Pregenerated sensors for TRAC (Homo sapiens)
Ensembl gene IDs: ENSG00000277734Ensembl transcript IDs: ENST00000611116.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGGAATGTGCACAGCCAGGGGAGGCTGCAGCAGCCTTGCCTCTaGCGTGAATGTCAGGCAGTGACAAGCAGCAATAAGGGAACAGAG | + |
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Preference number: 1 (lower is better) Translates to: GGNVHSQGRLQQPCL*RECQAVTSSNKGTE Trigger: CTCTGTTCCCTTATTGCTGCTTGTCACTGCCTGACATTCACGGCAGAGGCAAGGCTGCTGCAGCCTCCCCTGGCTGTGCACATTCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCGAGCAGGAGGGAATGTaGACAGCCAGGGGAGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KASAAGHTTRPDTQHSRAEQEGM*TARGGC Trigger: GCAGCCTCCCCTGGCTGTGCACATTCCCTCCTGCTC...GGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCTCGGCCTTGCCTCTGCCGTaGATGTCAGGCAGTGACAAG | + |
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Preference number: 2 (lower is better) Translates to: ASAAGHTTRPDTQHSRASALPLP*MSGSDK Trigger: CTTGTCACTGCCTGACATTCACGGCAGAGGCAAGGC...CGAGGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCTCGCAGCAGCCTTGCCTCTaGCGTGAATGTCAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: ASAAGHTTRPDTQHSRASQQPCL*RECQAV Trigger: CACTGCCTGACATTCACGGCAGAGGCAAGGCTGCTG...CGAGGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGTGGGATGGCGGAGGCAGGGAACAGAGGGGGTaGCAGCAGTGTTTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PRAQENPLKIHHLWDGGGREQRG*QQCLAA Trigger: AGCTGCCAAACACTGCTGCCACCCCCTCTGTTCCCT...GCCTCCGCCATCCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR TCA 90 bp | GCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCTCGCCCAAGAGAACCCACTaGAGATCCATCATCTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: ASAAGHTTRPDTQHSRASPKRTH*RSIICG Trigger: CCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGG...CGAGGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACCATCATCTGTGGGATaGCGGAGGCAGTCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: QIILMKASAAGHTTRPDTPSSVG*RRQSLG Trigger: CCCCAGAGACTGCCTCCGCCATCCCACAGATGATGG...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACAGGTGGCAGCAGTGTTTaGCAGCTCTTCAGCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: QIILMKASAAGHTTRPDTGGSSV*QLFSNL Trigger: AAGATTGCTGAAGAGCTGCCAAACACTGCTGCCACC...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR GCA 72 bp | GGGAATGTGCACAGCCAGGGGAGGCTGCAGCAGCCTTaGCTCTGCCGTGAATGTCAGGCAGTGACAAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GNVHSQGRLQQP*LCRECQAVTSS Trigger: GCTGCTTGTCACTGCCTGACATTCACGGCAGAGGCAAGGCTGCTGCAGCCTCCCCTGGCTGTGCACATTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR CCA 72 bp | AGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGTaGGATGGCGGAGGCAGTCTCTGGGGAGCAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RAQENPLKIHHL*DGGGSLWGAGG Trigger: CCCTCCTGCTCCCCAGAGACTGCCTCCGCCATCCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGTGGGATGGCGGAGGCGGGTGGCAGCAGTGTTaGGCAGCTCTTCAGCAATCT | + |
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Preference number: 3 (lower is better) Translates to: PRAQENPLKIHHLWDGGGGWQQC*AALQQS Trigger: AGATTGCTGAAGAGCTGCCAAACACTGCTGCCACCC...GCCTCCGCCATCCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATGCAGCTTTCACCTCCTaGGGGGTAGGAGAGTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FQIILMKASAAGHTTRPDAAFTS*GVGEFP Trigger: AGGGAACTCTCCTACCCCCAAGGAGGTGAAAGCTGC...ATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTGACAAGCAGCAATAAGGGAACAGAGGGGGTGGCAGCAGTGTTTGGCACAGCCAGGGGAGGCTaGAGCAGCCTTGCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QAVTSSNKGTEGVAAVFGTARGG*SSLASA Trigger: GGCAGAGGCAAGGCTGCTGCAGCCTCCCCTGGCTGT...GCCAAACACTGCTGCCACCCCCTCTGTTCCCTTATTGCTGCTTGTCACTGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | CAGGCAGTGACAAGCAGCAATAAGGGAACAGAGGGGGTGGCAGCAGTGTTTGGCCAGCAGCCTTGCCTCTaGCGTGAATGTCAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QAVTSSNKGTEGVAAVFGQQPCL*RECQAV Trigger: CACTGCCTGACATTCACGGCAGAGGCAAGGCTGCTG...GCCAAACACTGCTGCCACCCCCTCTGTTCCCTTATTGCTGCTTGTCACTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | AACCCCTCACAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCGAGCAGGAGGGAATGTaGACAGCCAGGGGAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: NPSQHSAGPRAQENPLKIEQEGM*TARGGC Trigger: GCAGCCTCCCCTGGCTGTGCACATTCCCTCCTGCTC...GATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTGTGAGGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTGGTAGCAGCTTTCACCTCCTTGGGGGTAGGAGAGTTCCCTCTGTTTCCATCATCTGTGGGATaGCGGAGGCAGTCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TEVVAAFTSLGVGEFPLFPSSVG*RRQSLG Trigger: CCCCAGAGACTGCCTCCGCCATCCCACAGATGATGG...AAACAGAGGGAACTCTCCTACCCCCAAGGAGGTGAAAGCTGCTACCACCTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTGGTAGCAGCTTTCACCTCCTTGGGGGTAGGAGAGTTCCCTCTGTTTAGGGAACAGAGGGGGTaGCAGCAGTGTTTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TEVVAAFTSLGVGEFPLFREQRG*QQCLAA Trigger: AGCTGCCAAACACTGCTGCCACCCCCTCTGTTCCCT...AAACAGAGGGAACTCTCCTACCCCCAAGGAGGTGAAAGCTGCTACCACCTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR TCA 90 bp | AACCCCTCACAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCGCCTTGCCTCTGCCGTaGATGTCAGGCAGTGACAAG | + |
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Preference number: 4 (lower is better) Translates to: NPSQHSAGPRAQENPLKIALPLP*MSGSDK Trigger: CTTGTCACTGCCTGACATTCACGGCAGAGGCAAGGC...GATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTGTGAGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | AACCCCTCACAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCAGGCTGCAGCAGCCTTaGCTCTGCCGTGAATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: NPSQHSAGPRAQENPLKIRLQQP*LCRECQ Trigger: CTGACATTCACGGCAGAGGCAAGGCTGCTGCAGCCT...GATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTGTGAGGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | AAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCATCACAGGAACTTTCTaGGCTGGGGAAGAAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: KASAAGHTTRPDTQHSRAITGTF*AGEEGV Trigger: GACACCTTCTTCCCCAGCCCAGAAAGTTCCTGTGAT...GGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | AAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCGAAGGCGTTTGCACATaGAAAGTCAGATTTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: KASAAGHTTRPDTQHSRAEGVCT*KVRFVA Trigger: AGCAACAAATCTGACTTTGCATGTGCAAACGCCTTC...GGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | AACCCCTCACAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCGGTGGCAGCAGTGTTTaGCAGCTCTTCAGCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: NPSQHSAGPRAQENPLKIGGSSV*QLFSNL Trigger: AAGATTGCTGAAGAGCTGCCAAACACTGCTGCCACC...GATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTGTGAGGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | AAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCGTTGTTGAAGGCGTTTaGACATGCAAAGTCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: KASAAGHTTRPDTQHSRAVVEGV*TCKVRF Trigger: AAATCTGACTTTGCATGTGCAAACGCCTTCAACAAC...GGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACTTGCAGATCTCAGCTaGACCACAGCCGCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: QIILMKASAAGHTTRPDTLADLS*TTAAAS Trigger: TGACGCTGCGGCTGTGGTCCAGCTGAGATCTGCAAG...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCTCTTCAGCAATCTTAATCATAAATTCGGGTAGGATCCAGTTGGTGGCACCCAAGAGAACCCACTaGAGATCCATCATCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GSSSAILIINSGRIQLVAPKRTH*RSIICG Trigger: CCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGG...TGCCACCAACTGGATCCTACCCGAATTTATGATTAAGATTGCTGAAGAGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | CAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGCAAAGTCAGATTTGTTaGTCCAGGCCACAGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QHSAGPRAQENPLKIHHLQSQIC*SRPQHC Trigger: ACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTG...CAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACATTAGAGTCTCTCAGCTaGTACACGGCAGGGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QIILMKASAAGHTTRPDTLESLS*YTAGSG Trigger: CCCTGACCCTGCCGTGTACCAGCTGAGAGACTCTAA...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCTCTTCAGCAATCTTAATCATAAATTCGGGTAGGATCCAGTTGGTGGCAAGGAACTTTCTGGGCTaGGGAAGAAGGTGTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GSSSAILIINSGRIQLVARNFLG*GRRCLL Trigger: CAGAAGACACCTTCTTCCCCAGCCCAGAAAGTTCCT...TGCCACCAACTGGATCCTACCCGAATTTATGATTAAGATTGCTGAAGAGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CCA 90 bp | TTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATAAGATCCATCATCTGTaGGATGGCGGAGGCAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FQIILMKASAAGHTTRPDKIHHL*DGGGSL Trigger: GAGACTGCCTCCGCCATCCCACAGATGATGGATCTT...ATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR GCA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACAGCTGTCTTACAATCTTaGAGATCTCAGCTGGACCAC | + |
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Preference number: 4 (lower is better) Translates to: QIILMKASAAGHTTRPDTAVLQS*RSQLDH Trigger: GTGGTCCAGCTGAGATCTGCAAGATTGTAAGACAGC...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR TCA 90 bp | TTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATGAGAATCAAAATCGGTaGATAGGCAGACAGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: FQIILMKASAAGHTTRPDENQNR*IGRQTC Trigger: ACAAGTCTGTCTGCCTATTCACCGATTTTGATTCTC...ATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | AAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCCAGGCCACAGCACTGTaGCTCTTGAAGTCCATAGAC | + |
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Preference number: 5 (lower is better) Translates to: KASAAGHTTRPDTQHSRAQATAL*LLKSID Trigger: GTCTATGGACTTCAAGAGCAACAGTGCTGTGGCCTG...GGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGTGGGATGGCGGAGGCGCAAAGTCAGATTTGTaGCTCCAGGCCACAGCACTG | + |
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Preference number: 5 (lower is better) Translates to: PRAQENPLKIHHLWDGGGAKSDL*LQATAL Trigger: CAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGC...GCCTCCGCCATCCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | GCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCATAGCAGGGCCTCGGGCTGTCTTACAATCTaGCAGATCTCAGCTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: ASAAGHTTRPDTQHSRASGCLTI*QISAGP Trigger: TGGTCCAGCTGAGATCTGCAAGATTGTAAGACAGCC...CGAGGCCCTGCTATGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGTGGGATGGCGGAGGCACAGCACTGTTGCTCTaGAAGTCCATAGACCTCATG | + |
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Preference number: 5 (lower is better) Translates to: PRAQENPLKIHHLWDGGGTALLL*KSIDLM Trigger: CATGAGGTCTATGGACTTCAAGAGCAACAGTGCTGT...GCCTCCGCCATCCCACAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCAGCAGCTTTCACCTCCTaGGGGGTAGGAGAGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HFNEGIGSRTYNTPRYTAAAFTS*GVGEFP Trigger: AGGGAACTCTCCTACCCCCAAGGAGGTGAAAGCTGC...TGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACAGCAGGGTGGCAGCAGTGTTaGGCAGCTCTTCAGCAATCT | + |
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Preference number: 5 (lower is better) Translates to: HFNEGIGSRTYNTPRYTAGWQQC*AALQQS Trigger: AGATTGCTGAAGAGCTGCCAAACACTGCTGCCACCC...TGCTGTGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CAACATTCTGCAGGACCTAGAGCCCAAGAGAACCCACTGAAGATCCATCATCTGCATGCAAAGTCAGATTaGTTGCTCCAGGCCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: QHSAGPRAQENPLKIHHLHAKSD*LLQATA Trigger: TGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATG...CAGATGATGGATCTTCAGTGGGTTCTCTTGGGCTCTAGGTCCTGCAGAATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTGGTAGCAGCTTTCACCTCCTTGGGGGTAGGAGAGTTCCCTCTGTTTTCTGGAATAATGCTGTaGTTGAAGGCGTTTGCACAT | + |
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Preference number: 5 (lower is better) Translates to: TEVVAAFTSLGVGEFPLFSGIML*LKAFAH Trigger: ATGTGCAAACGCCTTCAACAACAGCATTATTCCAGA...AAACAGAGGGAACTCTCCTACCCCCAAGGAGGTGAAAGCTGCTACCACCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS GCA 90 bp | GGGGAAGAAGGTGTCTTCTGGAATAATGCTGTTGTTGAAGGCGTTTaGACATGCAAAGTCAGATTTGTTGCTCCAGGCCACAGCACTGTT | + |
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Preference number: 5 (lower is better) Translates to: GEEGVFWNNAVVEGV*TCKVRFVAPGHSTV Trigger: AACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCCAGAAGACACCTTCTTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS GCA 90 bp | GAAGGTGTCTTCTGGAATAATGCTGTTGTTGAAGGCGTTTGCACATaGAAAGTCAGATTTGTTGCTCCAGGCCACAGCACTGTTGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: EGVFWNNAVVEGVCT*KVRFVAPGHSTVAL Trigger: AAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCCAGAAGACACCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCTTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCAATAGGCAGACAGACTaGTCACTGGATTTAGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LLFQIILMKASAAGHTTRNRQTD*SLDLES Trigger: AGACTCTAAATCCAGTGACAAGTCTGTCTGCCTATT...GCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAAGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | TTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATGGAATAATGCTGTTGTaGAAGGCGTTTGCACATGCA | + |
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Preference number: 5 (lower is better) Translates to: FQIILMKASAAGHTTRPDGIMLL*KAFAHA Trigger: TGCATGTGCAAACGCCTTCAACAACAGCATTATTCC...ATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCCCAGATACACTTTTCTCGACCAGCTaGACATCACAGGAACTTTCT | + |
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Preference number: 5 (lower is better) Translates to: QIILMKASAAGHTTRPDTLFSTS*TSQELS Trigger: AGAAAGTTCCTGTGATGTCAAGCTGGTCGAGAAAAG...TGTATCTGGGCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCTTCCAAATCATTTTAATGAAGGCATCGGCAGCAGGACATACAACACGCATGTCTAGCACAGTTTaGTCTGTGATATACACATCA | + |
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Preference number: 5 (lower is better) Translates to: LLFQIILMKASAAGHTTRMSSTV*SVIYTS Trigger: TGATGTGTATATCACAGACAAAACTGTGCTAGACAT...GCGTGTTGTATGTCCTGCTGCCGATGCCTTCATTAAAATGATTTGGAAGAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | GCAAAGTCAGATTTGTTGCTCCAGGCCACAGCACTGTaGCTCTTGAAGTCCATAGACCTCATGTCTAGCACA | + |
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Preference number: 6 (lower is better) Translates to: AKSDLLLQATAL*LLKSIDLMSST Trigger: TGTGCTAGACATGAGGTCTATGGACTTCAAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | CTGTTGTTGAAGGCGTTTGCACATGCAAAGTCAGATTaGTTGCTCCAGGCCACAGCACTGTTGCTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLLKAFAHAKSD*LLQATALLLLK Trigger: CTTCAAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 90 bp | GGAATAATGCTGTTGTTGAAGGCGTTTGCACATGCAAAGTCAGATTaGTTGCTCCAGGCCACAGCACTGTTGCTCTTGAAGTCCATAGAC | + |
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Preference number: 6 (lower is better) Translates to: GIMLLLKAFAHAKSD*LLQATALLLLKSID Trigger: GTCTATGGACTTCAAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 90 bp | GAACTTTCTGGGCTGGGGAAGAAGGTGTCTTCTGGAATAATGCTGTaGTTGAAGGCGTTTGCACATGCAAAGTCAGATTTGTTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ELSGLGKKVSSGIML*LKAFAHAKSDLLLQ Trigger: CTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCCAGAAGACACCTTCTTCCCCAGCCCAGAAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | TCAGATTTGTTGCTCCAGGCCACAGCACTGTTGCTCTaGAAGTCCATAGACCTCATGTCTAGCACAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SDLLLQATALLL*KSIDLMSSTVL Trigger: CAAAACTGTGCTAGACATGAGGTCTATGGACTTCAAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | AGGTTCGTATCTGTTTCAAAGCTTTTCTCGACCAGCTaGACATCACAGGAACTTTCTGGGCTGGGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RFVSVSKLFSTS*TSQELSGLGKK Trigger: CTTCTTCCCCAGCCCAGAAAGTTCCTGTGATGTCAAGCTGGTCGAGAAAAGCTTTGAAACAGATACGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 90 bp | CATGCAAAGTCAGATTTGTTGCTCCAGGCCACAGCACTGTTGCTCTaGAAGTCCATAGACCTCATGTCTAGCACAGTTTTGTCTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: HAKSDLLLQATALLL*KSIDLMSSTVLSVI Trigger: TATCACAGACAAAACTGTGCTAGACATGAGGTCTATGGACTTCAAGAGCAACAGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS GCA 72 bp | TTCTGGAATAATGCTGTTGTTGAAGGCGTTTGCACATaGAAAGTCAGATTTGTTGCTCCAGGCCACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FWNNAVVEGVCT*KVRFVAPGHST Trigger: AGTGCTGTGGCCTGGAGCAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | CTGGGGAAGAAGGTGTCTTCTGGAATAATGCTGTTGTaGAAGGCGTTTGCACATGCAAAGTCAGATTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGKKVSSGIMLL*KAFAHAKSDLL Trigger: CAACAAATCTGACTTTGCATGTGCAAACGCCTTCAACAACAGCATTATTCCAGAAGACACCTTCTTCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS TCA 72 bp | AGGAGGAGGATTCGGAACCCAATCACTGACAGGTTTTaGAAGTTTAGGTTCGTATCTGTTTCAAAGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: RRRIRNPITDRF*KFRFVSVSKLF Trigger: GAAAAGCTTTGAAACAGATACGAACCTAAACTTTCAAAACCTGTCAGTGATTGGGTTCCGAATCCTCCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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| CDS CAA 72 bp | CTCTTGAAGTCCATAGACCTCATGTCTAGCACAGTTTaGTCTGTGATATACACATCAGAATCCTTACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: LLKSIDLMSSTV*SVIYTSESLLC Trigger: ACAAAGTAAGGATTCTGATGTGTATATCACAGACAAAACTGTGCTAGACATGAGGTCTATGGACTTCAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611116.2 |
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