (lower is better)
Translates to: QLAWVSDPLRLP*HDAPSPPLILL
Trigger: CAGGAGGATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp ACATCCAGCTGTCAGCAGGAAGAAGTCAGTCTCCACTaGCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGT +
Preference number: 3 (lower is better)
Translates to: TSSCQQEEVSLH*LHSLRCHAVSR
Trigger: ACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAGACTGACTTCTTCCTGCTGACAGCTGGATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTAGCCTTCACCCATCTTaGTGCCCTGAGGTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: AGSIAQASLSSLSCVASPSLHPS*CPEVLG
Trigger: ACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCT...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCGAGAGCTTCTCTGCTaGGGTCCTACGGTTCCAAGC +
Preference number: 3 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRELLC*GPTVPS
Trigger: GCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATGCGTGGCATCTCCTTaGAGGGTCAGAGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKCVASP*RVREAR
Trigger: CCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGCA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGCCGTCTGGGTTTGCTaGTTCACCTCCAATGACGAG +
Preference number: 3 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDAVWVC*FTSNDE
Trigger: CTCGTCATTGGAGGTGAACAAGCAAACCCAGACGGC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp GGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTaGGTGGCATCTCCTTTGAGGGTCAGAGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: GSIAQASLSSLS*VASPLRVREAR
Trigger: CCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp AGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACCCATCTTTGTGCCCTG +
Preference number: 3 (lower is better)
Translates to: RWPARSRPLSLA*IMPAFTHLCAL
Trigger: CAGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGAGCCTTCACCCATCTTaGTGCCCTGAGGTCTTGGGT +
Preference number: 3 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTSLHPS*CPEVLG
Trigger: ACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCTTTGGGGTTATACATaGCTCAGTGGCTTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: VPASMPASDATCKTGGTTLWGYT*LSGLEV
Trigger: GACCTCCAAGCCACTGAGCAATGTATAACCCCAAAG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 72 bp GCTAAGAGGGGATGTTCCTGCCAGCATGCCAGCCTCTaGTGCCACCTGCAAAACTGGTGGCACCACCTCAAA +
Preference number: 3 (lower is better)
Translates to: AKRGCSCQHASL*CHLQNWWHHLK
Trigger: TTTGAGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACATCCCCTCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp AACCAGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTTCACCCATCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: NQMASPKSTPQS*LDHASLHPSLC
Trigger: GCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp GGCCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTaGTTGGGTCCTACGGTTCCAAGCCTGGTTCCATTT +
Preference number: 3 (lower is better)
Translates to: GPAEIFLARELL*LGPTVPSLVPF
Trigger: AAATGGAACCAGGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDSNPND*SNGVWH
Trigger: GTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTTGGGTTTCTGACCCATaGAGACTGCCGTGCCACGAT +
Preference number: 3 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPWVSDP*RLPCHD
Trigger: ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCA...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp CTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGCACAGGATGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: LTVTGFHLHEVT*CLADGGTGCGG
Trigger: GCCCCCACATCCTGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASTPQSC*DHASLH
Trigger: GTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCC +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGLDPLP*WAQPTS
Trigger: GGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCATGGACGACACCATaGCACATAAAAGCACTAGTG +
Preference number: 3 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKAWTTP*HIKALV
Trigger: CACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 72 bp CGGTTCCAAGCCTGGTTCCATTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTCGGGGCCGGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: RFQAWFHFLLIW*ESTSTFGAGVA
Trigger: AGCCACTCCGGCCCCGAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGGAACCAGGCTTGGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 72 bp CTAGACCCATCACTCGCTAGGCCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGGAAGAAGTCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: LDPSLARPDLHV*HPAVSRKKSVS
Trigger: GGAGACTGACTTCTTCCTGCTGACAGCTGGATGTCACACATGAAGGTCTGGCCTAGCGAGTGATGGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCAGGGTCTTTGGAAAGTaGGGTGTGGCCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSRVFGK*GVASKV
Trigger: CACCTTGGAGGCCACACCCAACTTTCCAAAGACCCT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTGGGTTTCTGACCCATaGAGACTGCCGTGCCACGAT +
Preference number: 3 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSWVSDP*RLPCHD
Trigger: ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCTTGTCTCAGGGTCTTaGGAAAGTTGGGTGTGGCCT +
Preference number: 3 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSLVSGS*ESWVWP
Trigger: AGGCCACACCCAACTTTCCAAAGACCCTGAGACAAG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGCAGCCCCAGAATGTTaGCTGCTGTCGTGCATGGAC +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGAAPEC*LLSCMD
Trigger: GTCCATGCACGACAGCAGCAAACATTCTGGGGCTGC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGCCGTCTGGGTTTGCTaGTTCACCTCCAATGACGAG +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGAVWVC*FTSNDE
Trigger: CTCGTCATTGGAGGTGAACAAGCAAACCCAGACGGC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCACTAGTGCTCCATTATaGCAGTTGGGCCTCCTGAAA +
Preference number: 3 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSTSAPL*QLGLLK
Trigger: TTTCAGGAGGCCCAACTGCAATAATGGAGCACTAGT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCATGGACGACACCATaGCACATAAAAGCACTAGTG +
Preference number: 3 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPAWTTP*HIKALV
Trigger: CACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTCCAGAGTGCACATCTaGCCTTTCTCCCTTCAATGT +
Preference number: 3 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSRVHI*PFSLQC
Trigger: ACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp CCTGCAAAACTGGTGGCACCACCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTCAGTACAAACAACTCC +
Preference number: 3 (lower is better)
Translates to: PAKLVAPPQTQQ*PFQTWLSTNNS
Trigger: GGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp TATAGAAGCAACCCTAACGATTTGAGCAATGGAGTCTaGCACAGGCTCAGCAGGTGGAGGAAGAGTAAGCTG +
Preference number: 3 (lower is better)
Translates to: YRSNPNDLSNGV*HRLSRWRKSKL
Trigger: CAGCTTACTCTTCCTCCACCTGCTGAGCCTGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCTTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNTPQSC*DHASLH
Trigger: GTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAAC +
Preference number: 3 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPPFSSH*VRVHLN
Trigger: GTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR GCA 72 bp CGTGGGAACAATAAAAAGCAGCCCCAGAATGTTTGCTaGTGTCGTGCATGGACGACACCATTGCACATAAAA +
Preference number: 3 (lower is better)
Translates to: RGNNKKQPQNVC*CRAWTTPLHIK
Trigger: TTTTATGTGCAATGGTGTCGTCCATGCACGACAGCAGCAAACATTCTGGGGCTGCTTTTTATTGTTCCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAAC +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGPFSSH*VRVHLN
Trigger: GTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATGCGTGGCATCTCCTTaGAGGGTCAGAGAAGCCAGG +
Preference number: 3 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTCVASP*RVREAR
Trigger: CCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGCA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGGGATCAAGAGGTTATaGCTAGGACATCAGTTTCAG +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGGIKRL*LGHQFQ
Trigger: CTGAAACTGATGTCCTAGCAATAACCTCTTGATCCC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CCA 72 bp GCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCCCAAACCATACACTTT +
Preference number: 3 (lower is better)
Translates to: APPQTQQWPFQT*LSTNNSQTIHF
Trigger: AAAGTGTATGGTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR TCA 72 bp AGGAAACTTAAAAGTCTTCAAATCCAACCCCCAATTTaGAGTCCTAGTGGAGCCGTCTGGGTTTGCTTGTTC +
Preference number: 3 (lower is better)
Translates to: RKLKSLQIQPPI*SPSGAVWVCLF
Trigger: GAACAAGCAAACCCAGACGGCTCCACTAGGACTTCAAATTGGGGGTTGGATTTGAAGACTTTTAAGTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGCTCCATTATTGCAGTaGGGCCTCCTGAAAACCCCT +
Preference number: 3 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTAPLLQ*GLLKTP
Trigger: AGGGGTTTTCAGGAGGCCCAACTGCAATAATGGAGC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGAGAGTATGTATCTCTaGCCATCAGAAATAGGCAAT +
Preference number: 3 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGESMYL*PSEIGN
Trigger: ATTGCCTATTTCTGATGGCAAGAGATACATACTCTC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTSNPND*SNGVWH
Trigger: GTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGTGGCCAGGGCCAGGTaGGAGGCCTCCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLVARAR*EASTSL
Trigger: CAAGGAGGTGGAGGCCTCCCACCTGGCCCTGGCCAC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGCGTGTTGGGGAAGCTaGGCTGCCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWACWGS*AARPRV
Trigger: CACCCTGGGCCTGGCAGCTCAGCTTCCCCAACACGC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGGAGCAGCCGACACCTaGAAAGGGGCACCCAATTCC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLGAADT*KGAPNS
Trigger: GGAATTGGGTGCCCCTTTGCAGGTGTCGGCTGCTCC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGCTCTCGGAGCAGGGTaGCCGGTAGCAATCGACCTC +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWALGAG*PVAIDL
Trigger: GAGGTCGATTGCTACCGGGCACCCTGCTCCGAGAGC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGTCCAGCTGGCTCTGGTaGATAGAGGTGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWSSWLW*IEVARA
Trigger: GGCCCTGGCCACCTCTATCCACCAGAGCCAGCTGGA...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLTGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp GAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCCACGTCCTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: EGSSSACLLLDP*PLWAQPTSCHP
Trigger: AGGATGGCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp TGTGGGCCACCACCAGGCCATGACAGGCGGGCAGTATaGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: CGPPPGHDRRAV*PRLLSPVCPAW
Trigger: CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATGGCCTGGTGGTGGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACTGGGGAGAAGAGGCTaGCGGTCCTGCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLGRRG*RSCHRP
Trigger: CGGCCTGTGGCAGGACCGTCAGCCTCTTCTCCCCAG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCGTGTTGGGGAAGCTaGGCTGCCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKACWGS*AARPRV
Trigger: CACCCTGGGCCTGGCAGCTCAGCTTCCCCAACACGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCAGCATGCCAGCCTCTaGTGCCACCTGCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLQHASL*CHLQNW
Trigger: CCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGGGCCGGGCGAGGACTaGTGCCTGAGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTGPGED*CLSWRP
Trigger: TGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGGCCC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGACTTCCACGGCTGCCTaGAGCTGCAGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWTSTAA*SCRSDR
Trigger: CCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGT...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCTCCACAGTCTCCGCTaGCACGCTGTCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTLHSLR*HAVSRG
Trigger: CCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCTCAGGGTTCCAGGCTaGCCAGAGGGCCTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLLRVPG*PEGLFK
Trigger: CTTAAACAGGCCCTCTGGCCAGCCTGGAACCCTGAG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGGCTCCTTTGGGTCCTaGCAGACGGTGGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTGSFGS*QTVGGH
Trigger: GTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGGGCCAGCTCCTCCTaGCTCTCGGAGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRASSS*LSEQGA
Trigger: GGCACCCTGCTCCGAGAGCCAGGAGGAGCTGGCCCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGTGGCCAGGGCCAGGTaGGAGGCCTCCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPVARAR*EASTSL
Trigger: CAAGGAGGTGGAGGCCTCCCACCTGGCCCTGGCCAC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCGAGGACTGCTGCCTaGGCTGGAGGCCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKARTAA*AGGHLR
Trigger: CCTGAGATGGCCTCCAGCTCAGGCAGCAGTCCTCGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAACTGTGGGCTTCCCTTaGAGGAGCAGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGTVGFP*RSSRHL
Trigger: CAGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGT...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCTGCAGCTGCAGGTCTaGCAGGTTCTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPLQLQV*QVLLQG
Trigger: GCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATGGGCCAGGGTCTGCTaGAGCTCCACCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKWARVC*SSTTLC
Trigger: GCAGAGGGTGGTGGAGCTTCAGCAGACCCTGGCCCA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTGGGCCAGGGTCTGCTaGAGCTCCACCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSWARVC*SSTTLC
Trigger: GCAGAGGGTGGTGGAGCTTCAGCAGACCCTGGCCCA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGCAGCATGCCAGCCTCTaGTGCCACCTGCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWQHASL*CHLQNW
Trigger: CCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTG...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCCTCGGGGTGAGCTGTaGTCCTGGGCAGCACTGCTA +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTPRGEL*SWAALL
Trigger: TAGCAGTGCTGCCCAGGATCACAGCTCACCCCGAGG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCCGGGCGAGGACTGCTaGCTGAGCTGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSPGEDC*LSWRPS
Trigger: AGATGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAACGGCTGCCTGCAGCTaGAGGTCTGACAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGTAACS*RSDRFC
Trigger: GCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGT...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPAQPTS*HPNQMA
Trigger: GGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGGCCCAGCCCACGTCCTaGCATCCTAACCAGATGGCC +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWAQPTS*HPNQMA
Trigger: GGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGGC...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGCCCAGGGTGGCAGGTaGCCTGTGGACCAGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSAQGGR*PVDQVS
Trigger: ACTGACCTGGTCCACAGGGCACCTGCCACCCTGGGC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACTCCACAGTCTCCGCTaGCACGCTGTCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLHSLR*HAVSRG
Trigger: CCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGGGGACCAGCCTTGTaGAGTCCTGGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRGPAL*SPGLGL
Trigger: GAGGCCCAGGCCAGGACTCCACAAGGCTGGTCCCCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCACAGCAGAGAGCCCTaGGCTCCTTTGGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTHSREP*APLGPG
Trigger: GCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAACAGCAGGTTTAGGTaGGAGGTCTGGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLNSRFR*EVWEVT
Trigger: GGTCACCTCCCAGACCTCCCACCTAAACCTGCTGTT...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGTGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGAAATCCCCTGGATGGTaGCTGAAGGCTTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWKSPGW*LKASWW
Trigger: CCACCAGGAAGCCTTCAGTCACCATCCAGGGGATTT...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACATTTGGGGCAGATCTaGTCCTCGCCATTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGHLGQI*SSPFLG
Trigger: CCCGAGGAATGGCGAGGATCAGATCTGCCCCAAATG...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCACTGTGGGCTTCCCTTaGAGGAGCAGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTTVGFP*RSSRHL
Trigger: CAGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCTGCAGCTGCAGGTCTaGCAGGTTCTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDLQLQV*QVLLQG
Trigger: GCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCTGGGGAGAAGAGGCTaGCGGTCCTGCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPLGRRG*RSCHRP
Trigger: CGGCCTGTGGCAGGACCGTCAGCCTCTTCTCCCCAG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGGGCTCAACACTCGGTaGGTAGGGATCAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLGLNTR*VGIKRL
Trigger: TAACCTCTTGATCCCTACTCACCGAGTGTTGAGCCC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGGAGCAGCCGACACCTaGAAAGGGGCACCCAATTCC +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTGAADT*KGAPNS
Trigger: GGAATTGGGTGCCCCTTTGCAGGTGTCGGCTGCTCC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGCTCTCGGAGCAGGGTaGCCGGTAGCAATCGACCTC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSALGAG*PVAIDL
Trigger: GAGGTCGATTGCTACCGGGCACCCTGCTCCGAGAGC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGCGTGCTTGGGTGACTaGAGTTTGCTGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCACLGD*SLLRGK
Trigger: CTTCCCCCTCAGCAAACTGCAGTCACCCAAGCACGC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGCCCGAGAGCTTCTCTaGTTGGGTCCTACGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCARELL*LGPTVP
Trigger: TGGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATCTCCCTGGCGGCCCTaGAGAGATCTTCCTAGCCCG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKSPWRP*RDLPSP
Trigger: CGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAGA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCCATTGAGACTGCCGTaGCACGATGCTCCGTCACCT +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCPLRLP*HDAPSP
Trigger: AGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGG...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTAGGGGACCAGCCTTGTaGAGTCCTGGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPRGPAL*SPGLGL
Trigger: GAGGCCCAGGCCAGGACTCCACAAGGCTGGTCCCCT...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTAGGGCCAGCTCCTCCTaGCTCTCGGAGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPRASSS*LSEQGA
Trigger: GGCACCCTGCTCCGAGAGCCAGGAGGAGCTGGCCCT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTCCAGCTGGCTCTGGTaGATAGAGGTGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSSSWLW*IEVARA
Trigger: GGCCCTGGCCACCTCTATCCACCAGAGCCAGCTGGA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATAGCTTGCCCAGGGCCTaGTCTTTCTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDSLPRA*SFWARV
Trigger: GACCCTGGCCCAGAAAGACCAGGCCCTGGGCAAGCT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCCACAGGCCGACTCATaGCACCGCCTGGTGACATTG +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPPQADS*HRLVTL
Trigger: CAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTSSLLS*SSLRSP
Trigger: GGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCC +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPAILTR*PARSRP
Trigger: GGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPDPLPL*AQPTSC
Trigger: GCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGACCCTTTGCCTTTGTaGGCCCAGCCCACGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSDPLPL*AQPTSC
Trigger: GCAGGACGTGGGCTGGGCCCACAAAGGCAAAGGGTC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDPPSVA*SVQRGA
Trigger: TGCTCCCCTCTGCACGGACCATGCGACACTGGGAGG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTGGAGGCACAGGATGTaGGGGCTGGGTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPWRHRM*GLGVLL
Trigger: CAGGAGCACACCCAGCCCCCACATCCTGTGCCTCCA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAGGCTTAGAGCCCAGCTaGCCTGGGTTTCTGACCCAT +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGGLEPS*PGFLTH
Trigger: ATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCC...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGTAGGCGTGCTTGGGTaGCTGCAGTTTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSVGVLG*LQFAEG
Trigger: CCCCTCAGCAAACTGCAGTCACCCAAGCACGCCTAC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGTAGGCGTGCTTGGGTaGCTGCAGTTTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDVGVLG*LQFAEG
Trigger: CCCCTCAGCAAACTGCAGTCACCCAAGCACGCCTAC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWWLAPF*VGAPSG
Trigger: TCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPPIFVP*GLGCQG
Trigger: CCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSPIFVP*GLGCQG
Trigger: CCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCTGGGTTTCACCTGCATaGAGTGACGTGGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLWVSPA*SDVVFS
Trigger: GCTAAACACCACGTCACTTCATGCAGGTGAAACCCA...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGCGTGGCATCTCCTTTaGGGGTCAGAGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDAWHLL*GSEKPG
Trigger: CCCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACTGAGCTTAAAGGCCTaGAGCCTTCCCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGLSLKA*SLPSFT
Trigger: GGTGAAGGAGGGAAGGCTTCAGGCCTTTAAGCTCAG...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTAGGTCTGACAGGTTCTaGTCCAGGGCCATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPRSDRF*SRAMGP
Trigger: TGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCT...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCAGGTCTGACAGGTTCTaGTCCAGGGCCATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSRSDRF*SRAMGP
Trigger: TGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTATGAGGCGCAAGCTCTaGTCCAGCTTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPMRRKL*SSLPRA
Trigger: GGCCCTGGGCAAGCTGGAGCAGAGCTTGCGCCTCAT...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCCCGCCCACCCTAAGTaGTGGTCTCCACAATGCACT +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTPAHPK*WSPQCT
Trigger: AGTGCATTGTGGAGACCAGCACTTAGGGTGGGCGGG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTTTGGGGAAGCTGAGCTaGCAGGCCCAGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPLGKLS*QAQGGR
Trigger: CCTGCCACCCTGGGCCTGGCAGCTCAGCTTCCCCAA...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTTGGQY*PGFSLQ
Trigger: CTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCACTGCCGTGCCACGATaGTCCGTCACCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCTAVPR*SVTSFD
Trigger: ATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGT...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCCATTGAGACTGCCGTaGCACGATGCTCCGTCACCT +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWPLRLP*HDAPSP
Trigger: AGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGG...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGCCTGGGCTTATAGACTaGAGGTCTTCCCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWPGLID*RSSPLH
Trigger: ATGCAGAGGGGAAGACCTCCAGTCTATAAGCCCAGG...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTCCAGCTGGCTCTGGTaGATAGAGGTGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPSSWLW*IEVARA
Trigger: GGCCCTGGCCACCTCTATCCACCAGAGCCAGCTGGA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCCACAGGCCGACTCATaGCACCGCCTGGTGACATTG +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSPQADS*HRLVTL
Trigger: CAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCATCCACTGGCCACGTTaGTTTCACTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCIHWPR*FHSGAS
Trigger: AGAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGAT...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKSSLLS*SSLRSP
Trigger: GGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCT...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCPLSLA*IMPAFT
Trigger: GGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGG...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCC +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDAILTR*PARSRP
Trigger: GGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTPPSVA*SVQRGA
Trigger: TGCTCCCCTCTGCACGGACCATGCGACACTGGGAGG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGCCGGAGTGGCTCACTaGCCTCCCAGTGTCGCATGG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPAGVAH*PPSVAW
Trigger: CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAGAGAGCTTCTCTGCTTaGGTCCTACGGTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGESFSA*VLRFQA
Trigger: GGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTC...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGGTGTTACGGGATTCTaGAAAGCACCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWGVTGF*KAPKVG
Trigger: CCCCACCTTTGGTGCTTTCCAGAATCCCGTAACACC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGGGAGGTCTGGGAGGTaGCCTCATGCTCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTGRSGR*PHALAQ
Trigger: CTGTGCAAGAGCATGAGGTCACCTCCCAGACCTCCC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACCTGGGAGCTCACAGTaGCTGGGTTTCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKPGSSQ*LGFTCM
Trigger: CATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGCGTGGCATCTCCTTTaGGGGTCAGAGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTAWHLL*GSEKPG
Trigger: CCCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGCTGGCCTGGGTTTCTaGCCCATTGAGACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPAGLGF*PIETAV
Trigger: CACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGGGCCGGGCGAGGACTaGTGCCTGAGCTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSGPGED*CLSWRP
Trigger: TGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGGCCC...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGGAGCAGCCGACACCTaGAAAGGGGCACCCAATTCC +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTGAADT*KGAPNS
Trigger: GGAATTGGGTGCCCCTTTGCAGGTGTCGGCTGCTCC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGCTCCAAGCTCAGGATaGGCTCACGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPAPSSG*AHGPAG
Trigger: GCCAGCTGGACCGTGAGCGCATCCTGAGCTTGGAGC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGCGTGCTTGGGTGACTaGAGTTTGCTGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKACLGD*SLLRGK
Trigger: CTTCCCCCTCAGCAAACTGCAGTCACCCAAGCACGC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGCGTGCTTGGGTGACTaGAGTTTGCTGAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPACLGD*SLLRGK
Trigger: CTTCCCCCTCAGCAAACTGCAGTCACCCAAGCACGC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGCCCGAGAGCTTCTCTaGTTGGGTCCTACGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDARELL*LGPTVP
Trigger: TGGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSTGGQY*PGFSLQ
Trigger: CTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGTTTGATCCTCCTGTATaGTGGGCTGGAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWFDPPV*WAGENR
Trigger: CCTGTTCTCTCCAGCCCAGCATACAGGAGGATCAAA...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACCATTGAGACTGCCGTaGCACGATGCTCCGTCACCT +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKPLRLP*HDAPSP
Trigger: AGGTGACGGAGCATCGTGGCACGGCAGTCTCAATGG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCCAGAGTGCACATCTTaGCTTTCTCCCTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLPECTS*LSPFNV
Trigger: GACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCACAGCAGAGAGCCCTaGGCTCCTTTGGGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPHSREP*APLGPG
Trigger: GCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCGCTCACGGTCCAGCTaGCTCTGGTGGATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTRSRSS*LWWIEV
Trigger: CACCTCTATCCACCAGAGCCAGCTGGACCGTGAGCG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCCACAGGCCGACTCATaGCACCGCCTGGTGACATTG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPPQADS*HRLVTL
Trigger: CAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGGCAGTGTAGAAGGCTaGGGAGAAGAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPGSVEG*GEEADG
Trigger: ACCGTCAGCCTCTTCTCCCCAGCCTTCTACACTGCC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATCACTCTGGGGCCTCTaGAAGGACGCTGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKSLWGL*KDAELR
Trigger: CCTAAGCTCAGCGTCCTTCCAGAGGCCCCAGAGTGA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGATCCACTGGCCACGTTaGTTTCACTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWIHWPR*FHSGAS
Trigger: AGAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGAT...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGCTGCATGAAGTGACGTaGTGTTTAGCTGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWLHEVT*CLADGG
Trigger: GCCTCCATCAGCTAAACACCACGTCACTTCATGCAG...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGCCTCTGGCTGCACCTaGGAGCTCACAGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPASGCT*ELTVTG
Trigger: CCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGAGGC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTTCTTGAGGTGCCTCTaGCTGCACCTGGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPFLRCL*LHLGAH
Trigger: GTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTTCTTGAGGTGCCTCTaGCTGCACCTGGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSFLRCL*LHLGAH
Trigger: GTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGGGAGGGAGGCAAGCTaGGGTGGGTCTCATTATAGA +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPGREAS*GGSHYR
Trigger: TCTATAATGAGACCCACCCCAGCTTGCCTCCCTCCC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGGCTTAGAGCCCAGCTaGCCTGGGTTTCTGACCCAT +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPGLEPS*PGFLTH
Trigger: ATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGTGCTGCTGTCGTGCATaGACGACACCATTGCACATA +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWCCCRA*TTPLHI
Trigger: TATGTGCAATGGTGTCGTCCATGCACGACAGCAGCA...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCCTCCTTCACCAGCTaGATCTGGGATTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGPSFTS*IWDSVL
Trigger: AAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGG...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGGCCTCACTCTCTGGTaGGTAGGAGCTCTGATGACT +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKGLTLW*VGALMT
Trigger: AGTCATCAGAGCTCCTACTCACCAGAGAGTGAGGCC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGCCTTCCACTGTTTCATaGACCCCAACAGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWPSTVS*TPTAGL
Trigger: TAAACCTGCTGTTGGGGTTCATGAAACAGTGGAAGG...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCCCATCTTTGTGCCCTaGGGTCTTGGGTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPPIFVP*GLGCQG
Trigger: CCCTTGGCACCCAAGACCTCAGGGCACAAAGATGGG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGACCCGGTCCTGTTTCTaGCCCTGGAGAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWTRSCF*PWRKRE
Trigger: CTCTCTTTTTCTCCAGGGTCAGAAACAGGACCGGGT...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGCAACCCTAACGATTTaGGCAATGGAGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCATLTI*AMESGT
Trigger: TGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCTCCGTCACCTCCTTTaGTCCTCCTGTATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPLRHLL*SSCMLG
Trigger: GCCCAGCATACAGGAGGATCAAAGGAGGTGACGGAG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGGGTTTCTGACCCATTaGGACTGCCGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTGFLTH*DCRATM
Trigger: CATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCCTCTGATCTTCAGCTaGAGGACTAAGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCPLIFS*RTKHDR
Trigger: CCTGTCATGCTTAGTCCTTCAGCTGAAGATCAGAGG...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPPDLHV*HPAVSR
Trigger: CCTGCTGACAGCTGGATGTCACACATGAAGGTCTGG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGGGCTCAACACTCGGTaGGTAGGGATCAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPGLNTR*VGIKRL
Trigger: TAACCTCTTGATCCCTACTCACCGAGTGTTGAGCCC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCTGAGCTTAAAGGCCTaGAGCCTTCCCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPLSLKA*SLPSFT
Trigger: GGTGAAGGAGGGAAGGCTTCAGGCCTTTAAGCTCAG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTGGGAGGTGACCTCATaGTCTTGCACAGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPWEVTS*SCTDCG
Trigger: CCCACAGTCTGTGCAAGAGCATGAGGTCACCTCCCA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCATGAGGCGCAAGCTCTaGTCCAGCTTGCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASMRRKL*SSLPRA
Trigger: GGCCCTGGGCAAGCTGGAGCAGAGCTTGCGCCTCAT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCGAGCCTGGACAGACTaGATTCAAACTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPRAWTD*IQTGTP
Trigger: TGGGGTGCCAGTTTGAATGCAGTCTGTCCAGGCTCG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCGAGCCTGGACAGACTaGATTCAAACTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSRAWTD*IQTGTP
Trigger: TGGGGTGCCAGTTTGAATGCAGTCTGTCCAGGCTCG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATATGTTCCTGCCAGCATaGCAGCCTCTGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDMFLPA*QPLMPP
Trigger: AGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACAT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCTCTCCAGTCTGTCCTaGGTGGCATCTCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPLSSLS*VASPLR
Trigger: CCTCAAAGGAGATGCCACGCAGGACAGACTGGAGAG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCACTGCCGTGCCACGATaGTCCGTCACCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPTAVPR*SVTSFD
Trigger: ATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCACTGCCGTGCCACGATaGTCCGTCACCTCCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSTAVPR*SVTSFD
Trigger: ATCAAAGGAGGTGACGGAGCATCGTGGCACGGCAGT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGATGTTTGCTGCTGTCGTaGATGGACGACACCATTGCA +
Preference number: 4 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGCLLLS*MDDTIA
Trigger: TGCAATGGTGTCGTCCATGCACGACAGCAGCAAACA...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCTCCACAGTCTCCGCTaGCACGCTGTCAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPLHSLR*HAVSRG
Trigger: CCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACTGAAGGCTTCCTGGTaGAAATCCCCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLKASW*KSPGCW
Trigger: CCAACACCCTGGGGATTTCCACCAGGAAGCCTTCAG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGGTCCTGGCAGACGGTaGGAGGGCACCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASGPGRR*EGTQRE
Trigger: TTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCCTGGGCTTATAGACTaGAGGTCTTCCCCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWPGLID*RSSPLH
Trigger: ATGCAGAGGGGAAGACCTCCAGTCTATAAGCCCAGG...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGGCAGTGTAGAAGGCTaGGGAGAAGAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPGSVEG*GEEADG
Trigger: ACCGTCAGCCTCTTCTCCCCAGCCTTCTACACTGCC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCTCACGGTTGTTCTaGTCCAGCAGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTCSRLF*SSSMKV
Trigger: CACCTTCATGCTGCTGGACCAGAACAACCGTGAGCA...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTACGTTGGTTTCACTCTaGGGCCTCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPTLVSL*GLWKDA
Trigger: AGCGTCCTTCCAGAGGCCCCAGAGTGAAACCAACGT...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCACGTTGGTTTCACTCTaGGGCCTCTGGAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSTLVSL*GLWKDA
Trigger: AGCGTCCTTCCAGAGGCCCCAGAGTGAAACCAACGT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTATCCACTGGCCACGTTaGTTTCACTCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPIHWPR*FHSGAS
Trigger: AGAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGAT...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGAGACTGCATTCAAACTaGCACCCCATCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWRLHSN*HPIPST
Trigger: GGTGGAAGGGATGGGGTGCCAGTTTGAATGCAGTCT...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCAGACTGCATTCAAACTaGCACCCCATCCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTRLHSN*HPIPST
Trigger: GGTGGAAGGGATGGGGTGCCAGTTTGAATGCAGTCT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCGATCCTCCTGTATGCTaGGCTGGAGAGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTDPPVC*AGENRK
Trigger: CTTCCTGTTCTCTCCAGCCCAGCATACAGGAGGATC...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGAGCCCAGCTGGCCTaGGTTTCTGACCCATTGAGA +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRAQLA*VSDPLR
Trigger: TCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp CAGATGGCCAGCCCGAAGTCGACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCACCCATCTTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QMASPKSTPQSC*DHASLHPSLCP
Trigger: AGGGCACAAAGATGGGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGACTTCGGGCTGGCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTATCTTGCCTGGGACTaGGGCAACCAGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPYLAWD*GNQKEQ
Trigger: CTGCTCCTTCTGGTTGCCTCAGTCCCAGGCAAGATA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGGGAGGTCTGGGAGGTaGCCTCATGCTCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASGRSGR*PHALAQ
Trigger: CTGTGCAAGAGCATGAGGTCACCTCCCAGACCTCCC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAACCCGGTCCTGTTTCTaGCCCTGGAGAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKTRSCF*PWRKRE
Trigger: CTCTCTTTTTCTCCAGGGTCAGAAACAGGACCGGGT...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTGGGTTTCACCTGCATaGAGTGACGTGGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWWVSPA*SDVVFS
Trigger: GCTAAACACCACGTCACTTCATGCAGGTGAAACCCA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCCTCTGATCTTCAGCTaGAGGACTAAGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTPLIFS*RTKHDR
Trigger: CCTGTCATGCTTAGTCCTTCAGCTGAAGATCAGAGG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGGGAGAGGCTTCCTCTaGTCTTCAGCTGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSGRGFL*SSAEGL
Trigger: TAGTCCTTCAGCTGAAGATCAGAGGAAGCCTCTCCC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGGAGGTCTTCCCCTCTaGATTTGGGGCAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSGGLPL*IWGRSD
Trigger: ATCAGATCTGCCCCAAATGCAGAGGGGAAGACCTCC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCTCCAAGCTCAGGATaGGCTCACGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPAPSSG*AHGPAG
Trigger: GCCAGCTGGACCGTGAGCGCATCCTGAGCTTGGAGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGTGTCGCATGGTCCGTaGAGAGGGGAGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSVSHGP*RGEQLC
Trigger: GCAGAGCTGCTCCCCTCTGCACGGACCATGCGACAC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCATTGGGGAAGCTGAGCTaGCAGGCCCAGGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSLGKLS*QAQGGR
Trigger: CCTGCCACCCTGGGCCTGGCAGCTCAGCTTCCCCAA...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGATGTTCCTGCCAGCATaGCAGCCTCTGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTMFLPA*QPLMPP
Trigger: AGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACAT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCTCTCCAGTCTGTCCTaGGTGGCATCTCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTLSSLS*VASPLR
Trigger: CCTCAAAGGAGATGCCACGCAGGACAGACTGGAGAG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTTTTGATCCTCCTGTATaGTGGGCTGGAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPFDPPV*WAGENR
Trigger: CCTGTTCTCTCCAGCCCAGCATACAGGAGGATCAAA...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCTTCCCCTCTGCATTTaGGGCAGATCTGATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPLPLCI*GRSDPR
Trigger: GCGAGGATCAGATCTGCCCCAAATGCAGAGGGGAAG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTCGAAGACGGCTTCCTaGGCTTATAGACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPSKTAS*AYRLEV
Trigger: GACCTCCAGTCTATAAGCCCAGGAAGCCGTCTTCGA...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCTCTTGCACAGACTGTaGGCTTCCCTTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPLLHRL*ASLEGA
Trigger: TGCTCCTTCAAGGGAAGCCCACAGTCTGTGCAAGAG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCTCTTGCACAGACTGTaGGCTTCCCTTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDLLHRL*ASLEGA
Trigger: TGCTCCTTCAAGGGAAGCCCACAGTCTGTGCAAGAG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCAGCTTGCCCAGGGCCTaGTCTTTCTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSLPRA*SFWARV
Trigger: GACCCTGGCCCAGAAAGACCAGGCCCTGGGCAAGCT...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTTCACTCTGGGGCCTCTaGAAGGACGCTGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPSLWGL*KDAELR
Trigger: CCTAAGCTCAGCGTCCTTCCAGAGGCCCCAGAGTGA...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCAGAGTGGGCATCCACTaGCCACGTTGGTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPRVGIH*PRWFHS
Trigger: AGAGTGAAACCAACGTGGCCAGTGGATGCCCACTCT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCCTCCCAGTGTCGCATaGTCCGTGCAGAGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSPPSVA*SVQRGA
Trigger: TGCTCCCCTCTGCACGGACCATGCGACACTGGGAGG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGGGAGGGAGGCAAGCTaGGGTGGGTCTCATTATAGA +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTGREAS*GGSHYR
Trigger: TCTATAATGAGACCCACCCCAGCTTGCCTCCCTCCC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGATCCTCCTGTATGCTaGGCTGGAGAGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPDPPVC*AGENRK
Trigger: CTTCCTGTTCTCTCCAGCCCAGCATACAGGAGGATC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCTGCTGTCGTGCATaGACGACACCATTGCACATA +
Preference number: 4 (lower is better)
Translates to: VPASMPASDATCKTGGTTCCCRA*TTPLHI
Trigger: TATGTGCAATGGTGTCGTCCATGCACGACAGCAGCA...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAACAGCTGTTTCTCATaGGGGCTTGTTCTACAAATC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLNSCFS*GLVLQI
Trigger: GATTTGTAGAACAAGCCCCCATGAGAAACAGCTGTT...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCCCTCCTTCACCAGCTaGATCTGGGATTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSPSFTS*IWDSVL
Trigger: AAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCCCCTGGATGGTGACTaGAGGCTTCCTGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPPLDGD*RLPGGN
Trigger: ATTTCCACCAGGAAGCCTTCAGTCACCATCCAGGGG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCACTGTGGGCTTCCCTTaGAGGAGCAGCCGACACCTG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPTVGFP*RSSRHL
Trigger: CAGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGT...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCCTTCCACTGTTTCATaGACCCCAACAGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPPSTVS*TPTAGL
Trigger: TAAACCTGCTGTTGGGGTTCATGAAACAGTGGAAGG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCCTCCACCTCCTTGTTaGGGACAGCAACAATGTTCT +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPPPPPC*GQQQCS
Trigger: AGAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACCTCCACCTCCTTGTTaGGGACAGCAACAATGTTCT +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKPPPPC*GQQQCS
Trigger: AGAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTACCCGGTCCTGTTTCTaGCCCTGGAGAAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPTRSCF*PWRKRE
Trigger: CTCTCTTTTTCTCCAGGGTCAGAAACAGGACCGGGT...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGCGTGGCATCTCCTTTaGGGGTCAGAGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSAWHLL*GSEKPG
Trigger: CCCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCAACCCTAACGATTTaGGCAATGGAGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPATLTI*AMESGT
Trigger: TGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGGGTTTCTGACCCATTaGGACTGCCGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASGFLTH*DCRATM
Trigger: CATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCAGGTCTGACAGGTTCTaGTCCAGGGCCATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSRSDRF*SRAMGP
Trigger: TGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGGGTTCTCTTTCCAGTaGCATCTCCATTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPGFSFQ*HLHSGT
Trigger: TGTACCTGAATGGAGATGGCACTGGAAAGAGAACCC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCCCCGCCCACCCTAAGTaGTGGTCTCCACAATGCACT +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASPAHPK*WSPQCT
Trigger: AGTGCATTGTGGAGACCAGCACTTAGGGTGGGCGGG...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCAGAGGGGAGCAGCTCTaGCTGTCTCCTTCTGGACCC +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPRGEQL*LSPSGP
Trigger: GGGTCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCT...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAATGGCTGCATCTCATaGTCTTTGAAGAGAGTATGT +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLNGCIS*SLKRVC
Trigger: ACATACTCTCTTCAAAGAGCATGAGATGCAGCCATT...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCTTTTCCCCATCCTCTaGATTTCACAATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLLFPIL*ISQYSQ
Trigger: CTGAGAATATTGTGAAATGCAGAGGATGGGGAAAAG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTTGCTCTGCTCTGTTTaGAGTGTCTGGGTGACCTCA +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPLLCSV*SVWVTS
Trigger: TGAGGTCACCCAGACACTCCAAACAGAGCAGAGCAA...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATTCTCTCTGGCTTGTGTaGTTCAACGTCACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDSLWLV*FNVTAE
Trigger: CTCAGCTGTGACGTTGAACCACACAAGCCAGAGAGA...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGTGGCCAGGGCCAGGTaGGAGGCCTCCACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLVARAR*EASTSL
Trigger: CAAGGAGGTGGAGGCCTCCCACCTGGCCCTGGCCAC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTCACTCTGGGGCCTCTaGAAGGACGCTGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASSLWGL*KDAELR
Trigger: CCTAAGCTCAGCGTCCTTCCAGAGGCCCCAGAGTGA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGAGAGTGGGCATCCACTaGCCACGTTGGTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTRVGIH*PRWFHS
Trigger: AGAGTGAAACCAACGTGGCCAGTGGATGCCCACTCT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPPLSLA*IMPAFT
Trigger: GGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGAGAGCTTCTCTGCTTaGGTCCTACGGTTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPESFSA*VLRFQA
Trigger: GGCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTTCTTGAGGTGCCTCTaGCTGCACCTGGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASFLRCL*LHLGAH
Trigger: GTGAGCTCCCAGGTGCAGCCAGAGGCACCTCAAGAA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPPQTQQ*PFQTWL
Trigger: GAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATTGTCTCAGGGTCTTTaGAAAGTTGGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLSQGL*KVGCGL
Trigger: GAGGCCACACCCAACTTTCCAAAGACCCTGAGACAA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATTTGTCTCAGGGTCTTTaGAAAGTTGGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDLSQGL*KVGCGL
Trigger: GAGGCCACACCCAACTTTCCAAAGACCCTGAGACAA...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCATTTGGGGCAGATCTaGTCCTCGCCATTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPHLGQI*SSPFLG
Trigger: CCCGAGGAATGGCGAGGATCAGATCTGCCCCAAATG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCCCTTCCACTGTTTCATaGACCCCAACAGCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: STVSAATLSAVGTIKSSPPSTVS*TPTAGL
Trigger: TAAACCTGCTGTTGGGGTTCATGAAACAGTGGAAGG...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCTGGGGAGAAGAGGCTaGCGGTCCTGCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSLGRRG*RSCHRP
Trigger: CGGCCTGTGGCAGGACCGTCAGCCTCTTCTCCCCAG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACATGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTWLAPF*VGAPSG
Trigger: TCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCA...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTAGGACAGGAAGCTCCTaGATGTTTCCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPRTGSS*MFPEPL
Trigger: CAGGGGTTCTGGAAACATTCAGGAGCTTCCTGTCCT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGCGTGTTGGGGAAGCTaGGCTGCCAGGCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSACWGS*AARPRV
Trigger: CACCCTGGGCCTGGCAGCTCAGCTTCCCCAACACGC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACACCTGGGAGCTCACAGTaGCTGGGTTTCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTPGSSQ*LGFTCM
Trigger: CATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGG...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACACAGCATGCCAGCCTCTaGTGCCACCTGCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTQHASL*CHLQNW
Trigger: CCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTG...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGTGTGGCCTCCAAGGTaGGAAGATAGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSVWPPR*EDRCGP
Trigger: TGGCCCACACCTATCTTCTCACCTTGGAGGCCACAC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGCAACCCTAACGATTTaGGCAATGGAGTCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPATLTI*AMESGT
Trigger: TGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCCTCTGATCTTCAGCTaGAGGACTAAGCATGACAGG +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPPLIFS*RTKHDR
Trigger: CCTGTCATGCTTAGTCCTTCAGCTGAAGATCAGAGG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGGGAGAGGCTTCCTCTaGTCTTCAGCTGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPGRGFL*SSAEGL
Trigger: TAGTCCTTCAGCTGAAGATCAGAGGAAGCCTCTCCC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCCTGAGCTTAAAGGCCTaGAGCCTTCCCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASLSLKA*SLPSFT
Trigger: GGTGAAGGAGGGAAGGCTTCAGGCCTTTAAGCTCAG...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAAGGGCCTGTTTAAGTTaGTCCAGGGCAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTRACLS*SRAGDQ
Trigger: CTGGTCCCCTGCCCTGGAGCAACTTAAACAGGCCCT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCGGGCGAGGACTGCTaGCTGAGCTGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLPGEDC*LSWRPS
Trigger: AGATGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAACTTCCACGGCTGCCTaGAGCTGCAGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSTSTAA*SCRSDR
Trigger: CCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGT...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGCTCTCGGAGCAGGGTaGCCGGTAGCAATCGACCTC +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEALGAG*PVAIDL
Trigger: GAGGTCGATTGCTACCGGGCACCCTGCTCCGAGAGC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTTTGGGGTTATACATTaGTCAGTGGCTTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSFGVIH*SVAWRS
Trigger: GGACCTCCAAGCCACTGAGCAATGTATAACCCCAAA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGCCTCTGATGCCACCTaGAAAACTGGTGGCACCACC +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSASDAT*KTGGTT
Trigger: GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCCTCTGATGCCACCTaGAAAACTGGTGGCACCACC +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPASDAT*KTGGTT
Trigger: GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATCCAGAGTGCACATCTTaGCTTTCTCCCTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDPECTS*LSPFNV
Trigger: GACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGG...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTTTCTTGAGTCCAGAGTaGACATCTTGCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPFLSPE*TSCLSP
Trigger: GGGAGAAAGGCAAGATGTGCACTCTGGACTCAAGAA...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTTCTTGAGTCCAGAGTaGACATCTTGCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSFLSPE*TSCLSP
Trigger: GGGAGAAAGGCAAGATGTGCACTCTGGACTCAAGAA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCAATGATCTACTTATCTaGTCATTTCCTCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: PSPRPAILTRWPARSRPLNDLLI*SFPPLN
Trigger: GTTCAGTGGAGGAAATGAGCAGATAAGTAGATCATT...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGCAACAGGTGGCCTCTaGGCTGTAAGATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASATGGL*AVRFWD
Trigger: GTCCCAGAATCTTACAGCCCAGAGGCCACCTGTTGC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGTCACTTCCTCACAGTaGGTTCTGATGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPVTSSQ*VLMTPS
Trigger: AGATGGAGTCATCAGAACCCACTGTGAGGAAGTGAC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCTCAGGGTTCCAGGCTaGCCAGAGGGCCTGTTTAAG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPLRVPG*PEGLFK
Trigger: CTTAAACAGGCCCTCTGGCCAGCCTGGAACCCTGAG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGGCTCCTTTGGGTCCTaGCAGACGGTGGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLGSFGS*QTVGGH
Trigger: GTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTTCGAAGACGGCTTCCTaGGCTTATAGACTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPSKTAS*AYRLEV
Trigger: GACCTCCAGTCTATAAGCCCAGGAAGCCGTCTTCGA...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCTCTTGCACAGACTGTaGGCTTCCCTTGAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPLLHRL*ASLEGA
Trigger: TGCTCCTTCAAGGGAAGCCCACAGTCTGTGCAAGAG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACAGGGCCAGCTCCTCCTaGCTCTCGGAGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNRASSS*LSEQGA
Trigger: GGCACCCTGCTCCGAGAGCCAGGAGGAGCTGGCCCT...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCCCCCTCAGTCTTGCTTaGATCATGCCAGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASPLSLA*IMPAFT
Trigger: GGTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGG...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCATTCGGGGCCGGAGTaGCTCACTGGCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGHSGPE*LTGLPV
Trigger: CACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTTGTCTCAGGGTCTTTaGAAAGTTGGGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPLSQGL*KVGCGL
Trigger: GAGGCCACACCCAACTTTCCAAAGACCCTGAGACAA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAGAGCCCAGCTGGCCTaGGTTTCTGACCCATTGAGA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASRAQLA*VSDPLR
Trigger: TCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACACCCCTGGATGGTGACTaGAGGCTTCCTGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTPLDGD*RLPGGN
Trigger: ATTTCCACCAGGAAGCCTTCAGTCACCATCCAGGGG...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCAAATCCCCTGGATGGTaGCTGAAGGCTTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSKSPGW*LKASWW
Trigger: CCACCAGGAAGCCTTCAGTCACCATCCAGGGGATTT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCTGCAGCTGCAGGTCTaGCAGGTTCTGCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLLQLQV*QVLLQG
Trigger: GCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTGGGCCAGGGTCTGCTaGAGCTCCACCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNWARVC*SSTTLC
Trigger: GCAGAGGGTGGTGGAGCTTCAGCAGACCCTGGCCCA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCAGGTGCAGGTGTCAATaGAGCTTTGCTGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSRCRCQ*SFAERM
Trigger: CATTCTTTCAGCAAAGCTTCATTGACACCTGCACCT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGCTCATTTCCTCCACTaGACTAAGAGTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: AGSIAQASLSSLSCVASPAHFLH*TKSFLS
Trigger: ACTCAAGAAACTCTTAGTTCAGTGGAGGAAATGAGC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAAGGGCCTGTTTAAGTTaGTCCAGGGCAGGGGACCAG +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSRACLS*SRAGDQ
Trigger: CTGGTCCCCTGCCCTGGAGCAACTTAAACAGGCCCT...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGTGACCTCATGCTCTTaGACAGACTGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTVTSCS*TDCGLP
Trigger: GGGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCAC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGCTCCAAGCTCAGGATaGGCTCACGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLAPSSG*AHGPAG
Trigger: GCCAGCTGGACCGTGAGCGCATCCTGAGCTTGGAGC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTCTTCCACAGGAAAGTaGCATCGAAGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASSSTGK*HRRRPP
Trigger: AGGAGGCCTCCTTCGATGGCACTTTCCTGTGGAAGA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTTCTCCCTGGCGGCCCTaGAGAGATCTTCCTAGCCCG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGSPWRP*RDLPSP
Trigger: CGGGCTAGGAAGATCTCTGCAGGGCCGCCAGGGAGA...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAATGTTCCTGCCAGCATaGCAGCCTCTGATGCCACCT +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTMFLPA*QPLMPP
Trigger: AGGTGGCATCAGAGGCTGGCATGCTGGCAGGAACAT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCCTCTCCAGTCTGTCCTaGGTGGCATCTCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSLSSLS*VASPLR
Trigger: CCTCAAAGGAGATGCCACGCAGGACAGACTGGAGAG...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCCCCCAGAATGTTTGCTaGTGTCGTGCATGGACGACA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASPQNVC*CRAWTT
Trigger: TGTCGTCCATGCACGACAGCAGCAAACATTCTGGGG...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCAGCCCCAGAATGTTTaGTGCTGTCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPQPQNV*CCRAWT
Trigger: CGTCCATGCACGACAGCAGCAAACATTCTGGGGCTG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCTTTTCCCCATCCTCTaGATTTCACAATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCLFPIL*ISQYSQ
Trigger: CTGAGAATATTGTGAAATGCAGAGGATGGGGAAAAG...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGATGAAGAGCGACAGATaGGTTCTCTTTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTMKSDR*VLFPVP
Trigger: TGGCACTGGAAAGAGAACCCATCTGTCGCTCTTCAT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTGCTCACGGTTGTTCTaGTCCAGCAGCATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASCSRLF*SSSMKV
Trigger: CACCTTCATGCTGCTGGACCAGAACAACCGTGAGCA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAGAGTGGGCATCCACTaGCCACGTTGGTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASRVGIH*PRWFHS
Trigger: AGAGTGAAACCAACGTGGCCAGTGGATGCCCACTCT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAACAGGATGTGGGGGCTaGGTGTGCTCCTGCGTGTTG +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKETGCGG*VCSCVL
Trigger: CAACACGCAGGAGCACACCCAGCCCCCACATCCTGT...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGGTGTTACGGGATTCTaGAAAGCACCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASGVTGF*KAPKVG
Trigger: CCCCACCTTTGGTGCTTTCCAGAATCCCGTAACACC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAATGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCC +
Preference number: 4 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKWPFQT*LSTNNS
Trigger: GGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCA...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGGGAGGGAGGCAAGCTaGGGTGGGTCTCATTATAGA +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSGREAS*GGSHYR
Trigger: TCTATAATGAGACCCACCCCAGCTTGCCTCCCTCCC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGTAGGCGTGCTTGGGTaGCTGCAGTTTGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLVGVLG*LQFAEG
Trigger: CCCCTCAGCAAACTGCAGTCACCCAAGCACGCCTAC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGTGTGGCCTCCAAGGTaGGAAGATAGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEVWPPR*EDRCGP
Trigger: TGGCCCACACCTATCTTCTCACCTTGGAGGCCACAC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASRVVGS*LVSGSL
Trigger: CAAAGACCCTGAGACAAGTCAGGACCCTACTACTCT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCACCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSPDLHV*HPAVSR
Trigger: CCTGCTGACAGCTGGATGTCACACATGAAGGTCTGG...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGGGCTCAACACTCGGTaGGTAGGGATCAAGAGGTTA +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPGLNTR*VGIKRL
Trigger: TAACCTCTTGATCCCTACTCACCGAGTGTTGAGCCC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATTCAATGAAGCTTTGCTaGAAGAATGGCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDSMKLC*KNGCIS
Trigger: TGAGATGCAGCCATTCTTTCAGCAAAGCTTCATTGA...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTGACCTCATGCTCTTaGACAGACTGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSVTSCS*TDCGLP
Trigger: GGGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCAC...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTCTTCCACAGGAAAGTaGCATCGAAGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSSTGK*HRRRPP
Trigger: AGGAGGCCTCCTTCGATGGCACTTTCCTGTGGAAGA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACATCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTTTGATCCTCCTGTATaGTGGGCTGGAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASFDPPV*WAGENR
Trigger: CCTGTTCTCTCCAGCCCAGCATACAGGAGGATCAAA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTGTTTGCTGCTGTCGTaGATGGACGACACCATTGCA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASCLLLS*MDDTIA
Trigger: TGCAATGGTGTCGTCCATGCACGACAGCAGCAAACA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACACCCCAGAATGTTTGCTaGTGTCGTGCATGGACGACA +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTPQNVC*CRAWTT
Trigger: TGTCGTCCATGCACGACAGCAGCAAACATTCTGGGG...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCTTTTCCCCATCCTCTaGATTTCACAATATTCTCAG +
Preference number: 4 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWLFPIL*ISQYSQ
Trigger: CTGAGAATATTGTGAAATGCAGAGGATGGGGAAAAG...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGGTCCTGGCAGACGGTaGGAGGGCACCCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSGPGRR*EGTQRE
Trigger: TTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCACTTCCCCTCTGCATTTaGGGCAGATCTGATCCTCGC +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSLPLCI*GRSDPR
Trigger: GCGAGGATCAGATCTGCCCCAAATGCAGAGGGGAAG...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCGCTCACGGTCCAGCTaGCTCTGGTGGATAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGRSRSS*LWWIEV
Trigger: CACCTCTATCCACCAGAGCCAGCTGGACCGTGAGCG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCAGCTTGCCCAGGGCCTaGTCTTTCTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSSLPRA*SFWARV
Trigger: GACCCTGGCCCAGAAAGACCAGGCCCTGGGCAAGCT...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGGCAGTGTAGAAGGCTaGGGAGAAGAGGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEGSVEG*GEEADG
Trigger: ACCGTCAGCCTCTTCTCCCCAGCCTTCTACACTGCC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGCCATCCTAACCAGATaGCCAGCCCGAAGTCGACCC +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGAILTR*PARSRP
Trigger: GGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTGGAGGCACAGGATGTaGGGGCTGGGTGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNWRHRM*GLGVLL
Trigger: CAGGAGCACACCCAGCCCCCACATCCTGTGCCTCCA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGTGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCC +
Preference number: 4 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTWPFQT*LSTNNS
Trigger: GGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCA...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTGCCACCTGCAAAACTaGTGGCACCACCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPCHLQN*WHHLKL
Trigger: GAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTGGCA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTAACAGCTGTTTCTCATaGGGGCTTGTTCTACAAATC +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPNSCFS*GLVLQI
Trigger: GATTTGTAGAACAAGCCCCCATGAGAAACAGCTGTT...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCTTTGCTGAAAGAATaGCTGCATCTCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPALLKE*LHLMLF
Trigger: AAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTTCACCAGCTGGATCTaGGATTCTGTGCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPFTSWI*DSVLSL
Trigger: TAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGGCCTCACTCTCTGGTaGGTAGGAGCTCTGATGACT +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEGLTLW*VGALMT
Trigger: AGTCATCAGAGCTCCTACTCACCAGAGAGTGAGGCC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTRVVGS*LVSGSL
Trigger: CAAAGACCCTGAGACAAGTCAGGACCCTACTACTCT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCAGAGTAGTAGGGTCCTaGCTTGTCTCAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSRVVGS*LVSGSL
Trigger: CAAAGACCCTGAGACAAGTCAGGACCCTACTACTCT...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGGGTTTCTGACCCATTaGGACTGCCGTGCCACGATG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGGFLTH*DCRATM
Trigger: CATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGCTGGCCTGGGTTTCTaGCCCATTGAGACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNAGLGF*PIETAV
Trigger: CACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGCTCATTTCCTCCACTaGACTAAGAGTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LNVSRTPVALGLTWARRPAHFLH*TKSFLS
Trigger: ACTCAAGAAACTCTTAGTTCAGTGGAGGAAATGAGC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCCCGCCCACCCTAAGTaGTGGTCTCCACAATGCACT +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGPAHPK*WSPQCT
Trigger: AGTGCATTGTGGAGACCAGCACTTAGGGTGGGCGGG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCAATGGCTGCATCTCATaGTCTTTGAAGAGAGTATGT +
Preference number: 4 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSNGCIS*SLKRVC
Trigger: ACATACTCTCTTCAAAGAGCATGAGATGCAGCCATT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGTGTCCAGGTCTCCCTaGCGGCCCTGCAGAGATCTT +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSVSRSP*RPCRDL
Trigger: AAGATCTCTGCAGGGCCGCCAGGGAGACCTGGACAC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCACACCTGCAAAACTGGTaGCACCACCTCAAACTCAGC +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSHLQNW*HHLKLS
Trigger: GCTGAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTG...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACATGCTGCTGTCGTGCATaGACGACACCATTGCACATA +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTCCCRA*TTPLHI
Trigger: TATGTGCAATGGTGTCGTCCATGCACGACAGCAGCA...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTCTCCACAATGCACTTaGGGAACATTGTGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSSPQCT*GTLCRP
Trigger: AGGACGACACAATGTTCCTCAAGTGCATTGTGGAGA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACCCTGGGAGCTCACAGTaGCTGGGTTTCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNPGSSQ*LGFTCM
Trigger: CATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGG...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCTCCGTCACCTCCTTTaGTCCTCCTGTATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSLRHLL*SSCMLG
Trigger: GCCCAGCATACAGGAGGATCAAAGGAGGTGACGGAG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGGGAGAGGCTTCCTCTaGTCTTCAGCTGAAGGACTA +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEGRGFL*SSAEGL
Trigger: TAGTCCTTCAGCTGAAGATCAGAGGAAGCCTCTCCC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAGACCTTCATGTGTaGCATCCAGCTGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLPDLHV*HPAVSR
Trigger: CCTGCTGACAGCTGGATGTCACACATGAAGGTCTGG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCAGTTCTAGGCGCTTTTaGTCTGCTCTGTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSSRRF*SALFGV
Trigger: CACTCCAAACAGAGCAGAGCAAAAGCGCCTAGAACT...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGTGACCTCATGCTCTTaGACAGACTGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLVTSCS*TDCGLP
Trigger: GGGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCAC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTTGGGAGGTGACCTCATaGTCTTGCACAGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGWEVTS*SCTDCG
Trigger: CCCACAGTCTGTGCAAGAGCATGAGGTCACCTCCCA...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTCCTTCTGGACCCTTTaGCTTTGTGGGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNSFWTL*LCGPSP
Trigger: TGGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGCCTCTGATGCCACCTaGAAAACTGGTGGCACCACC +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNASDAT*KTGGTT
Trigger: GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCACAGGCGGGCAGTATTaGCCAGGCTTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSTGGQY*PGFSLQ
Trigger: CTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGT...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACACCAGAGTGCACATCTTaGCTTTCTCCCTTCAATGTC +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTPECTS*LSPFNV
Trigger: GACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGG...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAATGGGCTGTAAGATTCTaGGACCCTATCTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEWAVRF*DPILPG
Trigger: CCCAGGCAAGATAGGGTCCCAGAATCTTACAGCCCA...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCTGAAGGCTTCCTGGTaGAAATCCCCAGGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGLKASW*KSPGCW
Trigger: CCAACACCCTGGGGATTTCCACCAGGAAGCCTTCAG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTGGCCTTTTCAAACCTaGCTCAGTACAAACAACTCC +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASWPFQT*LSTNNS
Trigger: GGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGGCTTAGAGCCCAGCTaGCCTGGGTTTCTGACCCAT +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSGLEPS*PGFLTH
Trigger: ATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGTTCAACGTCACAGCTaGGTCACAGCAGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNVQRHS*VTAGME
Trigger: CTCCATCCCTGCTGTGACTCAGCTGTGACGTTGAAC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR TCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCATCTCCACAATGCACTTaGGGAACATTGTGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSSPQCT*GTLCRP
Trigger: AGGACGACACAATGTTCCTCAAGTGCATTGTGGAGA...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGACGTGGTGTTTAGCTaGTGGAGGCACAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNDVVFS*WRHRMW
Trigger: CCACATCCTGTGCCTCCATCAGCTAAACACCACGTC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTCAATGAAGCTTTGCTaGAAGAATGGCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASSMKLC*KNGCIS
Trigger: TGAGATGCAGCCATTCTTTCAGCAAAGCTTCATTGA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCAGGTGCAGGTGTCAATaGAGCTTTGCTGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPRCRCQ*SFAERM
Trigger: CATTCTTTCAGCAAAGCTTCATTGACACCTGCACCT...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCTGGGAGGTGACCTCATaGTCTTGCACAGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSWEVTS*SCTDCG
Trigger: CCCACAGTCTGTGCAAGAGCATGAGGTCACCTCCCA...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTTCTTCCACAGGAAAGTaGCATCGAAGGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGSSTGK*HRRRPP
Trigger: AGGAGGCCTCCTTCGATGGCACTTTCCTGTGGAAGA...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGGGTTCTCTTTCCAGTaGCATCTCCATTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSGFSFQ*HLHSGT
Trigger: TGTACCTGAATGGAGATGGCACTGGAAAGAGAACCC...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACCGAGCCTGGACAGACTaGATTCAAACTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNRAWTD*IQTGTP
Trigger: TGGGGTGCCAGTTTGAATGCAGTCTGTCCAGGCTCG...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACCAGCCCCAGAATGTTTaGTGCTGTCGTGCATGGACG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNQPQNV*CCRAWT
Trigger: CGTCCATGCACGACAGCAGCAAACATTCTGGGGCTG...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACAACAGCAGGTTTAGGTaGGAGGTCTGGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNNSRFR*EVWEVT
Trigger: GGTCACCTCCCAGACCTCCCACCTAAACCTGCTGTT...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACACATTCGGGGCCGGAGTaGCTCACTGGCCTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTHSGPE*LTGLPV
Trigger: CACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATG...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp CTACTGACCCATTTTTATAGAAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCACAGGCTCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLTHFYRSNPND*SNGVWHRLSRW
Trigger: CCACCTGCTGAGCCTGTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCTCCACCTCCTTGTTaGGGACAGCAACAATGTTCT +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLPPPPC*GQQQCS
Trigger: AGAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCAGGACAGGAAGCTCCTaGATGTTTCCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSRTGSS*MFPEPL
Trigger: CAGGGGTTCTGGAAACATTCAGGAGCTTCCTGTCCT...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCTCAATGAAGCTTTGCTaGAAGAATGGCTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPSMKLC*KNGCIS
Trigger: TGAGATGCAGCCATTCTTTCAGCAAAGCTTCATTGA...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGCTCATTTCCTCCACTaGACTAAGAGTTTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTAHFLH*TKSFLS
Trigger: ACTCAAGAAACTCTTAGTTCAGTGGAGGAAATGAGC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGGAGGTCTTCCCCTCTaGATTTGGGGCAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNGGLPL*IWGRSD
Trigger: ATCAGATCTGCCCCAAATGCAGAGGGGAAGACCTCC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR GCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAATTTGGGGTTATACATTaGTCAGTGGCTTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEFGVIH*SVAWRS
Trigger: GGACCTCCAAGCCACTGAGCAATGTATAACCCCAAA...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTTGTTTGCTGCTGTCGTaGATGGACGACACCATTGCA +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGCLLLS*MDDTIA
Trigger: TGCAATGGTGTCGTCCATGCACGACAGCAGCAAACA...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCCCCAGAATGTTTGCTaGTGTCGTGCATGGACGACA +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSPQNVC*CRAWTT
Trigger: TGTCGTCCATGCACGACAGCAGCAAACATTCTGGGG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGGTGTTACGGGATTCTaGAAAGCACCAAAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSGVTGF*KAPKVG
Trigger: CCCCACCTTTGGTGCTTTCCAGAATCCCGTAACACC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCTGCCACCTGCAAAACTaGTGGCACCACCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSCHLQN*WHHLKL
Trigger: GAGTTTGAGGTGGTGCCACCAGTTTTGCAGGTGGCA...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCGCTTTGCTGAAAGAATaGCTGCATCTCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSALLKE*LHLMLF
Trigger: AAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGC...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCTTTGCTGAAAGAATaGCTGCATCTCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPALLKE*LHLMLF
Trigger: AAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGGGAGGTCTGGGAGGTaGCCTCATGCTCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTGRSGR*PHALAQ
Trigger: CTGTGCAAGAGCATGAGGTCACCTCCCAGACCTCCC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTCTCCACAATGCACTTaGGGAACATTGTGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLSPQCT*GTLCRP
Trigger: AGGACGACACAATGTTCCTCAAGTGCATTGTGGAGA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGCTGGCCTGGGTTTCTaGCCCATTGAGACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTAGLGF*PIETAV
Trigger: CACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAAGGTGCAGGTGTCAATaGAGCTTTGCTGAAAGAATG +
Preference number: 4 (lower is better)
Translates to: WGYTLLSGLEVLISLLKERCRCQ*SFAERM
Trigger: CATTCTTTCAGCAAAGCTTCATTGACACCTGCACCT...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAACGGCTGCCTGCAGCTaGAGGTCTGACAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTTAACS*RSDRFC
Trigger: GCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAACTTCCACGGCTGCCTaGAGCTGCAGGTCTGACAGG +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTTSTAA*SCRSDR
Trigger: CCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGGGTTCTCTTTCCAGTaGCATCTCCATTCAGGTACA +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLGFSFQ*HLHSGT
Trigger: TGTACCTGAATGGAGATGGCACTGGAAAGAGAACCC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGTCACTTCCTCACAGTaGGTTCTGATGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGVTSSQ*VLMTPS
Trigger: AGATGGAGTCATCAGAACCCACTGTGAGGAAGTGAC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTCTCTCTGGCTTGTGTaGTTCAACGTCACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNSLWLV*FNVTAE
Trigger: CTCAGCTGTGACGTTGAACCACACAAGCCAGAGAGA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCATGAAGAGCGACAGATaGGTTCTCTTTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLMKSDR*VLFPVP
Trigger: TGGCACTGGAAAGAGAACCCATCTGTCGCTCTTCAT...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTCCTCAAACTCAGCAATaGCCTTTTCAAACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGPQTQQ*PFQTWL
Trigger: GAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGG...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACAGTTCTAGGCGCTTTTaGTCTGCTCTGTTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNSSRRF*SALFGV
Trigger: CACTCCAAACAGAGCAGAGCAAAAGCGCCTAGAACT...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTATACATTGCTCAGTaGCTTGGAGGTCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLLYIAQ*LGGPDQ
Trigger: CTGATCAGGACCTCCAAGCCACTGAGCAATGTATAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTCACCAGCTGGATCTaGGATTCTGTGCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLFTSWI*DSVLSL
Trigger: TAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp CAGAATGTTTGCTGCTGTCGTGCATGGACGACACCATaGCACATAAAAGCACTAGTGCTCCATTATTGCAGT +
Preference number: 4 (lower is better)
Translates to: QNVCCCRAWTTP*HIKALVLHYCS
Trigger: ACTGCAATAATGGAGCACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGCACGACAGCAGCAAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTTCTTCTCATTTGGTaGGAGTCCACCTCAACATTC +
Preference number: 4 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLFLLIW*ESTSTF
Trigger: GAATGTTGAGGTGGACTCTCACCAAATGAGAAGAAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATCTGGGACCCTATCTTaGCTGGGACTGAGGCAACCA +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTSGTLS*LGLRQP
Trigger: TGGTTGCCTCAGTCCCAGGCAAGATAGGGTCCCAGA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAAACAGCAGGTTTAGGTaGGAGGTCTGGGAGGTGACC +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTNSRFR*EVWEVT
Trigger: GGTCACCTCCCAGACCTCCCACCTAAACCTGCTGTT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCTTATACATTGCTCAGTaGCTTGGAGGTCCTGATCAG +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSLYIAQ*LGGPDQ
Trigger: CTGATCAGGACCTCCAAGCCACTGAGCAATGTATAA...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACTTCACCAGCTGGATCTaGGATTCTGTGCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNFTSWI*DSVLSL
Trigger: TAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAA...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp CGAACACAGTTAACAGGTGCAGGTGTCAATGAAGCTTaGCTGAAAGAATGGCTGCATCTCATGCTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RTQLTGAGVNEA*LKEWLHLMLFE
Trigger: TTCAAAGAGCATGAGATGCAGCCATTCTTTCAGCAAAGCTTCATTGACACCTGCACCTGTTAACTGTGTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAAGGACAGGAAGCTCCTaGATGTTTCCAGAACCCCTG +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTRTGSS*MFPEPL
Trigger: CAGGGGTTCTGGAAACATTCAGGAGCTTCCTGTCCT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATCGACCCCTCAGTCTTaGTTGGATCATGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTSTPQS*LDHASL
Trigger: AAGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTAATGGCTGCATCTCATaGTCTTTGAAGAGAGTATGT +
Preference number: 4 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGNGCIS*SLKRVC
Trigger: ACATACTCTCTTCAAAGAGCATGAGATGCAGCCATT...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAACCAGGTCAGTCCAGTaGGGGTTACTGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTTRSVQ*GLLKVS
Trigger: ACTCACCTTCAGTAACCCCCACTGGACTGACCTGGT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCAACAGCTGTTTCTCATaGGGGCTTGTTCTACAAATC +
Preference number: 4 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSNSCFS*GLVLQI
Trigger: GATTTGTAGAACAAGCCCCCATGAGAAACAGCTGTT...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR TCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATGGGTTTCACCTGCATaGAGTGACGTGGTGTTTAGC +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTWVSPA*SDVVFS
Trigger: GCTAAACACCACGTCACTTCATGCAGGTGAAACCCA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
3UTR CAA 72 bp AAATTATTTCTTTGGGGTTATACATTGCTCAGTGGCTaGGAGGTCCTGATCAGTCTGCTGAAAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: KLFLWGYTLLSG*EVLISLLKEVD
Trigger: ATCCACTTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCAAAGAAATAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATTCTTGAGTCCAGAGTaGACATCTTGCCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTFLSPE*TSCLSP
Trigger: GGGAGAAAGGCAAGATGTGCACTCTGGACTCAAGAA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACAATGATCTACTTATCTaGTCATTTCCTCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNNDLLI*SFPPLN
Trigger: GTTCAGTGGAGGAAATGAGCAGATAAGTAGATCATT...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAATGAAGAGCGACAGATaGGTTCTCTTTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTMKSDR*VLFPVP
Trigger: TGGCACTGGAAAGAGAACCCATCTGTCGCTCTTCAT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR GCA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAAATGATCTACTTATCTaGTCATTTCCTCCACTGAAC +
Preference number: 4 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTNDLLI*SFPPLN
Trigger: GTTCAGTGGAGGAAATGAGCAGATAAGTAGATCATT...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS GCA 90 bp CCCGCCACTTCCACGGCTGCCTGCAGCTGCAGGTCTGACAGGTTCTaGTCCAGGGCCATGGGCCCAGACTCCAGGCCACAGCCCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PATSTAACSCRSDRF*SRAMGPDSRPQPSR
Trigger: CCGGCTGGGCTGTGGCCTGGAGTCTGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGTGGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS TCA 90 bp CTCCAGGTCCCCCGCCACTTCCACGGCTGCCTGCAGCTGCAGGTCTaGCAGGTTCTGCTCCAGGGCCATGGGCCCAGACTCCAGGCCACA +
Preference number: 5 (lower is better)
Translates to: LQVPRHFHGCLQLQV*QVLLQGHGPRLQAT
Trigger: TGTGGCCTGGAGTCTGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGTGGCGGGGGACCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS GCA 90 bp CAATCGACCTCCAGGTCCCCCGCCACTTCCACGGCTGCCTGCAGCTaGAGGTCTGACAGGTTCTGCTCCAGGGCCATGGGCCCAGACTCC +
Preference number: 5 (lower is better)
Translates to: QSTSRSPATSTAACS*RSDRFCSRAMGPDS
Trigger: GGAGTCTGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGAAGTGGCGGGGGACCTGGAGGTCGATTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAGGCAGGGGACCAGCCTaGTGGAGTCCTGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGGRGPA*WSPGLG
Trigger: GCCCAGGCCAGGACTCCACAAGGCTGGTCCCCTGCC...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 90 bp GGGTGCCAAGGGCAGGGCATCACAGTCCTCTGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGAGCCCCGCCCACCCTAAGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: GCQGQGITVLWLAPF*VGAPSGAPPTLSAG
Trigger: ACCAGCACTTAGGGTGGGCGGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCAGAGGACTGTGATGCCCTGCCCTTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS GCA 90 bp ACCCAAAGGGAAACTCATTCTCATCAGGGGCCGGGCGAGGACTGCTaGCTGAGCTGGAGGCCATCTCAGGGTTCCAGGCTGGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TQRETHSHQGPGEDC*LSWRPSQGSRLARG
Trigger: CCCTCTGGCCAGCCTGGAACCCTGAGATGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGGCCCCTGATGAGAATGAGTTTCCCTTTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS GCA 90 bp AGGAAAGTGCCATCGAAGGAGGCCTCCTCCATGAGGCGCAAGCTCTaGTCCAGCTTGCCCAGGGCCTGGTCTTTCTGGGCCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RKVPSKEASSMRRKL*SSLPRAWSFWARVC
Trigger: GCAGACCCTGGCCCAGAAAGACCAGGCCCTGGGCAAGCTGGAGCAGAGCTTGCGCCTCATGGAGGAGGCCTCCTTCGATGGCACTTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 90 bp CCAAGGGCAGGGCATCACAGTCCTCTGGCTAGCTCCCTTCTGAGTTaGAGCTCCCTCAGGAGCCCCGCCCACCCTAAGTGCTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: PRAGHHSPLASSLLS*SSLRSPAHPKCWSP
Trigger: TGGAGACCAGCACTTAGGGTGGGCGGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCAGAGGACTGTGATGCCCTGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSPRPAILTRWPARSRPLVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCGAGGGCCTGTTTAAGTaGCTCCAGGGCAGGGGACCA +
Preference number: 5 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCEGLFK*LQGRGP
Trigger: TGGTCCCCTGCCCTGGAGCAACTTAAACAGGCCCTC...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGAGGCCTCCACCTCCTaGTTGAGGACAGCAACAATG +
Preference number: 5 (lower is better)
Translates to: PSPRPAILTRWPARSRPLEASTS*LRTATM
Trigger: CATTGTTGCTGTCCTCAACAAGGAGGTGGAGGCCTC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLDPLP*WAQPTS
Trigger: GGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGCGAGAGCTTCTCTGCTaGGGTCCTACGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWRELLC*GPTVPS
Trigger: GCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCG...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGCCGTCTGGGTTTGCTaGTTCACCTCCAATGACGAG +
Preference number: 5 (lower is better)
Translates to: PSPRPAILTRWPARSRPLAVWVC*FTSNDE
Trigger: CTCGTCATTGGAGGTGAACAAGCAAACCCAGACGGC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGGCAGCCCCAGAATGTTaGCTGCTGTCGTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWAAPEC*LLSCMD
Trigger: GTCCATGCACGACAGCAGCAAACATTCTGGGGCTGC...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCAGCATGAAGGTGACCTaGTTCCGGAAGGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: VPASMPASDATCKTGGTTSMKVT*FRKGHG
Trigger: GCCGTGGCCCTTCCGGAACAAGGTCACCTTCATGCT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTCATCCACTGGCCACGTaGGTTTCACTCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AGSIAQASLSSLSCVASPHPLAT*VSLWGL
Trigger: GAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGATG...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACCTCAACATTCGGGGCCGGAGTGGCTCACTGGCCTCCCAGTGTCGCATGGAGGGTCTTTGGAAAGTaGGGTGTGGCCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: STSTFGAGVAHWPPSVAWRVFGK*GVASKV
Trigger: CACCTTGGAGGCCACACCCAACTTTCCAAAGACCCT...CCATGCGACACTGGGAGGCCAGTGAGCCACTCCGGCCCCGAATGTTGAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS TCA 90 bp CAAAGGGGCACCCAATTCCAGCCTCAGCCACCTCGGGGTGAGCTGTaGTCCTGGGCAGCACTGCTATTTCTCCTGTCAGGGCACAGTCCA +
Preference number: 5 (lower is better)
Translates to: QRGTQFQPQPPRGEL*SWAALLFLLSGHSP
Trigger: TGGACTGTGCCCTGACAGGAGAAATAGCAGTGCTGCCCAGGATCACAGCTCACCCCGAGGTGGCTGAGGCTGGAATTGGGTGCCCCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546084.5
CDS CCA 90 bp GAGAGACAGCCTGCACAGCAGAGAGCCCTGGGCTCCTTTGGGTCCTaGCAGACGGTGGGAGGGCACCCAAAGGGAAACTCATTCTCATCA +
Preference number: 5 (lower is better)
Translates to: ERQPAQQRALGSFGS*QTVGGHPKGNSFSS
Trigger: TGATGAGAATGAGTTTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CCA 90 bp GTTCTCAGAGAGACAGCCTGCACAGCAGAGAGCCCTGGGCTCCTTTaGGTCCTGGCAGACGGTGGGAGGGCACCCAAAGGGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: VLRETACTAESPGLL*VLADGGRAPKGKLI
Trigger: AATGAGTTTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTCTCTGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCCTTCTTCTCTCTGGCTaGTGTGGTTCAACGTCACAG +
Preference number: 5 (lower is better)
Translates to: PSPRPAILTRWPARSRPLLLLSG*CGSTSQ
Trigger: CTGTGACGTTGAACCACACAAGCCAGAGAGAAGAAG...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCATCCACTGGCCACGTaGGTTTCACTCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPHPLAT*VSLWGL
Trigger: GAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGATG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTCTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPLDPLP*WAQPTS
Trigger: GGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCGTGGCATCTCCTTaGAGGGTCAGAGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VPASMPASDATCKTGGTTCVASP*RVREAR
Trigger: CCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGCA...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGACAGGCGGGCAGTATaGCCCAGGCTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: STVSAATLSAVGTIKSSPDRRAV*PRLLSP
Trigger: TGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCGACAGGCGGGCAGTATaGCCCAGGCTTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSDRRAV*PRLLSP
Trigger: TGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTC...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGACTGTGGGCTTCCCTaGAAGGAGCAGCCGACACCT +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPDCGLP*KEQPTP
Trigger: AGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGTC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTAGCATGAAGGTGACCTaGTTCCGGAAGGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPSMKVT*FRKGHG
Trigger: GCCGTGGCCCTTCCGGAACAAGGTCACCTTCATGCT...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACGAGAGCTTCTCTGCTaGGGTCCTACGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKRELLC*GPTVPS
Trigger: GCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GCCAGGCTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCACATTGCTCAGTGGCTaGGAGGTCCTGATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ARLRAQLAWVSDPLRLPCTLLSG*EVLISL
Trigger: CAGACTGATCAGGACCTCCAAGCCACTGAGCAATGT...GCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAGCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGAGGGTCTTTGGAAAGTaGGGTGTGGCCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWRVFGK*GVASKV
Trigger: CACCTTGGAGGCCACACCCAACTTTCCAAAGACCCT...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGCAGCCCCAGAATGTTaGCTGCTGTCGTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDAAPEC*LLSCMD
Trigger: GTCCATGCACGACAGCAGCAAACATTCTGGGGCTGC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS TCA 90 bp CTCAGGAGCCCCGCCCACCCTAAGTGCTGGTCTCCACAATGCACTTaGGGAACATTGTGTCGTCCTTCACGTAGGCGTGCTTGGGTGACT +
Preference number: 5 (lower is better)
Translates to: LRSPAHPKCWSPQCT*GTLCRPSRRRAWVT
Trigger: AGTCACCCAAGCACGCCTACGTGAAGGACGACACAATGTTCCTCAAGTGCATTGTGGAGACCAGCACTTAGGGTGGGCGGGGCTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGACTGTGGGCTTCCCTaGAAGGAGCAGCCGACACCT +
Preference number: 5 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPDCGLP*KEQPTP
Trigger: AGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGTC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGGCCTCCACCTCCTTGTaGAGGACAGCAACAATGTTC +
Preference number: 5 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWASTSL*RTATMF
Trigger: GAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGGC...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCCACCGCCTGGTGACATaGGTGATCTTCCACAGGAAA +
Preference number: 5 (lower is better)
Translates to: VPASMPASDATCKTGGTTHRLVT*VIFHRK
Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAGGCGGTG...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGTTGGGTGACTGCAGTTaGCTGAGGGGGAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWLGDCS*LRGKKS
Trigger: ACTCTTCTTCCCCCTCAGCAAACTGCAGTCACCCAA...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSTPQSC*DHASLH
Trigger: GTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCCTGGACCCTTTGCCTTaGTGGGCCCAGCCCACGTCC +
Preference number: 5 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPLDPLP*WAQPTS
Trigger: GGACGTGGGCTGGGCCCACAAAGGCAAAGGGTCCAG...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCTGGGTTTCTGACCCATaGAGACTGCCGTGCCACGAT +
Preference number: 5 (lower is better)
Translates to: STVSAATLSAVGTIKSSPWVSDP*RLPCHD
Trigger: ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCA...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCAGCCCACGTCCTGCCATCCTAACCAGATGGCCAGCCCGAAGTCGACCCCTCGGGATCAAGAGGTTATaGCTAGGACATCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: PSPRPAILTRWPARSRPLGIKRL*LGHQFQ
Trigger: CTGAAACTGATGTCCTAGCAATAACCTCTTGATCCC...GAGGGGTCGACTTCGGGCTGGCCATCTGGTTAGGATGGCAGGACGTGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGGCAGGGGACCAGCCTaGTGGAGTCCTGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLGRGPA*WSPGLG
Trigger: GCCCAGGCCAGGACTCCACAAGGCTGGTCCCCTGCC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp AGACCCTGCCCTCAGCCAAGACAGCTCTCCGTTTTCAAGTCGGTACTCTTCCCTGGTGACCTCATGCTCTaGCACAGACTGTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RPCPQPRQLSVFKSVLFPGDLML*HRLWAS
Trigger: GGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCACC...AGGGAAGAGTACCGACTTGAAAACGGAGAGCTGTCTTGGCTGAGGGCAGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTGCCTCCACCTCCTTGTaGAGGACAGCAACAATGTTC +
Preference number: 5 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPASTSL*RTATMF
Trigger: GAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGGC...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTCACCGCCTGGTGACATaGGTGATCTTCCACAGGAAA +
Preference number: 5 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPHRLVT*VIFHRK
Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAGGCGGTG...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGGTCTCCACAATGCACTaGAGGAACATTGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWVSTMH*RNIVSS
Trigger: GGACGACACAATGTTCCTCAAGTGCATTGTGGAGAC...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPTPQSC*DHASLH
Trigger: GTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGCCGTCTGGGTTTGCTaGTTCACCTCCAATGACGAG +
Preference number: 5 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTAVWVC*FTSNDE
Trigger: CTCGTCATTGGAGGTGAACAAGCAAACCCAGACGGC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGTGTGCTCCTGCGTGTaGGGGAAGCTGAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTVCSCV*GKLSCQ
Trigger: CTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACAC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATACATTGCTCAGTGGCTaGGAGGTCCTGATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDTLLSG*EVLISL
Trigger: CAGACTGATCAGGACCTCCAAGCCACTGAGCAATGT...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGAGGGTCTTTGGAAAGTaGGGTGTGGCCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTRVFGK*GVASKV
Trigger: CACCTTGGAGGCCACACCCAACTTTCCAAAGACCCT...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: VPASMPASDATCKTGGTTSNPND*SNGVWH
Trigger: GTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCT...GGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGAGCATGGACGACACCATaGCACATAAAAGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGAWTTP*HIKALV
Trigger: CACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGC...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCCTGCAGAGATCTTCCTAGCCCGAGAGCTTCTCTGCTTGGGTCCTACGGTTCCCTTCTTCTCTCTGGCTaGTGTGGTTCAACGTCACAG +
Preference number: 5 (lower is better)
Translates to: PCRDLPSPRASLLGSYGSLLLSG*CGSTSQ
Trigger: CTGTGACGTTGAACCACACAAGCCAGAGAGAAGAAG...GGAACCGTAGGACCCAAGCAGAGAAGCTCTCGGGCTAGGAAGATCTCTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGACTGTGGGCTTCCCTaGAAGGAGCAGCCGACACCT +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTDCGLP*KEQPTP
Trigger: AGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGTC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCACCGCCTGGTGACATaGGTGATCTTCCACAGGAAA +
Preference number: 5 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTHRLVT*VIFHRK
Trigger: TTTCCTGTGGAAGATCACCAATGTCACCAGGCGGTG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTTAGAGCCCAGCTGGCCTGGGTTTCTGACCCATTGAGACTGCCGTGCCACGATGTCTCCACAATGCACTaGAGGAACATTGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: LRAQLAWVSDPLRLPCHDVSTMH*RNIVSS
Trigger: GGACGACACAATGTTCCTCAAGTGCATTGTGGAGAC...ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCAGGCCAGCTGGGCTCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGACCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAAC +
Preference number: 5 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGPFSSH*VRVHLN
Trigger: GTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGG...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTGTGCTCCTGCGTGTaGGGGAAGCTGAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSVCSCV*GKLSCQ
Trigger: CTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACAC...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTCCACTGCCTCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAACTTTGGGGTTATACATaGCTCAGTGGCTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LHCLHSLRCHAVSRGNNKLWGYT*LSGLEV
Trigger: GACCTCCAAGCCACTGAGCAATGTATAACCCCAAAG...TTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGAGGCAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCTGCGTGGCATCTCCTTaGAGGGTCAGAGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASCVASP*RVREAR
Trigger: CCTGGCTTCTCTGACCCTCAAAGGAGATGCCACGCA...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGCTTGTCTCAGGGTCTTaGGAAAGTTGGGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTLVSGS*ESWVWP
Trigger: AGGCCACACCCAACTTTCCAAAGACCCTGAGACAAG...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TTCCTGCCAGCATGCCAGCCTCTGATGCCACCTGCAAAACTGGTGGCACCACCTAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: FLPACQPLMPPAKLVAPPSNPND*SNGVWH
Trigger: GTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCT...AGGTGGTGCCACCAGTTTTGCAGGTGGCATCAGAGGCTGGCATGCTGGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCATCTCCTGCATGGACGACACCATaGCACATAAAAGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: AGSIAQASLSSLSCVASPAWTTP*HIKALV
Trigger: CACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGC...AGGAGATGCCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGGTGACCTCATGCTCTaGCACAGACTGTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPGDLML*HRLWAS
Trigger: GGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCACC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCAGCCTTCACCCATCTTaGTGCCCTGAGGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASSLHPS*CPEVLG
Trigger: ACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CATGACAGGCGGGCAGTATTGCCCAGGCTTCTCTCTCCAGTCTGTCCTGCGTGGCCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAAC +
Preference number: 5 (lower is better)
Translates to: HDRRAVLPRLLSPVCPAWPFSSH*VRVHLN
Trigger: GTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGG...CCACGCAGGACAGACTGGAGAGAGAAGCCTGGGCAATACTGCCCGCCTGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCACTAGTGCTCCATTATaGCAGTTGGGCCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: STVSAATLSAVGTIKSSPTSAPL*QLGLLK
Trigger: TTTCAGGAGGCCCAACTGCAATAATGGAGCACTAGT...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCTCCTTCTGGACCCTTaGCCTTTGTGGGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLLLLDP*PLWAQP
Trigger: GGGCTGGGCCCACAAAGGCAAAGGGTCCAGAAGGAG...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAATGCCCCTCTTCTTCTaGAGGTGCCTCTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSMPLFF*RCLWLH
Trigger: GTGCAGCCAGAGGCACCTCAAGAAGAAGAGGGGCAT...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCACATTGCTCAGTGGCTaGGAGGTCCTGATCAGTCTG +
Preference number: 5 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASTLLSG*EVLISL
Trigger: CAGACTGATCAGGACCTCCAAGCCACTGAGCAATGT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACATGGGTTTCTGACCCATaGAGACTGCCGTGCCACGAT +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTWVSDP*RLPCHD
Trigger: ATCGTGGCACGGCAGTCTCAATGGGTCAGAAACCCA...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CCAGTGTCGCATGGTCCGTGCAGAGGGGAGCAGCTCTGCCTGTCTCCTTCTGGATGCATCTCATGCTCTTaGAAGAGAGTATGTATCTCT +
Preference number: 5 (lower is better)
Translates to: PVSHGPCRGEQLCLSPSGCISCS*KRVCIS
Trigger: AGAGATACATACTCTCTTCAAAGAGCATGAGATGCA...TCCAGAAGGAGACAGGCAGAGCTGCTCCCCTCTGCACGGACCATGCGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCACAGTCTCCGCTGCCACGCTGTCAGCCGTGGGAACAATAAAAAGCAGCCCCGGTGTCAATGAAGCTTaGCTGAAAGAATGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: STVSAATLSAVGTIKSSPGVNEA*LKEWLH
Trigger: ATGCAGCCATTCTTTCAGCAAAGCTTCATTGACACC...GGGGCTGCTTTTTATTGTTCCCACGGCTGACAGCGTGGCAGCGGAGACTGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGCCTCCACCTCCTTGTaGAGGACAGCAACAATGTTC +
Preference number: 5 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPASTSL*RTATMF
Trigger: GAACATTGTTGCTGTCCTCAACAAGGAGGTGGAGGC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGAGGCCTCCACCTCCTaGTTGAGGACAGCAACAATG +
Preference number: 5 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSEASTS*LRTATM
Trigger: CATTGTTGCTGTCCTCAACAAGGAGGTGGAGGCCTC...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCAGCATGAAGGTGACCTaGTTCCGGAAGGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLSMKVT*FRKGHG
Trigger: GCCGTGGCCCTTCCGGAACAAGGTCACCTTCATGCT...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTTGGGTGACTGCAGTTaGCTGAGGGGGAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSLGDCS*LRGKKS
Trigger: ACTCTTCTTCCCCCTCAGCAAACTGCAGTCACCCAA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTCCATTTTCTTCTCATTaGGTGAGAGTCCACCTCAAC +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPPFSSH*VRVHLN
Trigger: GTTGAGGTGGACTCTCACCAAATGAGAAGAAAATGG...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGTGTGCTCCTGCGTGTaGGGGAAGCTGAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSVCSCV*GKLSCQ
Trigger: CTGGCAGCTCAGCTTCCCCAACACGCAGGAGCACAC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGGGATCAAGAGGTTATaGCTAGGACATCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPGIKRL*LGHQFQ
Trigger: CTGAAACTGATGTCCTAGCAATAACCTCTTGATCCC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTTCTGGGACCCTATCTaGCCTGGGACTGAGGCAACC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLFWDPI*PGTEAT
Trigger: GGTTGCCTCAGTCCCAGGCAAGATAGGGTCCCAGAA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS-3UTR CAA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGAGGGCCTGTTTAAGTaGCTCCAGGGCAGGGGACCA +
Preference number: 5 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNEGLFK*LQGRGP
Trigger: TGGTCCCCTGCCCTGGAGCAACTTAAACAGGCCCTC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS-3UTR CAA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACCATCCACTGGCCACGTaGGTTTCACTCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNHPLAT*VSLWGL
Trigger: GAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGATG...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CAAAACTGGTGGCACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCACTTGTCTCAGGGTCTTaGGAAAGTTGGGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: QNWWHHLKLSNGLFKPGSLVSGS*ESWVWP
Trigger: AGGCCACACCCAACTTTCCAAAGACCCTGAGACAAG...TGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGTGCCACCAGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAAGCAACCCTAACGATTaGAGCAATGGAGTCTGGCAC +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTSNPND*SNGVWH
Trigger: GTGCCAGACTCCATTGCTCAAATCGTTAGGGTTGCT...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCACTAGTGCTCCATTATaGCAGTTGGGCCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASTSAPL*QLGLLK
Trigger: TTTCAGGAGGCCCAACTGCAATAATGGAGCACTAGT...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCGCAGCCCCAGAATGTTaGCTGCTGTCGTGCATGGAC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLAAPEC*LLSCMD
Trigger: GTCCATGCACGACAGCAGCAAACATTCTGGGGCTGC...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTGAGGCCTCCACCTCCTaGTTGAGGACAGCAACAATG +
Preference number: 5 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGEASTS*LRTATM
Trigger: CATTGTTGCTGTCCTCAACAAGGAGGTGGAGGCCTC...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCCAGAGTGCACATCTTGCCTTTCTCCCTTCAATGTCGAACACAGTTAACAGGTAGCCTTCACCCATCTTaGTGCCCTGAGGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: SRVHILPFSLQCRTQLTGSLHPS*CPEVLG
Trigger: ACCCAAGACCTCAGGGCACAAAGATGGGTGAAGGCT...ACCTGTTAACTGTGTTCGACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCACCCCTCAGTCTTGCTaGGATCATGCCAGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLTPQSC*DHASLH
Trigger: GTGAAGGCTGGCATGATCCAAGCAAGACTGAGGGGT...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCGAGAGCTTCTCTGCTaGGGTCCTACGGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSRELLC*GPTVPS
Trigger: GCTTGGAACCGTAGGACCCAAGCAGAGAAGCTCTCG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGCTCCATTATTGCAGTaGGGCCTCCTGAAAACCCCT +
Preference number: 5 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEAPLLQ*GLLKTP
Trigger: AGGGGTTTTCAGGAGGCCCAACTGCAATAATGGAGC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GTGACTGGGTTTCACCTGCATGAAGTGACGTGGTGTTTAGCTGATGGAGGCACAGCATGGACGACACCATaGCACATAAAAGCACTAGTG +
Preference number: 5 (lower is better)
Translates to: VTGFHLHEVTWCLADGGTAWTTP*HIKALV
Trigger: CACTAGTGCTTTTATGTGCAATGGTGTCGTCCATGC...TGTGCCTCCATCAGCTAAACACCACGTCACTTCATGCAGGTGAAACCCAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTGAATGTTTCCAGAACCCCTGTAGCTCTAGGACTCACCTGGGCCAGGAGGCCTGAGAGTATGTATCTCTaGCCATCAGAAATAGGCAAT +
Preference number: 5 (lower is better)
Translates to: LNVSRTPVALGLTWARRPESMYL*PSEIGN
Trigger: ATTGCCTATTTCTGATGGCAAGAGATACATACTCTC...AGGCCTCCTGGCCCAGGTGAGTCCTAGAGCTACAGGGGTTCTGGAAACATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCTGGCTGCACCTGGGAGCTCACAGTGACTGGGTTTCACCTGCATGAAGTGACGGAGAGTATGTATCTCTaGCCATCAGAAATAGGCAAT +
Preference number: 5 (lower is better)
Translates to: SGCTWELTVTGFHLHEVTESMYL*PSEIGN
Trigger: ATTGCCTATTTCTGATGGCAAGAGATACATACTCTC...CGTCACTTCATGCAGGTGAAACCCAGTCACTGTGAGCTCCCAGGTGCAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp AGTAGTAGGGTCCTGACTTGTCTCAGGGTCTTTGGAAAGTTGGGTGTGGCCTCCGGTGTCAATGAAGCTTaGCTGAAAGAATGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: SSRVLTCLRVFGKLGVASGVNEA*LKEWLH
Trigger: ATGCAGCCATTCTTTCAGCAAAGCTTCATTGACACC...GGAGGCCACACCCAACTTTCCAAAGACCCTGAGACAAGTCAGGACCCTACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp CTTCCCTCCTTCACCAGCTGGATCTGGGATTCTGTGCTTTCTCTAAGCTTCTCCTCCAGAGTGCACATCTaGCCTTTCTCCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: LPSFTSWIWDSVLSLSFSSRVHI*PFSLQC
Trigger: ACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA...GGAGAAGCTTAGAGAAAGCACAGAATCCCAGATCCAGCTGGTGAAGGAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGCCGTCTGGGTTTGCTaGTTCACCTCCAATGACGAG +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSAVWVC*FTSNDE
Trigger: CTCGTCATTGGAGGTGAACAAGCAAACCCAGACGGC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAACTTTGGGGTTATACATaGCTCAGTGGCTTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: WGYTLLSGLEVLISLLKELWGYT*LSGLEV
Trigger: GACCTCCAAGCCACTGAGCAATGTATAACCCCAAAG...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACTGCTGCATCTGATGCTGTCTACACTCCAGTTCATCTGACCCTTCTGACTCCCGGTGTCAATGAAGCTTaGCTGAAAGAATGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: TAASDAVYTPVHLTLLTPGVNEA*LKEWLH
Trigger: ATGCAGCCATTCTTTCAGCAAAGCTTCATTGACACC...GGGAGTCAGAAGGGTCAGATGAACTGGAGTGTAGACAGCATCAGATGCAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCCTTGTCTCAGGGTCTTaGGAAAGTTGGGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSLVSGS*ESWVWP
Trigger: AGGCCACACCCAACTTTCCAAAGACCCTGAGACAAG...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGCTCCATTATTGCAGTaGGGCCTCCTGAAAACCCCT +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSAPLLQ*GLLKTP
Trigger: AGGGGTTTTCAGGAGGCCCAACTGCAATAATGGAGC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAACTAGTGCTCCATTATaGCAGTTGGGCCTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: WGYTLLSGLEVLISLLKETSAPL*QLGLLK
Trigger: TTTCAGGAGGCCCAACTGCAATAATGGAGCACTAGT...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCCCAAACGTCTCCACAATGCACTaGAGGAACATTGTGTCGTCC +
Preference number: 5 (lower is better)
Translates to: SNSAMAFSNLAQYKQLPNVSTMH*RNIVSS
Trigger: GGACGACACAATGTTCCTCAAGTGCATTGTGGAGAC...GTTTGGGAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp ACCACCTCAAACTCAGCAATGGCCTTTTCAAACCTGGCTCAGTACAAACAACTCTCCAGAGTGCACATCTaGCCTTTCTCCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: TTSNSAMAFSNLAQYKQLSRVHI*PFSLQC
Trigger: ACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA...GAGTTGTTTGTACTGAGCCAGGTTTGAAAAGGCCATTGCTGAGTTTGAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGGTGACCTCATGCTCTaGCACAGACTGTGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTGDLML*HRLWAS
Trigger: GGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCACC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACAGTCGACCCCTCAGTCTaGCTTGGATCATGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTVDPSV*LGSCQP
Trigger: AGGCTGGCATGATCCAAGCAAGACTGAGGGGTCGAC...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCTCCAGAGTGCACATCTaGCCTTTCTCCCTTCAATGT +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSSRVHI*PFSLQC
Trigger: ACATTGAAGGGAGAAAGGCAAGATGTGCACTCTGGA...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAACAGGAAGGGCTACTGACCCATTTTTATAGAAGCAACCCTAACGATTTGAGCGGGATCAAGAGGTTATaGCTAGGACATCAGTTTCAG +
Preference number: 5 (lower is better)
Translates to: EQEGLLTHFYRSNPNDLSGIKRL*LGHQFQ
Trigger: CTGAAACTGATGTCCTAGCAATAACCTCTTGATCCC...GCTCAAATCGTTAGGGTTGCTTCTATAAAAATGGGTCAGTAGCCCTTCCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAAGAGAGTATGTATCTCTaGCCATCAGAAATAGGCAAT +
Preference number: 5 (lower is better)
Translates to: WGYTLLSGLEVLISLLKEESMYL*PSEIGN
Trigger: ATTGCCTATTTCTGATGGCAAGAGATACATACTCTC...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp TGGGGTTATACATTGCTCAGTGGCTTGGAGGTCCTGATCAGTCTGCTGAAAGAATGCATCTCATGCTCTTaGAAGAGAGTATGTATCTCT +
Preference number: 5 (lower is better)
Translates to: WGYTLLSGLEVLISLLKECISCS*KRVCIS
Trigger: AGAGATACATACTCTCTTCAAAGAGCATGAGATGCA...TTCTTTCAGCAGACTGATCAGGACCTCCAAGCCACTGAGCAATGTATAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATTGGGTGACTGCAGTTaGCTGAGGGGGAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTLGDCS*LRGKKS
Trigger: ACTCTTCTTCCCCCTCAGCAAACTGCAGTCACCCAA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS-3UTR CAA 90 bp GAGAGTATGTATCTCTTGCCATCAGAAATAGGCAATCAAAAGTGTAGAGTAACATGCATCTCATGCTCTTaGAAGAGAGTATGTATCTCT +
Preference number: 5 (lower is better)
Translates to: ESMYLLPSEIGNQKCRVTCISCS*KRVCIS
Trigger: AGAGATACATACTCTCTTCAAAGAGCATGAGATGCA...TGTTACTCTACACTTTTGATTGCCTATTTCTGATGGCAAGAGATACATACTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS GCA 72 bp TCCACGGCTGCCTGCAGCTGCAGGTCTGACAGGTTCTaGTCCAGGGCCATGGGCCCAGACTCCAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: STAACSCRSDRF*SRAMGPDSRPQ
Trigger: CTGTGGCCTGGAGTCTGGGCCCATGGCCCTGGAGCAGAACCTGTCAGACCTGCAGCTGCAGGCAGCCGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp GAGACAGCCTGCACAGCAGAGAGCCCTGGGCTCCTTTaGGTCCTGGCAGACGGTGGGAGGGCACCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: ETACTAESPGLL*VLADGGRAPKG
Trigger: CCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CAA 90 bp GGAGGCCATCTCAGGGTTCCAGGCTGGCCAGAGGGCCTGTTTAAGTaGCTCCAGGGCAGGGGACCAGCCTTGTGGAGTCCTGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GGHLRVPGWPEGLFK*LQGRGPALWSPGLG
Trigger: GCCCAGGCCAGGACTCCACAAGGCTGGTCCCCTGCCCTGGAGCAACTTAAACAGGCCCTCTGGCCAGCCTGGAACCCTGAGATGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 72 bp CTCATTCTCATCAGGGGCCGGGCGAGGACTGCTGCCTaGGCTGGAGGCCATCTCAGGGTTCCAGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LILIRGRARTAA*AGGHLRVPGWP
Trigger: TGGCCAGCCTGGAACCCTGAGATGGCCTCCAGCTCAGGCAGCAGTCCTCGCCCGGCCCCTGATGAGAATGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 72 bp GGGCAGGGCATCACAGTCCTCTGGCTAGCTCCCTTCTaGGTTGGAGCTCCCTCAGGAGCCCCGCCCACCCTA +
Preference number: 6 (lower is better)
Translates to: GQGITVLWLAPF*VGAPSGAPPTL
Trigger: TAGGGTGGGCGGGGCTCCTGAGGGAGCTCCAACTCAGAAGGGAGCTAGCCAGAGGACTGTGATGCCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp GGTTCTCAGAGAGACAGCCTGCACAGCAGAGAGCCCTaGGCTCCTTTGGGTCCTGGCAGACGGTGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GSQRDSLHSREP*APLGPGRRWEG
Trigger: GCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTCTCTGAGAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CCA 72 bp CTCTGCTCCAAGCTCAGGATGCGCTCACGGTCCAGCTaGCTCTGGTGGATAGAGGTGGCCAGGGCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LCSKLRMRSRSS*LWWIEVARARW
Trigger: CCACCTGGCCCTGGCCACCTCTATCCACCAGAGCCAGCTGGACCGTGAGCGCATCCTGAGCTTGGAGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CAA 72 bp AGAGACAGCCTGCACAGCAGAGAGCCCTGGGCTCCTTaGGGTCCTGGCAGACGGTGGGAGGGCACCCAAAGG +
Preference number: 6 (lower is better)
Translates to: RDSLHSREPWAP*GPGRRWEGTQR
Trigger: CCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CCA 72 bp CCTGCACAGCAGAGAGCCCTGGGCTCCTTTGGGTCCTaGCAGACGGTGGGAGGGCACCCAAAGGGAAACTCA +
Preference number: 6 (lower is better)
Translates to: PAQQRALGSFGS*QTVGGHPKGNS
Trigger: TGAGTTTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 72 bp CCAGGCCACAGCCCAGCCGGGCCTTCCACTGTTTCATaGACCCCAACAGCAGGTTTAGGTGGGAGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PGHSPAGPSTVS*TPTAGLGGRSG
Trigger: CCCAGACCTCCCACCTAAACCTGCTGTTGGGGTTCATGAAACAGTGGAAGGCCCGGCTGGGCTGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp CATCCACTGGCCACGTTGGTTTCACTCTGGGGCCTCTaGAAGGACGCTGAGCTTAGGTCAGGCCGGAAGGCG +
Preference number: 6 (lower is better)
Translates to: HPLATLVSLWGL*KDAELRSGRKA
Trigger: CGCCTTCCGGCCTGACCTAAGCTCAGCGTCCTTCCAGAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CAA 90 bp GGTTCTCAGAGAGACAGCCTGCACAGCAGAGAGCCCTGGGCTCCTTaGGGTCCTGGCAGACGGTGGGAGGGCACCCAAAGGGAAACTCAT +
Preference number: 6 (lower is better)
Translates to: GSQRDSLHSREPWAP*GPGRRWEGTQRETH
Trigger: ATGAGTTTCCCTTTGGGTGCCCTCCCACCGTCTGCCAGGACCCAAAGGAGCCCAGGGCTCTCTGCTGTGCAGGCTGTCTCTCTGAGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CAA 90 bp CTGACGGTCCTGCCACAGGCCGACTCATGGCACCGCCTGGTGACATaGGTGATCTTCCACAGGAAAGTGCCATCGAAGGAGGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LTVLPQADSWHRLVT*VIFHRKVPSKEASS
Trigger: GGAGGAGGCCTCCTTCGATGGCACTTTCCTGTGGAAGATCACCAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGGCAGGACCGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS GCA 72 bp AGACTGTGGGCTTCCCTTGAAGGAGCAGCCGACACCTaGAAAGGGGCACCCAATTCCAGCCTCAGCCACCTC +
Preference number: 6 (lower is better)
Translates to: RLWASLEGAADT*KGAPNSSLSHL
Trigger: GAGGTGGCTGAGGCTGGAATTGGGTGCCCCTTTGCAGGTGTCGGCTGCTCCTTCAAGGGAAGCCCACAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp GAGAAGAGGCTGACGGTCCTGCCACAGGCCGACTCATaGCACCGCCTGGTGACATTGGTGATCTTCCACAGG +
Preference number: 6 (lower is better)
Translates to: EKRLTVLPQADS*HRLVTLVIFHR
Trigger: CCTGTGGAAGATCACCAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGGCAGGACCGTCAGCCTCTTCTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp AAGAGTGGGCATCCACTGGCCACGTTGGTTTCACTCTaGGGCCTCTGGAAGGACGCTGAGCTTAGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: KSGHPLATLVSL*GLWKDAELRSG
Trigger: GCCTGACCTAAGCTCAGCGTCCTTCCAGAGGCCCCAGAGTGAAACCAACGTGGCCAGTGGATGCCCACTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS TCA 72 bp ACCCCAACAGCAGGTTTAGGTGGGAGGTCTGGGAGGTaGCCTCATGCTCTTGCACAGACTGTGGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: TPTAGLGGRSGR*PHALAQTVGFP
Trigger: AGGGAAGCCCACAGTCTGTGCAAGAGCATGAGGTCACCTCCCAGACCTCCCACCTAAACCTGCTGTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CAA 72 bp CTGCCACAGGCCGACTCATGGCACCGCCTGGTGACATaGGTGATCTTCCACAGGAAAGTGCCATCGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LPQADSWHRLVT*VIFHRKVPSKE
Trigger: CTCCTTCGATGGCACTTTCCTGTGGAAGATCACCAATGTCACCAGGCGGTGCCATGAGTCGGCCTGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CAA 90 bp GTTGCAACAGGTGGCCTCTGGGCTGTAAGATTCTGGGACCCTATCTaGCCTGGGACTGAGGCAACCAGAAGGAGCAGGAAAGCCCTGATG +
Preference number: 6 (lower is better)
Translates to: VATGGLWAVRFWDPI*PGTEATRRSRKALM
Trigger: CATCAGGGCTTTCCTGCTCCTTCTGGTTGCCTCAGTCCCAGGCAAGATAGGGTCCCAGAATCTTACAGCCCAGAGGCCACCTGTTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373887.8
CDS TCA 72 bp GACTGGAGGTCTTCCCCTCTGCATTTGGGGCAGATCTaGTCCTCGCCATTCCTCGGGTTCTCAGAGAGACAG +
Preference number: 6 (lower is better)
Translates to: DWRSSPLHLGQI*SSPFLGFSERQ
Trigger: CTGTCTCTCTGAGAACCCGAGGAATGGCGAGGATCAGATCTGCCCCAAATGCAGAGGGGAAGACCTCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 72 bp CCCGCCCACCCTAAGTGCTGGTCTCCACAATGCACTTaGGGAACATTGTGTCGTCCTTCACGTAGGCGTGCT +
Preference number: 6 (lower is better)
Translates to: PAHPKCWSPQCT*GTLCRPSRRRA
Trigger: AGCACGCCTACGTGAAGGACGACACAATGTTCCTCAAGTGCATTGTGGAGACCAGCACTTAGGGTGGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS TCA 72 bp GAACATTGTGTCGTCCTTCACGTAGGCGTGCTTGGGTaGCTGCAGTTTGCTGAGGGGGAAGAAGAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: EHCVVLHVGVLG*LQFAEGEEEWA
Trigger: TGCCCACTCTTCTTCCCCCTCAGCAAACTGCAGTCACCCAAGCACGCCTACGTGAAGGACGACACAATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373887.8
ENST00000540010.1
ENST00000546084.5
CDS CCA 72 bp GGGGTGAGCCTTCTCCTGAGTTCGAAGACGGCTTCCTaGGCTTATAGACTGGAGGTCTTCCCCTCTGCATTT +
Preference number: 6 (lower is better)
Translates to: GVSLLLSSKTAS*AYRLEVFPSAF
Trigger: AAATGCAGAGGGGAAGACCTCCAGTCTATAAGCCCAGGAAGCCGTCTTCGAACTCAGGAGAAGGCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS TCA 72 bp GCCTTGTGGAGTCCTGGCCTGGGCCTCACTCTCTGGTaGGTAGGAGCTCTGATGACTTTATCTTCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: ALWSPGLGLTLW*VGALMTLSSSL
Trigger: GAGAGAAGAAGATAAAGTCATCAGAGCTCCTACTCACCAGAGAGTGAGGCCCAGGCCAGGACTCCACAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CAA 72 bp GTGACTGAAGGCTTCCTGGTGGAAATCCCCAGGGTGTaGGAGACAGGTCCAAAATTTCAAGTTCTAGGCGCT +
Preference number: 6 (lower is better)
Translates to: VTEGFLVEIPRV*ETGPKFQVLGA
Trigger: AGCGCCTAGAACTTGAAATTTTGGACCTGTCTCCAACACCCTGGGGATTTCCACCAGGAAGCCTTCAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1
CDS CCA 72 bp GCTCTGATGACTTTATCTTCTTCTCTCTGGCTTGTGTaGTTCAACGTCACAGCTGAGTCACAGCAGGGATGG +
Preference number: 6 (lower is better)
Translates to: ALMTLSSSLWLV*FNVTAESQQGW
Trigger: CCATCCCTGCTGTGACTCAGCTGTGACGTTGAACCACACAAGCCAGAGAGAAGAAGATAAAGTCATCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373887.8
ENST00000540010.1