RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRABD2B (Homo sapiens)

Ensembl gene IDs: ENSG00000269113

Ensembl transcript IDs: ENST00000435576.2, ENST00000606738.3

Found 530 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGCCAATCCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTaGAGGTGGTGGCAGGAGCAGTTGGGTGTGGCCGAAGACCCCTGT +
Preference number: 1 (lower is better)
Translates to: LANPMWTALDVLGTP*RWWQEQLGVAEDPC
Trigger: ACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGGATTGGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGCAGTTaGGTGTGGCCGAAGACCCCTGTGTCATTTCTCTGGCTTCTCCAC +
Preference number: 1 (lower is better)
Translates to: PSTCWAPPGGGGRSS*VWPKTPVSFLWLLH
Trigger: GTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTaGCAGGAGCAGTTGGGTGTGGCCGAAGACCCCTGTGTCATTTCT +
Preference number: 1 (lower is better)
Translates to: PMWTALDVLGTPWRW*QEQLGVAEDPCVIS
Trigger: AGAAATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp ACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGCAGTTGGGTGTaGCCGAAGACCCCTGTGTCATTTCTCTGGCTTCTCCACTTGGGG +
Preference number: 1 (lower is better)
Translates to: TCWAPPGGGGRSSWV*PKTPVSFLWLLHLG
Trigger: CCCCAAGTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp AATCCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTaGTGGCAGGAGCAGTTGGGTGTGGCCGAAGACCCCTGTGTCATT +
Preference number: 1 (lower is better)
Translates to: NPMWTALDVLGTPWR*WQEQLGVAEDPCVI
Trigger: AATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CTAGAGCCTCCTTTGGCTGAATCAGCCCCTGCCCACCCCAGCCACTaGGGACCCAAGATGTCTGAGAGCCCTTTGTCCCTGGCAGCTCAC +
Preference number: 1 (lower is better)
Translates to: LEPPLAESAPAHPSH*GPKMSESPLSLAAH
Trigger: GTGAGCTGCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGTGGCTGGGGTGGGCAGGGGCTGATTCAGCCAAAGGAGGCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp ACACCTCTGGCTCCCAAATCCAGCTTCACAAAGGCTAAGCCTGCCTaGCTGCCCCTCCTGCTGAGGGCCCCACAGTCGGAGAAGCCAAAC +
Preference number: 1 (lower is better)
Translates to: TPLAPKSSFTKAKPA*LPLLLRAPQSEKPN
Trigger: GTTTGGCTTCTCCGACTGTGGGGCCCTCAGCAGGAGGGGCAGGCAGGCAGGCTTAGCCTTTGTGAAGCTGGATTTGGGAGCCAGAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CCTCCACTGTGGATGACAGGGCTCTCCCTGTCTTCATCTGGCTGCTaGTGCATCAGACCCACCACTGGAGGAAGACCTGGGGACATGGCC +
Preference number: 1 (lower is better)
Translates to: PPLWMTGLSLSSSGC*CIRPTTGGRPGDMA
Trigger: GGCCATGTCCCCAGGTCTTCCTCCAGTGGTGGGTCTGATGCACCAGCAGCCAGATGAAGACAGGGAGAGCCCTGTCATCCACAGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp CTCCCTCCACTGTGGATGACAGGGCTCTCCCTGTCTTCATCTGGCTaGTGGTGCATCAGACCCACCACTGGAGGAAGACCTGGGGACATG +
Preference number: 1 (lower is better)
Translates to: LPPLWMTGLSLSSSG*WCIRPTTGGRPGDM
Trigger: CATGTCCCCAGGTCTTCCTCCAGTGGTGGGTCTGATGCACCAGCAGCCAGATGAAGACAGGGAGAGCCCTGTCATCCACAGTGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CATCACGCTGGCCAGGCACAGGGTAAGAGACATGAGAGACGTGGCTaGTCAGCAGGGTTGGGTCACGAAGGGTCTAGCGGACACTTCAGG +
Preference number: 1 (lower is better)
Translates to: HHAGQAQGKRHERRG*SAGLGHEGSSGHFR
Trigger: CCTGAAGTGTCCGCTAGACCCTTCGTGACCCAACCCTGCTGACCAGCCACGTCTCTCATGTCTCTTACCCTGTGCCTGGCCAGCGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GCTGCTGGTGCATCAGACCCACCACTGGAGGAAGACCTGGGGACATaGCCATTCCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAG +
Preference number: 1 (lower is better)
Translates to: AAGASDPPLEEDLGT*PFQHAPESPSSHSQ
Trigger: CTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGGAATGGCCATGTCCCCAGGTCTTCCTCCAGTGGTGGGTCTGATGCACCAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp TTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTaGGACAAGGGGCCTGAGCACCTAGGCTTGTCCAGGTCTAGCCGA +
Preference number: 1 (lower is better)
Translates to: LGSTVTMALGWRLGK*DKGPEHLGLSRSSR
Trigger: TCGGCTAGACCTGGACAAGCCTAGGTGCTCAGGCCCCTTGTCCCACTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp CCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTaGCAGAGCCCTTTGGCCAGAGGGGTCAACATAAGCAGCCGGCCA +
Preference number: 1 (lower is better)
Translates to: PRSGKSGHATHGTCS*QSPLARGVNISSRP
Trigger: TGGCCGGCTGCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp GGGGCCTTGGAGGCATGCTACTCTGTCACCTTTCCCACCTCCACATaGTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: GALEACYSVTFPTST*FQSHGSLWVLGRKP
Trigger: TGGCTTTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAAAGGTGACAGAGTAGCATGCCTCCAAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp TTCATCTGGCTGCTGGTGCATCAGACCCACCACTGGAGGAAGACCTaGGGACATGGCCATTCCAACATGCCCCAGAGAGCCCTTCATCAC +
Preference number: 1 (lower is better)
Translates to: FIWLLVHQTHHWRKT*GHGHSNMPQRALHH
Trigger: GTGATGAAGGGCTCTCTGGGGCATGTTGGAATGGCCATGTCCCCAGGTCTTCCTCCAGTGGTGGGTCTGATGCACCAGCAGCCAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GACTTTCCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTaGAGATTAGGCAAGTGGGACAAGGGGCCTGAGCACCTAGGCTTG +
Preference number: 1 (lower is better)
Translates to: DFPSSLGSTVTMALG*RLGKWDKGPEHLGL
Trigger: CAAGCCTAGGTGCTCAGGCCCCTTGTCCCACTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGGAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GTCACCTTTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTaGGTCCTGGGAAGAAAGCCAAGCACCTCATCTCCATGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: VTFPTSTCFQSHGSL*VLGRKPSTSSPWRP
Trigger: GGGCCTCCATGGAGATGAGGTGCTTGGCTTTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAAAGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp AGCTGTAAAGAATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTaGCCATCCCATGAGCTGCCCAGAACTTGCCGTCTCAGAAGGGAG +
Preference number: 1 (lower is better)
Translates to: SCKEFSCLPRCPWDS*PSHELPRTCRLRRE
Trigger: CTCCCTTCTGAGACGGCAAGTTCTGGGCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATTCTTTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp CTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGATCTaGTCCCTTGCAGAGAGAACGTGGCAGAACAGGGAACAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: LGGVKACAGPSLGEI*SLAERTWQNREQEA
Trigger: TGCCTCCTGTTCCCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp TGGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATaGAGTTGCCAGAGCCCTTTGGCCAGAGGGGTCAACATAAGCAGC +
Preference number: 1 (lower is better)
Translates to: WAPRSGKSGHATHGT*SCQSPLARGVNISS
Trigger: GCTGCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp AAGCTGGGCAAGATGGCACTGGGGCCAATTAGCTGCCATCAAGCCTaGCAGGGAAACCCACGAAGCTATAAAGTTGGGGTGCACTGGGCT +
Preference number: 1 (lower is better)
Translates to: KLGKMALGPISCHQA*QGNPRSYKVGVHWA
Trigger: AGCCCAGTGCACCCCAACTTTATAGCTTCGTGGGTTTCCCTGGCAGGCTTGATGGCAGCTAATTGGCCCCAGTGCCATCTTGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp GCAAGATGTCAACTCTCCTACCACTTCTTCAGCCAGTGGGCACACTaGCCCTGCTCAAACACCTCTCCCGATGGGAAACCTGCCACCCTT +
Preference number: 1 (lower is better)
Translates to: ARCQLSYHFFSQWAH*PCSNTSPDGKPATL
Trigger: AAGGGTGGCAGGTTTCCCATCGGGAGAGGTGTTTGAGCAGGGGCAGTGTGCCCACTGGCTGAAGAAGTGGTAGGAGAGTTGACATCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp AAGCACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTaGCCTCCAGCCCTAGAACTGCCCAGGCAGGAATCAAGGTCTTCA +
Preference number: 1 (lower is better)
Translates to: KHLISMEAQDCPCHP*PPALELPRQESRSS
Trigger: TGAAGACCTTGATTCCTGCCTGGGCAGTTCTAGGGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CTTCTCGTGGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATaGCACATGCAGTTGCCAGAGCCCTTTGGCCAGAGGGGTCAACAT +
Preference number: 1 (lower is better)
Translates to: LLVGSKIWQVRTCDT*HMQLPEPFGQRGQH
Trigger: ATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCCACGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp ACCCCAGCCACTGGGGACCCAAGATGTCTGAGAGCCCTTTGTCCCTaGCAGCTCACCGGAAACATCTTAGACTTGGATCCCGTTCAAAGC +
Preference number: 1 (lower is better)
Translates to: TPATGDPRCLRALCP*QLTGNILDLDPVQS
Trigger: GCTTTGAACGGGATCCAAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGTGGCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp GTGAAGGGTCCTTTCTGCTGTCAGGTTCCAGGACTCTGTAATTACTaGGGCACCTGCCCCATAGGGTTTCAGGCCTCCCAGGTGGGAGTT +
Preference number: 1 (lower is better)
Translates to: VKGPFCCQVPGLCNY*GTCPIGFQASQVGV
Trigger: AACTCCCACCTGGGAGGCCTGAAACCCTATGGGGCAGGTGCCTCAGTAATTACAGAGTCCTGGAACCTGACAGCAGAAAGGACCCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp TCCAGTCTCCTGCCAGGTCTCAAGCTCAAACACGTCCATCAGGGCTaGGCTGTAAAGAATTCAGCTGCCTGCCAAGATGCCCGTGGGACT +
Preference number: 1 (lower is better)
Translates to: SSLLPGLKLKHVHQG*AVKNSAACQDARGT
Trigger: AGTCCCACGGGCATCTTGGCAGGCAGCTGAATTCTTTACAGCTCAGCCCTGATGGACGTGTTTGAGCTTGAGACCTGGCAGGAGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp GAGATAGCTGCCAAGCTGGGCAAGATGGCACTGGGGCCAATTAGCTaGCATCAAGCCTGCCAGGGAAACCCACGAAGCTATAAAGTTGGG +
Preference number: 1 (lower is better)
Translates to: EIAAKLGKMALGPIS*HQACQGNPRSYKVG
Trigger: CCCAACTTTATAGCTTCGTGGGTTTCCCTGGCAGGCTTGATGGCAGCTAATTGGCCCCAGTGCCATCTTGCCCAGCTTGGCAGCTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp AGAACAGGGAACAGGAGGCAGGAATTGTTTTGCATCACACTGATCTaGGGCCACATCCTGGCTGGGGGATCTTCAGCAAGTCCCTTCGCC +
Preference number: 1 (lower is better)
Translates to: RTGNRRQELFCITLI*GHILAGGSSASPFA
Trigger: GGCGAAGGGACTTGCTGAAGATCCCCCAGCCAGGATGTGGCCCCAGATCAGTGTGATGCAAAACAATTCCTGCCTCCTGTTCCCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp CAAGGTTCCATGCTTCCTAGATCCCAGATCTTTGACTCTCAGGACTaGAGGCATCCTCAGCAGCCCTTTGCAGCTCCCTGGCAGCCTGAT +
Preference number: 1 (lower is better)
Translates to: QGSMLPRSQIFDSQD*RHPQQPFAAPWQPD
Trigger: ATCAGGCTGCCAGGGAGCTGCAAAGGGCTGCTGAGGATGCCTCCAGTCCTGAGAGTCAAAGATCTGGGATCTAGGAAGCATGGAACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp TTGCAGAGCCAGGAGGGACCCTCAATGTCATCTACACCAGGCCCTTaGCAAGATGTCAACTCTCCTACCACTTCTTCAGCCAGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: LQSQEGPSMSSTPGP*QDVNSPTTSSASGH
Trigger: GTGCCCACTGGCTGAAGAAGTGGTAGGAGAGTTGACATCTTGCCAAGGGCCTGGTGTAGATGACATTGAGGGTCCCTCCTGGCTCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GCCCAGCTCCCACTTGGAGAAAGGGTGAGGATAGCCGATGCTCCCTaGAAAGAGCCAAGTAGGGGGTCAATCAGTTCTCGTGAACCCTTT +
Preference number: 1 (lower is better)
Translates to: AQLPLGERVRIADAP*KEPSRGSISSREPF
Trigger: AAAGGGTTCACGAGAACTGATTGACCCCCTACTTGGCTCTTTCCAGGGAGCATCGGCTATCCTCACCCTTTCTCCAAGTGGGAGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTaGGAAGAAAGCCAAGCACCTCATCTCCATGGAGGCCCAAGATTG +
Preference number: 1 (lower is better)
Translates to: FPPPHAFNPMAACGS*EESQAPHLHGGPRL
Trigger: CAATCTTGGGCCTCCATGGAGATGAGGTGCTTGGCTTTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp AAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTaGGATCTGCTCCCTTGCAGAGAGAACGTGGCAGAACAGGGAACA +
Preference number: 1 (lower is better)
Translates to: KVSWWSESLCWPQFG*DLLPCRENVAEQGT
Trigger: TGTTCCCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp GCCCTAGAACTGCCCAGGCAGGAATCAAGGTCTTCATTTGACAGATaGGGAAGTGAAGGCTCAGAGAGGGACAGGAACTTGCCCAAGGTC +
Preference number: 1 (lower is better)
Translates to: ALELPRQESRSSFDR*GSEGSERDRNLPKV
Trigger: GACCTTGGGCAAGTTCCTGTCCCTCTCTGAGCCTTCACTTCCTCATCTGTCAAATGAAGACCTTGATTCCTGCCTGGGCAGTTCTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp ACACCAGAACAGAGAGGTCTGGATTTATGTCCTCACTCTCCCACTTaGCGTGTGACCTTGGGCTACCCACCTGGTTCTCTCTGGATCTCA +
Preference number: 1 (lower is better)
Translates to: TPEQRGLDLCPHSPT*RVTLGYPPGSLWIS
Trigger: TGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGACCTCTCTGTTCTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp TCAGCTTTCGTGAGAGGTAGAGGACCCAGGGCCACAATAACATGCTaGCCGACCTTAAGCAGATCACTTTACCTGCTGGGTCTCAGACCT +
Preference number: 1 (lower is better)
Translates to: SAFVRGRGPRATITC*PTLSRSLYLLGLRP
Trigger: AGGTCTGAGACCCAGCAGGTAAAGTGATCTGCTTAAGGTCGGGCAGCATGTTATTGTGGCCCTGGGTCCTCTACCTCTCACGAAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp CAGTCAGCTTTCGTGAGAGGTAGAGGACCCAGGGCCACAATAACATaGTGCCCGACCTTAAGCAGATCACTTTACCTGCTGGGTCTCAGA +
Preference number: 1 (lower is better)
Translates to: QSAFVRGRGPRATIT*CPTLSRSLYLLGLR
Trigger: TCTGAGACCCAGCAGGTAAAGTGATCTGCTTAAGGTCGGGCAGCATGTTATTGTGGCCCTGGGTCCTCTACCTCTCACGAAAGCTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp TCTCCCACTTGCCGTGTGACCTTGGGCTACCCACCTGGTTCTCTCTaGATCTCAGTTTATTCATTTGTTCTGTGGGGTGGGGACTGCTTT +
Preference number: 1 (lower is better)
Translates to: SPTCRVTLGYPPGSL*ISVYSFVLWGGDCF
Trigger: AAAGCAGTCCCCACCCCACAGAACAAATGAATAAACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp AGGTGTGGGTTGCTGCTTATGGAATGGTGGTTCTCTGGCCCAGGATaGGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTG +
Preference number: 1 (lower is better)
Translates to: RCGLLLMEWWFSGPG*ENSSAPDMQIPAYV
Trigger: CACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTGGGCCAGAGAACCACCATTCCATAAGCAGCAACCCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GTAAGGGAGAGTTTAGGATCCCCTAATATGCCCAGAGGAGGGATCTaGGAAAGACTAAGGCTGAATCTTCCTGAAGTTAGGGGCCAGGAC +
Preference number: 1 (lower is better)
Translates to: VRESLGSPNMPRGGI*ERLRLNLPEVRGQD
Trigger: GTCCTGGCCCCTAACTTCAGGAAGATTCAGCCTTAGTCTTTCCCAGATCCCTCCTCTGGGCATATTAGGGGATCCTAAACTCTCCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp AACAGAGAGGTCTGGATTTATGTCCTCACTCTCCCACTTGCCGTGTaGCCTTGGGCTACCCACCTGGTTCTCTCTGGATCTCAGTTTATT +
Preference number: 1 (lower is better)
Translates to: NREVWIYVLTLPLAV*PWATHLVLSGSQFI
Trigger: AATAAACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGACCTCTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp TCCTGCATATGTGCCTCAAGTCTTTTGGGTCATAAGTCAGCAAGTTaGGTTCATTTCAGACCCTGGCCAGCTGGTGGTCCTCAGAGATCA +
Preference number: 1 (lower is better)
Translates to: SCICASSLLGHKSAS*VHFRPWPAGGPQRS
Trigger: TGATCTCTGAGGACCACCAGCTGGCCAGGGTCTGAAATGAACTCAACTTGCTGACTTATGACCCAAAAGACTTGAGGCACATATGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp GCTTATGGAATGGTGGTTCTCTGGCCCAGGATGAGAGAATTCAAGTaGCCCAGACATGCAGATTCCTGCATATGTGCCTCAAGTCTTTTG +
Preference number: 1 (lower is better)
Translates to: AYGMVVLWPRMREFK*PRHADSCICASSLL
Trigger: CAAAAGACTTGAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTGGGCCAGAGAACCACCATTCCATAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp ACCAGCCCCAATTCTGCTGTCTGCCACACAGGATGCCATCAAAGCTaGAATTCCCTGGAGAACTTCTCTTGTCCTTCACAGCATTTTCAA +
Preference number: 1 (lower is better)
Translates to: TSPNSAVCHTGCHQS*NSLENFSCPSQHFQ
Trigger: TTGAAAATGCTGTGAAGGACAAGAGAAGTTCTCCAGGGAATTGCAGCTTTGATGGCATCCTGTGTGGCAGACAGCAGAATTGGGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp AGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCAAGTCTTTTaGGTCATAAGTCAGCAAGTTGAGTTCATTTCAGACCCTGGCCAG +
Preference number: 1 (lower is better)
Translates to: SAPDMQIPAYVPQVF*VISQQVEFISDPGQ
Trigger: CTGGCCAGGGTCTGAAATGAACTCAACTTGCTGACTTATGACCCAAAAGACTTGAGGCACATATGCAGGAATCTGCATGTCTGGGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp GTTCTTATCTCACAGTCACTGAAAAACTATCACCAGCCCCAATTCTaGTGTCTGCCACACAGGATGCCATCAAAGCTGCAATTCCCTGGA +
Preference number: 1 (lower is better)
Translates to: VLISQSLKNYHQPQF*CLPHRMPSKLQFPG
Trigger: TCCAGGGAATTGCAGCTTTGATGGCATCCTGTGTGGCAGACAGCAGAATTGGGGCTGGTGATAGTTTTTCAGTGACTGTGAGATAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp CACAGAACTAGCGCAAGAATCAGTGAAGCAAGTGTGCAAAGTGCTTaGCACGCTGCAGGCTTTGGAAAAATGGCAGCTCTCATTACTATT +
Preference number: 1 (lower is better)
Translates to: HRTSARISEASVQSA*HAAGFGKMAALITI
Trigger: AATAGTAATGAGAGCTGCCATTTTTCCAAAGCCTGCAGCGTGGCAAGCACTTTGCACACTTGCTTCACTGATTCTTGCGCTAGTTCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp GAAATAGGAAGTCACATTTTTGCCAAGGATAAACCAACTCCAGCCTaGATTGAGGTCAAGTTCAGTTTAGAGCATGGTGCCCACAGGGCT +
Preference number: 1 (lower is better)
Translates to: EIGSHIFAKDKPTPA*IEVKFSLEHGAHRA
Trigger: AGCCCTGTGGGCACCATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGCAAAAATGTGACTTCCTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp AAGCAGATCACTTTACCTGCTGGGTCTCAGACCTTTCATCTTTCCTaGCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTGCACACAA +
Preference number: 1 (lower is better)
Translates to: KQITLPAGSQTFHLS*LPHSQTEKSKKCTQ
Trigger: TTGTGTGCACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCTGAGACCCAGCAGGTAAAGTGATCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp TTTCAATGCAAGGACAAATTTGTTCATAACCAGCACAAGGTTCCATaGTTCCTAGATCCCAGATCTTTGACTCTCAGGACTGGAGGCATC +
Preference number: 1 (lower is better)
Translates to: FQCKDKFVHNQHKVP*FLDPRSLTLRTGGI
Trigger: GATGCCTCCAGTCCTGAGAGTCAAAGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTGGTTATGAACAAATTTGTCCTTGCATTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 90 bp AGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTaGAAGAAATGTCAGTTAGTGGTGGATAGATCGTGTCAAAGGTGT +
Preference number: 1 (lower is better)
Translates to: RATGAFYEAGHKERF*KKCQLVVDRSCQRC
Trigger: ACACCTTTGACACGATCTATCCACCACTAACTGACATTTCTTCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp CTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGTaGAGGGTCCTTTCTGCTGTCAGGTTCCAGGACTCTGTAATTACT +
Preference number: 1 (lower is better)
Translates to: LWALLFLLLLLLSIK*RVLSAVRFQDSVIT
Trigger: AGTAATTACAGAGTCCTGGAACCTGACAGCAGAAAGGACCCTTCACTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 90 bp AGATCACTTTACCTGCTGGGTCTCAGACCTTTCATCTTTCCTGCCTaGCTCACAGTCAAACAGAAAAGTCTAAGAAGTGCACACAAATTT +
Preference number: 1 (lower is better)
Translates to: RSLYLLGLRPFIFPA*LTVKQKSLRSAHKF
Trigger: AAATTTGTGTGCACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCTGAGACCCAGCAGGTAAAGTGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 90 bp TCTAAGAAGTGCACACAAATTTCTCAGAGCAACAGGAGCATTTTATaGGGCTGGGCACAAAGAACGTTTCTGGAAGAAATGTCAGTTAGT +
Preference number: 1 (lower is better)
Translates to: SKKCTQISQSNRSIL*GWAQRTFLEEMSVS
Trigger: ACTAACTGACATTTCTTCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAAATTTGTGTGCACTTCTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGGTGGCAGGAGCAGTTaGGTGTGGCCGAAGACCCCT +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAGGRSS*VWPKTP
Trigger: AGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCTTCCCAGGCCGCGGGTaGATCCAGCAGAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAFPGRG*IQQRGG
Trigger: TCCTCCCCTCTGCTGGATGCACCCGCGGCCTGGGAA...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp CAGGCACAGGGTAAGAGACATGAGAGACGTGGCTGGTCAGCAGGGTaGGGTCACGAAGGGTCTAGCGGACACTTCAGGGTGAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: QAQGKRHERRGWSAG*GHEGSSGHFRVRLR
Trigger: CCTCAGCCTCACCCTGAAGTGTCCGCTAGACCCTTCGTGACCCAACCCTGCTGACCAGCCACGTCTCTCATGTCTCTTACCCTGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp CCTGCCCACCCCAGCCACTGGGGACCCAAGATGTCTGAGAGCCCTTaGTCCCTGGCAGCTCACCGGAAACATCTTAGACTTGGATCCCGT +
Preference number: 2 (lower is better)
Translates to: PAHPSHWGPKMSESP*SLAAHRKHLRLGSR
Trigger: ACGGGATCCAAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGTGGCTGGGGTGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCCCAGGAGGCTTCGGTaGTCCAAGAGCAAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIPRRLR*SKSKPV
Trigger: GACTGGCTTGCTCTTGGATCACCGAAGCCTCCTGGG...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGGAGTCCCTGTCACCTaGCTCCCCACTTGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKGVPVT*LPTWLL
Trigger: CAGCAGCCAAGTGGGGAGGCAGGTGACAGGGACTCC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCATGAGAGACGTGGCTaGTCAGCAGGGTTGGGTCAC +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAHERRG*SAGLGH
Trigger: GTGACCCAACCCTGCTGACCAGCCACGTCTCTCATG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp TCCTGGGAAGAAAGCCAAGCACCTCATCTCCATGGAGGCCCAAGATaGTCCATGTCACCCCTGCCCTCCAGCCCTAGAACTGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SWEESQAPHLHGGPR*SMSPLPSSPRTAQA
Trigger: TGCCTGGGCAGTTCTAGGGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTGCTTGGCTTTCTTCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAAGGCTAAGCCTGCCTaGCTGCCCCTCCTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEKAKPA*LPLLLR
Trigger: CCTCAGCAGGAGGGGCAGGCAGGCAGGCTTAGCCTT...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCAGGAGCAGTTGGGTGTaGCCGAAGACCCCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: NSAACQDARGTPDHPMSCRSSWV*PKTPVS
Trigger: TGACACAGGGGTCTTCGGCCACACCCAACTGCTCCT...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp TCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTaGCCAGAGCCCTTTGGCCAGAGGGGTCAACATAAGCAGCCGGCC +
Preference number: 2 (lower is better)
Translates to: SKIWQVRTCDTWHMQ*PEPFGQRGQHKQPA
Trigger: GGCCGGCTGCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACTCCCACTTGCCGTGTaGCCTTGGGCTACCCACCTG +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRLPLAV*PWATHL
Trigger: CAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTTGCCCGTGGGACTCCTaGCCATCCCATGAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSCPWDS*PSHELP
Trigger: GGGCAGCTCATGGGATGGTCAGGAGTCCCACGGGCA...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCAGTGTGCAAAGTGCTTaGCACGCTGCAGGCTTTGGA +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPASVQSA*HAAGFG
Trigger: TCCAAAGCCTGCAGCGTGGCAAGCACTTTGCACACT...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGGCCCCAGTTTGGGTaGGATCTGCTCCCTTGCAGA +
Preference number: 2 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPWPQFG*DLLPCR
Trigger: TCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACAATCCCATGTGGACTaGCCTCGACGTGTTGGGCAC +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEQSHVD*PRRVGH
Trigger: GTGCCCAACACGTCGAGGGCAGTCCACATGGGATTG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCCCAATTCTGCTGTCTaGCACACAGGATGCCATCAA +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAPNSAV*HTGCHQ
Trigger: TTGATGGCATCCTGTGTGGCAGACAGCAGAATTGGG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCCCTGTGTCATTTCTCTaGCTTCTCCACTTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: NSAACQDARGTPDHPMSCPVSFL*LLHLGW
Trigger: CCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGG...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCACTAGCCAATCCCATGTaGACTGCCCTCGACGTGTTG +
Preference number: 2 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASLANPM*TALDVL
Trigger: CAACACGTCGAGGGCAGTCCACATGGGATTGGCTAG...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCCACGCTGCAGGCTTTaGAAAAATGGCAGCTCTCAT +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAPRCRL*KNGSSH
Trigger: ATGAGAGCTGCCATTTTTCCAAAGCCTGCAGCGTGG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGGGGCCACATCCTGGCTaGGGGATCTTCAGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEGPHPG*GIFSKS
Trigger: GGACTTGCTGAAGATCCCCCAGCCAGGATGTGGCCC...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTGGGCAAGATGGCACTaGGGCCAATTAGCTGCCATC +
Preference number: 2 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKWARWH*GQLAAI
Trigger: GATGGCAGCTAATTGGCCCCAGTGCCATCTTGCCCA...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACTTCTCCCTCCACTGTaGATGACAGGGCTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEELLPPL*MTGLSL
Trigger: CAGGGAGAGCCCTGTCATCCACAGTGGAGGGAGAAG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp CTGAGAGCCCTTTGTCCCTGGCAGCTCACCGGAAACATCTTAGACTaGGATCCCGTTCAAAGCCCACTTTCCCCACAGCAGGACTGGGAT +
Preference number: 2 (lower is better)
Translates to: LRALCPWQLTGNILD*DPVQSPLSPQQDWD
Trigger: ATCCCAGTCCTGCTGTGGGGAAAGTGGGCTTTGAACGGGATCCAAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCAACAGGAGCATTTTATaGGGCTGGGCACAAAGAACG +
Preference number: 2 (lower is better)
Translates to: HLISMEAQDCPCHPCPPANRSIL*GWAQRT
Trigger: CGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTT...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCAGTTTGGGTGAGATCTaGTCCCTTGCAGAGAGAACG +
Preference number: 2 (lower is better)
Translates to: NSAACQDARGTPDHPMSCSLGEI*SLAERT
Trigger: CGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACT...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTGGCAAGTCAGGACATaGGACACATGGCACATGCAG +
Preference number: 2 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKWQVRT*DTWHMQ
Trigger: CTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCA...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCAGCAGAGGGGAGGATaGCCAACGTTCACACCTCTG +
Preference number: 2 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEQQRGG*PTFTPL
Trigger: CAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAGTGGGCTCCAAGATCTaGCAAGTCAGGACATGCGAC +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEVGSKI*QVRTCD
Trigger: GTCGCATGTCCTGACTTGCCAGATCTTGGAGCCCAC...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp GACACCAGAACAGAGAGGTCTGGATTTATGTCCTCACTCTCCCACTaGCCGTGTGACCTTGGGCTACCCACCTGGTTCTCTCTGGATCTC +
Preference number: 2 (lower is better)
Translates to: DTRTERSGFMSSLSH*PCDLGLPTWFSLDL
Trigger: GAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGACCTCTCTGTTCTGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTaGGGTGAGATCTGCTCCCTTGCAGAGAGAACGTGGCAGAACAGG +
Preference number: 2 (lower is better)
Translates to: AKRFLGGVKACAGPS*GEICSLAERTWQNR
Trigger: CCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp AAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTaGGCCAGAGGGGTCAACATAAGCAGCCGGCCAAAAGGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: KSGHATHGTCSCQSP*ARGVNISSRPKGFL
Trigger: CAAGAAACCTTTTGGCCGGCTGCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp GGCTGGAGATTAGGCAAGTGGGACAAGGGGCCTGAGCACCTAGGCTaGTCCAGGTCTAGCCGAGGCCAGGAAGTTGTAGATAACACATTA +
Preference number: 2 (lower is better)
Translates to: GWRLGKWDKGPEHLG*SRSSRGQEVVDNTL
Trigger: TAATGTGTTATCTACAACTTCCTGGCCTCGGCTAGACCTGGACAAGCCTAGGTGCTCAGGCCCCTTGTCCCACTTGCCTAATCTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCCCAAGCTGGATTCATaGCACCAGAACAGAGAGGTC +
Preference number: 2 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPPKLDS*HQNREV
Trigger: GACCTCTCTGTTCTGGTGTCATGAATCCAGCTTGGG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAGTGTTGGGCACCCCCTaGAGGTGGTGGCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSVLGTP*RWWQEQ
Trigger: CTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACAC...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCTTGGGCTACCCACCTaGTTCTCTCTGGATCTCAGT +
Preference number: 2 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPLGLPT*FSLDLS
Trigger: ACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTTCTGGGGCCACATCCTaGCTGGGGGATCTTCAGCAA +
Preference number: 2 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSSGATS*LGDLQQ
Trigger: TTGCTGAAGATCCCCCAGCCAGGATGTGGCCCCAGA...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCGGCCAAAAGGTTTCTTaGTGGAGTGAAAGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: NSAACQDARGTPDHPMSCGQKVS*WSESLC
Trigger: GCACAAGCTTTCACTCCACCAAGAAACCTTTTGGCC...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAATTGGCAACAGATGTCTaGCCACATTGGCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEELATDV*PHWLLL
Trigger: GAGCAAGAGCCAATGTGGTCAGACATCTGTTGCCAA...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGGGCACACGGTCAGGTaGCTGGACTGTTTACCCAAA +
Preference number: 2 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSGHTVR*LDCLPK
Trigger: TTTGGGTAAACAGTCCAGGCACCTGACCGTGTGCCC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCTGCATCACACTGATCTaGGGCCACATCCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLCITLI*GHILAG
Trigger: CCCAGCCAGGATGTGGCCCCAGATCAGTGTGATGCA...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACTTGCAGAGAGAACGTaGCAGAACAGGGAACAGGAG +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRLAERT*QNREQE
Trigger: CTCCTGTTCCCTGTTCTGCCACGTTCTCTCTGCAAG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp CCTTGGGCTACCCACCTGGTTCTCTCTGGATCTCAGTTTATTCATTaGTTCTGTGGGGTGGGGACTGCTTTCCTCAGCACCAGTATCCCA +
Preference number: 2 (lower is better)
Translates to: PWATHLVLSGSQFIH*FCGVGTAFLSTSIP
Trigger: TGGGATACTGGTGCTGAGGAAAGCAGTCCCCACCCCACAGAACAAATGAATAAACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp GTTCATAACCAGCACAAGGTTCCATGCTTCCTAGATCCCAGATCTTaGACTCTCAGGACTGGAGGCATCCTCAGCAGCCCTTTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VHNQHKVPCFLDPRS*TLRTGGILSSPLQL
Trigger: GAGCTGCAAAGGGCTGCTGAGGATGCCTCCAGTCCTGAGAGTCAAAGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTGGTTATGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCCTCAACCACCACCTTaGGGAGCCGAGGGGCTAAAG +
Preference number: 2 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHPQPPP*GAEGLK
Trigger: CTTTAGCCCCTCGGCTCCTCAAGGTGGTGGTTGAGG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTAGGCAGGAATTGTTTTaGATCACACTGATCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPRQELF*ITLIWG
Trigger: GCCCCAGATCAGTGTGATGCAAAACAATTCCTGCCT...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCCAGAACAGAGAGGTCTaGATTTATGTCCTCACTCTC +
Preference number: 2 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAQNREV*IYVLTL
Trigger: GAGAGTGAGGACATAAATCCAGACCTCTCTGTTCTG...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCATTCAGGCCTCCCAGGTaGGAGTTAGCCCACCTGGGT +
Preference number: 2 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSFRPPR*ELAHLG
Trigger: ACCCAGGTGGGCTAACTCCCACCTGGGAGGCCTGAA...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGGACTCTGTAATTACTaGGGCACCTGCCCCATAGGG +
Preference number: 2 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAGLCNY*GTCPIG
Trigger: CCCTATGGGGCAGGTGCCTCAGTAATTACAGAGTCC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGACCACATTGGCTCTTaGTCTCCTGTAGGTACATGT +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRDHIGS*SPVGTC
Trigger: ACATGTACCTACAGGAGAGCAAGAGCCAATGTGGTC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCTCCTTTAACCCAAGCTaGATTCATGACACCAGAACA +
Preference number: 2 (lower is better)
Translates to: GLQDLASQDMRHMAHAVASFNPS*IHDTRT
Trigger: TGTTCTGGTGTCATGAATCCAGCTTGGGTTAAAGGA...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCAGGAAAGCTTCTCGTaGGCTCCAAGATCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLQESFS*APRSGK
Trigger: CTTGCCAGATCTTGGAGCCCACGAGAAGCTTTCCTG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTACTATTAACATCATGTaGGGCCTAAGCCCCTGTCTC +
Preference number: 2 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSTINIM*GLSPCL
Trigger: GAGACAGGGGCTTAGGCCTCACATGATGTTAATAGT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTTGTTTTGCATCACACTaGTCTGGGGCCACATCCTGG +
Preference number: 2 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSACFASH*SGATSW
Trigger: CCAGGATGTGGCCCCAGATCAGTGTGATGCAAAACA...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGAGCTGCCCAGAACTTaGCGTCTCAGAAGGGAGATA +
Preference number: 2 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAELPRT*RLRREI
Trigger: TATCTCCCTTCTGAGACGGCAAGTTCTGGGCAGCTC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCAAGAATTCAGCTGCCTaGCAAGATGCCCGTGGGACT +
Preference number: 2 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPKNSAA*QDARGT
Trigger: AGTCCCACGGGCATCTTGGCAGGCAGCTGAATTCTT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAGACATGCAGATTCCTaGATATGTGCCTCAAGTCTT +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEERHADS*ICASSL
Trigger: AAGACTTGAGGCACATATGCAGGAATCTGCATGTCT...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAACCTTTCATCTTTCCTaGCTGCCTCACAGTCAAACA +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRTFHLS*LPHSQT
Trigger: TGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGT...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAATCGTGTCAAAGGTGTaGGTTGCTGCTTATGGAATG +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRIVSKV*VAAYGM
Trigger: CATTCCATAAGCAGCAACCCACACCTTTGACACGAT...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGATTCTCTGGCCCAGGATaGGAGAATTCAAGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGFSGPG*ENSSAP
Trigger: TGGGGCACTTGAATTCTCTCATCCTGGGCCAGAGAA...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTAAGTGCTATCTGTGTTaGTCCTCAATGGATGAGCAG +
Preference number: 2 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSKCYLC*SSMDEQ
Trigger: CTGCTCATCCATTGAGGATCAACACAGATAGCACTT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAAGAGCTCCAGTCTCCTaGCAGGTCTCAAGCTCAAAC +
Preference number: 2 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGRAPVS*QVSSSN
Trigger: GTTTGAGCTTGAGACCTGGCAGGAGACTGGAGCTCT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCCCACCCCAGCGCTTTaGTTGAAAACACTTACCAAG +
Preference number: 2 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPPTPAL*LKTLTK
Trigger: CTTGGTAAGTGTTTTCAACCAAAGCGCTGGGGTGGG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTGTGCTGGCCCCAGTTTaGGTGAGATCTGCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSVLAPV*VRSAPL
Trigger: CAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCAC...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCCCCAGCGCTTTGGTTaGAAACACTTACCAAGAGCT +
Preference number: 2 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHPQRFG*KHLPRA
Trigger: AGCTCTTGGTAAGTGTTTTCAACCAAAGCGCTGGGG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTCATGGCACATGCAGTTaGCAGAGCCCTTTGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSHGTCS*QSPLAR
Trigger: TCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATG...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGATCTCACGCCATACTCTaGCCCAAACAGAGAGGAATC +
Preference number: 2 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGSHAIL*PKQRGI
Trigger: GATTCCTCTCTGTTTGGGGCAGAGTATGGCGTGAGA...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAATTTGTTCTGTGGGGTaGGGACTGCTTTCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGICSVG*GLLSSA
Trigger: TGCTGAGGAAAGCAGTCCCCACCCCACAGAACAAAT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR TCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCTATTATCCATCAAGTaGAGGGTCCTTTCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPLLSIK*RVLSAV
Trigger: GACAGCAGAAAGGACCCTTCACTTGATGGATAATAG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAGCATGAAGAAAATATaGTTAGGGTCTTTCAATGCA +
Preference number: 2 (lower is better)
Translates to: FPPPHAFNPMAACGSWEESMKKI*LGSFNA
Trigger: TGCATTGAAAGACCCTAAGCATATTTTCTTCATGCT...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACAGGCTTTGGAAAAATaGCAGCTCTCATTACTATTA +
Preference number: 2 (lower is better)
Translates to: PTCPREPFITQSAFVRGRQALEK*QLSLLL
Trigger: TAATAGTAATGAGAGCTGCCATTTTTCCAAAGCCTG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCAAAAGGTTTCTTGGTaGAGTGAAAGCTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPQKVSW*SESLCW
Trigger: CCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATTATTCATTTGTTCTGTaGGGTGGGGACTGCTTTCCT +
Preference number: 2 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHYSFVL*GGDCFP
Trigger: AGGAAAGCAGTCCCCACCCCACAGAACAAATGAATA...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAAGTGTCTCCTCTCTGTaGGCCTTATTATTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGSVSSL*ALLFLL
Trigger: TAGGAGGAATAATAAGGCCCACAGAGAGGAGACACT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 90 bp CCACACAGGATGCCATCAAAGCTGCAATTCCCTGGAGAACTTCTCTaGTCCTTCACAGCATTTTCAATAGACTTTCCTTTTGGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: PHRMPSKLQFPGELL*SFTAFSIDFPFGRR
Trigger: CCTTCTACCAAAAGGAAAGTCTATTGAAAATGCTGTGAAGGACAAGAGAAGTTCTCCAGGGAATTGCAGCTTTGATGGCATCCTGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTATATTCTAGAGATGACTaGACATCACGCTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLYSRDD*TSRWPG
Trigger: GCCTGGCCAGCGTGATGTGCAGTCATCTCTAGAATA...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTAACACGGTCAGGTGCCTaGACTGTTTACCCAAATGCT +
Preference number: 2 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLTRSGA*TVYPNA
Trigger: AGCATTTGGGTAAACAGTCCAGGCACCTGACCGTGT...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTAGCCTGGCATTGCATGTaGTCAGTAATTACAAGCTGC +
Preference number: 2 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLAWHCM*SVITSC
Trigger: GCAGCTTGTAATTACTGAGCACATGCAATGCCAGGC...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACAGCACAAGGTTCCATaGTTCCTAGATCCCAGATCT +
Preference number: 2 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLQHKVP*FLDPRS
Trigger: AGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTAATCTAGCATTGCACTaGTTGTCCCATCTTGATAAT +
Preference number: 2 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSNLALH*LSHLDN
Trigger: ATTATCAAGATGGGACAAGCAGTGCAATGCTAGATT...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR GCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTAGAAAAGTCTAAGAAGTaGACACAAATTTCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLEKSKK*TQISQS
Trigger: GCTCTGAGAAATTTGTGTGCACTTCTTAGACTTTTC...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTaGAGGTGGTGGCAGGAGCAGTTGGGTGTGGCCGAA +
Preference number: 3 (lower is better)
Translates to: PMWTALDVLGTP*RWWQEQLGVAE
Trigger: TTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GTGGGCACACTGCCCCTGCTCAAACACCTCTCCCGATaGGAAACCTGCCACCCTTGGGGGCTCCGGGCCATC +
Preference number: 3 (lower is better)
Translates to: VGTLPLLKHLSR*ETCHPWGLRAI
Trigger: GATGGCCCGGAGCCCCCAAGGGTGGCAGGTTTCCCATCGGGAGAGGTGTTTGAGCAGGGGCAGTGTGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp CCACCCAAAGGCAGCAGTCAAGCCCAGCTGGGTCATTaGAGGGGGCGCTGTGAGGGGTGGTGGTGGTTGTGG +
Preference number: 3 (lower is better)
Translates to: PPKGSSQAQLGH*RGRCEGWWWLW
Trigger: CCACAACCACCACCACCCCTCACAGCGCCCCCTTCAATGACCCAGCTGGGCTTGACTGCTGCCTTTGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp TTCCCAGGCCGCGGGTGCATCCAGCAGAGGGGAGGATaGCCAACGTTCACACCTCTGGCTCCCAAATCCAGC +
Preference number: 3 (lower is better)
Translates to: FPGRGCIQQRGG*PTFTPLAPKSS
Trigger: GCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCACCCGCGGCCTGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp TGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGCAGTTaGGTGTGGCCGAAGACCCCTGTGTCATTTCTCTGG +
Preference number: 3 (lower is better)
Translates to: CWAPPGGGGRSS*VWPKTPVSFLW
Trigger: CCAGAGAAATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CAGGGAAACCCACGAAGCTATAAAGTTGGGGTGCACTaGGCTGGGAGTCAGCAGGCCCACCCGGCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: QGNPRSYKVGVH*AGSQQAHPAVQ
Trigger: CTGCACAGCCGGGTGGGCCTGCTGACTCCCAGCCCAGTGCACCCCAACTTTATAGCTTCGTGGGTTTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CCTTTGGCTGAATCAGCCCCTGCCCACCCCAGCCACTaGGGACCCAAGATGTCTGAGAGCCCTTTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PLAESAPAHPSH*GPKMSESPLSL
Trigger: CAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGTGGCTGGGGTGGGCAGGGGCTGATTCAGCCAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GGCCAGGCACAGGGTAAGAGACATGAGAGACGTGGCTaGTCAGCAGGGTTGGGTCACGAAGGGTCTAGCGGA +
Preference number: 3 (lower is better)
Translates to: GQAQGKRHERRG*SAGLGHEGSSG
Trigger: TCCGCTAGACCCTTCGTGACCCAACCCTGCTGACCAGCCACGTCTCTCATGTCTCTTACCCTGTGCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp GAATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTaGCCATCCCATGAGCTGCCCAGAACTTGCCGTCTC +
Preference number: 3 (lower is better)
Translates to: EFSCLPRCPWDS*PSHELPRTCRL
Trigger: GAGACGGCAAGTTCTGGGCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp TCCTACCACTTCTTCAGCCAGTGGGCACACTGCCCCTaGTCAAACACCTCTCCCGATGGGAAACCTGCCACC +
Preference number: 3 (lower is better)
Translates to: SYHFFSQWAHCP*SNTSPDGKPAT
Trigger: GGTGGCAGGTTTCCCATCGGGAGAGGTGTTTGAGCAGGGGCAGTGTGCCCACTGGCTGAAGAAGTGGTAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GCTGGGAGTCAGCAGGCCCACCCGGCTGTGCAGCCTTaGAGAAGTGTCTCCTCTCTGTGGGCCTTATTATTC +
Preference number: 3 (lower is better)
Translates to: AGSQQAHPAVQP*RSVSSLWALLF
Trigger: GAATAATAAGGCCCACAGAGAGGAGACACTTCTCCAAGGCTGCACAGCCGGGTGGGCCTGCTGACTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CAGCTCCCTGGCAGCCTGATTCTTCTCCCTCCACTGTaGATGACAGGGCTCTCCCTGTCTTCATCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: QLPGSLILLPPL*MTGLSLSSSGC
Trigger: GCAGCCAGATGAAGACAGGGAGAGCCCTGTCATCCACAGTGGAGGGAGAAGAATCAGGCTGCCAGGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp ACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTaGGACAAGGGGCCTGAGCACCTAGGCTTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: TVTMALGWRLGK*DKGPEHLGLSR
Trigger: CCTGGACAAGCCTAGGTGCTCAGGCCCCTTGTCCCACTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCTCCTCACTCTCCCACTaGCCGTGTGACCTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: GLQDLASQDMRHMAHAVASSLSH*PCDLGL
Trigger: TAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGA...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTGTGCTGGCCCCAGTTaGGGTGAGATCTGCTCCCTT +
Preference number: 3 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKCAGPS*GEICSL
Trigger: AAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACA...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGACATGGCACATGCAGTaGCCAGAGCCCTTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKTWHMQ*PEPFGQ
Trigger: CTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGT...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACATGGAGGCCCAAGATaGTCCATGTCACCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEHGGPR*SMSPLP
Trigger: GGGCAGGGGTGACATGGACAATCTTGGGCCTCCATG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp ATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTaGCCTCCAGCCCTAGAACTGCCCAGGCAGGAATCA +
Preference number: 3 (lower is better)
Translates to: ISMEAQDCPCHP*PPALELPRQES
Trigger: TGATTCCTGCCTGGGCAGTTCTAGGGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATaGCACATGCAGTTGCCAGAGCCCTTTGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GSKIWQVRTCDT*HMQLPEPFGQR
Trigger: CCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CACCCTTGGGGGCTCCGGGCCATCCCCAGACAGCTTTaGCTTGGTGGAAATTATGCCACTGGTGGAACTAAG +
Preference number: 3 (lower is better)
Translates to: HPWGLRAIPRQL*LGGNYATGGTK
Trigger: CTTAGTTCCACCAGTGGCATAATTTCCACCAAGCCAAAGCTGTCTGGGGATGGCCCGGAGCCCCCAAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTATCCTCAGCAGCCCTTaGCAGCTCCCTGGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSILSSP*QLPGSL
Trigger: CAGGCTGCCAGGGAGCTGCAAAGGGCTGCTGAGGAT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp CGTGGCAGAACAGGGAACAGGAGGCAGGAATTGTTTTaGATCACACTGATCTGGGGCCACATCCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: RGRTGNRRQELF*ITLIWGHILAG
Trigger: CCCAGCCAGGATGTGGCCCCAGATCAGTGTGATGCAAAACAATTCCTGCCTCCTGTTCCCTGTTCTGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp GGCAAGTCAGGACATGCGACACATGGCACATGCAGTTaGCAGAGCCCTTTGGCCAGAGGGGTCAACATAAGC +
Preference number: 3 (lower is better)
Translates to: GKSGHATHGTCS*QSPLARGVNIS
Trigger: GCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATaGAGTTGCCAGAGCCCTTTGGCCAGAGGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: RSGKSGHATHGT*SCQSPLARGVN
Trigger: GTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp CAACTCTCCTACCACTTCTTCAGCCAGTGGGCACACTaGCCCTGCTCAAACACCTCTCCCGATGGGAAACCT +
Preference number: 3 (lower is better)
Translates to: QLSYHFFSQWAH*PCSNTSPDGKP
Trigger: AGGTTTCCCATCGGGAGAGGTGTTTGAGCAGGGGCAGTGTGCCCACTGGCTGAAGAAGTGGTAGGAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp TACAGTAAAGCTCTAGAGTGTCTAGCCAATCCCATGTaGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: YSKALECLANPM*TALDVLGTPWR
Trigger: CCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGGATTGGCTAGACACTCTAGAGCTTTACTGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTaGGTCCTGGGAAGAAAGCCAAGCACCTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: PTSTCFQSHGSL*VLGRKPSTSSP
Trigger: TGGAGATGAGGTGCTTGGCTTTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAACTGCCCTCGACGTGTaGGGCACCCCCTGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSTALDV*GTPWRW
Trigger: CCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGT...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp TGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTaGGATCTGCTCCCTTGCAGAGAGAACGTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: WWSESLCWPQFG*DLLPCRENVAE
Trigger: TTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp CCTTTCTGCTGTCAGGTTCCAGGACTCTGTAATTACTaGGGCACCTGCCCCATAGGGTTTCAGGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: PFCCQVPGLCNY*GTCPIGFQASQ
Trigger: CTGGGAGGCCTGAAACCCTATGGGGCAGGTGCCTCAGTAATTACAGAGTCCTGGAACCTGACAGCAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp CAGAGAGGTCTGGATTTATGTCCTCACTCTCCCACTTaGCGTGTGACCTTGGGCTACCCACCTGGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: QRGLDLCPHSPT*RVTLGYPPGSL
Trigger: GAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGACCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp GTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGATCTaGTCCCTTGCAGAGAGAACGTGGCAGAACAGGGAA +
Preference number: 3 (lower is better)
Translates to: VKACAGPSLGEI*SLAERTWQNRE
Trigger: TTCCCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp CTTCTCGTGGGCTCCAAGATCTGGCAAGTCAGGACATaGGACACATGGCACATGCAGTTGCCAGAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LLVGSKIWQVRT*DTWHMQLPEPF
Trigger: AAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCCACGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GCAAGATGTCAACTCTCCTACCACTTCTTCAGCCAGTaGGCACACTGCCCCTGCTCAAACACCTCTCCCGAT +
Preference number: 3 (lower is better)
Translates to: ARCQLSYHFFSQ*AHCPCSNTSPD
Trigger: ATCGGGAGAGGTGTTTGAGCAGGGGCAGTGTGCCCACTGGCTGAAGAAGTGGTAGGAGAGTTGACATCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp ACTGGGGACCCAAGATGTCTGAGAGCCCTTTGTCCCTaGCAGCTCACCGGAAACATCTTAGACTTGGATCCC +
Preference number: 3 (lower is better)
Translates to: TGDPRCLRALCP*QLTGNILDLDP
Trigger: GGGATCCAAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGCCACGCTGCAGGCTTaGGAAAAATGGCAGCTCTCA +
Preference number: 3 (lower is better)
Translates to: PTCPREPFITQSAFVRGRATLQA*EKWQLS
Trigger: TGAGAGCTGCCATTTTTCCAAAGCCTGCAGCGTGGC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp GTCTGGATTTATGTCCTCACTCTCCCACTTGCCGTGTaGCCTTGGGCTACCCACCTGGTTCTCTCTGGATCT +
Preference number: 3 (lower is better)
Translates to: VWIYVLTLPLAV*PWATHLVLSGS
Trigger: AGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp CTGCCAGGTCTCAAGCTCAAACACGTCCATCAGGGCTaGGCTGTAAAGAATTCAGCTGCCTGCCAAGATGCC +
Preference number: 3 (lower is better)
Translates to: LPGLKLKHVHQG*AVKNSAACQDA
Trigger: GGCATCTTGGCAGGCAGCTGAATTCTTTACAGCTCAGCCCTGATGGACGTGTTTGAGCTTGAGACCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp GTGAGAGGTAGAGGACCCAGGGCCACAATAACATGCTaGCCGACCTTAAGCAGATCACTTTACCTGCTGGGT +
Preference number: 3 (lower is better)
Translates to: VRGRGPRATITC*PTLSRSLYLLG
Trigger: ACCCAGCAGGTAAAGTGATCTGCTTAAGGTCGGGCAGCATGTTATTGTGGCCCTGGGTCCTCTACCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CAGGAGGGACCCTCAATGTCATCTACACCAGGCCCTTaGCAAGATGTCAACTCTCCTACCACTTCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: QEGPSMSSTPGP*QDVNSPTTSSA
Trigger: GGCTGAAGAAGTGGTAGGAGAGTTGACATCTTGCCAAGGGCCTGGTGTAGATGACATTGAGGGTCCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CCACTTGGAGAAAGGGTGAGGATAGCCGATGCTCCCTaGAAAGAGCCAAGTAGGGGGTCAATCAGTTCTCGT +
Preference number: 3 (lower is better)
Translates to: PLGERVRIADAP*KEPSRGSISSR
Trigger: ACGAGAACTGATTGACCCCCTACTTGGCTCTTTCCAGGGAGCATCGGCTATCCTCACCCTTTCTCCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACCCACCTCTCAGCCTTaGATTTGGCAGGAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: PTCPREPFITQSAFVRGRPTSQP*IWQESF
Trigger: GAAGCTTTCCTGCCAAATCAAAGGCTGAGAGGTGGG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp TTCGTGAGAGGTAGAGGACCCAGGGCCACAATAACATaGTGCCCGACCTTAAGCAGATCACTTTACCTGCTG +
Preference number: 3 (lower is better)
Translates to: FVRGRGPRATIT*CPTLSRSLYLL
Trigger: CAGCAGGTAAAGTGATCTGCTTAAGGTCGGGCAGCATGTTATTGTGGCCCTGGGTCCTCTACCTCTCACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTAACAGGAGGCAGGAATaGTTTTGCATCACACTGATC +
Preference number: 3 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPNRRQE*FCITLI
Trigger: GATCAGTGTGATGCAAAACAATTCCTGCCTCCTGTT...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCATGGTGGAGTGAAAGCTaGTGCTGGCCCCAGTTTGGG +
Preference number: 3 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSWWSES*CWPQFG
Trigger: CCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCA...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACACCTGCCTCCCCACTaGGCTGCTGTGCCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLHLPPH*AAVPPQ
Trigger: CTGGGGAGGCACAGCAGCCAAGTGGGGAGGCAGGTG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp CTGGAGGAAGTGCTATCTGTGTTGATCCTCAATGGATaGGCAGTTACAGGGGAGAGAAGGGAGTTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: LEEVLSVLILNG*AVTGERREFPG
Trigger: CCCTGGAAACTCCCTTCTCTCCCCTGTAACTGCTCATCCATTGAGGATCAACACAGATAGCACTTCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp GAGGGACAGGAACTTGCCCAAGGTCATCCAGCAAAGTaGAGGAGTATCCAGAGTATCTCCGGAAAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: EGQELAQGHPAK*RSIQSISGKEE
Trigger: CTCTTCCTTTCCGGAGATACTCTGGATACTCCTTCACTTTGCTGGATGACCTTGGGCAAGTTCCTGTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp CTGGCCCAGGATGAGAGAATTCAAGTGCCCCAGACATaGAGATTCCTGCATATGTGCCTCAAGTCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: LAQDERIQVPQT*RFLHMCLKSFG
Trigger: CCCAAAAGACTTGAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp ATGGTGGTTCTCTGGCCCAGGATGAGAGAATTCAAGTaGCCCAGACATGCAGATTCCTGCATATGTGCCTCA +
Preference number: 3 (lower is better)
Translates to: MVVLWPRMREFK*PRHADSCICAS
Trigger: TGAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTGGGCCAGAGAACCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp AGTTTGGGTGAGATCTGCTCCCTTGCAGAGAGAACGTaGCAGAACAGGGAACAGGAGGCAGGAATTGTTTTG +
Preference number: 3 (lower is better)
Translates to: SLGEICSLAERT*QNREQEAGIVL
Trigger: CAAAACAATTCCTGCCTCCTGTTCCCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GTCAGCAAGTTGAGTTCATTTCAGACCCTGGCCAGCTaGTGGTCCTCAGAGATCAGTGAACTTTGGCAACAG +
Preference number: 3 (lower is better)
Translates to: VSKLSSFQTLAS*WSSEISELWQQ
Trigger: CTGTTGCCAAAGTTCACTGATCTCTGAGGACCACCAGCTGGCCAGGGTCTGAAATGAACTCAACTTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp ATAGTGCACTGCACGATCCGTTTGATGTCCAACTTCTaGGCCTGCTTTATAAGTCAGCTAAGCCCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: IVHCTIRLMSNF*ACFISQLSPFP
Trigger: CGGGAAGGGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp TGTGCCTCAAGTCTTTTGGGTCATAAGTCAGCAAGTTaGGTTCATTTCAGACCCTGGCCAGCTGGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: CASSLLGHKSAS*VHFRPWPAGGP
Trigger: AGGACCACCAGCTGGCCAGGGTCTGAAATGAACTCAACTTGCTGACTTATGACCCAAAAGACTTGAGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CCGGCTGTGCAGCCTTGGAGAAGTGTCTCCTCTCTGTaGGCCTTATTATTCCTCCTACTGTTACTATTATCC +
Preference number: 3 (lower is better)
Translates to: PAVQPWRSVSSL*ALLFLLLLLLS
Trigger: GGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGACACTTCTCCAAGGCTGCACAGCCGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp CTTCCTGGAGGAAGTGCTATCTGTGTTGATCCTCAATaGATGAGCAGTTACAGGGGAGAGAAGGGAGTTTCC +
Preference number: 3 (lower is better)
Translates to: LPGGSAICVDPQ*MSSYRGEKGVS
Trigger: GGAAACTCCCTTCTCTCCCCTGTAACTGCTCATCCATTGAGGATCAACACAGATAGCACTTCCTCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCGAGGCAGGAATTGTTTaGCATCACACTGATCTGGGG +
Preference number: 3 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPEAGIV*HHTDLG
Trigger: CCCCAGATCAGTGTGATGCAAAACAATTCCTGCCTC...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp TCACAGTCACTGAAAAACTATCACCAGCCCCAATTCTaGTGTCTGCCACACAGGATGCCATCAAAGCTGCAA +
Preference number: 3 (lower is better)
Translates to: SQSLKNYHQPQF*CLPHRMPSKLQ
Trigger: TTGCAGCTTTGATGGCATCCTGTGTGGCAGACAGCAGAATTGGGGCTGGTGATAGTTTTTCAGTGACTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp AGAGCCTGGCATTGCATGTGCTCAGTAATTACAAGCTaGATTAATTTACCTTCTTGGCTCAGTGCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: RAWHCMCSVITS*INLPSWLSAWH
Trigger: GTGCCAGGCACTGAGCCAAGAAGGTAAATTAATGCAGCTTGTAATTACTGAGCACATGCAATGCCAGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp GAACTTTGGCAACAGATGTCTGACCACATTGGCTCTTaGTCTCCTGTAGGTACATGTCTACTCCATCGGTTA +
Preference number: 3 (lower is better)
Translates to: ELWQQMSDHIGS*SPVGTCLLHRL
Trigger: TAACCGATGGAGTAGACATGTACCTACAGGAGAGCAAGAGCCAATGTGGTCAGACATCTGTTGCCAAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGCTCTCAGCCTTTGATTaGGCAGGAAAGCTTCTCGTG +
Preference number: 3 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKLSAFD*AGKLLV
Trigger: CACGAGAAGCTTTCCTGCCAAATCAAAGGCTGAGAG...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp TTTCAAATACATGAATCTGAAGCCTGTGTTGCACAGTaGATCAACTCGGGGACAAGCTCTGTGAGGCTCAAG +
Preference number: 3 (lower is better)
Translates to: FQIHESEACVAQ*INSGTSSVRLK
Trigger: CTTGAGCCTCACAGAGCTTGTCCCCGAGTTGATTCACTGTGCAACACAGGCTTCAGATTCATGTATTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp AGTCACATTTTTGCCAAGGATAAACCAACTCCAGCCTaGATTGAGGTCAAGTTCAGTTTAGAGCATGGTGCC +
Preference number: 3 (lower is better)
Translates to: SHIFAKDKPTPA*IEVKFSLEHGA
Trigger: GGCACCATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGCAAAAATGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp ATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTaGATATGTGCCTCAAGTCTTTTGGGTCATAAGTCA +
Preference number: 3 (lower is better)
Translates to: MREFKCPRHADS*ICASSLLGHKS
Trigger: TGACTTATGACCCAAAAGACTTGAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTaGAAGAAATGTCAGTTAGTGGTGGATAGATCGTGT +
Preference number: 3 (lower is better)
Translates to: GAFYEAGHKERF*KKCQLVVDRSC
Trigger: ACACGATCTATCCACCACTAACTGACATTTCTTCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAAATGCAAGGACAAATTaGTTCATAACCAGCACAAGG +
Preference number: 3 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSNARTN*FITSTR
Trigger: CCTTGTGCTGGTTATGAACAAATTTGTCCTTGCATT...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR TCA 72 bp GAGGTGAGGGGCAGAGGTGATAAGAGAACAACATCATaGATACCTTTCAAATACATGAATCTGAAGCCTGTG +
Preference number: 3 (lower is better)
Translates to: EVRGRGDKRTTS*IPFKYMNLKPV
Trigger: CACAGGCTTCAGATTCATGTATTTGAAAGGTATTCATGATGTTGTTCTCTTATCACCTCTGCCCCTCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp AAGGACAAATTTGTTCATAACCAGCACAAGGTTCCATaGTTCCTAGATCCCAGATCTTTGACTCTCAGGACT +
Preference number: 3 (lower is better)
Translates to: KDKFVHNQHKVP*FLDPRSLTLRT
Trigger: AGTCCTGAGAGTCAAAGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTGGTTATGAACAAATTTGTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CCA 72 bp GACATGCAGATTCCTGCATATGTGCCTCAAGTCTTTTaGGTCATAAGTCAGCAAGTTGAGTTCATTTCAGAC +
Preference number: 3 (lower is better)
Translates to: DMQIPAYVPQVF*VISQQVEFISD
Trigger: GTCTGAAATGAACTCAACTTGCTGACTTATGACCCAAAAGACTTGAGGCACATATGCAGGAATCTGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR GCA 72 bp TCTGGAAAAATAACAATGTTCATAGAACTTGATCATTaGAGAGCCAGGAGGGACCCTCAATGTCATCTACAC +
Preference number: 3 (lower is better)
Translates to: SGKITMFIELDH*RARRDPQCHLH
Trigger: GTGTAGATGACATTGAGGGTCCCTCCTGGCTCTGCAATGATCAAGTTCTATGAACATTGTTATTTTTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR-3UTR CAA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACCTGGAGAACTTCTCTaGTCCTTCACAGCATTTTCA +
Preference number: 3 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLPGELL*SFTAFS
Trigger: TGAAAATGCTGTGAAGGACAAGAGAAGTTCTCCAGG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGGGGCAGGGCTGTGTATaGCCTGCCCGGCGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQEGQGCV*PARRVC
Trigger: ACACACCCGCCGGGCAGGCCATACACAGCCCTGCCC...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTCTGGGGCGACCGGCTaGCCCCGAGCCCGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQISGATG*PRARLR
Trigger: TCTGAGCCGGGCTCGGGGGCAGCCGGTCGCCCCAGA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTGCCCGGCGGGTGTGTaGTCCACCTCCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQICPAGV*STSSPA
Trigger: GGCAGGGCTGGAGGTGGACCACACACCCGCCGGGCA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCGGCAGCTGGGGTCACTaGGGCCGGGCTCGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIGSWGH*GRARRG
Trigger: ACCTCGACGAGCCCGGCCCCAGTGACCCCAGCTGCC...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGTCCCGGGGTTATGCTaGGCACCCGGGGCACGCAAG +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAVPGLC*APGARK
Trigger: CTTGCGTGCCCCGGGTGCCCAGCATAACCCCGGGAC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCGGCGCGCGGGGTTCCTaGGGCAGAACCGAGAACCCG +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCGARGS*GRTENP
Trigger: CGGGTTCTCGGTTCTGCCCCAGGAACCCCGCGCGCC...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGGCGCTCAACCTCGCTaGCCGAGCCCCCGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASGAQPR*PSPRVL
Trigger: CAGCACCCGGGGGCTCGGCCAGCGAGGTTGAGCGCC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGTCCCCGAGCTGTGGGTaGGCTGCAGGGGCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKSPSCG*AAGAAG
Trigger: CCCCGCTGCCCCTGCAGCCCACCCACAGCTCGGGGA...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGCGGTCCCCGAGCTGTaGGTGGGCTGCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASAVPEL*VGCRGS
Trigger: GCTGCCCCTGCAGCCCACCCACAGCTCGGGGACCGC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGGTGCTGGCCCCAGTTTaGGTGAGATCTGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQEVLAPV*VRSAPL
Trigger: CAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCAC...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp GGCTCTGGCTTCCTCTGTTCTGGGCTAGAGCCTCCTTaGGCTGAATCAGCCCCTGCCCACCCCAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: GSGFLCSGLEPP*AESAPAHPSHW
Trigger: CCAGTGGCTGGGGTGGGCAGGGGCTGATTCAGCCAAAGGAGGCTCTAGCCCAGAACAGAGGAAGCCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAGCTCCAGCCGCAGGATaGTGGGCGCCCTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEAPAAG*WAPSGA
Trigger: CGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGC...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGTGCTGCAGCAGGGTTTaGTTCAGGGCAAACAGCACC +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQECCSRV*FRANST
Trigger: GGTGCTGTTTGCCCTGAACCAAACCCTGCTGCAGCA...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACCGTGCGGCAGCAGCTaGCAGCTGGCCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEPCGSS*QLARAE
Trigger: CTCGGCCCTGGCCAGCTGCCAGCTGCTGCCGCACGG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGACCCTGGCCAGCTGGTaGTCCTCAGAGATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQETLASW*SSEISE
Trigger: TTCACTGATCTCTGAGGACCACCAGCTGGCCAGGGT...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCCCTCTGGGGCGTGGCTaGCTGTCCCTGTCGGACCTG +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAPLGRG*LSLSDL
Trigger: CAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGG...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCTGCAGGTTTTCCCCGTaGGGCAGCAGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPACRFSP*GSSWQL
Trigger: CAGCTGCCAGCTGCTGCCGCACGGGGAAAACCTGCA...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCTGCCCTCGACGTGTTaGGCACCCCCTGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQILPSTC*APPGGG
Trigger: ACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAG...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCCTCCCACTTGCCGTGTaGCCTTGGGCTACCCACCTG +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCLPLAV*PWATHL
Trigger: CAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAG...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCATGCCCGTGGGACTCCTaGCCATCCCATGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASCPWDS*PSHELP
Trigger: GGGCAGCTCATGGGATGGTCAGGAGTCCCACGGGCA...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGAGAGGGACAGGAACTTaGCCAAGGTCATCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQERGTGT*PRSSSK
Trigger: TTTGCTGGATGACCTTGGGCAAGTTCCTGTCCCTCT...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGGGGTGGTGAGGCGGTaGTGCTGTCCTCGATGCGGA +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASGVVRR*CCPRCG
Trigger: TCCGCATCGAGGACAGCACCACCGCCTCACCACCCC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGGGCGCTGTGAGGGGTaGTGGTGGTTGTGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASGRCEG*WWLWVE
Trigger: CTCCACCCACAACCACCACCACCCCTCACAGCGCCC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGAACAGGAGCATTTTATaGGGCTGGGCACAAAGAACG +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQENRSIL*GWAQRT
Trigger: CGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTT...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGCCCAGCTGGGTCATTaGAGGGGGCGCTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRAQLGH*RGRCEG
Trigger: CCCCTCACAGCGCCCCCTTCAATGACCCAGCTGGGC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGGGGCTGTGTATGGCCTaGCCGGCGGGTGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEGLCMA*PAGVWS
Trigger: GGACCACACACCCGCCGGGCAGGCCATACACAGCCC...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCTGGGGCCAATTAGCTaGCATCAAGCCTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPALGPIS*HQACQG
Trigger: TCCCTGGCAGGCTTGATGGCAGCTAATTGGCCCCAG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCCGTTGTTGAGGGGATaGCACTGCTCCTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIPLLRG*HCSSTC
Trigger: GCAGGTGGAGGAGCAGTGCCATCCCCTCAACAACGG...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGCCAAACTCCTCCAGCTaGCTGAGGCTGTCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKPNSSS*LRLSGS
Trigger: GCTCCCCGACAGCCTCAGCCAGCTGGAGGAGTTTGG...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGTCCCTGTCGGACCTaGGGGTTTCTCTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPCPCRT*GFLWGR
Trigger: CCGGCCCCAGAGAAACCCCCAGGTCCGACAGGGACA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGCGCCCTCTGGGGCGTaGCTGACTGTCCCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRAPSGA*LTVPVG
Trigger: TCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAATGCTGGGCGCCCTCTaGGGCGTGGCTGACTGTCCC +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRMLGAL*GVADCP
Trigger: GGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCAT...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTGCACGGAGTTTCCTCTaGAGCACGGGGCTCCAGCCG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPARSFL*STGLQP
Trigger: CGGCTGGAGCCCCGTGCTCCAGAGGAAACTCCGTGC...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACGATGGTGGTGGCGATaGCGGGGAGAAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRRWWWR*RGEGPG
Trigger: CCCTGGGCCTTCTCCCCGCCATCGCCACCACCATCG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCGGAAGCAGACAGCGATaGTGGTGGCGATGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAGSRQR*WWRWRG
Trigger: TCCCCGCCATCGCCACCACCATCGCTGTCTGCTTCC...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTCTGGCTTCTCCACTTaGGGTGGCCGAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQISGFST*GGRGQE
Trigger: CTCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGTCTCAGCCTTTGATTTaGCAGGAAAGCTTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQESQPLI*QESFSW
Trigger: CCACGAGAAGCTTTCCTGCCAAATCAAAGGCTGAGA...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAATCCACAGGAGGTCACTaGTGTCCCGGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEESTGGH*CPGFPS
Trigger: GGAGGGGAACCCGGGACATCAGTGACCTCCTGTGGA...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTCCCTCCACTGTGGATaGCAGGGCTCTCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQISLHCG*QGSPCL
Trigger: AAGACAGGGAGAGCCCTGTCATCCACAGTGGAGGGA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCACCTCCAGCCCTGCCTaGCGCAGGATGTCGATGACT +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVATSSPA*RRMSMT
Trigger: AGTCATCGACATCCTGCGGCAGGCAGGGCTGGAGGT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCGAGGGCCCAAGGCTATaGAGCAGGAAGCAGACAGCG +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAEGPRL*SRKQTA
Trigger: CGCTGTCTGCTTCCTGCTGCATAGCCTTGGGCCCTC...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGCAGTTTAGAGCATGGTaGCCACAGGGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKQFRAW*PQGWLG
Trigger: GCCCAGCCAGCCCTGTGGGCACCATGCTCTAAACTG...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGTGTGGGGACAGGGCTaGATCCTCATCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASVWGQG*ILILWW
Trigger: CCACCAGAGGATGAGGATCCAGCCCTGTCCCCACAC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCCAGCCGCAGGATGCTaGGCGCCCTCTGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPPAAGC*APSGAW
Trigger: CCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACTTCTCCACTTGGGGTaGCCGAGGTCAGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRLLHLG*PRSGGP
Trigger: GGGCCCTCCTGACCTCGGCCACCCCAAGTGGAGAAG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTGGTGGCAGGAGCAGTTaGGTGTGGCCGAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPGGRSS*VWPKTP
Trigger: AGGGGTCTTCGGCCACACCCAACTGCTCCTGCCACC...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCATGCCTGGCACAGATCTaGGCACACGGTCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASCLAQI*AHGQVP
Trigger: AGGCACCTGACCGTGTGCCCAGATCTGTGCCAGGCA...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGAAGACCTGGGGACATaGCCATTCCAACATGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAEDLGT*PFQHAP
Trigger: TGGGGCATGTTGGAATGGCCATGTCCCCAGGTCTTC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCATAGCCGATGCTCCCTaGAAAGAGCCAAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAIADAP*KEPSRG
Trigger: CCCCCTACTTGGCTCTTTCCAGGGAGCATCGGCTAT...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCTTCTCTGGCCCAGGATaGGAGAATTCAAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAFSGPG*ENSSAP
Trigger: TGGGGCACTTGAATTCTCTCATCCTGGGCCAGAGAA...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAGGGGACAGCGGCAGCTaGGGTCACTGGGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGGDSGS*GHWGRA
Trigger: AGCCCGGCCCCAGTGACCCCAGCTGCCGCTGTCCCC...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCGTCACCTGCTCGTGTaGCGGGAGGGTGGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPRHLLV*REGGVD
Trigger: ATCAACACCACCCTCCCGCCACACGAGCAGGTGACG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGGAGCAGTTGGGTGTaGCCGAAGACCCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVARSSWV*PKTPVS
Trigger: TGACACAGGGGTCTTCGGCCACACCCAACTGCTCCT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCTTGCAGAGAGAACGTaGCAGAACAGGGAACAGGAG +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPALAERT*QNREQE
Trigger: CTCCTGTTCCCTGTTCTGCCACGTTCTCTCTGCAAG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGCAGACCCTGGCCAGCTaGTGGTCCTCAGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKQTLAS*WSSEIS
Trigger: ACTGATCTCTGAGGACCACCAGCTGGCCAGGGTCTG...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCTTTGACTCTCAGGACTaGAGGCATCCTCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCFDSQD*RHPQQP
Trigger: GGGCTGCTGAGGATGCCTCCAGTCCTGAGAGTCAAA...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGAAAGCTGCAATTCCCTaGAGAACTTCTCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: PMWTALDVLGTPWRWWQEKAAIP*RTSLVL
Trigger: AAGGACAAGAGAAGTTCTCCAGGGAATTGCAGCTTT...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGGGTGGTGGTGGTTGTaGGTGGAGTGGGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSGWWWL*VEWGGW
Trigger: CCAGCCTCCCCACTCCACCCACAACCACCACCACCC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAGCAGTCAAGCCCAGCTaGGTCATTGAAGGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEAVKPS*VIEGGA
Trigger: AGCGCCCCCTTCAATGACCCAGCTGGGCTTGACTGC...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CTTGTGCTGGCCCCAGTTTGGGTGAGATCTGCTCCCTaGCAGAGAGAACGTGGCAGAACAGGGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVLAPVWVRSAP*QRERGRTGNRR
Trigger: CCTCCTGTTCCCTGTTCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp GGTAAGAGACATGAGAGACGTGGCTGGTCAGCAGGGTaGGGTCACGAAGGGTCTAGCGGACACTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKRHERRGWSAG*GHEGSSGHFRV
Trigger: CACCCTGAAGTGTCCGCTAGACCCTTCGTGACCCAACCCTGCTGACCAGCCACGTCTCTCATGTCTCTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCCATTCCTCTTGTAGATaGGCTCCTGGCGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCHSSCR*APGGSS
Trigger: GCTACTTCCGCCAGGAGCTCATCTACAAGAGGAATG...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGTCAATCAGTTCTCGTaGACCCTTTCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKVNQFS*TLSSPG
Trigger: CCCAGGGGAGGAAAGGGTTCACGAGAACTGATTGAC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCGCACACTCTCCTGCTaGAGCAGGGTTTGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPRTLSC*SRVWFR
Trigger: CCTGAACCAAACCCTGCTGCAGCAGGAGAGTGTGCG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGTCCACCTCCAGCCCTaGCTGCCGCAGGATGTCGAT +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSVHLQP*LPQDVD
Trigger: ATCGACATCCTGCGGCAGGCAGGGCTGGAGGTGGAC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATAGGGTCCCGGGGTTATaGTGGGCACCCGGGGCACGC +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHRVPGL*WAPGAR
Trigger: GCGTGCCCCGGGTGCCCAGCATAACCCCGGGACCCT...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGGCCCTGGCGGGTCCTaGTGTTGTAGCTGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRGPGGS*CCSWSE
Trigger: TTCAGACCAGCTACAACAGCAGGACCCGCCAGGGCC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGCCTCCCCACTTGGCTaGTGTGCCTCCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAASPLG*CASPGA
Trigger: GGCACCTGGGGAGGCACAGCAGCCAAGTGGGGAGGC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGGTGAGGATAGCCGATaGTCCCTGGAAAGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKGEDSR*SLERAK
Trigger: CTTGGCTCTTTCCAGGGAGCATCGGCTATCCTCACC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGCAGCAGCTGGCAGCTaGCCAGGGCCGAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLAAAGS*PGPRWC
Trigger: ACACCATCTCGGCCCTGGCCAGCTGCCAGCTGCTGC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAATCTGGGGCCACATCCTaGCTGGGGGATCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEESGATS*LGDLQQ
Trigger: TTGCTGAAGATCCCCCAGCCAGGATGTGGCCCCAGA...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGTGGGCTCCAAGATCTaGCAAGTCAGGACATGCGAC +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASVGSKI*QVRTCD
Trigger: GTCGCATGTCCTGACTTGCCAGATCTTGGAGCCCAC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCTTGCTGCTTATGGAATaGTGGTTCTCTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPALLLME*WFSGPG
Trigger: TCCTGGGCCAGAGAACCACCATTCCATAAGCAGCAA...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAAGCCCAGCTCCCACTTaGAGAAAGGGTGAGGATAGC +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASSPAPT*RKGEDS
Trigger: GCTATCCTCACCCTTTCTCCAAGTGGGAGCTGGGCT...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTaGGCCAGAGGGGTCAACATAAGCAGCCGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: HATHGTCSCQSP*ARGVNISSRPK
Trigger: TTTTGGCCGGCTGCTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp GAAAGCCAAGCACCTCATCTCCATGGAGGCCCAAGATaGTCCATGTCACCCCTGCCCTCCAGCCCTAGAACT +
Preference number: 4 (lower is better)
Translates to: ESQAPHLHGGPR*SMSPLPSSPRT
Trigger: AGTTCTAGGGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTGCTTGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CCCAGCCACTGGGGACCCAAGATGTCTGAGAGCCCTTaGTCCCTGGCAGCTCACCGGAAACATCTTAGACTT +
Preference number: 4 (lower is better)
Translates to: PSHWGPKMSESP*SLAAHRKHLRL
Trigger: AAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCCCAGTGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCTGCCCGCGATGGCATTaGATAGGTAGTCAGCATAGA +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCCPRWH*IGSQHR
Trigger: TCTATGCTGACTACCTATTCAATGCCATCGCGGGCA...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCCCCCAGCGCTTTGGTTaGAAACACTTACCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCPQRFG*KHLPRA
Trigger: AGCTCTTGGTAAGTGTTTTCAACCAAAGCGCTGGGG...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCTTTGGGATCCACTGTaGCAATGGCCCTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGELWDPL*QWPWAG
Trigger: TCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAGGGGGTCACAGAGGGTaGTTCGGGGACAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSGGHRG*FGDSGS
Trigger: GCTGCCGCTGTCCCCGAAGCACCCTCTGTGACCCCC...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGATCCTGGGCCGTCACCTaGTCGTGTGGCGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGSWAVT*SCGGRV
Trigger: CACCCTCCCGCCACACGAGCAGGTGACGGCCCAGGA...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCAATCCCATGTGGACTaGCCTCGACGTGTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEQSHVD*PRRVGH
Trigger: GTGCCCAACACGTCGAGGGCAGTCCACATGGGATTG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCAAGGCTAAGCCTGCCTaGCTGCCCCTCCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLKAKPA*LPLLLR
Trigger: CCTCAGCAGGAGGGGCAGGCAGGCAGGCTTAGCCTT...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCAGTTTGGGTGAGATCTaGTCCCTTGCAGAGAGAACG +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQISLGEI*SLAERT
Trigger: CGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACT...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAGCGACACATGGCACATaGAGTTGCCAGAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEATHGT*SCQSPL
Trigger: CAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGC...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGGAGTCCCTGTCACCTaGCTCCCCACTTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLGVPVT*LPTWLL
Trigger: CAGCAGCCAAGTGGGGAGGCAGGTGACAGGGACTCC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGAGCTGCCCAGAACTTaGCGTCTCAGAAGGGAGATA +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASELPRT*RLRREI
Trigger: TATCTCCCTTCTGAGACGGCAAGTTCTGGGCAGCTC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTCTCACGCCATACTCTaGCCCAAACAGAGAGGAATC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQISHAIL*PKQRGI
Trigger: GATTCCTCTCTGTTTGGGGCAGAGTATGGCGTGAGA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAAGCCAGTGGGCACACTaGCCCTGCTCAAACACCTCT +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRSQWAH*PCSNTS
Trigger: AGAGGTGTTTGAGCAGGGGCAGTGTGCCCACTGGCT...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCTTTCCCACCTCCACATaGTTTCAATCCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIFPTST*FQSHGS
Trigger: GCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAAA...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACCAGGAGGCGCGCAGTaGGACAAGTGCGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSPGGAQ*DKCGGR
Trigger: CCTTCCGCCGCACTTGTCCCACTGCGCGCCTCCTGG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGACACGGGTGCTAGCCTaGAAGGCTGCCTTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGETRVLA*KAALEL
Trigger: CAACTCCAAGGCAGCCTTCCAGGCTAGCACCCGTGT...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGCTGGGATGTGTCGTaGTTGAAGATGACTGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVASWDVS*LKMTAL
Trigger: CAGCGCAGTCATCTTCAACCACGACACATCCCAGCT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTTGGGTGCCGAGCTGCTaGCGGGCCCTGGCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSWVPSC*RALAGP
Trigger: AGGACCCGCCAGGGCCCGCCAGCAGCTCGGCACCCA...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGGACATGCGACACATaGCACATGCAGTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVARTCDT*HMQLPE
Trigger: CTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCACTGGAGGAAGACCTaGGGACATGGCCATTCCAAC +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPHWRKT*GHGHSN
Trigger: GTTGGAATGGCCATGTCCCCAGGTCTTCCTCCAGTG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGACATGAGAGACGTGGCTaGTCAGCAGGGTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRHERRG*SAGLGH
Trigger: GTGACCCAACCCTGCTGACCAGCCACGTCTCTCATG...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCAGCACCTCATCTCCATaGAGGCCCAAGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCSTSSP*RPKIVH
Trigger: ATGGACAATCTTGGGCCTCCATGGAGATGAGGTGCT...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTAGAGCCCTTTGTCCCTaGCAGCTCACCGGAAACATC +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPRALCP*QLTGNI
Trigger: GATGTTTCCGGTGAGCTGCCAGGGACAAAGGGCTCT...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp TGGCAAGTCAGGACATGCGACACATGGCACATGCAGTaGCCAGAGCCCTTTGGCCAGAGGGGTCAACATAAG +
Preference number: 4 (lower is better)
Translates to: WQVRTCDTWHMQ*PEPFGQRGQHK
Trigger: CTTATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAACTCCTCCAGCTGGCTaGGGCTGTCGGGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSTPPAG*GCRGAG
Trigger: TCCTGCTCCCCGACAGCCTCAGCCAGCTGGAGGAGT...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAGGACCCAGAGGTCATTaGACTGCCGCGGCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSGPRGH*TAAAAG
Trigger: ACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCC...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCCCAGGAGGCTTCGGTaGTCCAAGAGCAAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLPRRLR*SKSKPV
Trigger: GACTGGCTTGCTCTTGGATCACCGAAGCCTCCTGGG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGTTTTGCATCACACTaGTCTGGGGCCACATCCTGG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPCFASH*SGATSW
Trigger: CCAGGATGTGGCCCCAGATCAGTGTGATGCAAAACA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCTCTCTACACATCTGTTaGGCACCACCTTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCSLHIC*APPLCQ
Trigger: CTGACACAAAGGTGGTGCTCAACAGATGTGTAGAGA...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCTTGAAGGGGGCGCTGTaGGGGGTGGTGGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPLKGAL*GVVVVV
Trigger: CACAACCACCACCACCCCTCACAGCGCCCCCTTCAA...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGGCGCAGTGGGACAAGTaGGGCGGAAGGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKAQWDK*GGRRGR
Trigger: CCTGCCGCGCCTTCCGCCGCACTTGTCCCACTGCGC...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAACCGAGAACCCGGGGTaGGCAAGGGTCCCGGGGTTA +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGTENPG*ARVPGL
Trigger: TAACCCCGGGACCCTTGCGCACCCCGGGTTCTCGGT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACAGCATAGAGCCCCTTaGCCCGCTGAGCGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSQHRAP*PAERAS
Trigger: TGACGCCCGCTCAGCGGGGCAAGGGGCTCTATGCTG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGGCAAGTCAGGACATaGGACACATGGCACATGCAG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPWQVRT*DTWHMQ
Trigger: CTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGGGGCACACGGTCAGGTaGCTGGACTGTTTACCCAAA +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEGHTVR*LDCLPK
Trigger: TTTGGGTAAACAGTCCAGGCACCTGACCGTGTGCCC...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCACCAGCCCCAATTCTaGTGTCTGCCACACAGGATG +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEHQPQF*CLPHRM
Trigger: CATCCTGTGTGGCAGACAGCAGAATTGGGGCTGGTG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGGGGCCTTGGAGGCATaGTACTCTGTCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSGALEA*YSVTFP
Trigger: GGGAAAGGTGACAGAGTAGCATGCCTCCAAGGCCCC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGAGGGCAAACAGCACCTaGGAGAAGTTGAGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGERANST*EKLSPL
Trigger: CAACGGGCTCAACTTCTCCCAGGTGCTGTTTGCCCT...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCGGGGAGCCCCCAGTTaGGCACGGAGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHRGAPS*ARSFLW
Trigger: CCAGAGGAAACTCCGTGCCCAACTGGGGGCTCCCCG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCAACTGCCGCGGCCGCTaGTGTGTGCTCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPNCRGR*CVLCLL
Trigger: CAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCCTGTGTCATTTCTCTaGCTTCTCCACTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPPVSFL*LLHLGW
Trigger: CCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAGTGTTGGGCACCCCCTaGAGGTGGTGGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGVLGTP*RWWQEQ
Trigger: CTGCTCCTGCCACCACCTCCAGGGGGTGCCCAACAC...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCCCACGCTGCAGGCTTTaGAAAAATGGCAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAPRCRL*KNGSSH
Trigger: ATGAGAGCTGCCATTTTTCCAAAGCCTGCAGCGTGG...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGATGGGAGGGGGCTTCCTaGAGGAAGTGCTATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRWEGAS*RKCYLC
Trigger: ACACAGATAGCACTTCCTCCAGGAAGCCCCCTCCCA...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGCTGGGCTGCAGGCCTaGGTTCCAGTTCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAAGLQA*VPVHSS
Trigger: GGAGGAGTGAACTGGAACCCAGGCCTGCAGCCCAGC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp ACAGAGAGGTCTGGATTTATGTCCTCACTCTCCCACTaGCCGTGTGACCTTGGGCTACCCACCTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: TERSGFMSSLSH*PCDLGLPTWFS
Trigger: AGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATCCAGACCTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp TTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTaGGGTGAGATCTGCTCCCTTGCAGAGAGAACGTGG +
Preference number: 4 (lower is better)
Translates to: FLGGVKACAGPS*GEICSLAERTW
Trigger: CCACGTTCTCTCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CAGCACAAGGTTCCATGCTTCCTAGATCCCAGATCTTaGACTCTCAGGACTGGAGGCATCCTCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QHKVPCFLDPRS*TLRTGGILSSP
Trigger: AGGGCTGCTGAGGATGCCTCCAGTCCTGAGAGTCAAAGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CCAGGAGGGACCCTCAATGTCATCTACACCAGGCCCTaGGCAAGATGTCAACTCTCCTACCACTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PGGTLNVIYTRP*ARCQLSYHFFS
Trigger: GCTGAAGAAGTGGTAGGAGAGTTGACATCTTGCCAAGGGCCTGGTGTAGATGACATTGAGGGTCCCTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp CTTTGTCCCTGGCAGCTCACCGGAAACATCTTAGACTaGGATCCCGTTCAAAGCCCACTTTCCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LCPWQLTGNILD*DPVQSPLSPQQ
Trigger: CTGCTGTGGGGAAAGTGGGCTTTGAACGGGATCCAAGTCTAAGATGTTTCCGGTGAGCTGCCAGGGACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCCTCAACCACCACCTTaGGGAGCCGAGGGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPPQPPP*GAEGLK
Trigger: CTTTAGCCCCTCGGCTCCTCAAGGTGGTGGTTGAGG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAGTGGGACAAGGGGCCTaGGCACCTAGGCTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSVGQGA*APRLVQ
Trigger: CTGGACAAGCCTAGGTGCTCAGGCCCCTTGTCCCAC...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGGGACCCAAGATGTCTaGGAGCCCTTTGTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAGTQDV*EPFVPG
Trigger: GCCAGGGACAAAGGGCTCTCAGACATCTTGGGTCCC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCGGGGACAAGCTCTGTaGGGCTCAAGAATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPRGQAL*GSRMGQ
Trigger: CTGCCCCATTCTTGAGCCTCACAGAGCTTGTCCCCG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGCCTGTGTTGCACAGTaGATCAACTCGGGGACAAGC +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSACVAQ*INSGTS
Trigger: GCTTGTCCCCGAGTTGATTCACTGTGCAACACAGGC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGACACTGCTCCTCCACCTaGTCCACAGCCCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGHCSST*STAPVV
Trigger: GACCACAGGGGCTGTGGAGCAGGTGGAGGAGCAGTG...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGTCAAAGGTGTGGGTTaGTGCTTATGGAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKVKGVG*CLWNGG
Trigger: ACCACCATTCCATAAGCAGCAACCCACACCTTTGAC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCTTCATCTTTCCTGCCTaGCTCACAGTCAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAFIFPA*LTVKQK
Trigger: TTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAA...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACCCAATTCTGCTGTCTaGCACACAGGATGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEPNSAV*HTGCHQ
Trigger: TTGATGGCATCCTGTGTGGCAGACAGCAGAATTGGG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGGTGGAACTAAGGTCTaGCTCTCTCCTTCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKGGTKV*LSPSFL
Trigger: CAGAAAAGAAGGAGAGAGGCAGACCTTAGTTCCACC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGATCCTGCTGTTGTAGCTaGTCTGAAAGCTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRSCCCS*SESWKG
Trigger: CCCCTTCCAGCTTTCAGACCAGCTACAACAGCAGGA...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTCAACGTTCACACCTCTaGCTCCCAAATCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPQRSHL*LPNPAS
Trigger: TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTG...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGAACAGAGAGGTCTaGATTTATGTCCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIQNREV*IYVLTL
Trigger: GAGAGTGAGGACATAAATCCAGACCTCTCTGTTCTG...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCAGGAAAGCTTCTCGTaGGCTCCAAGATCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEQESFS*APRSGK
Trigger: CTTGCCAGATCTTGGAGCCCACGAGAAGCTTTCCTG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAATCCCCAGACAGCTTTaGCTTGGTGGAAATTATGCC +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASIPRQL*LGGNYA
Trigger: GGCATAATTTCCACCAAGCCAAAGCTGTCTGGGGAT...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGCAGCCTGTGGGTCCTaGGAAGAAAGCCAAGCACCT +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLAACGS*EESQAP
Trigger: AGGTGCTTGGCTTTCTTCCCAGGACCCACAGGCTGC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp GATTTATGTCCTCACTCTCCCACTTGCCGTGTGACCTaGGGCTACCCACCTGGTTCTCTCTGGATCTCAGTT +
Preference number: 4 (lower is better)
Translates to: DLCPHSPTCRVT*GYPPGSLWISV
Trigger: AACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGACATAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGCCGCAGGATGTCGATaGCTGTGTTGTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLAAGCR*LCCSPE
Trigger: TTCTGGGGAACAACACAGTCATCGACATCCTGCGGC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCATGGAGTTGTCCGGGATaGAGTCCCAGACGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSWSCPG*SPRRGC
Trigger: ACACCCGCGTCTGGGACTTCATCCCGGACAACTCCA...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGGACTCTGTAATTACTaGGGCACCTGCCCCATAGGG +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLGLCNY*GTCPIG
Trigger: CCCTATGGGGCAGGTGCCTCAGTAATTACAGAGTCC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAGCCCGCACACTCTCCTaGTGCAGCAGGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGARTLS*CSRVWF
Trigger: GAACCAAACCCTGCTGCAGCAGGAGAGTGTGCGGGC...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTCGCTGGTGTGTGCTCTaGCTCTTGTGCCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSARWCVL*LLCHFL
Trigger: GAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCG...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTTTCCCAGGCCGCGGGTaGATCCAGCAGAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSFPGRG*IQQRGG
Trigger: TCCTCCCCTCTGCTGGATGCACCCGCGGCCTGGGAA...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCATGAGAGAATTCAAGTaGCCCAGACATGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAMREFK*PRHADS
Trigger: GGAATCTGCATGTCTGGGGCACTTGAATTCTCTCAT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAAAGGTGTGGGTTGCTaGTTATGGAATGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAKGVGC*LWNGGS
Trigger: AGAACCACCATTCCATAAGCAGCAACCCACACCTTT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAACCTTTCATCTTTCCTaGCTGCCTCACAGTCAAACA +
Preference number: 4 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASTFHLS*LPHSQT
Trigger: TGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGT...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTATGGCCATTCCAACATaGCCCAGAGAGCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSMAIPT*PREPFI
Trigger: GATGAAGGGCTCTCTGGGGCATGTTGGAATGGCCAT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGTCTGCCACACAGGATaGCATCAAAGCTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRVCHTG*HQSCNS
Trigger: GGAATTGCAGCTTTGATGGCATCCTGTGTGGCAGAC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGTATTCTAGAGATGACTaGACATCACGCTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEYSRDD*TSRWPG
Trigger: GCCTGGCCAGCGTGATGTGCAGTCATCTCTAGAATA...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCTAGCCAATCCCATGTaGACTGCCCTCGACGTGTTG +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLLANPM*TALDVL
Trigger: CAACACGTCGAGGGCAGTCCACATGGGATTGGCTAG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTCAGCAGAGGGGAGGATaGCCAACGTTCACACCTCTG +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAQQRGG*PTFTPL
Trigger: CAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTG...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCCCACCTGGTTCTCTCTaGATCTCAGTTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAPPGSL*ISVYSF
Trigger: AAATGAATAAACTGAGATCCAGAGAGAACCAGGTGG...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTTGCATCACACTGATCTaGGGCCACATCCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSACITLI*GHILAG
Trigger: CCCAGCCAGGATGTGGCCCCAGATCAGTGTGATGCA...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTGGCCAAAAGGTTTCTTaGTGGAGTGAAAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPGQKVS*WSESLC
Trigger: GCACAAGCTTTCACTCCACCAAGAAACCTTTTGGCC...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AATTCAGCTGCCTGCCAAGATGCCCGTGGGACTCCTGACCATCCCATGAGCTGCGTGCCTCAAGTCTTTTaGGTCATAAGTCAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: NSAACQDARGTPDHPMSCVPQVF*VISQQV
Trigger: AACTTGCTGACTTATGACCCAAAAGACTTGAGGCAC...GCAGCTCATGGGATGGTCAGGAGTCCCACGGGCATCTTGGCAGGCAGCTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGATCGTGTCAAAGGTGTaGGTTGCTGCTTATGGAATG +
Preference number: 4 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKIVSKV*VAAYGM
Trigger: CATTCCATAAGCAGCAACCCACACCTTTGACACGAT...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTTCCCATGGCAGCCTGTaGGTCCTGGGAAGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSASHGSL*VLGRKP
Trigger: TGGCTTTCTTCCCAGGACCCACAGGCTGCCATGGGA...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTCCCGTAGAAGCGCCATaGCCCTCTTCCCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSPVEAP*PSSPCA
Trigger: AGCGCATGGGGAAGAGGGTCATGGCGCTTCTACGGG...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGACACAGTCAGCTTTCGTaGGAGGTAGAGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGHSQLS*EVEDPG
Trigger: CCCTGGGTCCTCTACCTCTCACGAAAGCTGACTGTG...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACCCAGACGGGCCTCTTaGGCTCCCAGTTGCCCGCGA +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLPRRAS*APSCPR
Trigger: TCGCGGGCAACTGGGAGCGCAAGAGGCCCGTCTGGG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCCCCAGAAAGTGACCTaGTCCGAAGGCAAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLPQKVT*SEGKEA
Trigger: TGCTTCTTTGCCTTCGGAGCAGGTCACTTTCTGGGG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGATTGTGCCACTTCCTCTaGCGGCCAAACTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGLCHFL*RPNSSS
Trigger: GCTGGAGGAGTTTGGCCGGCAGAGGAAGTGGCACAA...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGGCGGCCGCTGGTGTGTaGTCTGCCTCTTGTGCCACT +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKAAAGV*SASCAT
Trigger: AGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGC...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATAGCTGCCATCAAGCCTaGCAGGGAAACCCACGAAGC +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHSCHQA*QGNPRS
Trigger: GCTTCGTGGGTTTCCCTGGCAGGCTTGATGGCAGCT...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCAATCTAGCATTGCACTaGTTGTCCCATCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: HLISMEAQDCPCHPCPPANLALH*LSHLDN
Trigger: ATTATCAAGATGGGACAAGCAGTGCAATGCTAGATT...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGGACCACATTGGCTCTTaGTCTCCTGTAGGTACATGT +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEDHIGS*SPVGTC
Trigger: ACATGTACCTACAGGAGAGCAAGAGCCAATGTGGTC...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTCTGTCTTCATCTGGCTaGTGGTGCATCAGACCCACC +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSALSSSG*WCIRPT
Trigger: GGTGGGTCTGATGCACCAGCAGCCAGATGAAGACAG...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCAGCACAAGGTTCCATaGTTCCTAGATCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEQHKVP*FLDPRS
Trigger: AGATCTGGGATCTAGGAAGCATGGAACCTTGTGCTG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATTGTCCATGTCACCCCTaGCCTCCAGCCCTAGAACTG +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHCPCHP*PPALEL
Trigger: CAGTTCTAGGGCTGGAGGGCAGGGGTGACATGGACA...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAGTGTCTCCTCTCTGTaGGCCTTATTATTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEESVSSL*ALLFLL
Trigger: TAGGAGGAATAATAAGGCCCACAGAGAGGAGACACT...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGACCGGCTGTGCAGCCTTaGAGAAGTGTCTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGPAVQP*RSVSSL
Trigger: CAGAGAGGAGACACTTCTCCAAGGCTGCACAGCCGG...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCCAAGCTGGGCAAGATaGCACTGGGGCCAATTAGCT +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPPSWAR*HWGQLA
Trigger: AGCTAATTGGCCCCAGTGCCATCTTGCCCAGCTTGG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAAAACCAACTCCAGCCTaGATTGAGGTCAAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEKPTPA*IEVKFS
Trigger: ACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTT...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCGTTCATTTCAGACCCTaGCCAGCTGGTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPVHFRP*PAGGPQ
Trigger: CTGAGGACCACCAGCTGGCCAGGGTCTGAAATGAAC...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGAAAGCACAAAGGAATaGGAGGGGGCTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAESTKE*EGASWR
Trigger: CCTCCAGGAAGCCCCCTCCCATTCCTTTGTGCTTTC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGGCCCACCCCAGCCACTaGGGACCCAAGATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKAHPSH*GPKMSE
Trigger: CTCAGACATCTTGGGTCCCCAGTGGCTGGGGTGGGC...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
3UTR CAA 72 bp ACCCACCTGGTTCTCTCTGGATCTCAGTTTATTCATTaGTTCTGTGGGGTGGGGACTGCTTTCCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: THLVLSGSQFIH*FCGVGTAFLST
Trigger: GGTGCTGAGGAAAGCAGTCCCCACCCCACAGAACAAATGAATAAACTGAGATCCAGAGAGAACCAGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCTATTATCCATCAAGTaGAGGGTCCTTTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGELLSIK*RVLSAV
Trigger: GACAGCAGAAAGGACCCTTCACTTGATGGATAATAG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGCATAAGTCAGCAAGTTaGGTTCATTTCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGEHKSAS*VHFRPW
Trigger: CCAGGGTCTGAAATGAACTCAACTTGCTGACTTATG...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGATTATCTCACAGTCACTaGAAAACTATCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTCPREPFITQSAFVRGRLSHSH*KTITSP
Trigger: GGGGCTGGTGATAGTTTTTCAGTGACTGTGAGATAA...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGCAGAGGTCATTGAACTaGCGCGGCCGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKQRSLN*RGRWCV
Trigger: CACACACCAGCGGCCGCGGCAGTTCAATGACCTCTG...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCAGTGTGCAAAGTGCTTaGCACGCTGCAGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPSVQSA*HAAGFG
Trigger: TCCAAAGCCTGCAGCGTGGCAAGCACTTTGCACACT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCATGGCACATGCAGTTaGCAGAGCCCTTTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHHGTCS*QSPLAR
Trigger: TCTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAACCTTCTTGGCTCAGTaGCTGGCACAGATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGTFLAQ*LAQIWA
Trigger: TGCCCAGATCTGTGCCAGGCACTGAGCCAAGAAGGT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCGAAAAGTCTAAGAAGTaGACACAAATTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIEKSKK*TQISQS
Trigger: GCTCTGAGAAATTTGTGTGCACTTCTTAGACTTTTC...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTCTTGGGCTACCCACCTaGTTCTCTCTGGATCTCAGT +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSALGLPT*FSLDLS
Trigger: ACTGAGATCCAGAGAGAACCAGGTGGGTAGCCCAAG...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCATGGGCAAGATGGCACTaGGGCCAATTAGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSWARWH*GQLAAI
Trigger: GATGGCAGCTAATTGGCCCCAGTGCCATCTTGCCCA...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCACACGGTCAGGTGCCTaGACTGTTTACCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLTRSGA*TVYPNA
Trigger: AGCATTTGGGTAAACAGTCCAGGCACCTGACCGTGT...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAACAATGGCCCTGGGCTaGAGATTAGGCAAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSTMALG*RLGKWD
Trigger: GTCCCACTTGCCTAATCTCCAGCCCAGGGCCATTGT...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACCCAAGCTGGATTCATaGCACCAGAACAGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSPKLDS*HQNREV
Trigger: GACCTCTCTGTTCTGGTGTCATGAATCCAGCTTGGG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGTGGCCCCAGTTTGGGTaGGATCTGCTCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKWPQFG*DLLPCR
Trigger: TCTGCAAGGGAGCAGATCTCACCCAAACTGGGGCCA...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCTTGGCAACAGATGTCTaGCCACATTGGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPLATDV*PHWLLL
Trigger: GAGCAAGAGCCAATGTGGTCAGACATCTGTTGCCAA...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGGCTAGCCTGGAAGGCTaGCTTGGAGTTGTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKASLEG*LGVVRD
Trigger: ATCCCGGACAACTCCAAGGCAGCCTTCCAGGCTAGC...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAGTGAAGGGTCCTTTCTaGTGTCAGGTTCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGVKGPF*CQVPGL
Trigger: GAGTCCTGGAACCTGACAGCAGAAAGGACCCTTCAC...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTTGTAAAGAATTCAGCTaGCTGCCAAGATGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSACKEFS*LPRCPW
Trigger: CCACGGGCATCTTGGCAGGCAGCTGAATTCTTTACA...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGAGACATGCAGATTCCTaGATATGTGCCTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AKRFLGGVKACAGPSLGERHADS*ICASSL
Trigger: AAGACTTGAGGCACATATGCAGGAATCTGCATGTCT...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCATTTGTTCTGTGGGGTaGGGACTGCTTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPICSVG*GLLSSA
Trigger: TGCTGAGGAAAGCAGTCCCCACCCCACAGAACAAAT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCGGAATGGTGGTTCTCTaGCCCAGGATGAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPGMVVL*PRMREF
Trigger: GAATTCTCTCATCCTGGGCCAGAGAACCACCATTCC...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACACGTCCATCAGGGCTaGGCTGTAAAGAATTCAGCT +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSHVHQG*AVKNSA
Trigger: AGCTGAATTCTTTACAGCTCAGCCCTGATGGACGTG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACACCTTTGTGTCAGATaGGGGTACAAAAACAAATTT +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEHLCVR*GYKNKF
Trigger: AAATTTGTTTTTGTACCCTCATCTGACACAAAGGTG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTAGATTCCTGCATATGTaGCTCAAGTCTTTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSRFLHM*LKSFGS
Trigger: TGACCCAAAAGACTTGAGGCACATATGCAGGAATCT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACCCACCCCAGCGCTTTaGTTGAAAACACTTACCAAG +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSPTPAL*LKTLTK
Trigger: CTTGGTAAGTGTTTTCAACCAAAGCGCTGGGGTGGG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTATTCAGGCCTCCCAGGTaGGAGTTAGCCCACCTGGGT +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLFRPPR*ELAHLG
Trigger: ACCCAGGTGGGCTAACTCCCACCTGGGAGGCCTGAA...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAACACAAAGAACGTTTCTaGAAGAAATGTCAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEHKERF*KKCQLV
Trigger: CACTAACTGACATTTCTTCCAGAAACGTTCTTTGTG...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTCATCAGACCCACCACTaGAGGAAGACCTGGGGACAT +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSHQTHH*RKTWGH
Trigger: ATGTCCCCAGGTCTTCCTCCAGTGGTGGGTCTGATG...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTAGCTGGTCAGCAGGGTTaGGTCACGAAGGGTCTAGCG +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLAGQQG*VTKGLA
Trigger: CGCTAGACCCTTCGTGACCCAACCCTGCTGACCAGC...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAATTCCTGAACCTTACTaGTTTAGACAGCCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGIPEPY*FRQPAG
Trigger: CCCCGCTGGCTGTCTAAACCAGTAAGGTTCAGGAAT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTTCTTCATTTGACAGATaGGGAAGTGAAGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSASSFDR*GSEGSE
Trigger: CTCTGAGCCTTCACTTCCTCATCTGTCAAATGAAGA...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTGTGGTTGAAGATGACTaGGCTGAGGTCTCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSVVEDD*AEVSAV
Trigger: AACTGCGGAGACCTCAGCGCAGTCATCTTCAACCAC...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGAAGAATTCAGCTGCCTaGCAAGATGCCCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKKNSAA*QDARGT
Trigger: AGTCCCACGGGCATCTTGGCAGGCAGCTGAATTCTT...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACTTCTCCCTCCACTGTaGATGACAGGGCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLLLPPL*MTGLSL
Trigger: CAGGGAGAGCCCTGTCATCCACAGTGGAGGGAGAAG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCAGACAGCTTTGGCTTaGTGGAAATTATGCCACTGG +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHQTALA*WKLCHW
Trigger: CCAGTGGCATAATTTCCACCAAGCCAAAGCTGTCTG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGATATTCATTTGTTCTGTaGGGTGGGGACTGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGYSFVL*GGDCFP
Trigger: AGGAAAGCAGTCCCCACCCCACAGAACAAATGAATA...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATGAGATCAGTGAACTTTaGCAACAGATGTCTGACCAC +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHEISEL*QQMSDH
Trigger: GTGGTCAGACATCTGTTGCCAAAGTTCACTGATCTC...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATGATCACTTTACCTGCTaGGTCTCAGACCTTTCATCT +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHDHFTC*VSDLSS
Trigger: AGATGAAAGGTCTGAGACCCAGCAGGTAAAGTGATC...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTACTATTAACATCATGTaGGGCCTAAGCCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSTINIM*GLSPCL
Trigger: GAGACAGGGGCTTAGGCCTCACATGATGTTAATAGT...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGAGGCAGGAATTGTTTTaGATCACACTGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKRQELF*ITLIWG
Trigger: GCCCCAGATCAGTGTGATGCAAAACAATTCCTGCCT...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGGCCTGGCATTGCATGTaGTCAGTAATTACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKAWHCM*SVITSC
Trigger: GCAGCTTGTAATTACTGAGCACATGCAATGCCAGGC...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCAGGCTTTGGAAAAATaGCAGCTCTCATTACTATTA +
Preference number: 4 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLQALEK*QLSLLL
Trigger: TAATAGTAATGAGAGCTGCCATTTTTCCAAAGCCTG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGAAGTGCTATCTGTGTTaGTCCTCAATGGATGAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKKCYLC*SSMDEQ
Trigger: CTGCTCATCCATTGAGGATCAACACAGATAGCACTT...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCAAAAAACAAATTTACATaGCCCCTGCCATTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSKNKFT*PLPLSC
Trigger: GCAGCTTAATGGCAGGGGTCATGTAAATTTGTTTTT...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGCAAAAGGTTTCTTGGTaGAGTGAAAGCTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKQKVSW*SESLCW
Trigger: CCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTG...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGCTGGGCCAAGGAGAGTaGTTAGATTCAGCTCTAATA +
Preference number: 4 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKLGQGE*LDSALI
Trigger: TATTAGAGCTGAATCTAACCACTCTCCTTGGCCCAG...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCTTTCTTTAAACACTTaGATTAGGGTAAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHLSLNT*IRVRES
Trigger: ACTCTCCCTTACCCTAATTCAAGTGTTTAAAGAAAG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR TCA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTAATGTTCATAGAACTTaGTCATTGCAGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSNVHRT*SLQSQE
Trigger: CTCCTGGCTCTGCAATGATCAAGTTCTATGAACATT...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR GCA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCAGCATGAAGAAAATATaGTTAGGGTCTTTCAATGCA +
Preference number: 4 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPSMKKI*LGSFNA
Trigger: TGCATTGAAAGACCCTAAGCATATTTTCTTCATGCT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTAATAAAGTTGGGCAGCTaGGATGTGTCGTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLIKLGS*DVSWLK
Trigger: CTTCAACCACGACACATCCCAGCTGCCCAACTTTAT...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CCA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTATCCTTTAACCCAAGCTaGATTCATGACACCAGAACA +
Preference number: 4 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLSFNPS*IHDTRT
Trigger: TGTTCTGGTGTCATGAATCCAGCTTGGGTTAAAGGA...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp GGCACGGAGTTTCCTCTGGAGCACGGGGCTCCAGCCGCAGGATGCTaGGCGCCCTCTGGGGCGTGGCTGACTGTCCCTGTCGGACCTGGG +
Preference number: 5 (lower is better)
Translates to: GTEFPLEHGAPAAGC*APSGAWLTVPVGPG
Trigger: CCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGCCCCGTGCTCCAGAGGAAACTCCGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp TCCTCTGGAGCACGGGGCTCCAGCCGCAGGATGCTGGGCGCCCTCTaGGGCGTGGCTGACTGTCCCTGTCGGACCTGGGGGTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSGARGSSRRMLGAL*GVADCPCRTWGFLW
Trigger: CCAGAGAAACCCCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGCCCCGTGCTCCAGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp AGCAGACAGCGATGGTGGTGGCGATGGCGGGGAGAAGGCCCAGGGTaGGTGCCGAGCTGCTGGCGGGCCCTGGCGGGTCCTGCTGTTGTA +
Preference number: 5 (lower is better)
Translates to: SRQRWWWRWRGEGPG*VPSCWRALAGPAVV
Trigger: TACAACAGCAGGACCCGCCAGGGCCCGCCAGCAGCTCGGCACCCACCCTGGGCCTTCTCCCCGCCATCGCCACCACCATCGCTGTCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 90 bp TTGGGCACGGAGTTTCCTCTGGAGCACGGGGCTCCAGCCGCAGGATaGTGGGCGCCCTCTGGGGCGTGGCTGACTGTCCCTGTCGGACCT +
Preference number: 5 (lower is better)
Translates to: LGTEFPLEHGAPAAG*WAPSGAWLTVPVGP
Trigger: AGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGCCCCGTGCTCCAGAGGAAACTCCGTGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 90 bp TGCCGCGGCCGCTGGTGTGTGCTCTGCCTCTTGTGCCACTTCCTCTaGCGGCCAAACTCCTCCAGCTGGCTGAGGCTGTCGGGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CRGRWCVLCLLCHFL*RPNSSSWLRLSGSR
Trigger: CCTGCTCCCCGACAGCCTCAGCCAGCTGGAGGAGTTTGGCCGGCAGAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp GTCAGGAGGGCCCAAGGCTATGCAGCAGGAAGCAGACAGCGATGGTaGTGGCGATGGCGGGGAGAAGGCCCAGGGTGGGTGCCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VRRAQGYAAGSRQRW*WRWRGEGPGWVPSC
Trigger: GCAGCTCGGCACCCACCCTGGGCCTTCTCCCCGCCATCGCCACCACCATCGCTGTCTGCTTCCTGCTGCATAGCCTTGGGCCCTCCTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp GAGGTCAGGAGGGCCCAAGGCTATGCAGCAGGAAGCAGACAGCGATaGTGGTGGCGATGGCGGGGAGAAGGCCCAGGGTGGGTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: EVRRAQGYAAGSRQR*WWRWRGEGPGWVPS
Trigger: GCTCGGCACCCACCCTGGGCCTTCTCCCCGCCATCGCCACCACCATCGCTGTCTGCTTCCTGCTGCATAGCCTTGGGCCCTCCTGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp CTCTGGGGCGTGGCTGACTGTCCCTGTCGGACCTGGGGGTTTCTCTaGGGCCGGGCTCCGTCTGTTGGAAGAGGGAGACCCTCTAGGGCT +
Preference number: 5 (lower is better)
Translates to: LWGVADCPCRTWGFL*GRAPSVGRGRPSRA
Trigger: AGCCCTAGAGGGTCTCCCTCTTCCAACAGACGGAGCCCGGCCCCAGAGAAACCCCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS TCA 90 bp GTGGTGAGGCGGTGGTGCTGTCCTCGATGCGGACCCAGAGGTCATTaGACTGCCGCGGCCGCTGGTGTGTGCTCTGCCTCTTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: VVRRWCCPRCGPRGH*TAAAAGVCSASCAT
Trigger: AGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCACCACCGCCTCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 90 bp GAGGCGGTGGTGCTGTCCTCGATGCGGACCCAGAGGTCATTGAACTaGCGCGGCCGCTGGTGTGTGCTCTGCCTCTTGTGCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: EAVVLSSMRTQRSLN*RGRWCVLCLLCHFL
Trigger: GAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCACCACCGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGTGGTGGAGTGAAAGCTaGTGCTGGCCCCAGTTTGGG +
Preference number: 5 (lower is better)
Translates to: PMWTALDVLGTPWRWWQEWWSES*CWPQFG
Trigger: CCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCA...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp CTGTCCTCGATGCGGACCCAGAGGTCATTGAACTGCCGCGGCCGCTaGTGTGTGCTCTGCCTCTTGTGCCACTTCCTCTGCCGGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LSSMRTQRSLNCRGR*CVLCLLCHFLCRPN
Trigger: GTTTGGCCGGCAGAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp GGCAGGAGCAGTTGGGTGTGGCCGAAGACCCCTGTGTCATTTCTCTaGCTTCTCCACTTGGGGTGGCCGAGGTCAGGAGGGCCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GRSSWVWPKTPVSFL*LLHLGWPRSGGPKA
Trigger: AGCCTTGGGCCCTCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCACACCCAACTGCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp GGGTGTGGCCGAAGACCCCTGTGTCATTTCTCTGGCTTCTCCACTTaGGGTGGCCGAGGTCAGGAGGGCCCAAGGCTATGCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: GCGRRPLCHFSGFST*GGRGQEGPRLCSRK
Trigger: CTTCCTGCTGCATAGCCTTGGGCCCTCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCATCCTCAGCAGCCCTTaGCAGCTCCCTGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAILSSP*QLPGSL
Trigger: CAGGCTGCCAGGGAGCTGCAAAGGGCTGCTGAGGAT...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 90 bp TGGCCGAAGACCCCTGTGTCATTTCTCTGGCTTCTCCACTTGGGGTaGCCGAGGTCAGGAGGGCCCAAGGCTATGCAGCAGGAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: WPKTPVSFLWLLHLG*PRSGGPKAMQQEAD
Trigger: GTCTGCTTCCTGCTGCATAGCCTTGGGCCCTCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGGGATGAAGGGGGCCTaGGAGGCATGCTACTCTGTC +
Preference number: 5 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAGMKGA*EACYSV
Trigger: GACAGAGTAGCATGCCTCCAAGGCCCCCTTCATCCC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS TCA 90 bp CGGGTGTGTGGTCCACCTCCAGCCCTGCCTGCCGCAGGATGTCGATaGCTGTGTTGTTCCCCAGAAAGTGACCTGGGATGTGTCGTGGTT +
Preference number: 5 (lower is better)
Translates to: RVCGPPPALPAAGCR*LCCSPESDLGCVVV
Trigger: AACCACGACACATCCCAGGTCACTTTCTGGGGAACAACACAGTCATCGACATCCTGCGGCAGGCAGGGCTGGAGGTGGACCACACACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435576.2
CDS TCA 90 bp CGGGTGTGTGGTCCACCTCCAGCCCTGCCTGCCGCAGGATGTCGATaGCTGTGTTGTTCCCCAGAAAGTGACCTGCTCCGAAGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: RVCGPPPALPAAGCR*LCCSPESDLLRRQR
Trigger: TCTTTGCCTTCGGAGCAGGTCACTTTCTGGGGAACAACACAGTCATCGACATCCTGCGGCAGGCAGGGCTGGAGGTGGACCACACACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCATGTGGACTGCCCTCGACGTGTTGGGCACCCCCTGGAGGTGGTGGCAGGAGCGACGTAATCTAGCATaGCACTGCTTGTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: PMWTALDVLGTPWRWWQERRNLA*HCLSHL
Trigger: AAGATGGGACAAGCAGTGCAATGCTAGATTACGTCG...CTCCTGCCACCACCTCCAGGGGGTGCCCAACACGTCGAGGGCAGTCCACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTGCCGGGCTCCGTCTGTaGGAAGAGGGAGACCCTCTA +
Preference number: 5 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPAGLRL*EEGDPL
Trigger: TAGAGGGTCTCCCTCTTCCAACAGACGGAGCCCGGC...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGGGCGGGAGGGTGGTGTaGATAAAGTTGGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKGGRVV*IKLGSW
Trigger: CCAGCTGCCCAACTTTATCAACACCACCCTCCCGCC...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGTGAGATCTGCTCCCTaGCAGAGAGAACGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAVRSAP*QRERGR
Trigger: TCTGCCACGTTCTCTCTGCAAGGGAGCAGATCTCAC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAAGGGCTAGAGCCTCCTTaGGCTGAATCAGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEGLEPP*AESAPA
Trigger: GGCAGGGGCTGATTCAGCCAAAGGAGGCTCTAGCCC...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAGAGAAGTTGAGCCCGTaGTTGAGGGGATGGCACTGC +
Preference number: 5 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASEKLSP*LRGWHC
Trigger: GCAGTGCCATCCCCTCAACAACGGGCTCAACTTCTC...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACCTCATCTCCATGGAGGCCCAAGATTGTCCATGTCACCCCTGCCCTCCAGCCGTGGTGTTGATAAAGTaGGGCAGCTGGGATGTGTCG +
Preference number: 5 (lower is better)
Translates to: HLISMEAQDCPCHPCPPAVVLIK*GSWDVS
Trigger: CGACACATCCCAGCTGCCCAACTTTATCAACACCAC...GGCTGGAGGGCAGGGGTGACATGGACAATCTTGGGCCTCCATGGAGATGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCGCCACGCTGCAGGCTTaGGAAAAATGGCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: VHPAEGRMANVHTSGSQIATLQA*EKWQLS
Trigger: TGAGAGCTGCCATTTTTCCAAAGCCTGCAGCGTGGC...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGTGCTGGCCCCAGTTaGGGTGAGATCTGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPCAGPS*GEICSL
Trigger: AAGGGAGCAGATCTCACCCAAACTGGGGCCAGCACA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCCACGAAGCTATAAAGTaGGGGTGCACTGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAHEAIK*GCTGLG
Trigger: TCCCAGCCCAGTGCACCCCAACTTTATAGCTTCGTG...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp TTCCCACCTCCACATGCTTTCAATCCCATGGCAGCCTGTGGGTCCTGGGAAGAATGGGATGTGTCGTGGTaGAAGATGACTGCGCTGAGG +
Preference number: 5 (lower is better)
Translates to: FPPPHAFNPMAACGSWEEWDVSW*KMTALR
Trigger: CCTCAGCGCAGTCATCTTCAACCACGACACATCCCA...TTCTTCCCAGGACCCACAGGCTGCCATGGGATTGAAAGCATGTGGAGGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCGGACCCAGAGGTCATaGAACTGCCGCGGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHRTQRS*NCRGRW
Trigger: CCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GTGCATCCAGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCTCTCAGCCTTTGATTaGGCAGGAAAGCTTCTCGTG +
Preference number: 5 (lower is better)
Translates to: VHPAEGRMANVHTSGSQILSAFD*AGKLLV
Trigger: CACGAGAAGCTTTCCTGCCAAATCAAAGGCTGAGAG...GATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCTGGATGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACACCTGCCTCCCCACTaGGCTGCTGTGCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSHLPPH*AAVPPQ
Trigger: CTGGGGAGGCACAGCAGCCAAGTGGGGAGGCAGGTG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCACTAGATCCCAGATCTTaGACTCTCAGGACTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASLDPRS*TLRTGG
Trigger: GCCTCCAGTCCTGAGAGTCAAAGATCTGGGATCTAG...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCCTGAGCACCTAGGCTaGTCCAGGTCTAGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLPEHLG*SRSSRG
Trigger: GCCTCGGCTAGACCTGGACAAGCCTAGGTGCTCAGG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 90 bp TGTTCCCCAGAAAGTGACCTGGGATGTGTCGTGGTTGAAGATGACTaGGCTGAGGTCTCCGCAGTTGTAGTGCTTGATGAGGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: CSPESDLGCVVVEDD*AEVSAVVVLDEVLR
Trigger: ACGGAGGACCTCATCAAGCACTACAACTGCGGAGACCTCAGCGCAGTCATCTTCAACCACGACACATCCCAGGTCACTTTCTGGGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435576.2
CDS-3UTR CAA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCGCAAAGAAGCAGATCTaGTCCTCGTTCTCCCGTAGA +
Preference number: 5 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAAKKQI*SSFSRR
Trigger: TCTACGGGAGAACGAGGACAAGATCTGCTTCTTTGC...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCCCCGGCTGTGCAGCCTaGGAGAAGTGTCTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLPGCAA*EKCLLS
Trigger: AGAGAGGAGACACTTCTCCAAGGCTGCACAGCCGGG...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 90 bp GTTGATAAAGTTGGGCAGCTGGGATGTGTCGTGGTTGAAGATGACTaGGCTGAGGTCTCCGCAGTTGTAGTGCTTGATGAGGTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: VDKVGQLGCVVVEDD*AEVSAVVVLDEVLR
Trigger: ACGGAGGACCTCATCAAGCACTACAACTGCGGAGACCTCAGCGCAGTCATCTTCAACCACGACACATCCCAGCTGCCCAACTTTATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCAGCACCTGGGAGAAGTaGAGCCCGTTGTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLSTWEK*SPLLRG
Trigger: TCCCCTCAACAACGGGCTCAACTTCTCCCAGGTGCT...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTGCCTGGAAGGCTGCCTaGGAGTTGTCCGGGATGAAG +
Preference number: 5 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAAWKAA*ELSGMK
Trigger: CTTCATCCCGGACAACTCCAAGGCAGCCTTCCAGGC...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATCTCTGGCTTCTCCACTaGGGGTGGCCGAGGTCAGGA +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHLWLLH*GWPRSG
Trigger: TCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGAG...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTGAGGCAGGAATTGTTTaGCATCACACTGATCTGGGG +
Preference number: 5 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPEAGIV*HHTDLG
Trigger: CCCCAGATCAGTGTGATGCAAAACAATTCCTGCCTC...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTAGTTGCCAGAGCCCTTaGGCCAGAGGGGTCAACATA +
Preference number: 5 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSSCQSP*ARGVNI
Trigger: TATGTTGACCCCTCTGGCCAAAGGGCTCTGGCAACT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCAGAGCCCTTGTCAAAGGTGTGGGTaGCTGCTTATGGAATGGTGG +
Preference number: 5 (lower is better)
Translates to: RSGKSGHATHGTCSCQSPCQRCG*LLMEWW
Trigger: CCACCATTCCATAAGCAGCAACCCACACCTTTGACA...AGGGCTCTGGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATGGCTGGTCAGCAGGGTaGGGTCACGAAGGGTCTAGC +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHGWSAG*GHEGSS
Trigger: GCTAGACCCTTCGTGACCCAACCCTGCTGACCAGCC...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCTCCTCTTTGGGATCCACTGTGACAATGGCCCTGGGCTGGAGATTAGGCAAGCTCTCTACACATCTGTaGAGCACCACCTTTGTGTCA +
Preference number: 5 (lower is better)
Translates to: PSSLGSTVTMALGWRLGKLSTHL*STTFVS
Trigger: TGACACAAAGGTGGTGCTCAACAGATGTGTAGAGAG...CTTGCCTAATCTCCAGCCCAGGGCCATTGTCACAGTGGATCCCAAAGAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTGAGAGGGACAGGAACTaGCCCAAGGTCATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSERDRN*PKVIQQ
Trigger: TTGCTGGATGACCTTGGGCAAGTTCCTGTCCCTCTC...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCACTGCACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTATGTCTGAGAGCCCTTaGTCCCTGGCAGCTCACCGG +
Preference number: 5 (lower is better)
Translates to: ALHDPFDVQLLSLLYKSAMSESP*SLAAHR
Trigger: CCGGTGAGCTGCCAGGGACAAAGGGCTCTCAGACAT...AGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTGCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCAAACAGGAGGCAGGAATaGTTTTGCATCACACTGATC +
Preference number: 5 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASNRRQE*FCITLI
Trigger: GATCAGTGTGATGCAAAACAATTCCTGCCTCCTGTT...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCATACAGAGCCTGGCATaGCATGTGCTCAGTAATTAC +
Preference number: 5 (lower is better)
Translates to: GLQDLASQDMRHMAHAVAIQSLA*HVLSNY
Trigger: GTAATTACTGAGCACATGCAATGCCAGGCTCTGTAT...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGCAGAGGGGAGGATGGCCAACGTTCACACCTCTGGCTCCCAAATCCAGCTTCACTAGCATTGCACTGCTaGTCCCATCTTGATAATGAG +
Preference number: 5 (lower is better)
Translates to: SRGEDGQRSHLWLPNPASLALHC*SHLDNE
Trigger: CTCATTATCAAGATGGGACAAGCAGTGCAATGCTAG...TGAAGCTGGATTTGGGAGCCAGAGGTGTGAACGTTGGCCATCCTCCCCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GGGCTCCAAGATCTGGCAAGTCAGGACATGCGACACATGGCACATGCAGTTGCCTGTGCCTCAAGTCTTTaGGGTCATAAGTCAGCAAGT +
Preference number: 5 (lower is better)
Translates to: GLQDLASQDMRHMAHAVACASSL*GHKSAS
Trigger: ACTTGCTGACTTATGACCCAAAAGACTTGAGGCACA...GGCAACTGCATGTGCCATGTGTCGCATGTCCTGACTTGCCAGATCTTGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGGTGAGGCTGAGGACTCTGGTTCTTATCTCACAGTCACTGAAAAACTATCACATGGAGGCCCAAGATaGTCCATGTCACCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: QGEAEDSGSYLTVTEKLSHGGPR*SMSPLP
Trigger: GGGCAGGGGTGACATGGACAATCTTGGGCCTCCATG...TGATAGTTTTTCAGTGACTGTGAGATAAGAACCAGAGTCCTCAGCCTCACCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGAACATGGCACATGCAGTaGCCAGAGCCCTTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGTWHMQ*PEPFGQ
Trigger: CTGGCCAAAGGGCTCTGGCAACTGCATGTGCCATGT...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCAACATGCCCCAGAGAGCCCTTCATCACACAGTCAGCTTTCGTGAGAGGTAGAGGAAACATCTTAGACTaGGATCCCGTTCAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PTCPREPFITQSAFVRGRGNILD*DPVQSP
Trigger: TGGGCTTTGAACGGGATCCAAGTCTAAGATGTTTCC...TCTACCTCTCACGAAAGCTGACTGTGTGATGAAGGGCTCTCTGGGGCATGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CAGGATGAGAGAATTCAAGTGCCCCAGACATGCAGATTCCTGCATATGTGCCTCGACTTTCCCTCCTCTTaGGGATCCACTGTGACAATG +
Preference number: 5 (lower is better)
Translates to: QDERIQVPQTCRFLHMCLDFPSS*GSTVTM
Trigger: CATTGTCACAGTGGATCCCAAAGAGGAGGGAAAGTC...GAGGCACATATGCAGGAATCTGCATGTCTGGGGCACTTGAATTCTCTCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CCCCTGCCATTAAGCTGCTCACAGTCCGAGAGGAGCAGATACACACTAGATAGTAATCTGAAGCCTGTGTaGCACAGTGAATCAACTCGG +
Preference number: 5 (lower is better)
Translates to: PLPLSCSQSERSRYTLDSNLKPV*HSESTR
Trigger: CCGAGTTGATTCACTGTGCAACACAGGCTTCAGATT...ACTATCTAGTGTGTATCTGCTCCTCTCGGACTGTGAGCAGCTTAATGGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GTCTCCTCTCTGTGGGCCTTATTATTCCTCCTACTGTTACTATTATCCATCAAGAAGTTGAGCCCGTTGTaGAGGGGATGGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: VSSLWALLFLLLLLLSIKKLSPL*RGWHCS
Trigger: GGAGCAGTGCCATCCCCTCAACAACGGGCTCAACTT...CTTGATGGATAATAGTAACAGTAGGAGGAATAATAAGGCCCACAGAGAGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCACCCCAGCGCTTTGGTaGAAAACACTTACCAAGAGC +
Preference number: 5 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPTPALW*KTLTKS
Trigger: GCTCTTGGTAAGTGTTTTCAACCAAAGCGCTGGGGT...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp AGACCTTTCATCTTTCCTGCCTGCCTCACAGTCAAACAGAAAAGTCTAAGAAGTTCCTCACTCTCCCACTaGCCGTGTGACCTTGGGCTA +
Preference number: 5 (lower is better)
Translates to: RPFIFPACLTVKQKSLRSSSLSH*PCDLGL
Trigger: TAGCCCAAGGTCACACGGCAAGTGGGAGAGTGAGGA...ACTTCTTAGACTTTTCTGTTTGACTGTGAGGCAGGCAGGAAAGATGAAAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp TTCTCAGAGCAACAGGAGCATTTTATGAGGCTGGGCACAAAGAACGTTTCTGGACCCACCTCTCAGCCTTaGATTTGGCAGGAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FSEQQEHFMRLGTKNVSGPTSQP*IWQESF
Trigger: GAAGCTTTCCTGCCAAATCAAAGGCTGAGAGGTGGG...TCCAGAAACGTTCTTTGTGCCCAGCCTCATAAAATGCTCCTGTTGCTCTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATATCTACACCAGGCCCTaGGCAAGATGTCAACTCTCC +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHIYTRP*ARCQLS
Trigger: GGAGAGTTGACATCTTGCCAAGGGCCTGGTGTAGAT...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAAAGGTTTCTTGGTGGAGTGAAAGCTTGTGCTGGCCCCAGTTTGGGTGAGAATGCAAGGACAAATTaGTTCATAACCAGCACAAGG +
Preference number: 5 (lower is better)
Translates to: AKRFLGGVKACAGPSLGENARTN*FITSTR
Trigger: CCTTGTGCTGGTTATGAACAAATTTGTCCTTGCATT...CTCACCCAAACTGGGGCCAGCACAAGCTTTCACTCCACCAAGAAACCTTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp ACACATCTGTTGAGCACCACCTTTGTGTCAGATGAGGGTACAAAAACAAATTTACTGCTGCAGCAGGGTTaGGTTCAGGGCAAACAGCAC +
Preference number: 5 (lower is better)
Translates to: THLLSTTFVSDEGTKTNLLLQQG*VQGKQH
Trigger: GTGCTGTTTGCCCTGAACCAAACCCTGCTGCAGCAG...TAAATTTGTTTTTGTACCCTCATCTGACACAAAGGTGGTGCTCAACAGATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATACTGCTTGTCCCATCTaGATAATGAGTTCCTCTGGG +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHTACPI*IMSSSG
Trigger: CCCAGAGGAACTCATTATCAAGATGGGACAAGCAGT...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp CACGATCCGTTTGATGTCCAACTTCTGAGCCTGCTTTATAAGTCAGCTAAGCCCCCTGGAGAACTTCTCTaGTCCTTCACAGCATTTTCA +
Preference number: 5 (lower is better)
Translates to: HDPFDVQLLSLLYKSAKPPGELL*SFTAFS
Trigger: TGAAAATGCTGTGAAGGACAAGAGAAGTTCTCCAGG...GGGCTTAGCTGACTTATAAAGCAGGCTCAGAAGTTGGACATCAAACGGATCGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS-3UTR CAA 90 bp GCCAAGGATAAACCAACTCCAGCCTGGATTGAGGTCAAGTTCAGTTTAGAGCATAATCAAGGTCTTCATTaGACAGATGAGGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AKDKPTPAWIEVKFSLEHNQGLH*TDEEVK
Trigger: CTTCACTTCCTCATCTGTCAAATGAAGACCTTGATT...ATGCTCTAAACTGAACTTGACCTCAATCCAGGCTGGAGTTGGTTTATCCTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp GTCCCAGGGGTGCGCGGCGCTCCAGGAGGCGCGCAGTaGGACAAGTGCGGCGGAAGGCGCGGCAGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: VPGVRGAPGGAQ*DKCGGRRGRGG
Trigger: CCCACCCCTGCCGCGCCTTCCGCCGCACTTGTCCCACTGCGCGCCTCCTGGAGCGCCGCGCACCCCTGGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp GCACGGGGCTCCAGCCGCAGGATGCTGGGCGCCCTCTaGGGCGTGGCTGACTGTCCCTGTCGGACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: ARGSSRRMLGAL*GVADCPCRTWG
Trigger: CCCCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGCCCCGTGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp GGGGCAGGGCTGTGTATGGCCTGCCCGGCGGGTGTGTaGTCCACCTCCAGCCCTGCCTGCCGCAGGATGTCG +
Preference number: 6 (lower is better)
Translates to: GAGLCMACPAGV*STSSPACRRMS
Trigger: CGACATCCTGCGGCAGGCAGGGCTGGAGGTGGACCACACACCCGCCGGGCAGGCCATACACAGCCCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435576.2
ENST00000606738.3
CDS TCA 72 bp CAGCCGCAGGATGCTGGGCGCCCTCTGGGGCGTGGCTaGCTGTCCCTGTCGGACCTGGGGGTTTCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: QPQDAGRPLGRG*LSLSDLGVSLG
Trigger: CCCCAGAGAAACCCCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp GCTCCAGCCGCAGGATGCTGGGCGCCCTCTGGGGCGTaGCTGACTGTCCCTGTCGGACCTGGGGGTTTCTCT +
Preference number: 6 (lower is better)
Translates to: APAAGCWAPSGA*LTVPVGPGGFS
Trigger: AGAGAAACCCCCAGGTCCGACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp TTTCCTCTGGAGCACGGGGCTCCAGCCGCAGGATGCTaGGCGCCCTCTGGGGCGTGGCTGACTGTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: FPLEHGAPAAGC*APSGAWLTVPV
Trigger: GACAGGGACAGTCAGCCACGCCCCAGAGGGCGCCCAGCATCCTGCGGCTGGAGCCCCGTGCTCCAGAGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp GTGGCTGACTGTCCCTGTCGGACCTGGGGGTTTCTCTaGGGCCGGGCTCCGTCTGTTGGAAGAGGGAGACCC +
Preference number: 6 (lower is better)
Translates to: VADCPCRTWGFL*GRAPSVGRGRP
Trigger: GGGTCTCCCTCTTCCAACAGACGGAGCCCGGCCCCAGAGAAACCCCCAGGTCCGACAGGGACAGTCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp AGGGCCCAAGGCTATGCAGCAGGAAGCAGACAGCGATaGTGGTGGCGATGGCGGGGAGAAGGCCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: RAQGYAAGSRQR*WWRWRGEGPGW
Trigger: CCACCCTGGGCCTTCTCCCCGCCATCGCCACCACCATCGCTGTCTGCTTCCTGCTGCATAGCCTTGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CAA 72 bp GCGGTGGTGCTGTCCTCGATGCGGACCCAGAGGTCATaGAACTGCCGCGGCCGCTGGTGTGTGCTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: AVVLSSMRTQRS*NCRGRWCVLCL
Trigger: GAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCACCACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CAA 90 bp GGTGGTGAGGCGGTGGTGCTGTCCTCGATGCGGACCCAGAGGTCATaGAACTGCCGCGGCCGCTGGTGTGTGCTCTGCCTCTTGTGCCAC +
Preference number: 6 (lower is better)
Translates to: GGEAVVLSSMRTQRS*NCRGRWCVLCLLCH
Trigger: GTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCACCACCGCCTCACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS TCA 72 bp CGGTGGTGCTGTCCTCGATGCGGACCCAGAGGTCATTaGACTGCCGCGGCCGCTGGTGTGTGCTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: RWCCPRCGPRGH*TAAAAGVCSAS
Trigger: AGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCACCACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 72 bp CGCTGGTGTGTGCTCTGCCTCTTGTGCCACTTCCTCTaGCGGCCAAACTCCTCCAGCTGGCTGAGGCTGTCG +
Preference number: 6 (lower is better)
Translates to: RWCVLCLLCHFL*RPNSSSWLRLS
Trigger: CGACAGCCTCAGCCAGCTGGAGGAGTTTGGCCGGCAGAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 72 bp GTGCTGTCCTCGATGCGGACCCAGAGGTCATTGAACTaGCGCGGCCGCTGGTGTGTGCTCTGCCTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: VLSSMRTQRSLN*RGRWCVLCLLC
Trigger: GCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCATCGAGGACAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp ATGCGGACCCAGAGGTCATTGAACTGCCGCGGCCGCTaGTGTGTGCTCTGCCTCTTGTGCCACTTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: MRTQRSLNCRGR*CVLCLLCHFLC
Trigger: GCAGAGGAAGTGGCACAAGAGGCAGAGCACACACCAGCGGCCGCGGCAGTTCAATGACCTCTGGGTCCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS TCA 72 bp GGTCCACCTCCAGCCCTGCCTGCCGCAGGATGTCGATaGCTGTGTTGTTCCCCAGAAAGTGACCTGCTCCGA +
Preference number: 6 (lower is better)
Translates to: GPPPALPAAGCR*LCCSPESDLLR
Trigger: TCGGAGCAGGTCACTTTCTGGGGAACAACACAGTCATCGACATCCTGCGGCAGGCAGGGCTGGAGGTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CCA 72 bp AGTTGGGTGTGGCCGAAGACCCCTGTGTCATTTCTCTaGCTTCTCCACTTGGGGTGGCCGAGGTCAGGAGGG +
Preference number: 6 (lower is better)
Translates to: SWVWPKTPVSFL*LLHLGWPRSGG
Trigger: CCCTCCTGACCTCGGCCACCCCAAGTGGAGAAGCCAGAGAAATGACACAGGGGTCTTCGGCCACACCCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS CAA 72 bp TGGGCCGTCACCTGCTCGTGTGGCGGGAGGGTGGTGTaGATAAAGTTGGGCAGCTGGGATGTGTCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: WAVTCSCGGRVV*IKLGSWDVSWL
Trigger: CAACCACGACACATCCCAGCTGCCCAACTTTATCAACACCACCCTCCCGCCACACGAGCAGGTGACGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS TCA 72 bp GGTCCACCTCCAGCCCTGCCTGCCGCAGGATGTCGATaGCTGTGTTGTTCCCCAGAAAGTGACCTGGGATGT +
Preference number: 6 (lower is better)
Translates to: GPPPALPAAGCR*LCCSPESDLGC
Trigger: ACATCCCAGGTCACTTTCTGGGGAACAACACAGTCATCGACATCCTGCGGCAGGCAGGGCTGGAGGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435576.2
CDS GCA 72 bp GTTGGGCAGCTGGGATGTGTCGTGGTTGAAGATGACTaGGCTGAGGTCTCCGCAGTTGTAGTGCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: VGQLGCVVVEDD*AEVSAVVVLDE
Trigger: CTCATCAAGCACTACAACTGCGGAGACCTCAGCGCAGTCATCTTCAACCACGACACATCCCAGCTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606738.3
CDS GCA 72 bp GAAAGTGACCTGGGATGTGTCGTGGTTGAAGATGACTaGGCTGAGGTCTCCGCAGTTGTAGTGCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: ESDLGCVVVEDD*AEVSAVVVLDE
Trigger: CTCATCAAGCACTACAACTGCGGAGACCTCAGCGCAGTCATCTTCAACCACGACACATCCCAGGTCACTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435576.2