RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRABD (Homo sapiens)

Ensembl gene IDs: ENSG00000170638

Ensembl transcript IDs: ENST00000303434.8, ENST00000380909.9, ENST00000395827.5, ENST00000395829.1, ENST00000463233.1, ENST00000472677.1

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCT +
Preference number: 1 (lower is better)
Translates to: APGPTLLWPEHRKAQ*GRDSGHCPPPATRA
Trigger: AGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR GCA 90 bp CCACAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTTCGCTCCGGG +
Preference number: 1 (lower is better)
Translates to: PQPMSLAFHIGAHIV*PERAKMPQAPLRSG
Trigger: CCCGGAGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
3UTR GCA 90 bp GGGACAGGCCTGGCCACAGCCCATGTCCTTGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACC +
Preference number: 1 (lower is better)
Translates to: GTGLATAHVLGLPHR*THCLPREGQDAPGT
Trigger: GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGGCCAGGCCTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
3UTR-3UTR CCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCTGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAATGCCAGGGGCACGGTaGGGTCGGCTGGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPMPGAR*GRLELQ
Trigger: CTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCAT...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCATTTCCCAGTCTCGCCTaGCCTGGAGCCCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPFPSLA*PGAPRS
Trigger: GCTCCTGGGGGCTCCAGGGCAGGCGAGACTGGGAAA...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACTGCCCCCTCGGAGCTaGGTGTCTTGTCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKALPPRS*VSCPEA
Trigger: AGCTTCTGGACAAGACACCCAGCTCCGAGGGGGCAG...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGTGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR GCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCTCGGGCGGGCTAGGATaGACCTGGCACCCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSSGGLG*TWHPEV
Trigger: CACTTCTGGGTGCCAGGTGCATCCTAGCCCGCCCGA...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR TCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGCCTGCCACCAGGGCTaGGAGGGCAGCGCACGCCTC +
Preference number: 2 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPACHQG*EGSARL
Trigger: GAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGCAGGC...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGCTGCCCCCTCGGAGCTaGGTGTCTTGTCCAGAAGCT +
Preference number: 2 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQLPPRS*VSCPEA
Trigger: AGCTTCTGGACAAGACACCCAGCTCCGAGGGGGCAG...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCAGTCTCGCCTGCCCTaGAGCCCCCAGGAGCCGCCC +
Preference number: 2 (lower is better)
Translates to: WLHASPLGTDPRTRILSLQSRLP*SPQEPP
Trigger: GGGCGGCTCCTGGGGGCTCCAGGGCAGGCGAGACTG...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: WLHASPLGTDPRTRILSLWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAATGCCAGGGGCACGGTaGGGTCGGCTGGAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPMPGAR*GRLELQ
Trigger: CTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCAT...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTGGGCCGACGCTCCTGTaGCCGGAGCACAGGAAGGCA +
Preference number: 2 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSGPTLL*PEHRKA
Trigger: TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCC...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR TCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTHRKAQ*GRDSGH
Trigger: ATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR GCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCTCGGGCGGGCTAGGATaGACCTGGCACCCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPSGGLG*TWHPEV
Trigger: CACTTCTGGGTGCCAGGTGCATCCTAGCCCGCCCGA...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR CCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCACCCAGAGCTGATGTTTaGCTGCACGCGAGCCCACTC +
Preference number: 2 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPPRADV*LHASPL
Trigger: GAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
3UTR-3UTR TCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCACACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPHRKAQ*GRDSGH
Trigger: ATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTG...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCAAAACACAGAATCCCTaGAGGCAGACGGTGCCAGGG +
Preference number: 2 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLKTQNP*RQTVPG
Trigger: CCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTT...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR TCA 72 bp CCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCC +
Preference number: 3 (lower is better)
Translates to: PTLLWPEHRKAQ*GRDSGHCPPPA
Trigger: GGCAGGCGGGGGACAATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
3UTR CCA 72 bp AACACCGAGTCGGCACAGACACAACCAGAGATGGCCTaGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: NTESAQTQPEMA*VQAGAARAVSW
Trigger: CCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGTTGTGTCTGTGCCGACTCGGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
3UTR GCA 72 bp CTGAGGCCACGCCTGGACCCAGAGCTGATGTTTGGCTaGACGCGAGCCCACTCGGGACAGACCCAAGAACAC +
Preference number: 3 (lower is better)
Translates to: LRPRLDPELMFG*TRAHSGQTQEH
Trigger: GTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGCGTGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
3UTR TCA 72 bp ATCCCCGAGTGTGGCAGGAAGGACACAGCCGGCTCCTaGCGCACACCTGATTTGATTCAACACCGAGTCGGC +
Preference number: 3 (lower is better)
Translates to: IPECGRKDTAGS*RTPDLIQHRVG
Trigger: GCCGACTCGGTGTTGAATCAAATCAGGTGTGCGTCAGGAGCCGGCTGTGTCCTTCCTGCCACACTCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
3UTR GCA 72 bp CTGGCCACAGCCCATGTCCTTGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGAGAGGGCCAAGATGCC +
Preference number: 3 (lower is better)
Translates to: LATAHVLGLPHR*THCLPREGQDA
Trigger: GGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
3UTR GCA 72 bp ATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTT +
Preference number: 3 (lower is better)
Translates to: MSLAFHIGAHIV*PERAKMPQAPL
Trigger: AAGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRLPVHG*AAASCT
Trigger: GGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAG...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGLPVHG*AAASCT
Trigger: GGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAG...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGACACAGGCTCCCAGCTaGGGCCACGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRTQAPS*GHAWTQ
Trigger: CTGGGTCCAGGCGTGGCCTCAGCTGGGAGCCTGTGT...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGGPGSR*GGPSST
Trigger: TGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCC...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGGTTGGCCTCGTGCGGTaGCTGCTGCTCCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRVGLVR*LLLLPV
Trigger: GACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAAC...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGATGCCAGGGGCACGGTaGGGTCGGCTGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRMPGAR*GRLELQ
Trigger: CTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCAT...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRRAPRR*CGAGLG
Trigger: TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCG...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGGGCCCCAAGCCAGCCTaGCCTTCTGCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRGPKPA*PSARRR
Trigger: TCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCC...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCGCCTGCCACCAGGGCTaGGAGGGCAGCGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCACHQG*EGSARL
Trigger: GAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGCAGGC...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGGCAGTCTCCTACTTGTaGCGGGCCTCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRAVSYL*RASVTL
Trigger: GAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGC...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCCCTCCTATAAGCCCCTaGCCCCTCGGAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGPPISP*PLGAGC
Trigger: ACACCCAGCTCCGAGGGGGCAGGGGCTTATAGGAGG...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCAGAGAGGGCCAAGATaGCCCAGGCACCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRQRGPR*PRHPFA
Trigger: AGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTG...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAGGCTTCCTGCACCTGTaGGGAGCGCGCCGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPGFLHL*GARRPR
Trigger: GCGCGGACGGCGCGCTCCCCACAGGTGCAGGAAGCC...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303434.8
CDS-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCAGTTGGCCTCGTGCGGTaGCTGCTGCTCCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKAVGLVR*LLLLPV
Trigger: GACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAAC...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCCAGTGCGCGGCAGGTTaGGCCGCTGACGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPQCAAG*AADAAA
Trigger: AGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTG...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCATCGATGCCAGGCACGTaGCCCATGCCCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKASMPGT*PMPTTP
Trigger: GGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGA...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCTCTTGCTGTCGTCGCTaGAGTGGGCTGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGSCCRR*SGLSPP
Trigger: TGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGA...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACCAACTGGGTCACAGTaGGCGGCAGGTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKAPTGSQ*AAGWAA
Trigger: AGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGG...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGACCACCACGTCAGGCTaGACCTCCCGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRTTTSG*TSRMVF
Trigger: GAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGT...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCCCTCCCGCAGCAGCGTaGTCTCGTCCATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGPPAAA*SRPSSA
Trigger: TGCTGAAGATGGACGAGAGCACGCTGCTGCGGGAGG...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCTCCAGAAAGCACCCTaGGCACCGGCTCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRLQKAP*APALKP
Trigger: AGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAG...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCGCCTCGTGCGGTGGCTaGTGCTCCTCCCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPASCGG*CSSPSM
Trigger: CATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGC...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCATCGGGCGGGCTAGGATaGACCTGGCACCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKASGGLG*TWHPEV
Trigger: CACTTCTGGGTGCCAGGTGCATCCTAGCCCGCCCGA...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCCAGTGCGCGGCAGGTTaGGCCGCTGACGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSQCAAG*AADAAA
Trigger: AGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTG...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAGGGCCGACGCTCCTGTaGCCGGAGCACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPGPTLL*PEHRKA
Trigger: TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCC...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAGGCTTCCTGCACCTGTaGGGAGCCGAGGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPGFLHL*GAEARQ
Trigger: CTGCCTCGCCTCGGCTCCCCACAGGTGCAGGAAGCC...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380909.9
CDS-3UTR TCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAGCATCAGCCCCGACATaGGCCCGTTCTGCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPASAPT*ARSASR
Trigger: CCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGC...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCTCGTGCGGTGGCTGCTaGTCCTCCCCGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCSCGGC*SSPSMA
Trigger: AGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGA...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCATCCACGTTGGCCTCGTaGGGTGGCTGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPSTLAS*GGCCSS
Trigger: GGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGA...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGTTCAGCAGCAGCATCTaGATCAGCCCCGACATGAGC +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRFSSSI*ISPDMS
Trigger: GCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAA...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCTGCTCGGTGATGTGTaGAGACACCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRLLGDV*RHLQQQ
Trigger: CTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAG...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTTTCCCAGTCTCGCCTaGCCTGGAGCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPFPSLA*PGAPRS
Trigger: GCTCCTGGGGGCTCCAGGGCAGGCGAGACTGGGAAA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGGAHIV*PERAKM
Trigger: CATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACC...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACTGTCGTCGCTGAAGTaGGCTGTCCCCACCACGTAC +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKALSSLK*AVPTTY
Trigger: GTACGTGGTGGGGACAGCCCACTTCAGCGACGACAG...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCTGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCAGTCTCGCCTGCCCTaGAGCCCCCAGGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQQSRLP*SPQEPP
Trigger: GGGCGGCTCCTGGGGGCTCCAGGGCAGGCGAGACTG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGCAGGCACGTGGCCCATaGCCACGACGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQQARGP*PRRPRP
Trigger: TGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTG...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGTGGGCGGCGGCTTCCTaGACCTGTGGGGAGCACACG +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQWAAAS*TCGEHT
Trigger: CGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCA...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCAACGTCGGACAGGTTCTaGGGGTCTCCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKATSDRF*GSPEST
Trigger: GGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGT...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTCCTCAGCCACCAACTaGGTCACAGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPSSATN*VTVRGR
Trigger: CCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCAGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKAGRSPR*NLQKGT
Trigger: GGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACC...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGAGGGGACGCACTTCCTaGGCTCGGCGTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQRGRTS*ARRQRP
Trigger: GGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCT...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCGGGCCGACGCTCCTGTaGCCGGAGCACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSGPTLL*PEHRKA
Trigger: TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCC...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCTCTCCAGGAGCAGGTTaGAGGCGTCCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCSPGAG*RRPRRT
Trigger: TGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGA...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTCTCCAGGAGCAGGTTaGAGGCGTCCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPSPGAG*RRPRRT
Trigger: TGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGGCATCAGCCCCGACATaGGCCCGTTCTGCCTCACGG +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQASAPT*ARSASR
Trigger: CCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGC...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCAGACACAGCCGGCTCCTaGCGCACACCTGATTTGATT +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKADTAGS*RTPDLI
Trigger: AATCAAATCAGGTGTGCGTCAGGAGCCGGCTGTGTC...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR TCA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGTCAGTTTCTAAGGAATaGATCCCCGAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRSVSKE*IPECGR
Trigger: CCTGCCACACTCGGGGATTCATTCCTTAGAAACTGA...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCACCTCCCGCAGCAGCGTaGTCTCGTCCATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPPPAAA*SRPSSA
Trigger: TGCTGAAGATGGACGAGAGCACGCTGCTGCGGGAGG...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACACCCAGGTGGAACTTaGAGAAAGGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKAHPGGT*RKAPCW
Trigger: CCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGCAGGCACGTGGCCCATaGCCACGACGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGQARGP*PRRPRP
Trigger: TGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTG...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQLCRQY*AAGSDR
Trigger: CCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCTCCAGAAAGCACCCTaGGCACCGGCTCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCLQKAP*APALKP
Trigger: AGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAG...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGAGGGGACGCACTTCCTaGGCTCGGCGTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGRGRTS*ARRQRP
Trigger: GGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCT...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGAGGGGACGCACTTCCTaGGCTCGGCGTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQRGRTS*ARRQRP
Trigger: GGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCT...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGTCGATGCCAGGCACGTaGCCCATGCCCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGSMPGT*PMPTTP
Trigger: GGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGA...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCTGCCCCCTCGGAGCTaGGTGTCTTGTCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCLPPRS*VSCPEA
Trigger: AGCTTCTGGACAAGACACCCAGCTCCGAGGGGGCAG...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCGGCCCCAAGCCAGCCTaGCCTTCTGCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSGPKPA*PSARRR
Trigger: TCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCC...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCACACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPHRKAQ*GRDSGH
Trigger: ATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTG...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGGCCTGGACCCAGAGCTaGTGTTTGGCTGCACGCGAG +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQAWTQS*CLAARE
Trigger: CTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGC...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACTCAGCCGGCCTCCATaGGGCGCGGGCCCTCAACGG +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQELSRPP*GAGPQR
Trigger: CCGTTGAGGGCCCGCGCCGCATGGAGGCCGGCTGAG...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR GCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCCAACTGGGTCACAGTaGGCGGCAGGTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQPTGSQ*AAGWAA
Trigger: AGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGCCACCACGTACACCCTaGTCCCGTCCTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQPPRTP*SRPQPP
Trigger: TGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGG...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGGGGGCCATGCCCAGCTaGTCGGTGATGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQGAMPS*SVMCAD
Trigger: GTCTGCACACATCACCGAGCAGCTGGGCATGGCCCC...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTCCAGTTCTTCTCGATaGCAGGCACGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPSSSSR*QARGPC
Trigger: GCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCATCCAGTTCTTCTCGATaGCAGGCACGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPSSSSR*QARGPC
Trigger: GCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGA...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGTTTCCCAGTCTCGCCTaGCCTGGAGCCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGFPSLA*PGAPRS
Trigger: GCTCCTGGGGGCTCCAGGGCAGGCGAGACTGGGAAA...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAGTGCGCGGCAGGTTaGGCCGCTGACGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQEQCAAG*AADAAA
Trigger: AGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTG...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCGCTGCACCTCCCGGATaGTCTTCACAACGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPAAPPG*SSQRPS
Trigger: AGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACAGTCTCGCCTGCCCTaGAGCCCCCAGGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTQSRLP*SPQEPP
Trigger: GGGCGGCTCCTGGGGGCTCCAGGGCAGGCGAGACTG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCCAACCAGAGATGGCCTaGGTCCAGGCTGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSQPEMA*VQAGAA
Trigger: TGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGTTG...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCTGCTCGGTGATGTGTaGAGACACCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCLLGDV*RHLQQQ
Trigger: CTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAG...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGGAGACGATGGTGCGGTaGAGGTCTGGGAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQETMVR*RSGNSP
Trigger: TGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTC...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCAAAACACAGAATCCCTaGAGGCAGACGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCKTQNP*RQTVPG
Trigger: CCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTT...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCAGAGAGGGCCAAGATaGCCCAGGCACCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQQRGPR*PRHPFA
Trigger: AGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: TRAERAAHASAPPISPCPGAHIV*PERAKM
Trigger: CATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACC...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: ATRAERAAHASAPPISPCGAHIV*PERAKM
Trigger: CATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACC...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCACAGTTTTTCTCTTTGTaGCGGGCCTCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPQFFSL*RASVTL
Trigger: GAGGGTGACCGAGGCCCGGCACAAAGAGAAAAACTG...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS-3UTR CCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCCTGTCGTCGCTGAAGTaGGCTGTCCCCACCACGTAC +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSLSSLK*AVPTTY
Trigger: GTACGTGGTGGGGACAGCCCACTTCAGCGACGACAG...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCTGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGTCTCCAGGAGCAGGTTaGAGGCGTCCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQSPGAG*RRPRRT
Trigger: TGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGA...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGGCAGGTTGGGCCGCTaGCGCCGCCGCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPGRLGR*RRRFSF
Trigger: GAAGCTGAAGCGGCGGCGTCAGCGGCCCAACCTGCC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGTCTTGCTGTCGTCGCTaGAGTGGGCTGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGSCCRR*SGLSPP
Trigger: TGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGA...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGCCTGCCACCAGGGCTaGGAGGGCAGCGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLACHQG*EGSARL
Trigger: GAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGCAGGC...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGCACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQHRKAQ*GRDSGH
Trigger: ATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTG...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGACCACCACGTCAGGCTaGACCTCCCGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQTTTSG*TSRMVF
Trigger: GAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGT...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGTTCTGCCTCACGGCCTaGTGCAGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGFCLTA*CSFSRL
Trigger: CAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAA...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAGTAGGTCCTTCTGCTTaGAGCGTTCCACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPVGPSA*SVPRHP
Trigger: AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTAC...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCATCCAGTAGGTCCTTCTaGTTGCAGCGTTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPSSRSF*LQRSTS
Trigger: TGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGA...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTGPGSR*GGPSST
Trigger: TGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCC...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPLCRQY*AAGSDR
Trigger: CCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAG...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQELCRQY*AAGSDR
Trigger: CCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAG...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPASVTL*RQYCAA
Trigger: CGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGC...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLLPVHG*AAASCT
Trigger: GGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAG...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGCAGTGCGCGGCAGGTTaGGCCGCTGACGCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERQCAAG*AADAAA
Trigger: AGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTG...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAATGGACACACGATATTaGCAGAGCTCCACGACCACC +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPMDTRY*QSSTTT
Trigger: GGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCAT...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCTCCAGGCTGAGCTCCTaGGCCTCCCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTSRLSS*ASRSSV
Trigger: CACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGA...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAATGCCAGGGGCACGGTaGGGTCGGCTGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQEMPGAR*GRLELQ
Trigger: CTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCAT...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGCCTGCCACCAGGGCTaGGAGGGCAGCGCACGCCTC +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQACHQG*EGSARL
Trigger: GAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGCAGGC...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGCCTCGTGCGGTGGCTaGTGCTCCTCCCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPASCGG*CSSPSM
Trigger: CATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGCCTCGTGCGGTGGCTaGTGCTCCTCCCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPASCGG*CSSPSM
Trigger: CATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGC...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTGCCTCGTGCGGTGGCTaGTGCTCCTCCCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLASCGG*CSSPSM
Trigger: CATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGC...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTTCCACGTTGGCCTCGTaGGGTGGCTGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPSTLAS*GGCCSS
Trigger: GGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGA...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAATCCACGTTGGCCTCGTaGGGTGGCTGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQESTLAS*GGCCSS
Trigger: GGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGA...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCAACTGGGTCACAGTaGGCGGCAGGTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTPTGSQ*AAGWAA
Trigger: AGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTCAGGCACGTGGCCCATaGCCACGACGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPQARGP*PRRPRP
Trigger: TGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTG...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCCAACCGAGACACTCTaGCGGAGACGGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLPTETL*RRRTAG
Trigger: CCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGG...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCACCAACCGAGACACTCTaGCGGAGACGGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPPTETL*RRRTAG
Trigger: CCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGG...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLGPGSR*GGPSST
Trigger: TGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCC...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPGPGSR*GGPSST
Trigger: TGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCC...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPASVTL*RQYCAA
Trigger: CGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLASVTL*RQYCAA
Trigger: CGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGC...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCCAGGCTGAGCTCCTaGGCCTCCCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPSRLSS*ASRSSV
Trigger: CACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGA...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTPELAT*GHAQLL
Trigger: GAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQGRSPR*NLQKGT
Trigger: GGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACC...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCACACAGGCTCCCAGCTaGGGCCACGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPTQAPS*GHAWTQ
Trigger: CTGGGTCCAGGCGTGGCCTCAGCTGGGAGCCTGTGT...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCGACGCACACCTGATTTaGTTCAACACCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSDAHLI*FNTESA
Trigger: TGCCGACTCGGTGTTGAATCAAATCAGGTGTGCGTC...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCCAACTGGGTCACAGTaGGCGGCAGGTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLPTGSQ*AAGWAA
Trigger: AGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGG...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAGCCAGCCTGACCTTCTaGCAGAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTASLTF*QKESAA
Trigger: CGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGC...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCAACCGAGACACTCTaGCGGAGACGGACGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLPTETL*RRRTAG
Trigger: CCCCGCCGTCCGTCTCCGGCAGAGTGTCTCGGTTGG...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLASVTL*RQYCAA
Trigger: CGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGC...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTCCTATAAGCCCCTaGCCCCTCGGAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTPPISP*PLGAGC
Trigger: ACACCCAGCTCCGAGGGGGCAGGGGCTTATAGGAGG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACAGAGAGGGCCAAGATaGCCCAGGCACCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTQRGPR*PRHPFA
Trigger: AGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCGTTGGCCTCGTGCGGTaGCTGCTGCTCCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPVGLVR*LLLLPV
Trigger: GACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAAC...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCACGTCCATCTTCAGCATaGACACACGATATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPRPSSA*THDIGR
Trigger: TCTGCCAATATCGTGTGTCCATGCTGAAGATGGACG...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAATGGGGGAGGGGTGACTaGCCCAGGAGGGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQWGRGD*PRRAGE
Trigger: CTCGCCTGCCCTCCTGGGCCAGTCACCCCTCCCCCA...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACATCTCCAGGAGCAGGTTaGAGGCGTCCACGTCGGACA +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTSPGAG*RRPRRT
Trigger: TGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGA...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAACACAGGCTCCCAGCTaGGGCCACGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQTQAPS*GHAWTQ
Trigger: CTGGGTCCAGGCGTGGCCTCAGCTGGGAGCCTGTGT...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGGACGCACACCTGATTTaGTTCAACACCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGDAHLI*FNTESA
Trigger: TGCCGACTCGGTGTTGAATCAAATCAGGTGTGCGTC...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR TCA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCCTCCTGACGCACACCTaGTTTGATTCAACACCGAGT +
Preference number: 4 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSLLTHT*FDSTPS
Trigger: ACTCGGTGTTGAATCAAATCAGGTGTGCGTCAGGAG...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCTCAGCCGGCCTCCATaGGGCGCGGGCCCTCAACGG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKALSRPP*GAGPQR
Trigger: CCGTTGAGGGCCCGCGCCGCATGGAGGCCGGCTGAG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTCCACGTTGGCCTCGTaGGGTGGCTGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLSTLAS*GGCCSS
Trigger: GGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGA...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTCCACCACGTACACCCTaGTCCCGTCCTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPPPRTP*SRPQPP
Trigger: TGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGG...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAACCACCACGTCAGGCTaGACCTCCCGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQETTTSG*TSRMVF
Trigger: GAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGT...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACCTCCCGCAGCAGCGTaGTCTCGTCCATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTPPAAA*SRPSSA
Trigger: TGCTGAAGATGGACGAGAGCACGCTGCTGCGGGAGG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTCCCGCAGCAGCGTaGTCTCGTCCATCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTPPAAA*SRPSSA
Trigger: TGCTGAAGATGGACGAGAGCACGCTGCTGCGGGAGG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAATTCTGCCTCACGGCCTaGTGCAGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQEFCLTA*CSFSRL
Trigger: CAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAA...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGGGGCCATGCCCAGCTaGTCGGTGATGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPGAMPS*SVMCAD
Trigger: GTCTGCACACATCACCGAGCAGCTGGGCATGGCCCC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGCCAGCCTGACCTTCTaGCAGAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPASLTF*QKESAA
Trigger: CGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGC...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATCAGGCACGTGGCCCATaGCCACGACGCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDQARGP*PRRPRP
Trigger: TGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTG...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGCAGTCTCCTACTTGTaGCGGGCCTCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPAVSYL*RASVTL
Trigger: GAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGGLPHR*THCLPR
Trigger: TCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGTTGGCCTCGTGCGGTaGCTGCTGCTCCTCCCCGTC +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDVGLVR*LLLLPV
Trigger: GACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAAC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCATCCTCAGCCACCAACTaGGTCACAGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPSSATN*VTVRGR
Trigger: CCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGA...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTCCTCAGCCACCAACTaGGTCACAGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLSSATN*VTVRGR
Trigger: CCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGA...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTCTGTCGTCGCTGAAGTaGGCTGTCCCCACCACGTAC +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPLSSLK*AVPTTY
Trigger: GTACGTGGTGGGGACAGCCCACTTCAGCGACGACAG...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAATCCAGGCTGAGCTCCTaGGCCTCCCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQSRLSS*ASRSSV
Trigger: CACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGA...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATAGGGGACGCACTTCCTaGGCTCGGCGTCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDRGRTS*ARRQRP
Trigger: GGGCCTCTGACGCCGAGCCCAGGAAGTGCGTCCCCT...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCAGTCTCGCCTGCCCTaGAGCCCCCAGGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAQSRLP*SPQEPP
Trigger: GGGCGGCTCCTGGGGGCTCCAGGGCAGGCGAGACTG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACCCAGAGCTGATGTTTaGCTGCACGCGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTPRADV*LHASPL
Trigger: GAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCTTGCTGTCGTCGCTaGAGTGGGCTGTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPSCCRR*SGLSPP
Trigger: TGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGA...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCATCAGCCCCGACATaGGCCCGTTCTGCCTCACGG +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDASAPT*ARSASR
Trigger: CCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGGCCCCAAGCCAGCCTaGCCTTCTGCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERGPKPA*PSARRR
Trigger: TCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCC...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGCCTGGACCCAGAGCTaGTGTTTGGCTGCACGCGAG +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLAWTQS*CLAARE
Trigger: CTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGC...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCGCCTGGACCCAGAGCTaGTGTTTGGCTGCACGCGAG +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPAWTQS*CLAARE
Trigger: CTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGC...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAATCGTGCGGTGGCTGCTaGTCCTCCCCGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQSCGGC*SSPSMA
Trigger: AGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGA...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAACCACCACGTCAGGCTaGACCTCCCGGATGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPTTTSG*TSRMVF
Trigger: GAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGT...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTTCCAGTTCTTCTCGATaGCAGGCACGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPSSSSR*QARGPC
Trigger: GCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGA...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGCAGTCTCCTACTTGTaGCGGGCCTCGGTCACCCTC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLAVSYL*RASVTL
Trigger: GAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGC...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGTCGGGCGGGCTAGGATaGACCTGGCACCCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERSGGLG*TWHPEV
Trigger: CACTTCTGGGTGCCAGGTGCATCCTAGCCCGCCCGA...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCCTCCTATAAGCCCCTaGCCCCTCGGAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPPPISP*PLGAGC
Trigger: ACACCCAGCTCCGAGGGGGCAGGGGCTTATAGGAGG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTGAGCTGATGTTTGGCTaGACGCGAGCCCACTCGGGA +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLELMFG*TRAHSG
Trigger: TCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTC...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCAGAGAGGGCCAAGATaGCCCAGGCACCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLQRGPR*PRHPFA
Trigger: AGCGAAGGGGTGCCTGGGGCATCTTGGCCCTCTCTG...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTGGGCGGCGGCTTCCTaGACCTGTGGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAWAAAS*TCGEPR
Trigger: CCTCGGCTCCCCACAGGTGCAGGAAGCCGCCGCCCA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380909.9
CDS-3UTR CCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSPELAT*GHAQLL
Trigger: GAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGG...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAGGTGCGGTGCAGGTCTaGGAACTCGCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQEGAVQV*ELANHL
Trigger: GAGATGATTGGCGAGTTCCCAGACCTGCACCGCACC...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTGGTGCGGTGCAGGTCTaGGAACTCGCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPGAVQV*ELANHL
Trigger: GAGATGATTGGCGAGTTCCCAGACCTGCACCGCACC...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAACGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQRAPRR*CGAGLG
Trigger: TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCG...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSRAPRR*CGAGLG
Trigger: TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCG...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCCCAGAGCTGATGTTTaGCTGCACGCGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLPRADV*LHASPL
Trigger: GAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCAACCAGAGATGGCCTaGGTCCAGGCTGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLQPEMA*VQAGAA
Trigger: TGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGTTG...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR TCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGGCCCCAAGCCAGCCTaGCCTTCTGCCAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDGPKPA*PSARRR
Trigger: TCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAGACACAGCCGGCTCCTaGCGCACACCTGATTTGATT +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTDTAGS*RTPDLI
Trigger: AATCAAATCAGGTGTGCGTCAGGAGCCGGCTGTGTC...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAACCACCACGTACACCCTaGTCCCGTCCTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQPPRTP*SRPQPP
Trigger: TGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGG...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCTTCTGCCTCACGGCCTaGTGCAGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPFCLTA*CSFSRL
Trigger: CAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAA...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGGGGCCATGCCCAGCTaGTCGGTGATGTGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQGAMPS*SVMCAD
Trigger: GTCTGCACACATCACCGAGCAGCTGGGCATGGCCCC...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCACCCAGGTGGAACTTaGAGAAAGGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTHPGGT*RKAPCW
Trigger: CCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTCCAGAAGGAGAGCGCTaGGATGGCCCTCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPPEGER*DGPLEG
Trigger: ACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGG...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGCCAGCCTGACCTTCTaGCAGAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQASLTF*QKESAA
Trigger: CGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGC...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCGAGACGATGGTGCGGTaGAGGTCTGGGAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLETMVR*RSGNSP
Trigger: TGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTC...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCGAGACGATGGTGCGGTaGAGGTCTGGGAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPETMVR*RSGNSP
Trigger: TGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTC...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKALCRQY*AAGSDR
Trigger: CCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAAAAACACAGAATCCCTaGAGGCAGACGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTKTQNP*RQTVPG
Trigger: CCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTT...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCAAAACACAGAATCCCTaGAGGCAGACGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTKTQNP*RQTVPG
Trigger: CCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTTT...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGAGCTGATGTTTGGCTaGACGCGAGCCCACTCGGGA +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERELMFG*TRAHSG
Trigger: TCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTC...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTGGTGCACACATTGTCTaGCCAGAGAGGGCCAAGATG +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPGAHIV*PERAKM
Trigger: CATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACC...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTACGTCGGACAGGTTCTaGGGGTCTCCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLTSDRF*GSPEST
Trigger: GGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGT...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTTCCTCAGCCACCAACTaGGTCACAGTGCGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSSSATN*VTVRGR
Trigger: CCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGGA...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGCTGCACCTCCCGGATaGTCTTCACAACGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPAAPPG*SSQRPS
Trigger: AGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTCCAGGCTGAGCTCCTaGGCCTCCCGCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKASRLSS*ASRSSV
Trigger: CACGCTGCTGCGGGAGGCCCAGGAGCTCAGCCTGGA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPGRSPR*NLQKGT
Trigger: GGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTCGATGCCAGGCACGTaGCCCATGCCCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKASMPGT*PMPTTP
Trigger: GGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCCCAGAGCTGATGTTTaGCTGCACGCGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPPRADV*LHASPL
Trigger: GAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGGCTTCCTGCACCTGTaGGGAGCACACGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQGFLHL*GAHGSP
Trigger: CGGACTTCCGTGTGCTCCCCACAGGTGCAGGAAGCC...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS-3UTR TCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCACAGGAAGGCACAGTaGGGTAGGGACAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPHRKAQ*GRDSGH
Trigger: ATGGCCACTGTCCCTACCTCACTGTGCCTTCCTGTG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAGACGCACACCTGATTTaGTTCAACACCGAGTCGGCA +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTDAHLI*FNTESA
Trigger: TGCCGACTCGGTGTTGAATCAAATCAGGTGTGCGTC...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTTCAGCAGCAGCATCTaGATCAGCCCCGACATGAGC +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLFSSSI*ISPDMS
Trigger: GCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAA...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCCAGAAGGAGAGCGCTaGGATGGCCCTCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPPEGER*DGPLEG
Trigger: ACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTCCAGTTCTTCTCGATaGCAGGCACGTGGCCCATGC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLSSSSR*QARGPC
Trigger: GCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGA...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGAGCTGATGTTTGGCTaGACGCGAGCCCACTCGGGA +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDELMFG*TRAHSG
Trigger: TCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPGLPHR*THCLPR
Trigger: TCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFLPVHG*AAASCT
Trigger: GGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAG...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAACTCCAGAAAGCACCCTaGGCACCGGCTCTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQLQKAP*APALKP
Trigger: AGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAG...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAATGGACACACGATATTaGCAGAGCTCCACGACCACC +
Preference number: 4 (lower is better)
Translates to: DPELMFGCTRAHSGQTQEMDTRY*QSSTTT
Trigger: GGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCAT...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAPELAT*GHAQLL
Trigger: GAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGGTGCGGTGCAGGTCTaGGAACTCGCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERGAVQV*ELANHL
Trigger: GAGATGATTGGCGAGTTCCCAGACCTGCACCGCACC...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACAACGGTCATGATCTCCTaGATGTTGAGGTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTTVMIS*MLRSVL
Trigger: GAGCACCGACCTCAACATCCAGGAGATCATGACCGT...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAACTGCCCCCTCGGAGCTaGGTGTCTTGTCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQLPPRS*VSCPEA
Trigger: AGCTTCTGGACAAGACACCCAGCTCCGAGGGGGCAG...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATCCCAGAGCTGATGTTTaGCTGCACGCGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDPRADV*LHASPL
Trigger: GAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGCCTGGACCCAGAGCTaGTGTTTGGCTGCACGCGAG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAAWTQS*CLAARE
Trigger: CTCGCGTGCAGCCAAACATCAGCTCTGGGTCCAGGC...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTACACAGGCTCCCAGCTaGGGCCACGCCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFTQAPS*GHAWTQ
Trigger: CTGGGTCCAGGCGTGGCCTCAGCTGGGAGCCTGTGT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCCTCTCCTGACGCACACCTaGTTTGATTCAACACCGAGT +
Preference number: 4 (lower is better)
Translates to: HRCTHCLPREGQDAPGTPLLTHT*FDSTPS
Trigger: ACTCGGTGTTGAATCAAATCAGGTGTGCGTCAGGAG...AGGGGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCCACCACGTACACCCTaGTCCCGTCCTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAPPRTP*SRPQPP
Trigger: TGGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTTCAGCAGCAGCATCTaGATCAGCCCCGACATGAGC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLFSSSI*ISPDMS
Trigger: GCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAA...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCACCCAGGTGGAACTTaGAGAAAGGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLHPGGT*RKAPCW
Trigger: CCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGTAGGTCCTTCTGCTTaGAGCGTTCCACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPVGPSA*SVPRHP
Trigger: AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTAC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTCCAGTAGGTCCTTCTaGTTGCAGCGTTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPSSRSF*LQRSTS
Trigger: TGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGA...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCATCCAGTAGGTCCTTCTaGTTGCAGCGTTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPSSRSF*LQRSTS
Trigger: TGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGA...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPISAII*SSRSFC
Trigger: GCAGAAGGACCTACTGGAGCAGATGATGGCCGAGAT...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: WLHASPLGTDPRTRILSLISAII*SSRSFC
Trigger: GCAGAAGGACCTACTGGAGCAGATGATGGCCGAGAT...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPGLPHR*THCLPR
Trigger: TCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAACGTCGGACAGGTTCTaGGGGTCTCCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQTSDRF*GSPEST
Trigger: GGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGT...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACC +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDGRSPR*NLQKGT
Trigger: GGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTGGTGCGGTGCAGGTCTaGGAACTCGCCAATCATCTC +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSGAVQV*ELANHL
Trigger: GAGATGATTGGCGAGTTCCCAGACCTGCACCGCACC...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTTCGATGCCAGGCACGTaGCCCATGCCCACGACGCCC +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFSMPGT*PMPTTP
Trigger: GGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGA...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTACGGTCATGATCTCCTaGATGTTGAGGTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPTVMIS*MLRSVL
Trigger: GAGCACCGACCTCAACATCCAGGAGATCATGACCGT...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAACGGTCATGATCTCCTaGATGTTGAGGTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPTVMIS*MLRSVL
Trigger: GAGCACCGACCTCAACATCCAGGAGATCATGACCGT...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTGGGCCGACGCTCCTGTaGCCGGAGCACAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFGPTLL*PEHRKA
Trigger: TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCC...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTATGCCAGGGGCACGGTaGGGTCGGCTGGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFMPGAR*GRLELQ
Trigger: CTGGAGCTCCAGCCGACCCCACCGTGCCCCTGGCAT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR TCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTGCATCAGCCCCGACATaGGCCCGTTCTGCCTCACGG +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFASAPT*ARSASR
Trigger: CCGTGAGGCAGAACGGGCTCATGTCGGGGCTGATGC...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGACACAGCCGGCTCCTaGCGCACACCTGATTTGATT +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQDTAGS*RTPDLI
Trigger: AATCAAATCAGGTGTGCGTCAGGAGCCGGCTGTGTC...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTTCGTGCGGTGGCTGCTaGTCCTCCCCGTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFSCGGC*SSPSMA
Trigger: AGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGA...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTTCTGCCTCACGGCCTaGTGCAGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAFCLTA*CSFSRL
Trigger: CAGCCTGGAGAAGCTGCAGCAGGCCGTGAGGCAGAA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATCTGCTCGGTGATGTGTaGAGACACCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDLLGDV*RHLQQQ
Trigger: CTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAG...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATCACCCAGGTGGAACTTaGAGAAAGGCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDHPGGT*RKAPCW
Trigger: CCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTG...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGTAGGTCCTTCTGCTTaGAGCGTTCCACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERVGPSA*SVPRHP
Trigger: AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTAC...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLISAII*SSRSFC
Trigger: GCAGAAGGACCTACTGGAGCAGATGATGGCCGAGAT...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGAGCTGATGTTTGGCTaGACGCGAGCCCACTCGGGA +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAELMFG*TRAHSG
Trigger: TCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTC...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCATGGACACACGATATTaGCAGAGCTCCACGACCACC +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPMDTRY*QSSTTT
Trigger: GGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCAT...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGTCCATCTTCAGCATaGACACACGATATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRADVWLHASPLGTDPRTRPSSA*THDIGR
Trigger: TCTGCCAATATCGTGTGTCCATGCTGAAGATGGACG...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTCCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFPELAT*GHAQLL
Trigger: GAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGG...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTCGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFRAPRR*CGAGLG
Trigger: TCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCG...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTCAGTTTCTAAGGAATaGATCCCCGAGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLSVSKE*IPECGR
Trigger: CCTGCCACACTCGGGGATTCATTCCTTAGAAACTGA...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000380909.9
CDS-3UTR GCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTGCCAGCCTGACCTTCTaGCAGAAGGAGAGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFASLTF*QKESAA
Trigger: CGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGC...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTGTAGGTCCTTCTGCTTaGAGCGTTCCACGTCATCCT +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSVGPSA*SVPRHP
Trigger: AGGATGACGTGGAACGCTGCAAGCAGAAGGACCTAC...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGGCCTTCCACATAGGTaGACACATTGTCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDGLPHR*THCLPR
Trigger: TCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGCTGCACCTCCCGGATaGTCTTCACAACGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAAAPPG*SSQRPS
Trigger: AGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCACGTCCATCTTCAGCATaGACACACGATATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPRPSSA*THDIGR
Trigger: TCTGCCAATATCGTGTGTCCATGCTGAAGATGGACG...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAACGGTCATGATCTCCTaGATGTTGAGGTCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQTVMIS*MLRSVL
Trigger: GAGCACCGACCTCAACATCCAGGAGATCATGACCGT...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR TCA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTCCTGACGCACACCTaGTTTGATTCAACACCGAGT +
Preference number: 4 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSLLTHT*FDSTPS
Trigger: ACTCGGTGTTGAATCAAATCAGGTGTGCGTCAGGAG...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTTCAGCAGCAGCATCTaGATCAGCCCCGACATGAGC +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAFSSSI*ISPDMS
Trigger: GCTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTCTGCTCGGTGATGTGTaGAGACACCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKALLGDV*RHLQQQ
Trigger: CTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAG...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTGAGACGATGGTGCGGTaGAGGTCTGGGAACTCGCCA +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFETMVR*RSGNSP
Trigger: TGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTC...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCGTCCATCTTCAGCATaGACACACGATATTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPRPSSA*THDIGR
Trigger: TCTGCCAATATCGTGTGTCCATGCTGAAGATGGACG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTCTGCCCCCTCGGAGCTaGGTGTCTTGTCCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFLPPRS*VSCPEA
Trigger: AGCTTCTGGACAAGACACCCAGCTCCGAGGGGGCAG...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR GCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTCCAGAAGGAGAGCGCTaGGATGGCCCTCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFPEGER*DGPLEG
Trigger: ACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGG...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR GCA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKAISAII*SSRSFC
Trigger: GCAGAAGGACCTACTGGAGCAGATGATGGCCGAGAT...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTACGTCGGACAGGTTCTaGGGGTCTCCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFTSDRF*GSPEST
Trigger: GGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTGCTGCACCTCCCGGATaGTCTTCACAACGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFAAPPG*SSQRPS
Trigger: AGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGC...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CCA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTATGGACACACGATATTaGCAGAGCTCCACGACCACC +
Preference number: 4 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFMDTRY*QSSTTT
Trigger: GGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCAT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS CCA 90 bp CACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCGCGCCGTCCGCGCC +
Preference number: 5 (lower is better)
Translates to: HVGLVRWLLLLPVHG*AAASCTCGERAVRA
Trigger: GGCGCGGACGGCGCGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000463233.1
CDS GCA 90 bp GGTCAGTACCTGCTCGGGCCTCAGCCTCACAGGGGGTCCCACGCCTaGGGGCGGCCGTCACCGTCAGAGGCCCGAGGCAGCTCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GQYLLGPQPHRGSHA*GRPSPSEARGSSRR
Trigger: GCGCCTCGAGCTGCCTCGGGCCTCTGACGGTGACGGCCGCCCGCAGGCGTGGGACCCCCTGTGAGGCTGAGGCCCGAGCAGGTACTGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463233.1
ENST00000472677.1
CDS GCA 90 bp GTCTCCTACTTGTGCCGGGCCTCGGTCACCCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGGACCAGGCTCGCGGTGCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: VSYLCRASVTLCRQY*AAGSDRTRLAVRRP
Trigger: GGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS GCA 90 bp TGGCTCCTCAGGGGCCCGAGCGGGCGGGGAGCAGTCTCCTACTTGTaGCGGGCCTCGGTCACCCTCTGCAGGCAGTACTGCGCGGCGGGC +
Preference number: 5 (lower is better)
Translates to: WLLRGPSGRGAVSYL*RASVTLCRQYCAAG
Trigger: GCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCTGAGGAGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS CCA 90 bp GTTCCACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATaGCTGGGCGGCGGCTTCCTGCACCTGTGGGGAGCGCGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: VPRWPRAVAAAPPRP*LGGGFLHLWGARRP
Trigger: CGGACGGCGCGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000463233.1
CDS CCA 90 bp CACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCCGAGGCGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: HVGLVRWLLLLPVHG*AAASCTCGEPRRGS
Trigger: GCTGCCTCGCCTCGGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380909.9
CDS-3UTR CAA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGACAACAGGTTCCACGTaGGCCTCGTGCGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRTTGST*ASCGGC
Trigger: GCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGT...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS GCA 90 bp GGGCGGGGAGCAGTCTCCTACTTGTGCCGGGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCGGGCAGCGACAGGACCAGGCTCGCG +
Preference number: 5 (lower is better)
Translates to: GRGAVSYLCRASVTL*RQYCAAGSDRTRLA
Trigger: CGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS CCA 90 bp GTTCCACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATaGCTGGGCGGCGGCTTCCTGCACCTGTGGGGAGCCGAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: VPRWPRAVAAAPPRP*LGGGFLHLWGAEAR
Trigger: CCTCGCCTCGGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380909.9
CDS GCA 90 bp GCAGGCAGTACTGCGCGGCGGGCAGCGACAGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACAGGCTGTAGCCCAGCAGGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: AGSTARRAATGPGSR*GGPSSTGCSPAGRR
Trigger: TCTTCGGCCTGCTGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 90 bp CACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCACACGGAAGTCCGG +
Preference number: 5 (lower is better)
Translates to: HVGLVRWLLLLPVHG*AAASCTCGEHTEVR
Trigger: CCGGACTTCCGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS GCA 90 bp TTTTTCTCTTTGTGCCGGGCCTCGGTCACCCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGGACCAGGCTCGCGGTGCGGCGGCCC +
Preference number: 5 (lower is better)
Translates to: FFSLCRASVTLCRQY*AAGSDRTRLAVRRP
Trigger: GGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAAGAGAAAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS CCA 90 bp GCCTTGAGTGAGGATTGGCTGCGCTTGGACCTGCACAGGAGGGCCTaGAGCCTCCCACAGACCACCCTGCAGGCCGGCCAGGGTCCCGGG +
Preference number: 5 (lower is better)
Translates to: ALSEDWLRLDLHRRA*SLPQTTLQAGQGPG
Trigger: CCCGGGACCCTGGCCGGCCTGCAGGGTGGTCTGTGGGAGGCTCCAGGCCCTCCTGTGCAGGTCCAAGCGCAGCCAATCCTCACTCAAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS-3UTR CAA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCAACCTTGCTGGCCTCCTaGAAGGCCTCCCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKATLLAS*KASLNS
Trigger: CGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGT...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp GAGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGAGTAGGTCCTTCTGCTaGCAGCGTTCCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: EGGPAHRRPPGRGPERDRSRSFC*QRSTSS
Trigger: GGATGACGTGGAACGCTGCAAGCAGAAGGACCTACT...CCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp AGGGAGGCCCCGCACACAGACGGCCGCCGGGCAGGGGGCCTGAGCGGGACAGGCCTTCAGTTTTTCTCTTaGTGCCGGGCCTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: REAPHTDGRRAGGLSGTGLQFFS*CRASVT
Trigger: GGTGACCGAGGCCCGGCACAAAGAGAAAAACTGAAG...GCCTGTCCCGCTCAGGCCCCCTGCCCGGCGGCCGTCTGTGTGCGGGGCCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS GCA 90 bp GGGAATGGCAGAACTGGGATGGCAGGCAGCACCAGCGCAGAGCCCTaGCCCAGCCCAGTGCTGTGTCCTTGGCCCCCTCCCCGACAGGTG +
Preference number: 5 (lower is better)
Translates to: GNGRTGMAGSTSAEP*PSPVLCPWPPPRQV
Trigger: CACCTGTCGGGGAGGGGGCCAAGGACACAGCACTGGGCTGGGGCAGGGCTCTGCGCTGGTGCTGCCTGCCATCCCAGTTCTGCCATTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CCA 90 bp GTTCCACGTTGGCCTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATaGCTGGGCGGCGGCTTCCTGCACCTGTGGGGAGCACACGGAAGT +
Preference number: 5 (lower is better)
Translates to: VPRWPRAVAAAPPRP*LGGGFLHLWGAHGS
Trigger: ACTTCCGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS CCA 90 bp CGACGCCCACGACCACGGAGGGGACGCACTTCCTGGGCTCGGCTGTaGGGAAGGACAAGGGGTCAGTACCTGCTCGGGCCTCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: RRPRPRRGRTSWARL*GRTRGQYLLGPQPH
Trigger: GTGAGGCTGAGGCCCGAGCAGGTACTGACCCCTTGTCCTTCCCCACAGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTCGTGGGCGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463233.1
ENST00000472677.1
CDS-3UTR CAA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCACAACAGGTTCCACGTaGGCCTCGTGCGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: ATRAERAAHASAPPISPCTTGST*ASCGGC
Trigger: GCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGT...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCACAACAGGTTCCACGTaGGCCTCGTGCGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TRAERAAHASAPPISPCPTTGST*ASCGGC
Trigger: GCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGT...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCACCACAGCCCATGTCCTaGGCCTTCCACATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKAPQPMS*AFHIGA
Trigger: TGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGG...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp CCCCCAGGAGCCGCCCCTGGGCCGACGCTCCTGTGGCCGGAGCACAGGAAGGCATCACCCAGGTGGAACTaGCAGAAAGGCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPGAAPGPTLLWPEHRKASPRWN*QKGTLL
Trigger: CAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGA...TGCCTTCCTGTGCTCCGGCCACAGGAGCGTCGGCCCAGGGGCGGCTCCTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCGGAGCAGTCTCCTACTaGTGCCGGGCCTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSGAVSY*CRASVT
Trigger: GGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCC...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTCGGAGCTGGGTGTCTaGTCCAGAAGCTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: TRAERAAHASAPPISPCPSELGV*SRSWGT
Trigger: CGTTCCCCAGCTTCTGGACAAGACACCCAGCTCCGA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGGGAGCAGTCTCCTACTaGTGCCGGGCCTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGGAVSY*CRASVT
Trigger: GGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCC...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS GCA 90 bp GCACAGGCCCCAAGCCAGCCTGACCTTCTGCCAGAAGGAGAGCGCTaGGATGGCCCTCTTGAAGGTGACGGGGATGGGTCGGTCACCCAG +
Preference number: 5 (lower is better)
Translates to: AQAPSQPDLLPEGER*DGPLEGDGDGSVTQ
Trigger: CTGGGTGACCGACCCATCCCCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGGGGCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS-3UTR CAA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCATCTCCAGGAGCAGGTaGAAGGCGTCCACGTCGGAC +
Preference number: 5 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSISRSR*KASTSD
Trigger: GTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGAT...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCTTCACAACGTCCCTCTaGCTGTCGTCGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: TRAERAAHASAPPISPCPFTTSL*LSSLKW
Trigger: CCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAA...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp ACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCCCCCATGGACACACGATATaGGCAGAGCTCCACGACCAC +
Preference number: 5 (lower is better)
Translates to: TRAERAAHASAPPISPCPHGHTI*AELHDH
Trigger: GTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATG...GGGGCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAAGTAGGTCCTTCTGCTaGCAGCGTTCCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPSRSFC*QRSTSS
Trigger: GGATGACGTGGAACGCTGCAAGCAGAAGGACCTACT...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS GCA 90 bp TGTGTCCTTGGCCCCCTCCCCGACAGGTGCAGGACCACCCTAGCGTaGAGAGGGTCAGACCAGAGCAGGGAGTTCTGTCCCAACAGGCAC +
Preference number: 5 (lower is better)
Translates to: CVLGPLPDRCRTTLA*RGSDQSREFCPNRH
Trigger: GTGCCTGTTGGGACAGAACTCCCTGCTCTGGTCTGACCCTCTGCACGCTAGGGTGGTCCTGCACCTGTCGGGGAGGGGGCCAAGGACACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CCA 90 bp TGGATGTTGAGGTCGGTGCTCCAGTTCTTCTCGATGCCAGGCACGTaGCCCATGCCCACGACGCCCACGACCACGGAGGGGACGCACTTC +
Preference number: 5 (lower is better)
Translates to: WMLRSVLQFFSMPGT*PMPTTPTTTEGTHF
Trigger: GAAGTGCGTCCCCTCCGTGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS-3UTR CAA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGCGTTCCACGTCATCCTaGCTGATGGGGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQRSTSS*LMGSDR
Trigger: CCTGTCAGACCCCATCAGCAAGGATGACGTGGAACG...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp GCCACCAGGGCTGAGAGGGCAGCGCACGCCTCGGCCCCTCCTATAAGCCCCTGCATGATCTCCTGGATGTaGAGGTCGGTGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ATRAERAAHASAPPISPCMISWM*RSVLQF
Trigger: GAACTGGAGCACCGACCTCAACATCCAGGAGATCAT...GCAGGGGCTTATAGGAGGGGCCGAGGCGTGCGCTGCCCTCTCAGCCCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS TCA 90 bp GCACCTCCCGGATGGTCTTCACAACGTCCCTCTTGCTGTCGTCGCTaGAGTGGGCTGTCCCCACCACGTACACCCTGCTCCCGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: APPGWSSQRPSCCRR*SGLSPPRTPCSRPQ
Trigger: CTGAGGACGGGAGCAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 90 bp AGGCGTCCACGTCGGACAGGTTCTGGGGGTCTCCAGAAAGCACCCTaGGCACCGGCTCTGAAGCCTCTGACGGCACAACAGGTTCCACGT +
Preference number: 5 (lower is better)
Translates to: RRPRRTGSGGLQKAP*APALKPLTAQQVPR
Trigger: ACGTGGAACCTGTTGTGCCGTCAGAGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACGTGGACGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 90 bp TCCCGGATGGTCTTCACAACGTCCCTCTTGCTGTCGTCGCTGAAGTaGGCTGTCCCCACCACGTACACCCTGCTCCCGTCCTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SRMVFTTSLLLSSLK*AVPTTYTLLPSSAT
Trigger: GGTGGCTGAGGACGGGAGCAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS-3UTR CAA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGTTGCAGAAAGGCACCTaGCTGGCCTCCTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGLQKGT*LASLKA
Trigger: GGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAA...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp ACCAGAGATGGCCTGGGTCCAGGCTGGGGCTGCACGGGCTGTGTCCTGGACAGCTCACCCAGGTGGAACTaGCAGAAAGGCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TRDGLGPGWGCTGCVLDSSPRWN*QKGTLL
Trigger: CAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGA...GCTGTCCAGGACACAGCCCGTGCAGCCCCAGCCTGGACCCAGGCCATCTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCGTTCCACGTCATCCTaGCTGATGGGGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQRSTSS*LMGSDR
Trigger: CCTGTCAGACCCCATCAGCAAGGATGACGTGGAACG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS GCA 90 bp CCTGAACTCGCCACCTGGGGCCATGCCCAGCTGCTCGGTGATGTGTaGAGACACCTTCAGCAGCAGCATCTGCATCAGCCCCGACATGAG +
Preference number: 5 (lower is better)
Translates to: PELATWGHAQLLGDV*RHLQQQHLHQPRHE
Trigger: CTCATGTCGGGGCTGATGCAGATGCTGCTGCTGAAGGTGTCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS GCA 90 bp CATTTACTTCAGTTTTTCTCTTTGTGCCGGGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCGGGCAGCGACAGGACCAGGCTCGCG +
Preference number: 5 (lower is better)
Translates to: HLLQFFSLCRASVTL*RQYCAAGSDRTRLA
Trigger: CGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAAGAGAAAAACTGAAGTAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS CCA 90 bp GCGATGGCCCTCTTGAAGGTGACGGGGATGGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACCTTGCTGGCCTCCTTGAAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: AMALLKVTGMGRSPR*NLQKGTLLASLKAS
Trigger: GGAGGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAGAGGGCCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS-3UTR CAA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGCATGGACACACGATATaGGCAGAGCTCCACGACCAC +
Preference number: 5 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGHGHTI*AELHDH
Trigger: GTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATG...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp AAACACAGAATCCCTGCAGGCAGACGGTGCCAGGGAGGTGGCGGCCAGGGCCAGCATGGACACACGATATaGGCAGAGCTCCACGACCAC +
Preference number: 5 (lower is better)
Translates to: KHRIPAGRRCQGGGGQGQHGHTI*AELHDH
Trigger: GTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATG...CTGGCCCTGGCCGCCACCTCCCTGGCACCGTCTGCCTGCAGGGATTCTGTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS CCA 90 bp CCTGGCGCAGCATGTAGGTTAGGTAGACGTCGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGAACTCGCCAATCATCTCGGCCATCA +
Preference number: 5 (lower is better)
Translates to: PGAACRLGRRRAPRR*CGAGLGTRQSSRPS
Trigger: TGATGGCCGAGATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGCTGCGCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS-3UTR CAA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAACAACAGGTTCCACGTaGGCCTCGTGCGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPTTGST*ASCGGC
Trigger: GCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGT...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAACCTTGCTGGCCTCCTaGAAGGCCTCCCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: DPELMFGCTRAHSGQTQETLLAS*KASLNS
Trigger: CGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGT...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GGAGCTGGGTGTCTTGTCCAGAAGCTGGGGAACGGCCCCTGCAGTGTGGGAGGGATGATCTCCTGGATGTaGAGGTCGGTGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: GAGCLVQKLGNGPCSVGGMISWM*RSVLQF
Trigger: GAACTGGAGCACCGACCTCAACATCCAGGAGATCAT...CCCTCCCACACTGCAGGGGCCGTTCCCCAGCTTCTGGACAAGACACCCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCCGTTCCACGTCATCCTaGCTGATGGGGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTRSTSS*LMGSDR
Trigger: CCTGTCAGACCCCATCAGCAAGGATGACGTGGAACG...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTCGGAGCTGGGTGTCTaGTCCAGAAGCTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: WLHASPLGTDPRTRILSLSELGV*SRSWGT
Trigger: CGTTCCCCAGCTTCTGGACAAGACACCCAGCTCCGA...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp CCCAGGCACCCCTTCGCTCCGGGGGCTCAGGACACAGGCTCCCAGCTGAGGCCAACGAATTCTCTCCCTTaGGATTTAAGGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PRHPFAPGAQDTGSQLRPTNSLP*DLRLVF
Trigger: AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGT...TGGCCTCAGCTGGGAGCCTGTGTCCTGAGCCCCCGGAGCGAAGGGGTGCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS TCA 90 bp CGTTTGTTTGGGATTTGTGGCGGAAGGAAAGGGCAGGGAAGGCCTTaGGTGAGGATTGGCTGCGCTTGGACCTGCACAGGAGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: RLFGICGGRKGQGRP*VRIGCAWTCTGGPG
Trigger: TCCAGGCCCTCCTGTGCAGGTCCAAGCGCAGCCAATCCTCACTCAAGGCCTTCCCTGCCCTTTCCTTCCGCCACAAATCCCAAACAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS-3UTR CAA 90 bp CCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACATTCACAACGTCCCTCTaGCTGTCGTCGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: PRADVWLHASPLGTDPRTFTTSL*LSSLKW
Trigger: CCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAA...TGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCACCTTGCTGGCCTCCTaGAAGGCCTCCCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPTLLAS*KASLNS
Trigger: CGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGT...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGCAGAAAGGCACCTaGCTGGCCTCCTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPLQKGT*LASLKA
Trigger: GGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAA...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCATTGCAGAAAGGCACCTaGCTGGCCTCCTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GLPHRCTHCLPREGQDAPLQKGT*LASLKA
Trigger: GGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAA...TGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GACCCAGAGCTGATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAAAGTAGGTCCTTCTGCTaGCAGCGTTCCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: DPELMFGCTRAHSGQTQESRSFC*QRSTSS
Trigger: GGATGACGTGGAACGCTGCAAGCAGAAGGACCTACT...TTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACATCAGCTCTGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTCCACAGCCCATGTCCTaGGCCTTCCACATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LAAREPTRDRPKNTNSLPPQPMS*AFHIGA
Trigger: TGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGG...AGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS GCA 90 bp GTGCGGTGCAGGTCTGGGAACTCGCCAATCATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGCTTGCAGCGTTCCACGTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: VRCRSGNSPIISAII*SSRSFCLQRSTSSL
Trigger: CAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGTTCCCAGACCTGCACCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS-3UTR CAA 90 bp TGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTTCACAACGTCCCTCTaGCTGTCGTCGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: WLHASPLGTDPRTRILSLFTTSL*LSSLKW
Trigger: CCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAA...AAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp CCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCAGGCACCATGATCTCCTGGATGTaGAGGTCGGTGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: PHRCTHCLPREGQDAPGTMISWM*RSVLQF
Trigger: GAACTGGAGCACCGACCTCAACATCCAGGAGATCAT...GGTGCCTGGGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATTCGGAGCTGGGTGTCTaGTCCAGAAGCTGGGGAACG +
Preference number: 5 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDSELGV*SRSWGT
Trigger: CGTTCCCCAGCTTCTGGACAAGACACCCAGCTCCGA...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp GAGGTAGGGACAGTGGCCATTGTCCCCCGCCTGCCACCAGGGCTGAGAGGGCAGACGAATTCTCTCCCTTaGGATTTAAGGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: EVGTVAIVPRLPPGLRGQTNSLP*DLRLVF
Trigger: AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGT...CTGCCCTCTCAGCCCTGGTGGCAGGCGGGGGACAATGGCCACTGTCCCTACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
CDS-3UTR CAA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCACAGCCCATGTCCTaGGCCTTCCACATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLPQPMS*AFHIGA
Trigger: TGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGG...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCCACAGCCCATGTCCTaGGCCTTCCACATAGGTGCA +
Preference number: 5 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPPQPMS*AFHIGA
Trigger: TGCACCTATGTGGAAGGCCAAGGACATGGGCTGTGG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATGCCCCATGGACACACGATATaGGCAGAGCTCCACGACCAC +
Preference number: 5 (lower is better)
Translates to: LAFHIGAHIVCPERAKMPHGHTI*AELHDH
Trigger: GTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATG...GGGCATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp CAGCCCATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGTCACCCAGGTGGAACTaGCAGAAAGGCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QPMSLAFHIGAHIVCPERSPRWN*QKGTLL
Trigger: CAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGA...CCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCTCACCCAGGTGGAACTaGCAGAAAGGCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLSPRWN*QKGTLL
Trigger: CAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGA...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAAGATCGTTCCACGTCATCCTaGCTGATGGGGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: VLGLPHRCTHCLPREGQDRSTSS*LMGSDR
Trigger: CCTGTCAGACCCCATCAGCAAGGATGACGTGGAACG...ATCTTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCAGTAGGTCCTTCTGCTaGCAGCGTTCCACGTCATCC +
Preference number: 5 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLSRSFC*QRSTSS
Trigger: GGATGACGTGGAACGCTGCAAGCAGAAGGACCTACT...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS GCA 90 bp AACTCGCCAATCATCTCGGCCATCATCTGCTCCAGTAGGTCCTTCTaGTTGCAGCGTTCCACGTCATCCTTGCTGATGGGGTCTGACAGG +
Preference number: 5 (lower is better)
Translates to: NSPIISAIICSSRSF*LQRSTSSLLMGSDR
Trigger: CCTGTCAGACCCCATCAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 90 bp AACTCGCCAATCATCTCGGCCATCATCTGCTCCAGTAGGTCCTTCTaGTTGCAGCGTTCCACGTCATCCTTGCTGTGGAGAGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: NSPIISAIICSSRSF*LQRSTSSLLWRGMA
Trigger: AGCCATCCCTCTCCACAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS-3UTR CAA 90 bp CATGTCCTTGGCCTTCCACATAGGTGCACACATTGTCTGCCCAGAGAGGGCCAATTCACAACGTCCCTCTaGCTGTCGTCGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: HVLGLPHRCTHCLPREGQFTTSL*LSSLKW
Trigger: CCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAA...TTGGCCCTCTCTGGGCAGACAATGTGTGCACCTATGTGGAAGGCCAAGGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp GCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTTTGCAGAAAGGCACCTaGCTGGCCTCCTTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: AHSGQTQEHEFSPFGFKALQKGT*LASLKA
Trigger: GGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAA...AGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTACCTTGCTGGCCTCCTaGAAGGCCTCCCTGAACTCG +
Preference number: 5 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFTLLAS*KASLNS
Trigger: CGAGTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp TGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTCACGAATTCTCTCCCTTaGGATTTAAGGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: CLAAREPTRDRPKNTNSLTNSLP*DLRLVF
Trigger: AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGT...GAGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp CGGGACAGACCCAAGAACACGAATTCTCTCCCTTTGGATTTAAGGCTGGTGTTTATGATCTCCTGGATGTaGAGGTCGGTGCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RDRPKNTNSLPLDLRLVFMISWM*RSVLQF
Trigger: GAACTGGAGCACCGACCTCAACATCCAGGAGATCAT...AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGTGTTCTTGGGTCTGTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS-3UTR CAA 90 bp ATGTTTGGCTGCACGCGAGCCCACTCGGGACAGACCCAAGAACACGAATTCTCTACGAATTCTCTCCCTTaGGATTTAAGGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: MFGCTRAHSGQTQEHEFSTNSLP*DLRLVF
Trigger: AAACACCAGCCTTAAATCCAAAGGGAGAGAATTCGT...AGAGAATTCGTGTTCTTGGGTCTGTCCCGAGTGGGCTCGCGTGCAGCCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
CDS GCA 72 bp CTGCTCGGGCCTCAGCCTCACAGGGGGTCCCACGCCTaGGGGCGGCCGTCACCGTCAGAGGCCCGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLGPQPHRGSHA*GRPSPSEARGS
Trigger: GCTGCCTCGGGCCTCTGACGGTGACGGCCGCCCGCAGGCGTGGGACCCCCTGTGAGGCTGAGGCCCGAGCAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCGCGCC +
Preference number: 6 (lower is better)
Translates to: LVRWLLLLPVHG*AAASCTCGERA
Trigger: GGCGCGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303434.8
ENST00000463233.1
CDS CCA 72 bp CTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: LVRWLLLLPVHG*AAASCTCGEPR
Trigger: CCTCGGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380909.9
CDS CAA 90 bp CACTGGCTCCTCAGGGGCCCGAGCGGGCGGGGAGCAGTCTCCTACTaGTGCCGGGCCTCGGTCACCCTCTGCAGGCAGTACTGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: HWLLRGPSGRGAVSY*CRASVTLCRQYCAA
Trigger: CGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCTGAGGAGCCAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS GCA 72 bp ACTGCGCGGCGGGCAGCGACAGGACCAGGCTCGCGGTaGGGCGGCCCATCCAGTACAGGCTGTAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: TARRAATGPGSR*GGPSSTGCSPA
Trigger: TGCTGGGCTACAGCCTGTACTGGATGGGCCGCCGCACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS GCA 72 bp TTGTGCCGGGCCTCGGTCACCCTCTGCAGGCAGTACTaGGCGGCGGGCAGCGACAGGACCAGGCTCGCGGTG +
Preference number: 6 (lower is better)
Translates to: LCRASVTLCRQY*AAGSDRTRLAV
Trigger: CACCGCGAGCCTGGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LVRWLLLLPVHG*AAASCTCGEPE
Trigger: CTCAGGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS CCA 72 bp CTCGTGCGGTGGCTGCTGCTCCTCCCCGTCCATGGCTaGGCGGCGGCTTCCTGCACCTGTGGGGAGCACACG +
Preference number: 6 (lower is better)
Translates to: LVRWLLLLPVHG*AAASCTCGEHT
Trigger: CGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS GCA 72 bp AGGGGCCCGAGCGGGCGGGGAGCAGTCTCCTACTTGTaGCGGGCCTCGGTCACCCTCTGCAGGCAGTACTGC +
Preference number: 6 (lower is better)
Translates to: RGPSGRGAVSYL*RASVTLCRQYC
Trigger: GCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS CAA 72 bp CTCAGGGGCCCGAGCGGGCGGGGAGCAGTCTCCTACTaGTGCCGGGCCTCGGTCACCCTCTGCAGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: LRGPSGRGAVSY*CRASVTLCRQY
Trigger: GTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGCTCCCCGCCCGCTCGGGCCCCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS GCA 72 bp GCAGTCTCCTACTTGTGCCGGGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCGGGCAGCGACAGGACC +
Preference number: 6 (lower is better)
Translates to: AVSYLCRASVTL*RQYCAAGSDRT
Trigger: GGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAGTAGGAGACTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp GAGGATTGGCTGCGCTTGGACCTGCACAGGAGGGCCTaGAGCCTCCCACAGACCACCCTGCAGGCCGGCCAG +
Preference number: 6 (lower is better)
Translates to: EDWLRLDLHRRA*SLPQTTLQAGQ
Trigger: CTGGCCGGCCTGCAGGGTGGTCTGTGGGAGGCTCCAGGCCCTCCTGTGCAGGTCCAAGCGCAGCCAATCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS GCA 72 bp ACAACAGGTTCCACGTTGGCCTCGTGCGGTGGCTGCTaGTCCTCCCCGTCCATGGCTGGGCGGCGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: TTGSTLASCGGC*SSPSMAGRRLP
Trigger: AGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAGCAGCCACCGCACGAGGCCAACGTGGAACCTGTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 72 bp CTGCTCCTCCCCGTCCATGGCTGGGCGGCGGCTTCCTaGACCTGTGGGGAGCACACGGAAGTCCGGACCATT +
Preference number: 6 (lower is better)
Translates to: LLLPVHGWAAAS*TCGEHTEVRTI
Trigger: AATGGTCCGGACTTCCGTGTGCTCCCCACAGGTGCAGGAAGCCGCCGCCCAGCCATGGACGGGGAGGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395827.5
CDS GCA 72 bp GCCCAGTGCTGTGTCCTTGGCCCCCTCCCCGACAGGTaGAGGACCACCCTAGCGTGCAGAGGGTCAGACCAG +
Preference number: 6 (lower is better)
Translates to: AQCCVLGPLPDR*RTTLACRGSDQ
Trigger: CTGGTCTGACCCTCTGCACGCTAGGGTGGTCCTGCACCTGTCGGGGAGGGGGCCAAGGACACAGCACTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CCA 72 bp AGGTCGGTGCTCCAGTTCTTCTCGATGCCAGGCACGTaGCCCATGCCCACGACGCCCACGACCACGGAGGGG +
Preference number: 6 (lower is better)
Translates to: RSVLQFFSMPGT*PMPTTPTTTEG
Trigger: CCCCTCCGTGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCACCGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CGACCACGGAGGGGACGCACTTCCTGGGCTCGGCTGTaGGGAAGGACAAGGGGTCAGTACCTGCTCGGGCCT +
Preference number: 6 (lower is better)
Translates to: RPRRGRTSWARL*GRTRGQYLLGP
Trigger: AGGCCCGAGCAGGTACTGACCCCTTGTCCTTCCCCACAGCCGAGCCCAGGAAGTGCGTCCCCTCCGTGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463233.1
ENST00000472677.1
CDS TCA 72 bp ACCAACTGGGTCACAGTGCGCGGCAGGTTGGGCCGCTaGCGCCGCCGCTTCAGCTTCATCTCCAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: TNWVTVRGRLGR*RRRFSFISRSR
Trigger: CCTGCTCCTGGAGATGAAGCTGAAGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 72 bp TGCTCCAGTTCTTCTCGATGCCAGGCACGTGGCCCATaGCCACGACGCCCACGACCACGGAGGGGACGCACT +
Preference number: 6 (lower is better)
Translates to: CSSSSRCQARGP*PRRPRPRRGRT
Trigger: AGTGCGTCCCCTCCGTGGTCGTGGGCGTCGTGGGCATGGGCCACGTGCCTGGCATCGAGAAGAACTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CCTCAGCCACCAACTGGGTCACAGTGCGCGGCAGGTTaGGCCGCTGACGCCGCCGCTTCAGCTTCATCTCCA +
Preference number: 6 (lower is better)
Translates to: PQPPTGSQCAAG*AADAAASASSP
Trigger: TGGAGATGAAGCTGAAGCGGCGGCGTCAGCGGCCCAACCTGCCGCGCACTGTGACCCAGTTGGTGGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 72 bp CAGTTTTTCTCTTTGTGCCGGGCCTCGGTCACCCTCTaGAGGCAGTACTGCGCGGCGGGCAGCGACAGGACC +
Preference number: 6 (lower is better)
Translates to: QFFSLCRASVTL*RQYCAAGSDRT
Trigger: GGTCCTGTCGCTGCCCGCCGCGCAGTACTGCCTGCAGAGGGTGACCGAGGCCCGGCACAAAGAGAAAAACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395829.1
CDS CCA 72 bp GCTGGCCTCCTTGAAGGCCTCCCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTCGGTGATGTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: AGLLEGLPELAT*GHAQLLGDVCR
Trigger: TCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGAGGCCTTCAAGGAGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp GCCCACCTCCTTGAAGGCCTCCCTGAACTCGCCACCTaGGGCCATGCCCAGCTGCTCGGTGATGTGTGCAGA +
Preference number: 6 (lower is better)
Translates to: AHLLEGLPELAT*GHAQLLGDVCR
Trigger: TCTGCACACATCACCGAGCAGCTGGGCATGGCCCCAGGTGGCGAGTTCAGGGAGGCCTTCAAGGAGGTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS TCA 72 bp GACGCCGCCGCTTCAGCTTCATCTCCAGGAGCAGGTTaGAGGCGTCCACGTCGGACAGGTTCTGGGGGTCTC +
Preference number: 6 (lower is better)
Translates to: DAAASASSPGAG*RRPRRTGSGGL
Trigger: GAGACCCCCAGAACCTGTCCGACGTGGACGCCTTCAACCTGCTCCTGGAGATGAAGCTGAAGCGGCGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 72 bp CCAAGCCAGCCTGACCTTCTGCCAGAAGGAGAGCGCTaGGATGGCCCTCTTGAAGGTGACGGGGATGGGTCG +
Preference number: 6 (lower is better)
Translates to: PSQPDLLPEGER*DGPLEGDGDGS
Trigger: CGACCCATCCCCGTCACCTTCAAGAGGGCCATCGCAGCGCTCTCCTTCTGGCAGAAGGTCAGGCTGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CGTCGGACAGGTTCTGGGGGTCTCCAGAAAGCACCCTaGGCACCGGCTCTGAAGCCTCTGACGGCACAACAG +
Preference number: 6 (lower is better)
Translates to: RRTGSGGLQKAP*APALKPLTAQQ
Trigger: CTGTTGTGCCGTCAGAGGCTTCAGAGCCGGTGCCCAGGGTGCTTTCTGGAGACCCCCAGAACCTGTCCGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CAA 72 bp GGCTGCACCTCCCGGATGGTCTTCACAACGTCCCTCTaGCTGTCGTCGCTGAAGTGGGCTGTCCCCACCACG +
Preference number: 6 (lower is better)
Translates to: GCTSRMVFTTSL*LSSLKWAVPTT
Trigger: CGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp GTCTTCACAACGTCCCTCTTGCTGTCGTCGCTGAAGTaGGCTGTCCCCACCACGTACACCCTGCTCCCGTCC +
Preference number: 6 (lower is better)
Translates to: VFTTSLLLSSLK*AVPTTYTLLPS
Trigger: GGACGGGAGCAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp GACGTCGCGCTCCGAGACGATGGTGCGGTGCAGGTCTaGGAACTCGCCAATCATCTCGGCCATCATCTGCTC +
Preference number: 6 (lower is better)
Translates to: DVALRDDGAVQV*ELANHLGHHLL
Trigger: GAGCAGATGATGGCCGAGATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp CCGGAGACGGACGGCGGGGGCACGGTCATGATCTCCTaGATGTTGAGGTCGGTGCTCCAGTTCTTCTCGATG +
Preference number: 6 (lower is better)
Translates to: PETDGGGTVMIS*MLRSVLQFFSM
Trigger: CATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGATCATGACCGTGCCCCCGCCGTCCGTCTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CCA 72 bp TCCTTCTGCTTGCAGCGTTCCACGTCATCCTTGCTGTaGAGAGGGATGGCTGCAGCCCCGCAGGGATGGGCA +
Preference number: 6 (lower is better)
Translates to: SFCLQRSTSSLL*RGMAAAPQGWA
Trigger: TGCCCATCCCTGCGGGGCTGCAGCCATCCCTCTCCACAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CAA 72 bp ACGGACGGCGGGGGCACGGTCATGATCTCCTGGATGTaGAGGTCGGTGCTCCAGTTCTTCTCGATGCCAGGC +
Preference number: 6 (lower is better)
Translates to: TDGGGTVMISWM*RSVLQFFSMPG
Trigger: GCCTGGCATCGAGAAGAACTGGAGCACCGACCTCAACATCCAGGAGATCATGACCGTGCCCCCGCCGTCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CAA 90 bp GCCCTCTTGAAGGTGACGGGGATGGGTCGGTCACCCAGGTGGAACTaGCAGAAAGGCACCTTGCTGGCCTCCTTGAAGGCCTCCCTGAAC +
Preference number: 6 (lower is better)
Translates to: ALLKVTGMGRSPRWN*QKGTLLASLKASLN
Trigger: GTTCAGGGAGGCCTTCAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CAA 90 bp ATCTGCTCCAGTAGGTCCTTCTGCTTGCAGCGTTCCACGTCATCCTaGCTGTGGAGAGGGATGGCTGCAGCCCCGCAGGGATGGGCAACG +
Preference number: 6 (lower is better)
Translates to: ICSSRSFCLQRSTSS*LWRGMAAAPQGWAT
Trigger: CGTTGCCCATCCCTGCGGGGCTGCAGCCATCCCTCTCCACAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS TCA 72 bp GGATGGTCTTCACAACGTCCCTCTTGCTGTCGTCGCTaGAGTGGGCTGTCCCCACCACGTACACCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GWSSQRPSCCRR*SGLSPPRTPCS
Trigger: GGAGCAGGGTGTACGTGGTGGGGACAGCCCACTTCAGCGACGACAGCAAGAGGGACGTTGTGAAGACCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp CTCTTGAAGGTGACGGGGATGGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACCTTGCTGGCCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LLKVTGMGRSPR*NLQKGTLLAWS
Trigger: GCTCCAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CCA 72 bp CTGTGGACACCGGGCAGGGACCACAGCACGTTTGTTTaGGATTTGTGGCGGAAGGAAAGGGCAGGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: LWTPGRDHSTFV*DLWRKERAGKA
Trigger: GGCCTTCCCTGCCCTTTCCTTCCGCCACAAATCCCAAACAAACGTGCTGTGGTCCCTGCCCGGTGTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CAA 72 bp AGTAGGTCCTTCTGCTTGCAGCGTTCCACGTCATCCTaGCTGTGGAGAGGGATGGCTGCAGCCCCGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SRSFCLQRSTSS*LWRGMAAAPQG
Trigger: TCCCTGCGGGGCTGCAGCCATCCCTCTCCACAGCAAGGATGACGTGGAACGCTGCAAGCAGAAGGACCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS TCA 72 bp GGGATTTGTGGCGGAAGGAAAGGGCAGGGAAGGCCTTaGGTGAGGATTGGCTGCGCTTGGACCTGCACAGGA +
Preference number: 6 (lower is better)
Translates to: GICGGRKGQGRP*VRIGCAWTCTG
Trigger: TCCTGTGCAGGTCCAAGCGCAGCCAATCCTCACTCAAGGCCTTCCCTGCCCTTTCCTTCCGCCACAAATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS GCA 72 bp CGATATTGGCAGAGCTCCACGACCACCACGTCAGGCTaGACCTCCCGGATGGTCTTCACAACGTCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: RYWQSSTTTTSG*TSRMVFTTSLL
Trigger: CAAGAGGGACGTTGTGAAGACCATCCGGGAGGTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp CTCTTGAAGGTGACGGGGATGGGTCGGTCACCCAGGTaGAACTTGCAGAAAGGCACCTTGCTGGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LLKVTGMGRSPR*NLQKGTLLASL
Trigger: CAAGGAGGCCAGCAAGGTGCCTTTCTGCAAGTTCCACCTGGGTGACCGACCCATCCCCGTCACCTTCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CAA 72 bp ACTGTGGACACCGGGCAGGGACCACAGCACGTTTGTTaGGGATTTGTGGCGGAAGGAAAGGGCAGGGAAGGC +
Preference number: 6 (lower is better)
Translates to: TVDTGQGPQHVC*GFVAEGKGREG
Trigger: GCCTTCCCTGCCCTTTCCTTCCGCCACAAATCCCAAACAAACGTGCTGTGGTCCCTGCCCGGTGTCCACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CAA 72 bp TGGCACTGTGGACACCGGGCAGGGACCACAGCACGTTaGTTTGGGATTTGTGGCGGAAGGAAAGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: WHCGHRAGTTAR*FGICGGRKGQG
Trigger: TCCCTGCCCTTTCCTTCCGCCACAAATCCCAAACAAACGTGCTGTGGTCCCTGCCCGGTGTCCACAGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472677.1
CDS CCA 72 bp GTGCTCTCGTCCATCTTCAGCATGGACACACGATATTaGCAGAGCTCCACGACCACCACGTCAGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: VLSSIFSMDTRY*QSSTTTTSGCT
Trigger: GGTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS CCA 72 bp GCATGTAGGTTAGGTAGACGTCGCGCTCCGAGACGATaGTGCGGTGCAGGTCTGGGAACTCGCCAATCATCT +
Preference number: 6 (lower is better)
Translates to: ACRLGRRRAPRR*CGAGLGTRQSS
Trigger: AGATGATTGGCGAGTTCCCAGACCTGCACCGCACCATCGTCTCGGAGCGCGACGTCTACCTAACCTACATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1
CDS CAA 72 bp CGTGCTCTCGTCCATCTTCAGCATGGACACACGATATaGGCAGAGCTCCACGACCACCACGTCAGGCTGCAC +
Preference number: 6 (lower is better)
Translates to: RALVHLQHGHTI*AELHDHHVRLH
Trigger: GTGCAGCCTGACGTGGTGGTCGTGGAGCTCTGCCAATATCGTGTGTCCATGCTGAAGATGGACGAGAGCACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
CDS GCA 72 bp AGGTCTGGGAACTCGCCAATCATCTCGGCCATCATCTaGTCCAGTAGGTCCTTCTGCTTGCAGCGTTCCACG +
Preference number: 6 (lower is better)
Translates to: RSGNSPIISAII*SSRSFCLQRST
Trigger: CGTGGAACGCTGCAAGCAGAAGGACCTACTGGAGCAGATGATGGCCGAGATGATTGGCGAGTTCCCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303434.8
ENST00000380909.9
ENST00000395827.5
ENST00000395829.1
ENST00000463233.1
ENST00000472677.1