Pregenerated sensors for TRA2A (Homo sapiens)
Ensembl gene IDs: ENSG00000164548Ensembl transcript IDs: ENST00000297071.9, ENST00000392502.8, ENST00000448549.1, ENST00000482395.1, ENST00000494255.5, ENST00000538367.5, ENST00000621813.4
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCAAACTTTCAACTACCTaGCTGTTCCATTCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLKLSTT*LFHSTP Trigger: TGGGGTGGAATGGAACAGTCAGGTAGTTGAAAGTTT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCAGACAAACCTGACATaGCTGAACTACTTCATGTGT | + |
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Preference number: 2 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLQTNLT*LNYFMC Trigger: ACACATGAAGTAGTTCAGTCATGTCAGGTTTGTCTG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| 3UTR-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGAAGAATCCACAGCTTaGGGAAATCTCAGAATTAAA | + |
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Preference number: 2 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLEESTA*GNLRIK Trigger: TTTAATTCTGAGATTTCCCCAAGCTGTGGATTCTTC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | ATCTGGATCGAGTGTAACGTCTATGAGAATGTCTCCTTGACCTCGACCTGGATTCAGGCTCCAGCAAAATaGCGCCGGCGCCGCCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: IWIECNVYENVSLTSTWIQAPAK*RRRRQK Trigger: TTTCTGGCGGCGCCGGCGCCATTTTGCTGGAGCCTG...AATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CCA 90 bp | TGGATCGAGTGTAACGTCTATGAGAATGTCTCCTTGACCTCGACCTGGATTTTGCCGCTGACTGGACCGTaGGGAAGAGGAAAGAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: WIECNVYENVSLTSTWILPLTGP*GRGKSR Trigger: CCGACTCTTTCCTCTTCCCCACGGTCCAGTCAGCGG...CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCAGGCTCCAGCAAAATaGCGCCGGCGCCGCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLQAPAK*RRRRQK Trigger: TTTCTGGCGGCGCCGGCGCCATTTTGCTGGAGCCTG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCCGCTGACTGGACCGTaGGGAAGAGGAAAGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLPLTGP*GRGKSR Trigger: CCGACTCTTTCCTCTTCCCCACGGTCCAGTCAGCGG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | TGGATCGAGTGTAACGTCTATGAGAATGTCTCCTTGACCTCGACCTGGATTTTGTCCTTGACCTCGACCTaGATTTTGATCTTGATCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WIECNVYENVSLTSTWILSLTST*ILILIE Trigger: CTCGATCAAGATCAAAATCCAGGTCGAGGTCAAGGA...CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCCGCCAGAAATCTCCTaGCCTCCTCAGAGCACGACG | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLPPEIS*PPQSTT Trigger: CGTCGTGCTCTGAGGAGGCCAGGAGATTTCTGGCGG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR TCA 90 bp | TGGATCGAGTGTAACGTCTATGAGAATGTCTCCTTGACCTCGACCTGGATTTTGGTATTCTGGTGTATATaGTCTACTTCGAGATCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WIECNVYENVSLTSTWILVFWCI*STSRSS Trigger: AGACGATCTCGAAGTAGATCATATACACCAGAATAC...CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCAAGAATCTCGACGTCTaGCACCACCTCCACCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLKNLDV*HHLHLH Trigger: GTGGAGGTGGAGGTGGTGGCAGACGTCGAGATTCTT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGCCCATGTAGATGCCTaGTGTTGGTGTGTGCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLAHVDA*CWCVRS Trigger: AGAGCGCACACACCAACACCAGGCATCTACATGGGC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTTGGAGATTTTGACTaGGAGCGAGACTCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVGDFD*ERDSLP Trigger: GGGCAGAGAGTCTCGCTCTCAGTCAAAATCTCCAAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297071.9 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGCAAGTGTTGGGATCTaGATTTGCCCTGCTGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLASVGI*ICPAAS Trigger: ACTGGCAGCAGGGCAAATCCAGATCCCAACACTTGC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTAGATGCCTGGTGTTaGTGTGTGCGCTCTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVDAWC*CVRSLG Trigger: ACCAAGAGAGCGCACACACCAACACCAGGCATCTAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCCCACCACTATGAGTTaGTCTGCCCATGTAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLPTTMS*SAHVDA Trigger: GGCATCTACATGGGCAGACCAACTCATAGTGGTGGG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGAGAGCGAGACTCTCTaGCCTCGAAGTTGTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLESETL*PRSCFP Trigger: AGGAAAACAACTTCGAGGGCAGAGAGTCTCGCTCTC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297071.9 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGATCTGGATTTGCCCTaGTGCCAGTATGTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLDLDLP*CQYVFS Trigger: GGAGAAGACATACTGGCAGCAGGGCAAATCCAGATC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTTGGGATCTGGATTTaGCCTGCTGCCAGTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVGIWI*PAASMS Trigger: AGACATACTGGCAGCAGGGCAAATCCAGATCCCAAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCACTATGAGTTGGTCTaGCCATGTAGATGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLHYELV*PCRCLV Trigger: CACCAGGCATCTACATGGGCAGACCAACTCATAGTG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTTGGAGATTTTGACTaGGAGCGAGACTCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVGDFD*ERDSTS Trigger: TGAAGTGGAGTCTCGCTCTCAGTCAAAATCTCCAAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000621813.4 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCCTGGTGTTGGTGTGTaGGCTCTCTTGGTTATAGAA | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLPGVGV*ALLVIE Trigger: TTCTATAACCAAGAGAGCGCACACACCAACACCAGG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTCCTTGACCTCGACCTaGATTTTGATCTTGATCGAG | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLSLTST*ILILIE Trigger: CTCGATCAAGATCAAAATCCAGGTCGAGGTCAAGGA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTTATCAATAGCGTCTTaGGCTGTAGGAACGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLLSIAS*AVGTRS Trigger: AGATCTCGTTCCTACAGCCCAAGACGCTATTGATAA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTATTCTGGTGTATATaGTCTACTTCGAGATCGTCT | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVFWCI*STSRSS Trigger: AGACGATCTCGAAGTAGATCATATACACCAGAATAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR TCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCATAATAAGGAGAAGGTaGTCGTCTGTATCGGTAATC | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLIIRRR*SSVSVI Trigger: GATTACCGATACAGACGATCACCTTCTCCTTATTAT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392502.8 |
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| CDS-3UTR GCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTGCTATGTGATAACCTaGTTATCCACTGTCCCAATA | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLCYVIT*LSTVPI Trigger: TATTGGGACAGTGGATAAGCAGGTTATCACATAGCA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CCA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCATTGACACCACTCAATaGTCCATATCGAGAAAATAC | + |
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Preference number: 4 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLIDTTQ*SISRKY Trigger: GTATTTTCTCGATATGGACCATTGAGTGGTGTCAAT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | ATGATCTACTTCGAGATCGTCTCCTATGAGAGTGAGAGTGGGATCTGGATCGAGACTCTGCCCTCGAAGTaGTTTTCCTCCACATCACTC | + |
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Preference number: 5 (lower is better) Translates to: MIYFEIVSYESESGIWIETLPSK*FSSTSL Trigger: GAGTGATGTGGAGGAAAACAACTTCGAGGGCAGAGT...CTCGATCCAGATCCCACTCTCACTCTCATAGGAGACGATCTCGAAGTAGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CAA 90 bp | ATCTGGATCGAGTGTAACGTCTATGAGAATGTCTCCTTGACCTCGACCTGGATTACCTCGACCTGGATTTaGATCTTGATCGAGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: IWIECNVYENVSLTSTWITSTWI*ILIENG Trigger: CCCATTCTCGATCAAGATCAAAATCCAGGTCGAGGT...AATCCAGGTCGAGGTCAAGGAGACATTCTCATAGACGTTACACTCGATCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CAA 90 bp | ATGATCTACTTCGAGATCGTCTCCTATGAGAGTGAGAGTGGGATCTGGATCGAGTATGAGAATGTCTCCTaGACCTCGACCTGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: MIYFEIVSYESESGIWIEYENVS*TSTWIL Trigger: CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATA...CTCGATCCAGATCCCACTCTCACTCTCATAGGAGACGATCTCGAAGTAGATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448549.1 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCCCCACCACTATGAGTaGGTCTGCCCATGTAGATGC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLPHHYE*VCPCRC Trigger: GCATCTACATGGGCAGACCAACTCATAGTGGTGGGG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTCTCTGCCCTCGAAGTaGTTTTCCTCCACATCACTC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLSLPSK*FSSTSL Trigger: GAGTGATGTGGAGGAAAACAACTTCGAGGGCAGAGA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000297071.9 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCCATCTGCCCTCGAAGTaGTTTTCCTCCACATCACTC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLHLPSK*FSSTSL Trigger: GAGTGATGTGGAGGAAAACAACTTCGAGGGCAGATG...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000392502.8 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCACTCTGCCCTCGAAGTaGTTTTCCTCCACATCACTC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLTLPSK*FSSTSL Trigger: GAGTGATGTGGAGGAAAACAACTTCGAGGGCAGAGT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000538367.5 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCACCTCGACCTGGATTTaGATCTTGATCGAGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLTSTWI*ILIENG Trigger: CCCATTCTCGATCAAGATCAAAATCCAGGTCGAGGT...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCGTTATCAATAGCGTCTaGGGCTGTAGGAACGAGATC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLVINSV*GCRNEI Trigger: GATCTCGTTCCTACAGCCCAAGACGCTATTGATAAC...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTATGAGAATGTCTCCTaGACCTCGACCTGGATTTTG | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLYENVS*TSTWIL Trigger: CAAAATCCAGGTCGAGGTCAAGGAGACATTCTCATA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS-3UTR CAA 90 bp | CAGATGTATTTCAAATACAGCATGTTTTACAGGAGTTCACAAGCTTTTCATCTCTGTAGGAACGAGATCTaGATCGTGATCTATATCGAC | + |
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Preference number: 5 (lower is better) Translates to: QMYFKYSMFYRSSQAFHLCRNEI*IVIYID Trigger: GTCGATATAGATCACGATCAAGATCTCGTTCCTACA...GAGATGAAAAGCTTGTGAACTCCTGTAAAACATGCTGTATTTGAAATACATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS CCA 72 bp | CCCACCACTATGAGTTGGTCTGCCCATGTAGATGCCTaGTGTTGGTGTGTGCGCTCTCTTGGTTATAGAATA | + |
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Preference number: 6 (lower is better) Translates to: PTTMSWSAHVDA*CWCVRSLGYRI Trigger: TATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGACCAACTCATAGTGGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000297071.9 ENST00000392502.8 ENST00000538367.5 ENST00000621813.4 |
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| CDS CCA 72 bp | GAACTCTTACTGAGTTGGTCTGCCCATGTAGATGCCTaGTGTTGGTGTGTGCGCTCTCTTGGTTATAGAATA | + |
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Preference number: 6 (lower is better) Translates to: ELLLSWSAHVDA*CWCVRSLGYRI Trigger: TATTCTATAACCAAGAGAGCGCACACACCAACACCAGGCATCTACATGGGCAGACCAACTCAGTAAGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494255.5 |
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| CDS CAA 72 bp | GAGAAAAGTGAGGAAGAACATCCCTTTCATGAGAAATaGCCTCCGTATCTCATTTTACTGACTCCCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: EKSEEEHPFHEK*PPYLILLTPMV Trigger: TACCATGGGAGTCAGTAAAATGAGATACGGAGGCAATTTCTCATGAAAGGGATGTTCTTCCTCACTTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482395.1 |
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| CDS CCA 72 bp | CCTCCGTATCTCATTTTACTGACTCCCATGGTATTCTaGTTTGCCTTATTCCCTACATACATAATCAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PPYLILLTPMVF*FALFPTYIIKK Trigger: CTTCTTGATTATGTATGTAGGGAATAAGGCAAACCAGAATACCATGGGAGTCAGTAAAATGAGATACGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482395.1 |
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