RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRABD2A (Homo sapiens)

Ensembl gene IDs: ENSG00000186854

Ensembl transcript IDs: ENST00000335459.9, ENST00000409133.1, ENST00000409520.7, ENST00000436322.1, ENST00000460991.1, ENST00000474298.5, ENST00000479944.5, ENST00000489999.1, ENST00000495990.5, ENST00000496500.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATCAACACTaGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACA +
Preference number: 1 (lower is better)
Translates to: WITQSHIPWKEKNQH*AAFSRAVSSGLGPT
Trigger: TGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR CCA 90 bp CACACAACTCACTATGTTACAAAACTGTACACCTGCCCCCAAAGTTaGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATCAACAC +
Preference number: 1 (lower is better)
Translates to: HTTHYVTKLYTCPQS*ITQSHIPWKEKNQH
Trigger: GTGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACATAGTGAGTTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR-3UTR TCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTGCTTTGGAGGAACTTTaGACCCATTCTGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACALEEL*THSVPS
Trigger: GGAGGGGACAGAATGGGTTCAAAGTTCCTCCAAAGC...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR CAA 90 bp AAGAATCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATaGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGC +
Preference number: 2 (lower is better)
Translates to: KNQHWAAFSRAVSSG*GPTRLDQNVEYRNG
Trigger: GCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGATTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR-3UTR CCA 90 bp TCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGTGTGGAGTACAGGAATaGCCATTCTTCAAGTCCGAG +
Preference number: 2 (lower is better)
Translates to: STLGRFFKSSLFWIGPNKCGVQE*PFFKSE
Trigger: CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACA...CTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR CAA 90 bp ACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTaGGAAAGAGAAGAATCAACACTGGGCCGCTTTTTCAAGAGCAGT +
Preference number: 2 (lower is better)
Translates to: TVHLPPKLDNPKSHS*EREESTLGRFFKSS
Trigger: ACTGCTCTTGAAAAAGCGGCCCAGTGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR-3UTR CCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTATTTCAGGGAACTATTaGACATGTCAAATAGTGATG +
Preference number: 2 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACISGNY*TCQIVM
Trigger: CATCACTATTTGACATGTCCAATAGTTCCCTGAAAT...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR-3UTR TCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGCTGAGTCAGGTCAAATaGAGACAAGCTTGGGAATGG +
Preference number: 2 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKLSQVK*RQAWEW
Trigger: CCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAG...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR CAA 90 bp TCACACAACTCACTATGTTACAAAACTGTACACCTGCCCCCAAAGTaGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATCAACA +
Preference number: 2 (lower is better)
Translates to: SHNSLCYKTVHLPPK*DNPKSHSLEREEST
Trigger: TGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACATAGTGAGTTGTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR-3UTR TCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAACACAGAGCAAGCTCTaGGTCAGGTCAAATGAAGAC +
Preference number: 2 (lower is better)
Translates to: AAPCKLQLILLFPATMMLTQSKL*VRSNED
Trigger: GTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR-3UTR CCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTTTAAGGATGGAGCTTTaGAGGAACTTTGAACCCATT +
Preference number: 2 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRALRMEL*RNFEPI
Trigger: AATGGGTTCAAAGTTCCTCCAAAGCTCCATCCTTAA...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR CAA 90 bp AGGTCAAATGAAGACAAGCTTGGGAATGGAAATTTCAGGGAACTATaGGACATGTCAAATAGTGATGATTCTTTAAGGATGGAGCTTTGG +
Preference number: 2 (lower is better)
Translates to: RSNEDKLGNGNFREL*DMSNSDDSLRMELW
Trigger: CCAAAGCTCCATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCCATTCCCAAGCTTGTCTTCATTTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR-3UTR CCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTAGACAAGCTTGGGAATaGAAATTTCAGGGAACTATT +
Preference number: 2 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRARQAWE*KFQGTI
Trigger: AATAGTTCCCTGAAATTTCCATTCCCAAGCTTGTCT...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR CCA 72 bp TCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTaGATTGGGCCCAACAAGGCTAGACCAGAATGTGGA +
Preference number: 3 (lower is better)
Translates to: STLGRFFKSSLF*IGPNKARPECG
Trigger: TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR TCA 72 bp ACCCTAAGAATAGGGCTATTCACACAGAGCAAGCTCTaGGTCAGGTCAAATGAAGACAAGCTTGGGAATGGA +
Preference number: 3 (lower is better)
Translates to: TLRIGLFTQSKL*VRSNEDKLGNG
Trigger: TCCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGTGAATAGCCCTATTCTTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR TCA 72 bp CTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTaGCTCTCTAGGAATATTTTAGAGCTTTTCTATACC +
Preference number: 3 (lower is better)
Translates to: LSWACAQLFSCM*LSRNILELFYT
Trigger: GGTATAGAAAAGCTCTAAAATATTCCTAGAGAGTCACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR-3UTR CAA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAAGCTTTGGAGGAACTTaGAACCCATTCTGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: AAPCKLQLILLFPATMMLSFGGT*NPFCPL
Trigger: GAGGGGACAGAATGGGTTCAAAGTTCCTCCAAAGCT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR GCA 72 bp TTTCACACAACTCACTATGTTACAAAACTGTACACCTaGCCCCAAAGTTGGATAACCCAAAGTCACATTCCT +
Preference number: 3 (lower is better)
Translates to: FHTTHYVTKLYT*PQSWITQSHIP
Trigger: AGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACATAGTGAGTTGTGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR CCA 72 bp ATGTCAAATAGTGATGATTCTTTAAGGATGGAGCTTTaGAGGAACTTTGAACCCATTCTGTCCCCTCCAGTA +
Preference number: 3 (lower is better)
Translates to: MSNSDDSLRMEL*RNFEPILSPPV
Trigger: TACTGGAGGGGACAGAATGGGTTCAAAGTTCCTCCAAAGCTCCATCCTTAAAGAATCATCACTATTTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR-3UTR CAA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGCAAATGAAGACAAGCTaGGGAATGGAAATTTCAGGG +
Preference number: 3 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKQMKTS*GMEISG
Trigger: CCCTGAAATTTCCATTCCCAAGCTTGTCTTCATTTG...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCGGAGTAGGGCAGAGGTaGCCGCCCGCCCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSGVGQR*PPALAS
Trigger: GCTAGCCAGGGCGGGCGGCCACCTCTGCCCTACTCC...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCATCGCGGCCTCCGCTGTaGCCGCCTCCGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GRFFKSSLFWIGPNKARPSRPPL*PPPLLP
Trigger: CGGAAGAAGCGGAGGCGGTCACAGCGGAGGCCGCGA...TGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGGGAGTAGGGCAGAGGTaGCCGCCCGCCCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWGVGQR*PPALAS
Trigger: GCTAGCCAGGGCGGGCGGCCACCTCTGCCCTACTCC...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335459.9
CDS-3UTR TCA 90 bp TTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCATCGCGGCCTCCGCTGTaGCCGCCTCCGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LGPTRLDQNVEYRNGHSSSRPPL*PPPLLP
Trigger: CGGAAGAAGCGGAGGCGGTCACAGCGGAGGCCGCGA...TGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp GTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGGACCCACAGATCGCTaGATTGCCGGAGTCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VEYRNGHSSSPRGQVLSLGPTDR*IAGVAA
Trigger: GGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCC...CAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCACTGCGTAGAGCCCCTTaGCGCGCTGGTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FWIGPNKARPECGVQEWPLRRAP*RAGLGS
Trigger: TGACCCCAGACCAGCGCGGCAAGGGGCTCTACGCAG...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGCCCAGACAGGCCTCTTaGGCTCCCAGTTTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQPRQAS*APSFRQ
Trigger: TTGCCGGAAACTGGGAGCGCAAGAGGCCTGTCTGGG...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGACCATCTGGCTGTGGTaGGAATGCCCACGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VEYRNGHSSSPRGQVLSLTIWLW*ECPRRG
Trigger: CCCTCGCCGTGGGCATTCCCACCACAGCCAGATGGT...CAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGACAGGCAGGCACTGCTaGCCACCATCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQTGRHC*PPSGCG
Trigger: ACCACAGCCAGATGGTGGCCAGCAGTGCCTGCCTGT...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp CCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTCGCTTTGTTGGGGCTTaGGCTCGCAGTTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PECGVQEWPFFKSEGSGSRFVGA*ARSWRC
Trigger: GCACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCG...AGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTACTCCAGGTGGCGCTTaGGGCGGCAGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: YRNGHSSSPRGQVLSLVLTPGGA*GGSRCP
Trigger: GGGACATCTACTGCCGCCTCAAGCGCCACCTGGAGT...AAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGACTCCAGGTGGCGCTTaGGGCGGCAGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWTPGGA*GGSRCP
Trigger: GGGACATCTACTGCCGCCTCAAGCGCCACCTGGAGT...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGACCCACAGATCGCTaGATTGCCGGAGTCGCGGCC +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNGPTDR*IAGVAA
Trigger: GGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCC...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp CCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGCTGCGTAGAGCCCCTTaGCGCGCTGGTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PTRLDQNVEYRNGHSSSPLRRAP*RAGLGS
Trigger: TGACCCCAGACCAGCGCGGCAAGGGGCTCTACGCAG...CGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTCTGCGTAGAGCCCCTTaGCGCGCTGGTCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACLRRAP*RAGLGS
Trigger: TGACCCCAGACCAGCGCGGCAAGGGGCTCTACGCAG...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGGGATACGGCTTCTGGTaGCGGTACTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQGYGFW*RYFQGR
Trigger: CCTACCCTGGAAGTACCGGCACCAGAAGCCGTATCC...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGGGAGGCAGCGTTGAGTaGCCTGAGGATACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQGGSVE*PEDTAS
Trigger: AGAAGCCGTATCCTCAGGGCACTCAACGCTGCCTCC...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGCACAGATCGCTGAATTaGCGGAGTCGCGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SRAVSSGLGPTRLDQNVEHRSLN*RSRGLR
Trigger: GCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTG...CTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCGAGGTTCTCGCCCTGTaGCAGCATCTGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSEVLAL*QHLTAG
Trigger: ACCAGCTGTCAGATGCTGCCACAGGGCGAGAACCTC...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp CTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACTGGGGAGCACATCTTaGAGGTTCTCGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGRFFKSSLFWIGPNKARLGSTS*RFSPCG
Trigger: GCCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAG...TCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTAGCCCCTTGCCGCGCTaGTCTGGGGTCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: YRNGHSSSPRGQVLSLVLSPLPR*SGVIHK
Trigger: CTTGTGGATGACCCCAGACCAGCGCGGCAAGGGGCT...AAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTGCCACCATCTGGCTGTaGTGGGAATGCCCACGGCGA +
Preference number: 4 (lower is better)
Translates to: GLGPTRLDQNVEYRNGHSATIWL*WECPRR
Trigger: TCGCCGTGGGCATTCCCACCACAGCCAGATGGTGGC...AGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTCGCTTTGTTGGGGCTTaGGCTCGCAGTTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACRFVGA*ARSWRC
Trigger: GCACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCG...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp TCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGGAGACAGGCAGGCACTaGTGGCCACCATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRAVSSGLGPTRLDQNVEETGRH*WPPSGC
Trigger: ACAGCCAGATGGTGGCCAGCAGTGCCTGCCTGTCTC...CTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGAGGGGATCTGAAGACTaGCTGCTCGCAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQRGSED*LLAGFP
Trigger: AGGAAAGCCTGCGAGCAGGCAGTCTTCAGATCCCCT...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR CCA 90 bp CTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGAGAGGTTCTCGCCCTGTaGCAGCATCTGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LGRFFKSSLFWIGPNKAREVLAL*QHLTAG
Trigger: ACCAGCTGTCAGATGCTGCCACAGGGCGAGAACCTC...TCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCACTGGGGAGCACATCTTaGAGGTTCTCGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FWIGPNKARPECGVQEWPLGSTS*RFSPCG
Trigger: GCCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAG...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGCTTGCCGCGCTGGTCTaGGGTCATCCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: STLGRFFKSSLFWIGPNKLAALV*GHPQGH
Trigger: ATGCCCTTGTGGATGACCCCAGACCAGCGCGGCAAG...CTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGTCTCTTCCCTTTGTGGATaGGTCGTCCAGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: NGHSSSPRGQVLSLVLPVSSLCG*VVQQGR
Trigger: ACGCCCCTGCTGGACGACCCATCCACAAAGGGAAGA...GACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATCTGTTCGGCCTCACTaGGCGTGTCGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: FWIGPNKARPECGVQEWPSVRPH*ACRHFQ
Trigger: CTGGAAGTGCCGACACGCCCAGTGAGGCCGAACAGA...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTACAGGCAGGCACTGCTaGCCACCATCTGGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YRNGHSSSPRGQVLSLVLTGRHC*PPSGCG
Trigger: ACCACAGCCAGATGGTGGCCAGCAGTGCCTGCCTGT...AAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGGCAGTGATGCGCTCCTaGGGTGGTAGCGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: SRAVSSGLGPTRLDQNVEAVMRS*GGSVAL
Trigger: TAATGCCACGCTACCACCTCAGGAGCGCATCACTGC...CTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp AATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGTCCAATCTCCTGAGCAGTaGTGCGCTCCTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: NGHSSSPRGQVLSLVLPVQSPEQ*CAPEVV
Trigger: TACCACCTCAGGAGCGCATCACTGCTCAGGAGATTG...GACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTCCCAGACAGGCCTCTTaGGCTCCCAGTTTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACPRQAS*APSFRQ
Trigger: TTGCCGGAAACTGGGAGCGCAAGAGGCCTGTCTGGG...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp ATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCGAGACAGGCAGGCACTaGTGGCCACCATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: IGPNKARPECGVQEWPFFETGRH*WPPSGC
Trigger: ACAGCCAGATGGTGGCCAGCAGTGCCTGCCTGTCTC...GAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTCTGGGGAGCACATCTTaGAGGTTCTCGCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACLGSTS*RFSPCG
Trigger: GCCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAG...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATCTTGCCGCGCTGGTCTaGGGTCATCCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNLAALV*GHPQGH
Trigger: ATGCCCTTGTGGATGACCCCAGACCAGCGCGGCAAG...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATTCTGTTCGGCCTCACTaGGCGTGTCGGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNSVRPH*ACRHFQ
Trigger: CTGGAAGTGCCGACACGCCCAGTGAGGCCGAACAGA...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGTCCAGGACAGGGACCTaGAGTTGCGGGACTATGTCA +
Preference number: 4 (lower is better)
Translates to: VEYRNGHSSSPRGQVLSLSRTGT*SCGTMS
Trigger: TGACATAGTCCCGCAACTCCAGGTCCCTGTCCTGGA...CAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAAGGGGTGTCTCTGTTTaGAAAGCCAGCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: RNGHSSSPRGQVLSLVLPRGVSV*KASTST
Trigger: GGTGCTGGTGCTGGCTTTCCAAACAGAGACACCCCT...TGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGATACGGCTTCTGGTaGCGGTACTTCCAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNGYGFW*RYFQGR
Trigger: CCTACCCTGGAAGTACCGGCACCAGAAGCCGTATCC...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCACAGGGACCTGGAGTTaGGGGACTATGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGLGPTRLDQNVEYRNGTGTWS*GTMSLS
Trigger: GGAGAGTGACATAGTCCCGCAACTCCAGGTCCCTGT...GCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp ACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCCGCAGGCTTTCCTGCTaGAGGAGGGTCTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TRMWSTGMAILQVRGVRFRRLSC*RRVWFK
Trigger: TTTGAACCAGACCCTCCTGCAGCAGGAAAGCCTGCG...GAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR GCA 90 bp AGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACGATCTGAAGACTGCCTaGTCGCAGGCTTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RAVSSGLGPTRLDQNVEYDLKTA*SQAFLL
Trigger: CAGCAGGAAAGCCTGCGAGCAGGCAGTCTTCAGATC...GTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTGGAGCAAAGATGGTaGACAGAGTGGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: FWIGPNKARPECGVQEWPLEQRW*TEWAVW
Trigger: CCACACGGCCCACTCTGTCCACCATCTTTGCTCCAA...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
3UTR CAA 72 bp CACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATaGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAC +
Preference number: 4 (lower is better)
Translates to: HWAAFSRAVSSG*GPTRLDQNVEY
Trigger: GTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp ACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATCGCTTTGTTGGGGCTTaGGCTCGCAGTTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: TCPQSWITQSHIPWKEKNRFVGA*ARSWRC
Trigger: GCACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCG...ATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTGCATCTGACAGCTGGTaGGAGCTGAGATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: YRNGHSSSPRGQVLSLVLASDSW*ELRWYR
Trigger: CCTATACCATCTCAGCTCTCACCAGCTGTCAGATGC...AAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGGAGGCAGCGTTGAGTaGCCTGAGGATACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FSRAVSSGLGPTRLDQNVGGSVE*PEDTAS
Trigger: AGAAGCCGTATCCTCAGGGCACTCAACGCTGCCTCC...CACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAACAGGGACCTGGAGTTaGGGGACTATGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: LGPTRLDQNVEYRNGHSSTGTWS*GTMSLS
Trigger: GGAGAGTGACATAGTCCCGCAACTCCAGGTCCCTGT...TGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp ATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAGTTCAGTGGAGATGTaGCTGTCCAGGACAGGGACC +
Preference number: 4 (lower is better)
Translates to: IGPNKARPECGVQEWPFFSSVEM*LSRTGT
Trigger: GGTCCCTGTCCTGGACAGGCACATCTCCACTGAACT...GAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATAGTTCAGTGGAGATGTaGCTGTCCAGGACAGGGACC +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNSSVEM*LSRTGT
Trigger: GGTCCCTGTCCTGGACAGGCACATCTCCACTGAACT...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTCGCAGGCTTTCCTGCTaGAGGAGGGTCTGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACRRLSC*RRVWFK
Trigger: TTTGAACCAGACCCTCCTGCAGCAGGAAAGCCTGCG...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGTTCAGCTCGCTTTGTTaGGGCTTGAGCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWFSSLC*GLSSQL
Trigger: CAACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAA...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTGGCAGTAGATGTCCCTaGGGAGCACATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GPTRLDQNVEYRNGHSSSGSRCP*GAHLGG
Trigger: ACCTCCAAGATGTGCTCCCCAGGGACATCTACTGCC...ACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp ACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATAGCCCCTTGCCGCGCTaGTCTGGGGTCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: TCPQSWITQSHIPWKEKNSPLPR*SGVIHK
Trigger: CTTGTGGATGACCCCAGACCAGCGCGGCAAGGGGCT...ATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCGTTCAACCCATTCAATaGATGGCACTGCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSVQPIQ*MALLFH
Trigger: GTGGAAGAGCAGTGCCATCCATTGAATGGGTTGAAC...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGTCTTCCCTTTGTGGATaGGTCGTCCAGCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSESSLCG*VVQQGR
Trigger: ACGCCCCTGCTGGACGACCCATCCACAAAGGGAAGA...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACTTACTCTTCCCTTTGTaGATGGGTCGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RAVSSGLGPTRLDQNVEYLLFPL*MGRPAG
Trigger: CCCTGCTGGACGACCCATCCACAAAGGGAAGAGTAA...GTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAACAGAGTGGGCCGTGTaGAGGTCTTTTTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRFFKSSLFWIGPNKARPTEWAV*RSFYSS
Trigger: GGAAGAGTAAAAAGACCTCCACACGGCCCACTCTGT...TGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTAGATGGTGGACAGAGTaGGCCGTGTGGAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GLGPTRLDQNVEYRNGHSRWWTE*AVWRSF
Trigger: AAAAGACCTCCACACGGCCCACTCTGTCCACCATCT...AGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCATTGGAGCAAAGATGGTaGACAGAGTGGGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LGPTRLDQNVEYRNGHSSLEQRW*TEWAVW
Trigger: CCACACGGCCCACTCTGTCCACCATCTTTGCTCCAA...TGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTATCCAGGACAGGGACCTaGAGTTGCGGGACTATGTCA +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVSRTGT*SCGTMS
Trigger: TGACATAGTCCCGCAACTCCAGGTCCCTGTCCTGGA...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp ACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAATACCATCTGGCTGTGGTaGGAATGCCCACGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TCPQSWITQSHIPWKEKNTIWLW*ECPRRG
Trigger: CCCTCGCCGTGGGCATTCCCACCACAGCCAGATGGT...ATTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGACCTGGGAGCTGTCATaGCTGAGGATGACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSETWELS*LRMTEL
Trigger: CAGCTCCGTCATCCTCAGCCATGACAGCTCCCAGGT...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR TCA 90 bp ACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGGCAGTGATGCGCTCCTaGGGTGGTAGCGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: TKLYTCPQSWITQSHIPWAVMRS*GGSVAL
Trigger: TAATGCCACGCTACCACCTCAGGAGCGCATCACTGC...CCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGCAATCTCCTGAGCAGTaGTGCGCTCCTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: FSRAVSSGLGPTRLDQNVQSPEQ*CAPEVV
Trigger: TACCACCTCAGGAGCGCATCACTGCTCAGGAGATTG...CACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp AGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACCTGTGTTGTTGCCCATaGAATGACCAGCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RAVSSGLGPTRLDQNVEYLCCCP*NDQLQR
Trigger: CCTTTGGAGCTGGTCATTTCATGGGCAACAACACAG...GTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp AGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCACAAAGTACACAATGCTaGTCTGCAGGAAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RNGHSSSPRGQVLSLVLPQSTQC*SAGKPP
Trigger: AGGAGGCTTTCCTGCAGAGCAGCATTGTGTACTTTG...TGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TGTTACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCCCCAGACAGGCCTCTTaGGCTCCCAGTTTCCGGCAA +
Preference number: 4 (lower is better)
Translates to: CYKTVHLPPKLDNPKSHSPRQAS*APSFRQ
Trigger: TTGCCGGAAACTGGGAGCGCAAGAGGCCTGTCTGGG...GGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGATTCAGCTCGCTTTGTTaGGGCTTGAGCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FKSSLFWIGPNKARPECGFSSLC*GLSSQL
Trigger: CAACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAA...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCGCCAAAGAAGTAAGATaGTGGGTCTCGCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSAKEVR*WVSLNG
Trigger: ACCATTAAGCGAGACCCACCATCTTACTTCTTTGGC...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGGCCAAAGAAGTAAGATaGTGGGTCTCGCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQAKEVR*WVSLNG
Trigger: ACCATTAAGCGAGACCCACCATCTTACTTCTTTGGC...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAAGAGGTTCTCGCCCTGTaGCAGCATCTGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLPPKLDNPKSHSLEREEEVLAL*QHLTAG
Trigger: ACCAGCTGTCAGATGCTGCCACAGGGCGAGAACCTC...TTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGTTCAACCCATTCAATaGATGGCACTGCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRFFKSSLFWIGPNKARPVQPIQ*MALLFH
Trigger: GTGGAAGAGCAGTGCCATCCATTGAATGGGTTGAAC...TGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTATTACTCTTCCCTTTGTaGATGGGTCGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVLLFPL*MGRPAG
Trigger: CCCTGCTGGACGACCCATCCACAAAGGGAAGAGTAA...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp ATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCCTTTTGGAGCAAAGATaGTGGACAGAGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IGPNKARPECGVQEWPFFLLEQR*WTEWAV
Trigger: CACGGCCCACTCTGTCCACCATCTTTGCTCCAAAAG...GAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACTTTTGGAGCAAAGATaGTGGACAGAGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVLLEQR*WTEWAV
Trigger: CACGGCCCACTCTGTCCACCATCTTTGCTCCAAAAG...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCAGGGTAGGGACTTTTaGAGCAAAGATGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: YRNGHSSSPRGQVLSLVLQGRDF*SKDGGQ
Trigger: CTGTCCACCATCTTTGCTCCAAAAGTCCCTACCCTG...AAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGCAGGGTAGGGACTTTTaGAGCAAAGATGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: STLGRFFKSSLFWIGPNKQGRDF*SKDGGQ
Trigger: CTGTCCACCATCTTTGCTCCAAAAGTCCCTACCCTG...CTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGAGGGGTGTCTCTGTTTaGAAAGCCAGCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSERGVSV*KASTST
Trigger: GGTGCTGGTGCTGGCTTTCCAAACAGAGACACCCCT...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCGTCAGGTTCTTAGCCTaGTGCTTCCAGTCGTTACAG +
Preference number: 4 (lower is better)
Translates to: SSGLGPTRLDQNVEYRNGVRFLA*CFQSLQ
Trigger: CTGTAACGACTGGAAGCACCAGGCTAAGAACCTGAC...GCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGTGTGGAGTACAGGAATaGCCATTCTTCAAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: VEYRNGHSSSPRGQVLSLCGVQE*PFFKSE
Trigger: CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACA...CAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTAAGAGCAGTCTCTTCTaGATTGGGCCCAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLGPTRLDQNVEYRNGHSKSSLF*IGPNKA
Trigger: AGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT...AGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCAAAGAGCAGTCTCTTCTaGATTGGGCCCAACAAGGCT +
Preference number: 4 (lower is better)
Translates to: FWIGPNKARPECGVQEWPKSSLF*IGPNKA
Trigger: AGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACTGCTGCAGGAGGGTCTaGTTCAAAGCAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: RAVSSGLGPTRLDQNVEYCCRRV*FKAKMT
Trigger: GGTCATCTTTGCTTTGAACCAGACCCTCCTGCAGCA...GTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR CCA 90 bp AATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGTCATAAAATTGGGAACCTaGGAGCTGTCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NGHSSSPRGQVLSLVLPVIKLGT*ELSWLR
Trigger: CCTCAGCCATGACAGCTCCCAGGTTCCCAATTTTAT...GACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR TCA 90 bp TTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGACAGCTGGTGAGAGCTaGGATGGTATAGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSRAVSSGLGPTRLDQNVTAGES*DGIGVC
Trigger: ACAGACCCCTATACCATCTCAGCTCTCACCAGCTGT...CACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TCACACAGAGCAAGCTCTGAGTCAGGTCAAATGAAGACAAGCTTGGGAATGGAACAATCTCCTGAGCAGTaGTGCGCTCCTGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SHRASSESGQMKTSLGMEQSPEQ*CAPEVV
Trigger: TACCACCTCAGGAGCGCATCACTGCTCAGGAGATTG...TTCCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp AGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATTCCACCTTTTCCACTaGCCCAGTCTGTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLFWIGPNKARPECGVQEFHLFH*PSLFPQ
Trigger: CTGAGGAAACAGACTGGGGCAGTGGAAAAGGTGGAA...TTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp CCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGTTCCACCTTTTCCACTaGCCCAGTCTGTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PTRLDQNVEYRNGHSSSPFHLFH*PSLFPQ
Trigger: CTGAGGAAACAGACTGGGGCAGTGGAAAAGGTGGAA...CGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp ATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAGGTTCTTAGCCTGGTaGTTCCAGTCGTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: IGPNKARPECGVQEWPFFRFLAW*FQSLQE
Trigger: CTCCTGTAACGACTGGAAGCACCAGGCTAAGAACCT...GAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAAGGTTCTTAGCCTGGTaGTTCCAGTCGTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: FKSSLFWIGPNKARPECGRFLAW*FQSLQE
Trigger: CTCCTGTAACGACTGGAAGCACCAGGCTAAGAACCT...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAAGGCAGTAGATGTCCCTaGGGAGCACATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HLPPKLDNPKSHSLEREEGSRCP*GAHLGG
Trigger: ACCTCCAAGATGTGCTCCCCAGGGACATCTACTGCC...TTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTAGCCCCTTGCCGCGCTaGTCTGGGGTCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRASPLPR*SGVIHK
Trigger: CTTGTGGATGACCCCAGACCAGCGCGGCAAGGGGCT...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTGTTCAACCCATTCAATaGATGGCACTGCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLGPTRLDQNVEYRNGHSVQPIQ*MALLFH
Trigger: GTGGAAGAGCAGTGCCATCCATTGAATGGGTTGAAC...AGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAACAGAGTGGGCCGTGTaGAGGTCTTTTTACTCTTCC +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVTEWAV*RSFYSS
Trigger: GGAAGAGTAAAAAGACCTCCACACGGCCCACTCTGT...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAGTCAGGTTCTTAGCCTaGTGCTTCCAGTCGTTACAG +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVVRFLA*CFQSLQ
Trigger: CTGTAACGACTGGAAGCACCAGGCTAAGAACCTGAC...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTGTGGAGTACAGGAATaGCCATTCTTCAAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: PECGVQEWPFFKSEGSGSCGVQE*PFFKSE
Trigger: CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACA...AGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp ACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGGCATCTGACAGCTGGTaGGAGCTGAGATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: TKLYTCPQSWITQSHIPWASDSW*ELRWYR
Trigger: CCTATACCATCTCAGCTCTCACCAGCTGTCAGATGC...CCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp CCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGTTGTTGCCCATGAAATaGCCAGCTCCAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PTRLDQNVEYRNGHSSSPLLPMK*PAPKAK
Trigger: CTTTGCCTTTGGAGCTGGTCATTTCATGGGCAACAA...CGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp GTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATTTGTTGCCCATGAAATaGCCAGCTCCAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSSGLGPTRLDQNVEYRNLLPMK*PAPKAK
Trigger: CTTTGCCTTTGGAGCTGGTCATTTCATGGGCAACAA...ATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCACGGGACATGGATTGTaGCAAAGAAGTAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: SSGLGPTRLDQNVEYRNGTGHGL*QRSKMV
Trigger: CACCATCTTACTTCTTTGGCACAATCCATGTCCCGT...GCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp ACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCACGGGACATGGATTGTaGCAAAGAAGTAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TRMWSTGMAILQVRGVRFTGHGL*QRSKMV
Trigger: CACCATCTTACTTCTTTGGCACAATCCATGTCCCGT...GAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp AGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATACACAATGCTGCTCTaGAGGAAAGCCTCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLFWIGPNKARPECGVQEYTMLL*RKASLE
Trigger: CTCTAAGGAGGCTTTCCTGCAGAGCAGCATTGTGTA...TTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGTTCAATGGATGGCACTaGTCTTCCACCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWFNGWH*SSTFST
Trigger: AGTGGAAAAGGTGGAAGAGCAGTGCCATCCATTGAA...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGGCCAAAGAAGTAAGATaGTGGGTCTCGCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWAKEVR*WVSLNG
Trigger: ACCATTAAGCGAGACCCACCATCTTACTTCTTTGGC...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAAAGATGGTGGACAGAGTaGGCCGTGTGGAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HLPPKLDNPKSHSLEREERWWTE*AVWRSF
Trigger: AAAAGACCTCCACACGGCCCACTCTGTCCACCATCT...TTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAACTCCAGGTGGCGCTTaGGGCGGCAGTAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLTPGGA*GGSRCP
Trigger: GGGACATCTACTGCCGCCTCAAGCGCCACCTGGAGT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTACTCAAAGTACACAATaGTGCTCTGCAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GPTRLDQNVEYRNGHSSSTQSTQ*CSAGKP
Trigger: AGGCTTTCCTGCAGAGCAGCATTGTGTACTTTGAGT...ACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp TCACACAGAGCAAGCTCTGAGTCAGGTCAAATGAAGACAAGCTTGGGAATGGAATTCCACCTTTTCCACTaGCCCAGTCTGTTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SHRASSESGQMKTSLGMEFHLFH*PSLFPQ
Trigger: CTGAGGAAACAGACTGGGGCAGTGGAAAAGGTGGAA...TTCCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGATTCAATGGATGGCACTaGTCTTCCACCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: FKSSLFWIGPNKARPECGFNGWH*SSTFST
Trigger: AGTGGAAAAGGTGGAAGAGCAGTGCCATCCATTGAA...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTACAAAACTGTACACCTaGCCCCAAAGTTGGATAACC +
Preference number: 4 (lower is better)
Translates to: GPTRLDQNVEYRNGHSSSTKLYT*PQSWIT
Trigger: GGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT...ACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp CCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTAAAGAAGTAAGATGGTaGGTCTCGCTTAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: PECGVQEWPFFKSEGSGSKEVRW*VSLNGP
Trigger: TGGACCATTAAGCGAGACCCACCATCTTACTTCTTT...AGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGCTTGCCGCGCTGGTCTaGGGTCATCCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKLAALV*GHPQGH
Trigger: ATGCCCTTGTGGATGACCCCAGACCAGCGCGGCAAG...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAAACCCATTCAATGGATaGCACTGCTCTTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVNPFNG*HCSSTF
Trigger: AAAGGTGGAAGAGCAGTGCCATCCATTGAATGGGTT...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAGAGAAGAATCAACACTaGGCCGCTTTTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: KSSLFWIGPNKARPECGVEKNQH*AAFSRA
Trigger: TGCTCTTGAAAAAGCGGCCCAGTGTTGATTCTTCTC...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAACCTGCCCCCAAAGTTaGATAACCCAAAGTCACATT +
Preference number: 4 (lower is better)
Translates to: FKSSLFWIGPNKARPECGTCPQS*ITQSHI
Trigger: AATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGT...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TGTTACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCCTGTGTTGTTGCCCATaGAATGACCAGCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CYKTVHLPPKLDNPKSHSLCCCP*NDQLQR
Trigger: CCTTTGGAGCTGGTCATTTCATGGGCAACAACACAG...GGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGAGCAAAGATGACCTGTaGAAAGTTCAACCCATTCAA +
Preference number: 4 (lower is better)
Translates to: LFWIGPNKARPECGVQEWSKDDL*KVQPIQ
Trigger: TTGAATGGGTTGAACTTTTCACAGGTCATCTTTGCT...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR GCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGACTCAAAGTACACAATaGTGCTCTGCAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSETQSTQ*CSAGKP
Trigger: AGGCTTTCCTGCAGAGCAGCATTGTGTACTTTGAGT...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGACAAAACTGTACACCTaGCCCCAAAGTTGGATAACC +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSETKLYT*PQSWIT
Trigger: GGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR GCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTGATCTGAAGACTGCCTaGTCGCAGGCTTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRADLKTA*SQAFLL
Trigger: CAGCAGGAAAGCCTGCGAGCAGGCAGTCTTCAGATC...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAAAAGAAGTAAGATGGTaGGTCTCGCTTAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: FKSSLFWIGPNKARPECGKEVRW*VSLNGP
Trigger: TGGACCATTAAGCGAGACCCACCATCTTACTTCTTT...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGAACCCATTCAATGGATaGCACTGCTCTTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSENPFNG*HCSSTF
Trigger: AAAGGTGGAAGAGCAGTGCCATCCATTGAATGGGTT...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR TCA 90 bp TCAACACTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGAAAATTGGGAACCTGTaGAAAGTTCAACCCATTCAA +
Preference number: 4 (lower is better)
Translates to: STLGRFFKSSLFWIGPNKKIGNL*KVQPIQ
Trigger: TTGAATGGGTTGAACTTTTCACAGGTTCCCAATTTT...CTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAGTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335459.9
CDS-3UTR TCA 90 bp AACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGTTCAAAGCAAAGATaGCCTGTGAAAAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: NKARPECGVQEWPFFKSEGSKQR*PVKSST
Trigger: GGTTGAACTTTTCACAGGTCATCTTTGCTTTGAACC...CTCGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR CCA 90 bp CACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAAGAGAAGAATCAACACTaGGCCGCTTTTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HLPPKLDNPKSHSLEREEEKNQH*AAFSRA
Trigger: TGCTCTTGAAAAAGCGGCCCAGTGTTGATTCTTCTC...TTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CCA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTTTAAGGATGGAGCTTTaGAGGAACTTTGAACCCATT +
Preference number: 4 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACLRMEL*RNFEPI
Trigger: AATGGGTTCAAAGTTCCTCCAAAGCTCCATCCTTAA...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGGCAGTGATGCGCTCCTaGGGTGGTAGCGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMAVMRS*GGSVAL
Trigger: TAATGCCACGCTACCACCTCAGGAGCGCATCACTGC...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAAGGGGATCTGAAGACTaGCTGCTCGCAGGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLRGSED*LLAGFP
Trigger: AGGAAAGCCTGCGAGCAGGCAGTCTTCAGATCCCCT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGTTCAGCTCGCTTTGTTaGGGCTTGAGCTCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKFSSLC*GLSSQL
Trigger: CAACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAA...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAGGCAGTAGATGTCCCTaGGGAGCACATCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLGSRCP*GAHLGG
Trigger: ACCTCCAAGATGTGCTCCCCAGGGACATCTACTGCC...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGACCTGGGAGCTGTCATaGCTGAGGATGACGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMTWELS*LRMTEL
Trigger: CAGCTCCGTCATCCTCAGCCATGACAGCTCCCAGGT...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAGCATCTGACAGCTGGTaGGAGCTGAGATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLASDSW*ELRWYR
Trigger: CCTATACCATCTCAGCTCTCACCAGCTGTCAGATGC...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAGCTTTGGAGGAACTTTaGACCCATTCTGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLALEEL*THSVPS
Trigger: GGAGGGGACAGAATGGGTTCAAAGTTCCTCCAAAGC...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTACACAGAGCAAGCTCTaGGTCAGGTCAAATGAAGAC +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRATQSKL*VRSNED
Trigger: GTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGT...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGTGCTGCAGGAGGGTCTaGTTCAAAGCAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKCCRRV*FKAKMT
Trigger: GGTCATCTTTGCTTTGAACCAGACCCTCCTGCAGCA...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTATAAAATTGGGAACCTaGGAGCTGTCATGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAIKLGT*ELSWLR
Trigger: CCTCAGCCATGACAGCTCCCAGGTTCCCAATTTTAT...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGTTCTCAGGTCTTTCCTaGGCATGTGCACAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKFSGLS*ACAQLF
Trigger: GAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAA...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
3UTR CAA 72 bp AGAGCAAGCTCTGAGTCAGGTCAAATGAAGACAAGCTaGGGAATGGAAATTTCAGGGAACTATTGGACATGT +
Preference number: 4 (lower is better)
Translates to: RASSESGQMKTS*GMEISGNYWTC
Trigger: ACATGTCCAATAGTTCCCTGAAATTTCCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAGAGCTTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGACAGCTGGTGAGAGCTaGGATGGTATAGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMTAGES*DGIGVC
Trigger: ACAGACCCCTATACCATCTCAGCTCTCACCAGCTGT...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTTTTTCAAGGCTACTGTaGAGCAGCTCCAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAFSRLL*SSSKGK
Trigger: TTTGCCTTTGGAGCTGCTTCACAGTAGCCTTGAAAA...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGCAAAGTACACAATGCTaGTCTGCAGGAAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKQSTQC*SAGKPP
Trigger: AGGAGGCTTTCCTGCAGAGCAGCATTGTGTACTTTG...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTGGTTCAAAGCAAAGATaGCCTGTGAAAAGTTCAACC +
Preference number: 4 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAGSKQR*PVKSST
Trigger: GGTTGAACTTTTCACAGGTCATCTTTGCTTTGAACC...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp TCACACAGAGCAAGCTCTGAGTCAGGTCAAATGAAGACAAGCTTGGGAATGGAAATTTCAGGGAACTATTaGACATGTCAAATAGTGATG +
Preference number: 4 (lower is better)
Translates to: SHRASSESGQMKTSLGMEISGNY*TCQIVM
Trigger: CATCACTATTTGACATGTCCAATAGTTCCCTGAAAT...TTCCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAGAGCTTGCTCTGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGCTGAGTCAGGTCAAATaGAGACAAGCTTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMLSQVK*RQAWEW
Trigger: CCATTCCCAAGCTTGTCTTCATTTGACCTGACTCAG...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAACGGGACATGGATTGTaGCAAAGAAGTAAGATGGTG +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLTGHGL*QRSKMV
Trigger: CACCATCTTACTTCTTTGGCACAATCCATGTCCCGT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGTACACAATGCTGCTCTaGAGGAAAGCCTCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMYTMLL*RKASLE
Trigger: CTCTAAGGAGGCTTTCCTGCAGAGCAGCATTGTGTA...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAGCAAAGATGACCTGTaGAAAGTTCAACCCATTCAA +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKSKDDL*KVQPIQ
Trigger: TTGAATGGGTTGAACTTTTCACAGGTCATCTTTGCT...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR TCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGTTAAACAGCTGCTACTaGTTGTTTTCAACACACACC +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKLNSCY*LFSTHT
Trigger: GGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAA...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGACTCAAAGTACACAATaGTGCTCTGCAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMTQSTQ*CSAGKP
Trigger: AGGCTTTCCTGCAGAGCAGCATTGTGTACTTTGAGT...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR GCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGTTCAATGGATGGCACTaGTCTTCCACCTTTTCCACT +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMFNGWH*SSTFST
Trigger: AGTGGAAAAGGTGGAAGAGCAGTGCCATCCATTGAA...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GCAGCCCCTTGTAAGCTTCAATTAATATTGCTATTTCCAGCAACTATGATGTTAAAAGAAGTAAGATGGTaGGTCTCGCTTAATGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAPCKLQLILLFPATMMLKEVRW*VSLNGP
Trigger: TGGACCATTAAGCGAGACCCACCATCTTACTTCTTT...TAACATCATAGTTGCTGGAAATAGCAATATTAATTGAAGCTTACAAGGGGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGAACCCATTCAATGGATaGCACTGCTCTTCCACCTTT +
Preference number: 4 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMNPFNG*HCSSTF
Trigger: AAAGGTGGAAGAGCAGTGCCATCCATTGAATGGGTT...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CCA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAGACAAGCTTGGGAATaGAAATTTCAGGGAACTATT +
Preference number: 4 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKRQAWE*KFQGTI
Trigger: AATAGTTCCCTGAAATTTCCATTCCCAAGCTTGTCT...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS GCA 90 bp GCCCCGCGCCGCGAAGCTGCGCCCGTGGGCAGGAGGCAGAGGGTCTaGAGCAGGAACCAGCTCCAGGGACTCATCCTCCTCAAGGCGGCT +
Preference number: 5 (lower is better)
Translates to: APRREAAPVGRRQRV*SRNQLQGLILLKAA
Trigger: AGCCGCCTTGAGGAGGATGAGTCCCTGGAGCTGGTTCCTGCTGCAGACCCTCTGCCTCCTGCCCACGGGCGCAGCTTCGCGGCGCGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335459.9
ENST00000409133.1
ENST00000409520.7
CDS GCA 90 bp CACCTGCCTGGCAGAACCCCCACCACGAGGGCCCACCCACCGAACTaGTCAGACCAAGCTGTGCCCCAGCCTCCCACCAGCCCAGAACCC +
Preference number: 5 (lower is better)
Translates to: HLPGRTPTTRAHPPN*SDQAVPQPPTSPEP
Trigger: GGGTTCTGGGCTGGTGGGAGGCTGGGGCACAGCTTGGTCTGAGCAGTTCGGTGGGTGGGCCCTCGTGGTGGGGGTTCTGCCAGGCAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 90 bp CCCCCACCACGAGGGCCCACCCACCGAACTGCTCAGACCAAGCTGTaGCCCAGCCTCCCACCAGCCCAGAACCCAGTCGACCTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PPPRGPTHRTAQTKL*PSLPPAQNPVDLSP
Trigger: AGGGGAAAGGTCGACTGGGTTCTGGGCTGGTGGGAGGCTGGGGCACAGCTTGGTCTGAGCAGTTCGGTGGGTGGGCCCTCGTGGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 90 bp GCGGACCCACAGATCGCTGAATTGCCGGAGTCGCGGCCTCCGCTGTaGCCGCCTCCGCTTCTTCCGGAACCTCTGTTCGGCCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: ADPQIAELPESRPPL*PPPLLPEPLFGLTG
Trigger: CCCAGTGAGGCCGAACAGAGGTTCCGGAAGAAGCGGAGGCGGTCACAGCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 90 bp GGGACTATGTCACTCTCCTCCAGGCGGACCCACAGATCGCTGAATTaGCGGAGTCGCGGCCTCCGCTGTGACCGCCTCCGCTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: GTMSLSSRRTHRSLN*RSRGLRCDRLRFFR
Trigger: CCGGAAGAAGCGGAGGCGGTCACAGCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCCGCCTGGAGGAGAGTGACATAGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS TCA 90 bp GTTGCGGGACTATGTCACTCTCCTCCAGGCGGACCCACAGATCGCTaGATTGCCGGAGTCGCGGCCTCCGCTGTGACCGCCTCCGCTTCT +
Preference number: 5 (lower is better)
Translates to: VAGLCHSPPGGPTDR*IAGVAASAVTASAS
Trigger: AGAAGCGGAGGCGGTCACAGCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCCGCCTGGAGGAGAGTGACATAGTCCCGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 90 bp GTGTCGGCACTTCCAGGCCGGGACACAAGGGGAGGCAGCGTTGAGTaGCCTGAGGATACGGCTTCTGGTGCCGGTACTTCCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: VSALPGRDTRGGSVE*PEDTASGAGTSRVG
Trigger: CCCTACCCTGGAAGTACCGGCACCAGAAGCCGTATCCTCAGGGCACTCAACGCTGCCTCCCCTTGTGTCCCGGCCTGGAAGTGCCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 90 bp AGAGACAGGCAGGCACTGCTGGCCACCATCTGGCTGTGGTGGGAATaGCCACGGCGAGGGAGCCGCAGTTCAGTGGAGATGTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: RDRQALLATIWLWWE*PRRGSRSSVEMCLS
Trigger: GGACAGGCACATCTCCACTGAACTGCGGCTCCCTCGCCGTGGGCATTCCCACCACAGCCAGATGGTGGCCAGCAGTGCCTGCCTGTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 90 bp CCTGAGTACTGGGCAAGCTCAGGTGTTGGTGTTGCCTGTTCCACCTaGCTGGCAGAACCCCCACCACGAGGGCCCACCCACCGAACTGCT +
Preference number: 5 (lower is better)
Translates to: PEYWASSGVGVACST*LAEPPPRGPTHRTA
Trigger: AGCAGTTCGGTGGGTGGGCCCTCGTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS-3UTR CAA 90 bp CTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGAGGCTTGAGCTCGCAGTaGGCGGTGCCGGGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: LGRFFKSSLFWIGPNKARGLSSQ*AVPGAP
Trigger: CGGGGCGCCCGGCACCGCCAACTGCGAGCTCAAGCC...TCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS GCA 90 bp TGGTGGGAATGCCCACGGCGAGGGAGCCGCAGTTCAGTGGAGATGTaGCTGTCCAGGACAGGGACCTGGAGTTGCGGGACTATGTCACTC +
Preference number: 5 (lower is better)
Translates to: WWECPRRGSRSSVEM*LSRTGTWSCGTMSL
Trigger: GAGTGACATAGTCCCGCAACTCCAGGTCCCTGTCCTGGACAGGCACATCTCCACTGAACTGCGGCTCCCTCGCCGTGGGCATTCCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 90 bp ACCCACTGTAGTCTCAGGAGTCACAACCAGGGAACCCTGGGAGCCTaGGGCAGTACAGCAAATAGGCCCCGAGAAGGAAGCAGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: THCSLRSHNQGTLGA*GSTANRPREGSRRP
Trigger: GGGCCTTCTGCTTCCTTCTCGGGGCCTATTTGCTGTACTGCCGCAGGCTCCCAGGGTTCCCTGGTTGTGACTCCTGAGACTACAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 90 bp GGAGGCATCCTCGTGGCATGGCTGGCGTGGTCTGAGTCTTTTAGTTaGGTATGCGTGGGCAGTGCCACTGCAGCAAAGCCCCTCGATGGA +
Preference number: 5 (lower is better)
Translates to: GGILVAWLAWSESFS*VCVGSATAAKPLDG
Trigger: TCCATCGAGGGGCTTTGCTGCAGTGGCACTGCCCACGCATACTCAACTAAAAGACTCAGACCACGCCAGCCATGCCACGAGGATGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489999.1
CDS-3UTR CAA 90 bp AGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCACCACAGATCGCTGAATaGCCGGAGTCGCGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: RNGHSSSPRGQVLSLVLPPQIAE*PESRPP
Trigger: CGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGG...TGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS TCA 90 bp CTCGCTTTGCTCGTGGCATGGCTGGCGTGGTCTGAGTCTTTTAGTTaGGTATGCGTGGGCAGTGCCACTGCAGCAAAGCCCCTCGATGGA +
Preference number: 5 (lower is better)
Translates to: LALLVAWLAWSESFS*VCVGSATAAKPLDG
Trigger: TCCATCGAGGGGCTTTGCTGCAGTGGCACTGCCCACGCATACTCAACTAAAAGACTCAGACCACGCCAGCCATGCCACGAGCAAAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474298.5
CDS-3UTR CAA 90 bp TGTTACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCGGCTTGAGCTCGCAGTaGGCGGTGCCGGGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: CYKTVHLPPKLDNPKSHSGLSSQ*AVPGAP
Trigger: CGGGGCGCCCGGCACCGCCAACTGCGAGCTCAAGCC...GGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCGCTTTGTTGGGGCTaGAGCTCGCAGTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSSLCWG*SSQLAV
Trigger: CACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCGA...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp CTGGGCCGCTTTTTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCTGGGGAGCACATCTaGGAGGTTCTCGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LGRFFKSSLFWIGPNKARPGEHI*EVLALW
Trigger: CCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAGG...TCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAAAAAGCGGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTCCACAGATCGCTGAATaGCCGGAGTCGCGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GLGPTRLDQNVEYRNGHSPQIAE*PESRPP
Trigger: CGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGG...AGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS TCA 90 bp TGGAGGCTGGGAAGTCCGAGATCAAGGCACTGGCCTTTGGTCTGGTaGGGGCCTTCTTGCTGCATCCTCACATGGAAGAAGACAGAAGGG +
Preference number: 5 (lower is better)
Translates to: WRLGSPRSRHWPLVW*GPSCCILTWKKTEG
Trigger: CCCTTCTGTCTTCTTCCATGTGAGGATGCAGCAAGAAGGCCCTCACCAGACCAAAGGCCAGTGCCTTGATCTCGGACTTCCCAGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS-3UTR CAA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCTGGGGAGCACATCTaGGAGGTTCTCGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: LFWIGPNKARPECGVQEWPGEHI*EVLALW
Trigger: CCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAGG...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTGGCTTGAGCTCGCAGTaGGCGGTGCCGGGCGCCCCG +
Preference number: 5 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAGLSSQ*AVPGAP
Trigger: CGGGGCGCCCGGCACCGCCAACTGCGAGCTCAAGCC...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATCGCTTTGTTGGGGCTaGAGCTCGCAGTTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: FWIGPNKARPECGVQEWPSLCWG*SSQLAV
Trigger: CACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCGA...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS GCA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTaGTTCCAGTCGTTACAGGAGGGGTGTCTCTGTTTGGAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GMAILQVRGVRFLAW*FQSLQEGCLCLESQ
Trigger: CTGGCTTTCCAAACAGAGACACCCCTCCTGTAACGACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
CDS-3UTR CAA 90 bp CTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGGACAGGGACCTGGAGTaGCGGGACTATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: LFWIGPNKARPECGVQEWDRDLE*RDYVTL
Trigger: GAGAGTGACATAGTCCCGCAACTCCAGGTCCCTGTC...CCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp AATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGTCGCAGTCTCTTCTGGATaGGGCCCAACAAGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: NGHSSSPRGQVLSLVLPVAVSSG*GPTRLD
Trigger: GTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGC...GACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GTGGAGTACAGGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGATTCAGCTCGCTTTGTaGGGGCTTGAGCTCGCAGTT +
Preference number: 5 (lower is better)
Translates to: VEYRNGHSSSPRGQVLSLIQLAL*GLELAV
Trigger: AACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAAT...CAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCCTGTACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp TCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGGGAATTCAGCTCGCTTaGTTGGGGCTTGAGCTCGCA +
Preference number: 5 (lower is better)
Translates to: SRAVSSGLGPTRLDQNVEGIQLA*LGLELA
Trigger: TGCGAGCTCAAGCCCCAACAAAGCGAGCTGAATTCC...CTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGACAGGGACCTGGAGTaGCGGGACTATGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: FKSSLFWIGPNKARPECGDRDLE*RDYVTL
Trigger: GAGAGTGACATAGTCCCGCAACTCCAGGTCCCTGTC...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp TCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCATTCAGCTCGCTTTGTaGGGGCTTGAGCTCGCAGTT +
Preference number: 5 (lower is better)
Translates to: SSGLGPTRLDQNVEYRNGIQLAL*GLELAV
Trigger: AACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAAT...GCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp TTCAAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGCAGTCTCTTCTGGATaGGGCCCAACAAGGCTAGAC +
Preference number: 5 (lower is better)
Translates to: FKSSLFWIGPNKARPECGAVSSG*GPTRLD
Trigger: GTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGC...TCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GCCAGAGGTGAGAGATTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTGTACGGGACATGGATaGTGCCAAAGAAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: ARGERLGPSQVFPGHVHSCTGHG*CQRSKM
Trigger: CATCTTACTTCTTTGGCACAATCCATGTCCCGTACA...GCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAATCTCTCACCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp CACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGAAAGAGAAGAAGAGGGGTGTCTCTGTTaGGAAAGCCAGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: HLPPKLDNPKSHSLEREEEGCLC*ESQHQH
Trigger: GTGCTGGTGCTGGCTTTCCAAACAGAGACACCCCTC...TTCTTCTCTTTCCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp ACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGGAGGGGTGTCTCTGTTaGGAAAGCCAGCACCAGCAC +
Preference number: 5 (lower is better)
Translates to: TKLYTCPQSWITQSHIPWEGCLC*ESQHQH
Trigger: GTGCTGGTGCTGGCTTTCCAAACAGAGACACCCCTC...CCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp ACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGGGAATTCAGCTCGCTTaGTTGGGGCTTGAGCTCGCA +
Preference number: 5 (lower is better)
Translates to: TKLYTCPQSWITQSHIPWGIQLA*LGLELA
Trigger: TGCGAGCTCAAGCCCCAACAAAGCGAGCTGAATTCC...CCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTCCTGGGGAGCACATCTaGGAGGTTCTCGCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAPGEHI*EVLALW
Trigger: CCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAGG...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp TTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCAGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: FWIGPNKARPECGVQEWPAKKKP*SGNSSK
Trigger: TTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGC...TGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS TCA 90 bp ATCTTAGGCACCAGCTCACATCGTGCATCCAGGGCTGCTCCATGCTaGGTAATTGCTGCATATAAACCAAGCCAAGCTTGTAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: ILGTSSHRASRAAPC*VIAAYKPSQACKPA
Trigger: AGCTGGTTTACAAGCTTGGCTTGGTTTATATGCAGCAATTACTCAGCATGGAGCAGCCCTGGATGCACGATGTGAGCTGGTGCCTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460991.1
CDS TCA 90 bp TTCCCTTCTTGGGAGAAGCCTCAGATTTCAGAGGCTAATCAGAGGTaGCCCACTACTCACCAGCTCCAAAGGCAAAGAAGAAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: FPSWEKPQISEANQR*PTTHQLQRQRRSLC
Trigger: ACAAAGGCTTCTTCTTTGCCTTTGGAGCTGGTGAGTAGTGGGTCACCTCTGATTAGCCTCTGAAATCTGAGGCTTCTCCCAAGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460991.1
CDS TCA 90 bp ACGCCGCAAAACATCCAGCACTGTGTTGTTGCCCATGAAATGACCTaGAGTCACAAAGCTAAGGGGATAGCCTGGACATCAAACTGCAAC +
Preference number: 5 (lower is better)
Translates to: TPQNIQHCVVAHEMT*SHKAKGIAWTSNCN
Trigger: GTTGCAGTTTGATGTCCAGGCTATCCCCTTAGCTTTGTGACTTCAGGTCATTTCATGGGCAACAACACAGTGCTGGATGTTTTGCGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS-3UTR CAA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACAKKKP*SGNSSK
Trigger: TTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGC...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp TTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LGPTRLDQNVEYRNGHSSAKKKP*SGNSSK
Trigger: TTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGC...TGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTATTTTTACTCTTCCCTTaGTGGATGGGTCGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: KSSLFWIGPNKARPECGVFLLFP*WMGRPA
Trigger: TGCTGGACGACCCATCCACAAAGGGAAGAGTAAAAA...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GGAATGGCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTGCTTCCAGCCAAAGTCACATTCCTaGGAAAGAGAAGAATCAACA +
Preference number: 5 (lower is better)
Translates to: GMAILQVRGVRFLAWCFQPKSHS*EREEST
Trigger: TGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGG...CTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGCCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp AGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGTACGGGACATGGATaGTGCCAAAGAAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: SLFWIGPNKARPECGVQECTGHG*CQRSKM
Trigger: CATCTTACTTCTTTGGCACAATCCATGTCCCGTACA...TTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp CCAACAAGGCTAGACCAGAATGTGGAGTACAGGAATGGCCATTCTTCAAGTCCGTGTACGGGACATGGATaGTGCCAAAGAAGTAAGATG +
Preference number: 5 (lower is better)
Translates to: PTRLDQNVEYRNGHSSSPCTGHG*CQRSKM
Trigger: CATCTTACTTCTTTGGCACAATCCATGTCCCGTACA...CGGACTTGAAGAATGGCCATTCCTGTACTCCACATTCTGGTCTAGCCTTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp TTAGGACCTTCTCAGGTCTTTCCTGGGCATGTGCACAGCTCTTCTCATGCATGTGTGGCATTAATAAAATaGGGAACCTGGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LGPSQVFPGHVHSSSHACVALIK*GTWELS
Trigger: TGACAGCTCCCAGGTTCCCAATTTTATTAATGCCAC...ACATGCATGAGAAGAGCTGTGCACATGCCCAGGAAAGACCTGAGAAGGTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp AAGAGCAGTCTCTTCTGGATTGGGCCCAACAAGGCTAGACCAGAATGTGGAGTAGTGGCATTAATAAAATaGGGAACCTGGGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: KSSLFWIGPNKARPECGVVALIK*GTWELS
Trigger: TGACAGCTCCCAGGTTCCCAATTTTATTAATGCCAC...TACTCCACATTCTGGTCTAGCCTTGTTGGGCCCAATCCAGAAGAGACTGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409520.7
CDS-3UTR CAA 90 bp ACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCTTGGTTTTTACTCTTCCCTTaGTGGATGGGTCGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: TKLYTCPQSWITQSHIPWFLLFP*WMGRPA
Trigger: TGCTGGACGACCCATCCACAAAGGGAAGAGTAAAAA...CCAAGGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAATAGGGCTATTCAGCTCGCTTTGTaGGGGCTTGAGCTCGCAGTT +
Preference number: 5 (lower is better)
Translates to: DVKQLLLIVFNTHPKNRAIQLAL*GLELAV
Trigger: AACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAAT...AGCCCTATTCTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS GCA 90 bp GAAGAAAACTACCACATACTCACGGGCATTGCTGAGGGCACAAACTaGAGTTTGTTTGTGGCAGAACTTTTCAATGAGCATAATGTGGGA +
Preference number: 5 (lower is better)
Translates to: EENYHILTGIAEGTN*SLFVAELFNEHNVG
Trigger: TCCCACATTATGCTCATTGAAAAGTTCTGCCACAAACAAACTGCAGTTTGTGCCCTCAGCAATGCCCGTGAGTATGTGGTAGTTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 90 bp ATGCTTCAACAGGCAATTTATGACTTTGCCTTAGCTTTCACACTCTaGTTACACAGAGCCTCAAGATCAGCCAGAGGTGAGAGATTAGGA +
Preference number: 5 (lower is better)
Translates to: MLQQAIYDFALAFTL*LHRASRSARGERLG
Trigger: TCCTAATCTCTCACCTCTGGCTGATCTTGAGGCTCTGTGTAAGCAGAGTGTGAAAGCTAAGGCAAAGTCATAAATTGCCTGTTGAAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS GCA 90 bp CTGCTGTTAATCCTATTGGGGATCCCTTGTCTGCTTTGCTCTCACTaGTTTCAAGATTCTGTGTCTTTGGCTTTTGACAGTTTGGCTATG +
Preference number: 5 (lower is better)
Translates to: LLLILLGIPCLLCSH*FQDSVSLAFDSLAM
Trigger: CATAGCCAAACTGTCAAAAGCCAAAGACACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS-3UTR CAA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGGGAATTCAGCTCGCTTaGTTGGGGCTTGAGCTCGCA +
Preference number: 5 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMGIQLA*LGLELA
Trigger: TGCGAGCTCAAGCCCCAACAAAGCGAGCTGAATTCC...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS-3UTR CAA 90 bp AGCAACTATGATGTTAAACAGCTGCTACTGATTGTTTTCAACACACACCCTAAGAGCTTTGGAGGAACTTaGAACCCATTCTGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SNYDVKQLLLIVFNTHPKSFGGT*NPFCPL
Trigger: GAGGGGACAGAATGGGTTCAAAGTTCCTCCAAAGCT...CTTAGGGTGTGTGTTGAAAACAATCAGTAGCAGCTGTTTAACATCATAGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS GCA 90 bp ATGAGAAATCTGCTGTTAATCCTATTGGGGATCCCTTGTCTGCTTTaGTCTCACTGCTTTCAAGATTCTGTGTCTTTGGCTTTTGACAGT +
Preference number: 5 (lower is better)
Translates to: MRNLLLILLGIPCLL*SHCFQDSVSLAFDS
Trigger: ACTGTCAAAAGCCAAAGACACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAGATTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS-3UTR CAA 90 bp TGTTACAAAACTGTACACCTGCCCCCAAAGTTGGATAACCCAAAGTCACATTCCCCAAAGTCACATTCCTaGGAAAGAGAAGAATCAACA +
Preference number: 5 (lower is better)
Translates to: CYKTVHLPPKLDNPKSHSPKSHS*EREEST
Trigger: TGTTGATTCTTCTCTTTCCAAGGAATGTGACTTTGG...GGAATGTGACTTTGGGTTATCCAACTTTGGGGGCAGGTGTACAGTTTTGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335459.9
ENST00000409520.7
CDS-3UTR CAA 90 bp GGAAATTTCAGGGAACTATTGGACATGTCAAATAGTGATGATTCTTTAAGGATGCAAATGAAGACAAGCTaGGGAATGGAAATTTCAGGG +
Preference number: 5 (lower is better)
Translates to: GNFRELLDMSNSDDSLRMQMKTS*GMEISG
Trigger: CCCTGAAATTTCCATTCCCAAGCTTGTCTTCATTTG...CATCCTTAAAGAATCATCACTATTTGACATGTCCAATAGTTCCCTGAAATTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409133.1
CDS CAA 72 bp GAATTCAGCTCGCTTTGTTGGGGCTTGAGCTCGCAGTaGGCGGTGCCGGGCGCCCCGCGCCGCGAAGCTGCG +
Preference number: 6 (lower is better)
Translates to: EFSSLCWGLSSQ*AVPGAPRREAA
Trigger: CGCAGCTTCGCGGCGCGGGGCGCCCGGCACCGCCAACTGCGAGCTCAAGCCCCAACAAAGCGAGCTGAATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335459.9
ENST00000409133.1
ENST00000409520.7
CDS GCA 72 bp TCACTCTCCTCCAGGCGGACCCACAGATCGCTGAATTaGCGGAGTCGCGGCCTCCGCTGTGACCGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: SLSSRRTHRSLN*RSRGLRCDRLR
Trigger: GCGGAGGCGGTCACAGCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCCGCCTGGAGGAGAGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS CCA 72 bp GCCTCCGCTTCTTCCGGAACCTCTGTTCGGCCTCACTaGGCGTGTCGGCACTTCCAGGCCGGGACACAAGGG +
Preference number: 6 (lower is better)
Translates to: ASASSGTSVRPH*ACRHFQAGTQG
Trigger: CCCTTGTGTCCCGGCCTGGAAGTGCCGACACGCCCAGTGAGGCCGAACAGAGGTTCCGGAAGAAGCGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS TCA 72 bp CTATGTCACTCTCCTCCAGGCGGACCCACAGATCGCTaGATTGCCGGAGTCGCGGCCTCCGCTGTGACCGCC +
Preference number: 6 (lower is better)
Translates to: LCHSPPGGPTDR*IAGVAASAVTA
Trigger: GGCGGTCACAGCGGAGGCCGCGACTCCGGCAATTCAGCGATCTGTGGGTCCGCCTGGAGGAGAGTGACATAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 72 bp TGCCCACGGCGAGGGAGCCGCAGTTCAGTGGAGATGTaGCTGTCCAGGACAGGGACCTGGAGTTGCGGGACT +
Preference number: 6 (lower is better)
Translates to: CPRRGSRSSVEM*LSRTGTWSCGT
Trigger: AGTCCCGCAACTCCAGGTCCCTGTCCTGGACAGGCACATCTCCACTGAACTGCGGCTCCCTCGCCGTGGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 72 bp CAGGCACTGCTGGCCACCATCTGGCTGTGGTGGGAATaGCCACGGCGAGGGAGCCGCAGTTCAGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: QALLATIWLWWE*PRRGSRSSVEM
Trigger: CATCTCCACTGAACTGCGGCTCCCTCGCCGTGGGCATTCCCACCACAGCCAGATGGTGGCCAGCAGTGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS GCA 72 bp TGGGCAAGCTCAGGTGTTGGTGTTGCCTGTTCCACCTaGCTGGCAGAACCCCCACCACGAGGGCCCACCCAC +
Preference number: 6 (lower is better)
Translates to: WASSGVGVACST*LAEPPPRGPTH
Trigger: GTGGGTGGGCCCTCGTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp GCAGGGGTGGAAAGCAGAAGCCCACACTCCAGCACCTaGGCACCTTCCATCCACACAGACCCGGGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: AGVESRSPHSST*APSIHTDPGWC
Trigger: GCACCACCCCGGGTCTGTGTGGATGGAAGGTGCCCAGGTGCTGGAGTGTGGGCTTCTGCTTTCCACCCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp CTTCCAGGCCGGGACACAAGGGGAGGCAGCGTTGAGTaGCCTGAGGATACGGCTTCTGGTGCCGGTACTTCC +
Preference number: 6 (lower is better)
Translates to: LPGRDTRGGSVE*PEDTASGAGTS
Trigger: GGAAGTACCGGCACCAGAAGCCGTATCCTCAGGGCACTCAACGCTGCCTCCCCTTGTGTCCCGGCCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS CCA 72 bp CAAGCTCAGGTGTTGGTGTTGCCTGTTCCACCTGCCTaGCAGAACCCCCACCACGAGGGCCCACCCACCGAA +
Preference number: 6 (lower is better)
Translates to: QAQVLVLPVPPA*QNPHHEGPPTE
Trigger: TTCGGTGGGTGGGCCCTCGTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp ATGCGTGGGCAGTGCCACTGCAGCAAAGCCCCTCGATaGAGTAGAGTTCCTGCCGCAAAGGGGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: MRGQCHCSKAPR*SRVPAAKGRRW
Trigger: CCACCTCCTCCCCTTTGCGGCAGGAACTCTACTCCATCGAGGGGCTTTGCTGCAGTGGCACTGCCCACGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474298.5
ENST00000489999.1
CDS CCA 72 bp AGCACCTGGGCACCTTCCATCCACACAGACCCGGGGTaGTGCATTGGGACACCACCACTGGCTCTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: STWAPSIHTDPG*CIGTPPLALFP
Trigger: AGGAAACAGAGCCAGTGGTGGTGTCCCAATGCACCACCCCGGGTCTGTGTGGATGGAAGGTGCCCAGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp CCCACTGTAGTCTCAGGAGTCACAACCAGGGAACCCTaGGAGCCTGCGGCAGTACAGCAAATAGGCCCCGAG +
Preference number: 6 (lower is better)
Translates to: PTVVSGVTTREP*EPAAVQQIGPE
Trigger: CTCGGGGCCTATTTGCTGTACTGCCGCAGGCTCCCAGGGTTCCCTGGTTGTGACTCCTGAGACTACAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp AGTGGAGATGTGCCTGTCCAGGACAGGGACCTGGAGTaGCGGGACTATGTCACTCTCCTCCAGGCGGACCCA +
Preference number: 6 (lower is better)
Translates to: SGDVPVQDRDLE*RDYVTLLQADP
Trigger: TGGGTCCGCCTGGAGGAGAGTGACATAGTCCCGCAACTCCAGGTCCCTGTCCTGGACAGGCACATCTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS CAA 72 bp CAAGCCCTGAGTACTGGGCAAGCTCAGGTGTTGGTGTaGCCTGTTCCACCTGCCTGGCAGAACCCCCACCAC +
Preference number: 6 (lower is better)
Translates to: QALSTGQAQVLV*PVPPAWQNPHH
Trigger: GTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp ACCTGGGCACCTTCCATCCACACAGACCCGGGGTGGTaGATTGGGACACCACCACTGGCTCTGTTTCCTAAC +
Preference number: 6 (lower is better)
Translates to: TWAPSIHTDPGW*IGTPPLALFPN
Trigger: GTTAGGAAACAGAGCCAGTGGTGGTGTCCCAATGCACCACCCCGGGTCTGTGTGGATGGAAGGTGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp AGTCTCAGGAGTCACAACCAGGGAACCCTGGGAGCCTaGGGCAGTACAGCAAATAGGCCCCGAGAAGGAAGC +
Preference number: 6 (lower is better)
Translates to: SLRSHNQGTLGA*GSTANRPREGS
Trigger: GCTTCCTTCTCGGGGCCTATTTGCTGTACTGCCGCAGGCTCCCAGGGTTCCCTGGTTGTGACTCCTGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp CTTGAGGCGGCAGTAGATGTCCCTGGGGAGCACATCTaGGAGGTTCTCGCCCTGTGGCAGCATCTGACAGCT +
Preference number: 6 (lower is better)
Translates to: LEAAVDVPGEHI*EVLALWQHLTA
Trigger: AGCTGTCAGATGCTGCCACAGGGCGAGAACCTCCAAGATGTGCTCCCCAGGGACATCTACTGCCGCCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409133.1
ENST00000409520.7
ENST00000436322.1
CDS CAA 90 bp ATGACAAATCAAGCCCTGAGTACTGGGCAAGCTCAGGTGTTGGTGTaGCCTGTTCCACCTGCCTGGCAGAACCCCCACCACGAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: MTNQALSTGQAQVLV*PVPPAWQNPHHEGP
Trigger: TGGGCCCTCGTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGGGCTTGATTTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 72 bp CTCGTGGCATGGCTGGCGTGGTCTGAGTCTTTTAGTTaGGTATGCGTGGGCAGTGCCACTGCAGCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: LVAWLAWSESFS*VCVGSATAAKP
Trigger: GGGCTTTGCTGCAGTGGCACTGCCCACGCATACTCAACTAAAAGACTCAGACCACGCCAGCCATGCCACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474298.5
ENST00000489999.1
CDS CCA 72 bp GGCTTCTGGTGCCGGTACTTCCAGGGTAGGGACTTTTaGAGCAAAGATGGTGGACAGAGTGGGCCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: GFWCRYFQGRDF*SKDGGQSGPCG
Trigger: TCCACACGGCCCACTCTGTCCACCATCTTTGCTCCAAAAGTCCCTACCCTGGAAGTACCGGCACCAGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
ENST00000496500.5
CDS CCA 72 bp GGAGGCTGGGAAGTCCGAGATCAAGGCACTGGCCTTTaGTCTGGTGAGGGCCTTCTTGCTGCATCCTCACAT +
Preference number: 6 (lower is better)
Translates to: GGWEVRDQGTGL*SGEGLLAASSH
Trigger: ATGTGAGGATGCAGCAAGAAGGCCCTCACCAGACCAAAGGCCAGTGCCTTGATCTCGGACTTCCCAGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp GGGCACCTTCCATCCACACAGACCCGGGGTGGTGCATaGGGACACCACCACTGGCTCTGTTTCCTAACTTTC +
Preference number: 6 (lower is better)
Translates to: GHLPSTQTRGGA*GHHHWLCFLTF
Trigger: GAAAGTTAGGAAACAGAGCCAGTGGTGGTGTCCCAATGCACCACCCCGGGTCTGTGTGGATGGAAGGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp ACACAGACCCGGGGTGGTGCATTGGGACACCACCACTaGCTCTGTTTCCTAACTTTCTCATCTGGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: TQTRGGALGHHH*LCFLTFSSGVC
Trigger: GCAGACCCCAGATGAGAAAGTTAGGAAACAGAGCCAGTGGTGGTGTCCCAATGCACCACCCCGGGTCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp ACAAATCAAGCCCTGAGTACTGGGCAAGCTCAGGTGTaGGTGTTGCCTGTTCCACCTGCCTGGCAGAACCCC +
Preference number: 6 (lower is better)
Translates to: TNQALSTGQAQV*VLPVPPAWQNP
Trigger: GGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGGGCTTGATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 90 bp ATCAGTATGACAAATCAAGCCCTGAGTACTGGGCAAGCTCAGGTGTaGGTGTTGCCTGTTCCACCTGCCTGGCAGAACCCCCACCACGAG +
Preference number: 6 (lower is better)
Translates to: ISMTNQALSTGQAQV*VLPVPPAWQNPHHE
Trigger: CTCGTGGTGGGGGTTCTGCCAGGCAGGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGGGCTTGATTTGTCATACTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp GCCATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTaGTGCTTCCAGTCGTTACAGGAGGGGTGTCTCTGT +
Preference number: 6 (lower is better)
Translates to: AILQVRGVRFLA*CFQSLQEGCLC
Trigger: ACAGAGACACCCCTCCTGTAACGACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
CDS CAA 90 bp AGGCTGTGGCTGGAATGCCGACATGTGGCCTTTCCTTGTAGATGCTaGATTTTCTCACAACTTGGAGGCATCCTCGTGGCATGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RLWLECRHVAFPCRC*IFSQLGGILVAWLA
Trigger: CGCCAGCCATGCCACGAGGATGCCTCCAAGTTGTGAGAAAATCAAGCATCTACAAGGAAAGGCCACATGTCGGCATTCCAGCCACAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489999.1
CDS CCA 72 bp GCCCTGCATCAGTATGACAAATCAAGCCCTGAGTACTaGGCAAGCTCAGGTGTTGGTGTTGCCTGTTCCACC +
Preference number: 6 (lower is better)
Translates to: ALHQYDKSSPEY*ASSGVGVACST
Trigger: GGTGGAACAGGCAACACCAACACCTGAGCTTGCCCAGTACTCAGGGCTTGATTTGTCATACTGATGCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp CACTACTCACCAGCTCCAAAGGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAAAGGGCCTTCACCCGC +
Preference number: 6 (lower is better)
Translates to: HYSPAPKAKKKP*SGNSSKRAFTR
Trigger: GCGGGTGAAGGCCCTTTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGCCTTTGGAGCTGGTGAGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460991.1
CDS CAA 72 bp ATCAAGGCACTGGCCTTTGGTCTGGTGAGGGCCTTCTaGCTGCATCCTCACATGGAAGAAGACAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: IKALAFGLVRAF*LHPHMEEDRRA
Trigger: TGCCCTTCTGTCTTCTTCCATGTGAGGATGCAGCAAGAAGGCCCTCACCAGACCAAAGGCCAGTGCCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp GAGGTGACCCACTACTCACCAGCTCCAAAGGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAAAGGGCCTTCACCCGCTTCCCTATT +
Preference number: 6 (lower is better)
Translates to: EVTHYSPAPKAKKKP*SGNSSKRAFTRFPI
Trigger: AATAGGGAAGCGGGTGAAGGCCCTTTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGCCTTTGGAGCTGGTGAGTAGTGGGTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460991.1
CDS GCA 72 bp ATTCTTCAAGTCCGAGGGGTCAGGTTCTTAGCCTGGTaGTTCCAGTCGTTACAGGAGGGGTGTCTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: ILQVRGVRFLAW*FQSLQEGCLCL
Trigger: CAAACAGAGACACCCCTCCTGTAACGACTGGAAGCACCAGGCTAAGAACCTGACCCCTCGGACTTGAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335459.9
ENST00000409520.7
ENST00000479944.5
CDS CCA 72 bp GGTCTGGTTCAAAGCAAAGATGACCATTCTGGAGGCTaGGAAGTCCGAGATCAAGGCACTGGCCTTTGGTCT +
Preference number: 6 (lower is better)
Translates to: GLVQSKDDHSGG*EVRDQGTGLWS
Trigger: AGACCAAAGGCCAGTGCCTTGATCTCGGACTTCCCAGCCTCCAGAATGGTCATCTTTGCTTTGAACCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp TACTGTGAAGCAGCTCCAAAGGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAAAGGGCCTTCACCCGC +
Preference number: 6 (lower is better)
Translates to: YCEAAPKAKKKP*SGNSSKRAFTR
Trigger: GCGGGTGAAGGCCCTTTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGCCTTTGGAGCTGCTTCACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409133.1
ENST00000495990.5
CDS TCA 72 bp AGCTTCGAAGTCTCCTTCACTTGTGTGGTTAGTGGTTaGTGCTGGCTGTTAGCTCTGACCTCAGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: SFEVSFTCVVSG*CWLLALTSAEA
Trigger: AGCCTCAGCTGAGGTCAGAGCTAACAGCCAGCATCAACCACTAACCACACAAGTGAAGGAGACTTCGAAGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489999.1
CDS CAA 90 bp TTTCAAGGCTACTGTGAAGCAGCTCCAAAGGCAAAGAAGAAGCCTTaGTCAGGGAACTCCTCCAAAAGGGCCTTCACCCGCTTCCCTATT +
Preference number: 6 (lower is better)
Translates to: FQGYCEAAPKAKKKP*SGNSSKRAFTRFPI
Trigger: AATAGGGAAGCGGGTGAAGGCCCTTTTGGAGGAGTTCCCTGACAAAGGCTTCTTCTTTGCCTTTGGAGCTGCTTCACAGTAGCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409133.1
ENST00000495990.5
CDS TCA 72 bp ACCAGCTCACATCGTGCATCCAGGGCTGCTCCATGCTaGGTAATTGCTGCATATAAACCAAGCCAAGCTTGT +
Preference number: 6 (lower is better)
Translates to: TSSHRASRAAPC*VIAAYKPSQAC
Trigger: ACAAGCTTGGCTTGGTTTATATGCAGCAATTACTCAGCATGGAGCAGCCCTGGATGCACGATGTGAGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460991.1
CDS CCA 72 bp CAGCAAATAGGCCCCGAGAAGGAAGCAGAAGGCCCATaGTTCCTGCTTTCATTTTCACCCTCATGCATCAAA +
Preference number: 6 (lower is better)
Translates to: QQIGPEKEAEGP*FLLSFSPSCIK
Trigger: TTTGATGCATGAGGGTGAAAATGAAAGCAGGAACCATGGGCCTTCTGCTTCCTTCTCGGGGCCTATTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp GCCCAGGCTAACAGCTTTGTTCCAAGAAGCCATTTGTaGAGACAGTACAAATGTGCACACGGTGCCCAATCC +
Preference number: 6 (lower is better)
Translates to: AQANSFVPRSHL*RQYKCAHGAQS
Trigger: GGATTGGGCACCGTGTGCACATTTGTACTGTCTCAACAAATGGCTTCTTGGAACAAAGCTGTTAGCCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp GAGGCCCAGGCTAACAGCTTTGTTCCAAGAAGCCATTaGTTGAGACAGTACAAATGTGCACACGGTGCCCAA +
Preference number: 6 (lower is better)
Translates to: EAQANSFVPRSH*LRQYKCAHGAQ
Trigger: TTGGGCACCGTGTGCACATTTGTACTGTCTCAACAAATGGCTTCTTGGAACAAAGCTGTTAGCCTGGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp CTGGAATGCCGACATGTGGCCTTTCCTTGTAGATGCTaGATTTTCTCACAACTTGGAGGCATCCTCGTGGCA +
Preference number: 6 (lower is better)
Translates to: LECRHVAFPCRC*IFSQLGGILVA
Trigger: TGCCACGAGGATGCCTCCAAGTTGTGAGAAAATCAAGCATCTACAAGGAAAGGCCACATGTCGGCATTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489999.1
CDS CAA 90 bp CTCAAGAGTGAGGCCCAGGCTAACAGCTTTGTTCCAAGAAGCCATTaGTTGAGACAGTACAAATGTGCACACGGTGCCCAATCCAGACAT +
Preference number: 6 (lower is better)
Translates to: LKSEAQANSFVPRSH*LRQYKCAHGAQSRH
Trigger: ATGTCTGGATTGGGCACCGTGTGCACATTTGTACTGTCTCAACAAATGGCTTCTTGGAACAAAGCTGTTAGCCTGGGCCTCACTCTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp AGTCACAAAGCTAAGGGGATAGCCTGGACATCAAACTaGAACCTGGTAAGACCTCCCAGAAGAGGTGATATG +
Preference number: 6 (lower is better)
Translates to: SHKAKGIAWTSN*NLVRPPRRGDM
Trigger: CATATCACCTCTTCTGGGAGGTCTTACCAGGTTGCAGTTTGATGTCCAGGCTATCCCCTTAGCTTTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp TTTAAAGTCCAGACGTCTGCGCCATTAACTTCGGAGTaGTGTTCGCAGGAGCATTTGTCGCAGTGGTCTTTA +
Preference number: 6 (lower is better)
Translates to: FKVQTSAPLTSE*CSQEHLSQWSL
Trigger: TAAAGACCACTGCGACAAATGCTCCTGCGAACACCACTCCGAAGTTAATGGCGCAGACGTCTGGACTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436322.1
CDS CAA 72 bp GCGCCATTAACTTCGGAGTGGTGTTCGCAGGAGCATTaGTCGCAGTGGTCTTTAATTGCTTTAAGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: APLTSEWCSQEH*SQWSLIALSRC
Trigger: ACAGCGACTTAAAGCAATTAAAGACCACTGCGACAAATGCTCCTGCGAACACCACTCCGAAGTTAATGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436322.1
CDS CAA 90 bp AAGAGTGAGGCCCAGGCTAACAGCTTTGTTCCAAGAAGCCATTTGTaGAGACAGTACAAATGTGCACACGGTGCCCAATCCAGACATGAA +
Preference number: 6 (lower is better)
Translates to: KSEAQANSFVPRSHL*RQYKCAHGAQSRHE
Trigger: TTCATGTCTGGATTGGGCACCGTGTGCACATTTGTACTGTCTCAACAAATGGCTTCTTGGAACAAAGCTGTTAGCCTGGGCCTCACTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 72 bp AACATCCAGCACTGTGTTGTTGCCCATGAAATGACCTaGAGTCACAAAGCTAAGGGGATAGCCTGGACATCA +
Preference number: 6 (lower is better)
Translates to: NIQHCVVAHEMT*SHKAKGIAWTS
Trigger: TGATGTCCAGGCTATCCCCTTAGCTTTGTGACTTCAGGTCATTTCATGGGCAACAACACAGTGCTGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CCA 72 bp GTACGGGACATGGATTGTGCCAAAGAAGTAAGATGGTaGGTCTCGCTTAATGGTCCACAAGAAGGAATTCAG +
Preference number: 6 (lower is better)
Translates to: VRDMDCAKEVRW*VSLNGPQEGIQ
Trigger: CTGAATTCCTTCTTGTGGACCATTAAGCGAGACCCACCATCTTACTTCTTTGGCACAATCCATGTCCCGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335459.9
ENST00000409133.1
ENST00000409520.7
ENST00000436322.1
ENST00000474298.5
CDS CCA 72 bp GGTGTACGGGACATGGATTGTGCCAAAGAAGTAAGATaGTGGGTCTCGCTTAATGGTCCACAAGAAGGAATT +
Preference number: 6 (lower is better)
Translates to: GVRDMDCAKEVR*WVSLNGPQEGI
Trigger: AATTCCTTCTTGTGGACCATTAAGCGAGACCCACCATCTTACTTCTTTGGCACAATCCATGTCCCGTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335459.9
ENST00000409133.1
ENST00000409520.7
ENST00000436322.1
ENST00000474298.5
CDS CAA 72 bp TCACGGGCATTGCTGAGGGCACAAACTGCAGTTTGTTaGTGGCAGAACTTTTCAATGAGCATAATGTGGGAG +
Preference number: 6 (lower is better)
Translates to: SRALLRAQTAVC*WQNFSMSIMWE
Trigger: CTCCCACATTATGCTCATTGAAAAGTTCTGCCACAAACAAACTGCAGTTTGTGCCCTCAGCAATGCCCGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 72 bp AGAAGAAGAAAACTACCACATACTCACGGGCATTGCTaGGGGCACAAACTGCAGTTTGTTTGTGGCAGAACT +
Preference number: 6 (lower is better)
Translates to: RRRKLPHTHGHC*GHKLQFVCGRT
Trigger: AGTTCTGCCACAAACAAACTGCAGTTTGTGCCCTCAGCAATGCCCGTGAGTATGTGGTAGTTTTCTTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp TTACAGAAGAAGAAAACTACCACATACTCACGGGCATaGCTGAGGGCACAAACTGCAGTTTGTTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LQKKKTTTYSRA*LRAQTAVCLWQ
Trigger: CTGCCACAAACAAACTGCAGTTTGTGCCCTCAGCAATGCCCGTGAGTATGTGGTAGTTTTCTTCTTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 72 bp TCTTCTGGGACTCCCGTTAGGTATACATTGGCACACTaGAGGGTGTCTCACAGGTATCTGAAGATCTATTCA +
Preference number: 6 (lower is better)
Translates to: SSGTPVRYTLAH*RVSHRYLKIYS
Trigger: TGAATAGATCTTCAGATACCTGTGAGACACCCTCAAGTGTGCCAATGTATACCTAACGGGAGTCCCAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp GCATGGCTTCTGATGAGAAATCTGCTGTTAATCCTATaGGGGATCCCTTGTCTGCTTTGCTCTCACTGCTTT +
Preference number: 6 (lower is better)
Translates to: AWLLMRNLLLIL*GIPCLLCSHCF
Trigger: AAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAGATTTCTCATCAGAAGCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp ACACAGGACTTACAGAAGAAGAAAACTACCACATACTCACGGGCATaGCTGAGGGCACAAACTGCAGTTTGTTTGTGGCAGAACTTTTCA +
Preference number: 6 (lower is better)
Translates to: TQDLQKKKTTTYSRA*LRAQTAVCLWQNFS
Trigger: TGAAAAGTTCTGCCACAAACAAACTGCAGTTTGTGCCCTCAGCAATGCCCGTGAGTATGTGGTAGTTTTCTTCTTCTGTAAGTCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS CAA 90 bp TCTCTCCTGTCTTCTGGGACTCCCGTTAGGTATACATTGGCACACTaGAGGGTGTCTCACAGGTATCTGAAGATCTATTCATTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: SLLSSGTPVRYTLAH*RVSHRYLKIYSFFF
Trigger: GAAGAAAAATGAATAGATCTTCAGATACCTGTGAGACACCCTCAAGTGTGCCAATGTATACCTAACGGGAGTCCCAGAAGACAGGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp ATCCCTTGTCTGCTTTGCTCTCACTGCTTTCAAGATTCTGTGTCTTaGGCTTTTGACAGTTTGGCTATGACACGCCTTGGTGTGAAACTT +
Preference number: 6 (lower is better)
Translates to: IPCLLCSHCFQDSVS*AFDSLAMTRLGVKL
Trigger: AAGTTTCACACCAAGGCGTGTCATAGCCAAACTGTCAAAAGCCAAAGACACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp ATGGCTTCTGATGAGAAATCTGCTGTTAATCCTATTGGGGATCCCTaGTCTGCTTTGCTCTCACTGCTTTCAAGATTCTGTGTCTTTGGC +
Preference number: 6 (lower is better)
Translates to: MASDEKSAVNPIGDP*SALLSLLSRFCVFG
Trigger: GCCAAAGACACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAGATTTCTCATCAGAAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp TTCTGGCTTGCATGGCTTCTGATGAGAAATCTGCTGTTAATCCTATaGGGGATCCCTTGTCTGCTTTGCTCTCACTGCTTTCAAGATTCT +
Preference number: 6 (lower is better)
Translates to: FWLAWLLMRNLLLIL*GIPCLLCSHCFQDS
Trigger: AGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAGATTTCTCATCAGAAGCCATGCAAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS TCA 72 bp ATACTAGAGGAAAAACTAGAGGTCACTAGAGGAAACTaGAGCCTCTGGGACCTAGAGTTACAGCAAACATGC +
Preference number: 6 (lower is better)
Translates to: ILEEKLEVTRGN*SLWDLELQQTC
Trigger: GCATGTTTGCTGTAACTCTAGGTCCCAGAGGCTTCAGTTTCCTCTAGTGACCTCTAGTTTTTCCTCTAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp ATCCTATTGGGGATCCCTTGTCTGCTTTGCTCTCACTaGTTTCAAGATTCTGTGTCTTTGGCTTTTGACAGT +
Preference number: 6 (lower is better)
Translates to: ILLGIPCLLCSH*FQDSVSLAFDS
Trigger: ACTGTCAAAAGCCAAAGACACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CCA 72 bp TCACATGGAAGAAGACAGAAGGGCAAGCTAACTGAATaGCTGCATGACACCTCTTTTATTAGGGCCTTAATC +
Preference number: 6 (lower is better)
Translates to: SHGRRQKGKLTE*LHDTSFIRALI
Trigger: GATTAAGGCCCTAATAAAAGAGGTGTCATGCAGCCATTCAGTTAGCTTGCCCTTCTGTCTTCTTCCATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CCA 72 bp CTCAAGGACAGCTTCTATTGGTTGCTTGTTTTTCCCTaGGTATGGGCCATACTTTCTAGTTTTGCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: LKDSFYWLLVFP*VWAILSSFALC
Trigger: ACACAGAGCAAAACTAGAAAGTATGGCCCATACCCAGGGAAAAACAAGCAACCAATAGAAGCTGTCCTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp TTTGCAGAGGGGCTGTGTGAGTTTGGGGGCATGTATTaGATGCTTCAACAGGCAATTTATGACTTTGCCTTA +
Preference number: 6 (lower is better)
Translates to: FAEGLCEFGGMY*MLQQAIYDFAL
Trigger: TAAGGCAAAGTCATAAATTGCCTGTTGAAGCATCAAATACATGCCCCCAAACTCACACAGCCCCTCTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS GCA 72 bp GCTGACTCGGAGGGAGTTTTTAATTTTGGCTTTACCTaGTTCTCCGTAAGATTTCATGACTTGTTAGCCACT +
Preference number: 6 (lower is better)
Translates to: ADSEGVFNFGFT*FSVRFHDLLAT
Trigger: AGTGGCTAACAAGTCATGAAATCTTACGGAGAAGCAGGTAAAGCCAAAATTAAAAACTCCCTCCGAGTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474298.5
ENST00000489999.1
CDS CCA 72 bp GTCCAAGATATTAACTTCCTCAAGGACAGCTTCTATTaGTTGCTTGTTTTTCCCTGGGTATGGGCCATACTT +
Preference number: 6 (lower is better)
Translates to: VQDINFLKDSFY*LLVFPWVWAIL
Trigger: AAGTATGGCCCATACCCAGGGAAAAACAAGCAACCAATAGAAGCTGTCCTTGAGGAAGTTAATATCTTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp GATGAGAAATCTGCTGTTAATCCTATTGGGGATCCCTaGTCTGCTTTGCTCTCACTGCTTTCAAGATTCTGT +
Preference number: 6 (lower is better)
Translates to: DEKSAVNPIGDP*SALLSLLSRFC
Trigger: ACAGAATCTTGAAAGCAGTGAGAGCAAAGCAGACAAGGGATCCCCAATAGGATTAACAGCAGATTTCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp TGCTGGATGTGGAAATGTTTGTTGACAGTCTTTTATTTCAGCATTTaGAGTATGTCTCCCATAGCCTTCTGGCTTGCATGGCTTCTGATG +
Preference number: 6 (lower is better)
Translates to: CWMWKCLLTVFYFSI*SMSPIAFWLAWLLM
Trigger: CATCAGAAGCCATGCAAGCCAGAAGGCTATGGGAGACATACTCAAAATGCTGAAATAAAAGACTGTCAACAAACATTTCCACATCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CCA 72 bp TATTTCAGCATTTTGAGTATGTCTCCCATAGCCTTCTaGCTTGCATGGCTTCTGATGAGAAATCTGCTGTTA +
Preference number: 6 (lower is better)
Translates to: YFSILSMSPIAF*LAWLLMRNLLL
Trigger: TAACAGCAGATTTCTCATCAGAAGCCATGCAAGCCAGAAGGCTATGGGAGACATACTCAAAATGCTGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp CAAGATATTAACTTCCTCAAGGACAGCTTCTATTGGTaGCTTGTTTTTCCCTGGGTATGGGCCATACTTTCT +
Preference number: 6 (lower is better)
Translates to: QDINFLKDSFYW*LVFPWVWAILS
Trigger: AGAAAGTATGGCCCATACCCAGGGAAAAACAAGCAACCAATAGAAGCTGTCCTTGAGGAAGTTAATATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 90 bp AAGTCCAAGATATTAACTTCCTCAAGGACAGCTTCTATTGGTTGCTaGTTTTTCCCTGGGTATGGGCCATACTTTCTAGTTTTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: KSKILTSSRTASIGC*FFPGYGPYFLVLLC
Trigger: ACAGAGCAAAACTAGAAAGTATGGCCCATACCCAGGGAAAAACAAGCAACCAATAGAAGCTGTCCTTGAGGAAGTTAATATCTTGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS GCA 72 bp GACCTAGAGTTACAGCAAACATGCCTTAGTCTGTGTTaGTGTTACAAAATACCACAGACTGGGTCATTTATA +
Preference number: 6 (lower is better)
Translates to: DLELQQTCLSLC*CYKIPQTGSFI
Trigger: TATAAATGACCCAGTCTGTGGTATTTTGTAACAGCAACACAGACTAAGGCATGTTTGCTGTAACTCTAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS GCA 72 bp AAGATATTAACTTCCTCAAGGACAGCTTCTATTGGTTaGTTGTTTTTCCCTGGGTATGGGCCATACTTTCTA +
Preference number: 6 (lower is better)
Translates to: KILTSSRTASIG*LFFPGYGPYFL
Trigger: TAGAAAGTATGGCCCATACCCAGGGAAAAACAAGCAACCAATAGAAGCTGTCCTTGAGGAAGTTAATATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp TGCTTTCAAGATTCTGTGTCTTTGGCTTTTGACAGTTaGGCTATGACACGCCTTGGTGTGAAACTTTTTGAT +
Preference number: 6 (lower is better)
Translates to: CFQDSVSLAFDS*AMTRLGVKLFD
Trigger: ATCAAAAAGTTTCACACCAAGGCGTGTCATAGCCAAACTGTCAAAAGCCAAAGACACAGAATCTTGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CAA 72 bp TGGAAATGTTTGTTGACAGTCTTTTATTTCAGCATTTaGAGTATGTCTCCCATAGCCTTCTGGCTTGCATGG +
Preference number: 6 (lower is better)
Translates to: WKCLLTVFYFSI*SMSPIAFWLAW
Trigger: CCATGCAAGCCAGAAGGCTATGGGAGACATACTCAAAATGCTGAAATAAAAGACTGTCAACAAACATTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS TCA 72 bp ATTCAGCTCACATGCAACAGATTTCTCCTTCGTTTTTaGTTTTTGCTGGATGTGGAAATGTTTGTTGACAGT +
Preference number: 6 (lower is better)
Translates to: IQLTCNRFLLRF*FLLDVEMFVDS
Trigger: ACTGTCAACAAACATTTCCACATCCAGCAAAAATCAAAAACGAAGGAGAAATCTGTTGCATGTGAGCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495990.5
CDS CCA 72 bp AATGCTGCCATGAACATCTGTGTACAAATTTTCGTGTaGACATATGTTTTCAATTCTCCTAGGCATATATCT +
Preference number: 6 (lower is better)
Translates to: NAAMNICVQIFV*TYVFNSPRHIS
Trigger: AGATATATGCCTAGGAGAATTGAAAACATATGTCCACACGAAAATTTGTACACAGATGTTCATGGCAGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 72 bp TATGTTTTCAATTCTCCTAGGCATATATCTGGAAGTTaGAATGCTGAATCAAATGGTAGCCCCATGTTTAAT +
Preference number: 6 (lower is better)
Translates to: YVFNSPRHISGS*NAESNGSPMFN
Trigger: ATTAAACATGGGGCTACCATTTGATTCAGCATTTCAACTTCCAGATATATGCCTAGGAGAATTGAAAACATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479944.5
CDS TCA 72 bp GTGTGTATATATCACCTTTTATTTATCCATGTCAGTTaGTGGATAGTTGGATTGGTTCCACTTTTTGGCTAT +
Preference number: 6 (lower is better)
Translates to: VCIYHLLFIHVS*WIVGLVPLFGY
Trigger: ATAGCCAAAAAGTGGAACCAATCCAACTATCCATCAACTGACATGGATAAATAAAAGGTGATATATACACAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479944.5